Metagenome Family F083011

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083011
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	67 residues
Representative Sequence	MTDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPASDKFRELCRKAFGVTK
Number of Associated Samples	81
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.34 %
% of genes near scaffold ends (potentially truncated)	12.39 %
% of genes from short scaffolds (< 2000 bps)	60.18 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.726 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.779 % of family members)
Environment Ontology (ENVO)	Unclassified (46.903 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.372 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.70% β-sheet: 14.89% Coil/Unstructured: 73.40%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF10517	DM13	46.90
PF13561	adh_short_C2	3.54
PF00378	ECH_1	3.54
PF00561	Abhydrolase_1	3.54
PF00440	TetR_N	1.77
PF00230	MIP	1.77
PF12697	Abhydrolase_6	1.77
PF06719	AraC_N	0.88
PF13185	GAF_2	0.88
PF00248	Aldo_ket_red	0.88
PF12852	Cupin_6	0.88
PF00324	AA_permease	0.88
PF00296	Bac_luciferase	0.88
PF13229	Beta_helix	0.88
PF01654	Cyt_bd_oxida_I	0.88
PF10282	Lactonase	0.88
PF00857	Isochorismatase	0.88
PF03466	LysR_substrate	0.88
PF12728	HTH_17	0.88
PF02954	HTH_8	0.88
PF11154	DUF2934	0.88
PF13305	TetR_C_33	0.88
PF00174	Oxidored_molyb	0.88
PF00578	AhpC-TSA	0.88
PF00903	Glyoxalase	0.88
PF02525	Flavodoxin_2	0.88
PF12680	SnoaL_2	0.88
PF13432	TPR_16	0.88
PF00196	GerE	0.88
PF13470	PIN_3	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	1.77
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.88
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.88
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.88
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.88
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	0.88
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.88
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.88
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.88
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.88
COG4977	Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain	Transcription [K]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.73 %
Unclassified	root	N/A	13.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.73 %
Unclassified	root	N/A	13.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.73 %
Unclassified	root	N/A	13.27 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	17.70 %
Unclassified	root	N/A	13.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.27 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.62 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.27 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.27 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.27 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.77 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.77 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.27 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.77 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.88 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.88 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.27 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.77 %
Granulicella sp. L46	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	0.88 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.88 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001131\|JGI12631J13338_1000389	All Organisms → cellular organisms → Bacteria	13760	Open in IMG/M
3300001166\|JGI12694J13545_1001410	All Organisms → cellular organisms → Bacteria	2934	Open in IMG/M
3300001175\|JGI12649J13570_1019835	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300001593\|JGI12635J15846_10002763	All Organisms → cellular organisms → Bacteria	15335	Open in IMG/M
3300002245\|JGIcombinedJ26739_100040023	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4214	Open in IMG/M
3300002245\|JGIcombinedJ26739_100296908	Not Available	1500	Open in IMG/M
3300003505\|JGIcombinedJ51221_10004689	All Organisms → cellular organisms → Bacteria	4050	Open in IMG/M
3300004152\|Ga0062386_100740653	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300005538\|Ga0070731_10294336	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300005542\|Ga0070732_10029353	All Organisms → cellular organisms → Bacteria	3128	Open in IMG/M
3300005591\|Ga0070761_10170640	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300005591\|Ga0070761_10696941	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300005602\|Ga0070762_10011379	All Organisms → cellular organisms → Bacteria	4476	Open in IMG/M
3300005602\|Ga0070762_10475908	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300005602\|Ga0070762_10480911	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005602\|Ga0070762_11281884	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300005712\|Ga0070764_10019684	All Organisms → cellular organisms → Bacteria	3361	Open in IMG/M
3300005921\|Ga0070766_10071392	All Organisms → cellular organisms → Bacteria → Acidobacteria	2000	Open in IMG/M
3300005921\|Ga0070766_10522486	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300006059\|Ga0075017_100108515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1940	Open in IMG/M
3300006176\|Ga0070765_100006794	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	7710	Open in IMG/M
3300006176\|Ga0070765_100062837	All Organisms → cellular organisms → Bacteria	3083	Open in IMG/M
3300006176\|Ga0070765_100275755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1548	Open in IMG/M
3300006176\|Ga0070765_100494063	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300006176\|Ga0070765_101240484	Not Available	704	Open in IMG/M
3300006893\|Ga0073928_10016704	All Organisms → cellular organisms → Bacteria	7859	Open in IMG/M
3300007982\|Ga0102924_1157600	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300009624\|Ga0116105_1015324	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300009759\|Ga0116101_1195944	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300010339\|Ga0074046_10008653	All Organisms → cellular organisms → Bacteria	7762	Open in IMG/M
3300011120\|Ga0150983_14320493	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300011411\|Ga0153933_1053701	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300014169\|Ga0181531_10740824	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300017948\|Ga0187847_10046433	All Organisms → cellular organisms → Bacteria → Acidobacteria	2501	Open in IMG/M
3300017948\|Ga0187847_10071031	All Organisms → cellular organisms → Bacteria	1945	Open in IMG/M
3300017988\|Ga0181520_10248538	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300018019\|Ga0187874_10331236	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300018025\|Ga0187885_10256899	Not Available	797	Open in IMG/M
3300018034\|Ga0187863_10369251	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300018035\|Ga0187875_10072225	All Organisms → cellular organisms → Bacteria	1985	Open in IMG/M
3300018038\|Ga0187855_10561112	Not Available	665	Open in IMG/M
3300018043\|Ga0187887_10020150	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4318	Open in IMG/M
3300018044\|Ga0187890_10030132	All Organisms → cellular organisms → Bacteria	3300	Open in IMG/M
3300018046\|Ga0187851_10017542	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5090	Open in IMG/M
3300020580\|Ga0210403_10237738	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300020582\|Ga0210395_10144653	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
3300020582\|Ga0210395_10172813	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300020582\|Ga0210395_10951078	Not Available	637	Open in IMG/M
3300020583\|Ga0210401_10041762	All Organisms → cellular organisms → Bacteria	4341	Open in IMG/M
3300020583\|Ga0210401_10300515	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300021168\|Ga0210406_10028249	All Organisms → cellular organisms → Bacteria	5105	Open in IMG/M
3300021170\|Ga0210400_10028599	All Organisms → cellular organisms → Bacteria	4326	Open in IMG/M
3300021170\|Ga0210400_10700519	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	833	Open in IMG/M
3300021171\|Ga0210405_10073349	All Organisms → cellular organisms → Bacteria	2696	Open in IMG/M
3300021180\|Ga0210396_10066213	All Organisms → cellular organisms → Bacteria	3292	Open in IMG/M
3300021180\|Ga0210396_10130533	All Organisms → cellular organisms → Bacteria	2264	Open in IMG/M
3300021181\|Ga0210388_10021485	All Organisms → cellular organisms → Bacteria	5236	Open in IMG/M
3300021181\|Ga0210388_10221009	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300021181\|Ga0210388_10307528	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300021181\|Ga0210388_10380730	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300021401\|Ga0210393_10003085	All Organisms → cellular organisms → Bacteria	13469	Open in IMG/M
3300021401\|Ga0210393_10025715	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4590	Open in IMG/M
3300021401\|Ga0210393_10984359	Not Available	683	Open in IMG/M
3300021402\|Ga0210385_10643777	Not Available	809	Open in IMG/M
3300021404\|Ga0210389_10271015	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300021405\|Ga0210387_10044133	All Organisms → cellular organisms → Bacteria	3567	Open in IMG/M
3300021407\|Ga0210383_10008340	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8949	Open in IMG/M
3300021407\|Ga0210383_10439183	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300021433\|Ga0210391_10132443	All Organisms → cellular organisms → Bacteria	1962	Open in IMG/M
3300021474\|Ga0210390_10000076	All Organisms → cellular organisms → Bacteria	98077	Open in IMG/M
3300021474\|Ga0210390_10421830	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	1127	Open in IMG/M
3300021477\|Ga0210398_10853325	Not Available	731	Open in IMG/M
3300022557\|Ga0212123_10088097	All Organisms → cellular organisms → Bacteria	2586	Open in IMG/M
3300024227\|Ga0228598_1073191	Not Available	685	Open in IMG/M
3300025134\|Ga0207416_1134303	Not Available	842	Open in IMG/M
3300025320\|Ga0209171_10079475	All Organisms → cellular organisms → Bacteria	2065	Open in IMG/M
3300025414\|Ga0208935_1009234	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300027109\|Ga0208603_1018820	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300027567\|Ga0209115_1032156	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300027590\|Ga0209116_1019533	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300027619\|Ga0209330_1000612	All Organisms → cellular organisms → Bacteria	13684	Open in IMG/M
3300027652\|Ga0209007_1000787	All Organisms → cellular organisms → Bacteria	10560	Open in IMG/M
3300027652\|Ga0209007_1139388	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300027684\|Ga0209626_1161955	Not Available	592	Open in IMG/M
3300027701\|Ga0209447_10136711	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300027729\|Ga0209248_10005101	All Organisms → cellular organisms → Bacteria	4163	Open in IMG/M
3300027783\|Ga0209448_10003538	All Organisms → cellular organisms → Bacteria → Acidobacteria	4830	Open in IMG/M
3300027825\|Ga0209039_10309911	Not Available	620	Open in IMG/M
3300027842\|Ga0209580_10070150	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300027853\|Ga0209274_10063730	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300027884\|Ga0209275_10023937	All Organisms → cellular organisms → Bacteria	2760	Open in IMG/M
3300027889\|Ga0209380_10683065	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300027889\|Ga0209380_10811770	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300027908\|Ga0209006_10098569	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	2592	Open in IMG/M
3300028906\|Ga0308309_10015620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4871	Open in IMG/M
3300028906\|Ga0308309_10462730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1093	Open in IMG/M
3300028906\|Ga0308309_11258328	Not Available	637	Open in IMG/M
3300031234\|Ga0302325_10189152	All Organisms → cellular organisms → Bacteria → Proteobacteria	3573	Open in IMG/M
3300031234\|Ga0302325_11646355	Not Available	815	Open in IMG/M
3300031236\|Ga0302324_102309136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300031525\|Ga0302326_10712833	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300031525\|Ga0302326_11781891	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300031715\|Ga0307476_10008535	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	6309	Open in IMG/M
3300031718\|Ga0307474_10000412	All Organisms → cellular organisms → Bacteria → Acidobacteria	30818	Open in IMG/M
3300031718\|Ga0307474_10738127	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300031718\|Ga0307474_10854356	Not Available	720	Open in IMG/M
3300031823\|Ga0307478_10002952	All Organisms → cellular organisms → Bacteria	12977	Open in IMG/M
3300032805\|Ga0335078_10641680	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1330	Open in IMG/M
3300032895\|Ga0335074_10011830	All Organisms → cellular organisms → Bacteria	12210	Open in IMG/M
3300032895\|Ga0335074_10144601	All Organisms → cellular organisms → Bacteria	3023	Open in IMG/M
3300032896\|Ga0335075_10468079	All Organisms → cellular organisms → Bacteria → Acidobacteria	1304	Open in IMG/M
3300033134\|Ga0335073_11366631	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300033829\|Ga0334854_009665	All Organisms → cellular organisms → Bacteria	2347	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.23%
Host-Associated	Host-Associated	1.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.22%
Aquatic	Environmental → Aquatic	23.01%
Plants	Host-Associated → Plants	0.89%
Fungi	Host-Associated → Fungi	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.91%
Freshwater	Environmental → Aquatic → Freshwater	17.70%
Peat	Environmental → Terrestrial → Peat	5.31%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.42%
Sediment	Environmental → Aquatic → Sediment	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.89%
Mycelium	Host-Associated → Fungi → Mycelium	0.89%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	32.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.31%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	4.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	32.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.20%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.04%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.31%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	4.42%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.78%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	18.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	14.16%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.42%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	4.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.42%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.42%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.42%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.77%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.89%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001131	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1	Environmental	Open in IMG/M
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011411	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ017 MetaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025134	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG (SPAdes)	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12631J13338_10003893	3300001131	Forest Soil	MTDELVEISGKSGPDVVWRPGTNGELVVAAPCGGLPFEVPYQDVKRWKPAGDEFRKQALPSE*
JGI12694J13545_10014102	3300001166	Forest Soil	MTDELVEVSGKSGPHVVWRPGTNGELVVAAPCGGLPFEVLYQDVKRWKPAGDES*
JGI12649J13570_10198352	3300001175	Forest Soil	MVESPFMTDELVEISGKSGPDVVWRPGTNGELVVAAPCGGLPFEVPYQDVKRWKPAGDEFRKQALPSE*
JGI12635J15846_100027638	3300001593	Forest Soil	MIDELVEVPGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPAGDKFRELCQTAFRGVTK*
JGIcombinedJ26739_1000400236	3300002245	Forest Soil	MIDELVEVSGKSGPHVVWRPGTNGELVVASPSGGLPFEVPYQDVKRWNPAGDKFRELCGKAFRGITK*
JGIcombinedJ26739_1002969081	3300002245	Forest Soil	MTDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWKPAGDKF*
JGIcombinedJ51221_100046892	3300003505	Forest Soil	MTDELVEVSGKSGPHVVWRPGTNGELVVAATSGGLPFEVPYQDVKRWKPAADEFQEFSRRELRGVTK*
Ga0062386_1007406532	3300004152	Bog Forest Soil	MTDELVEVSGKSGPHVVWRPGTNGELVVAAASGGLPFEVPYQDVKRWNPTGDKFRELCRKAFGVTK*
Ga0070731_102943362	3300005538	Surface Soil	MVEPPFMTDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPADDKFGKVCQKAFRGVTR*
Ga0070732_100293534	3300005542	Surface Soil	MIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPAGDKFRELCRKAFRGVTR*
Ga0070761_101706403	3300005591	Soil	MTDELVEVSGKSGPHVVWRPGTNGELVVAALSGGLPFEVPYQDVKRWNAAGDKLRELCGKAFRGVTK*
Ga0070761_106969412	3300005591	Soil	MVEPPFMIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPCQDVKRWNLRGDKFGELCRKAIQGTKQKGEFHATSE*
Ga0070762_100113794	3300005602	Soil	MTDELVEVSGKSGPHVVWRPGTNGELVVAAPAGGLPFEVPYRDIKRWDPAGDKFRELCRKPLSGVTK*
Ga0070762_104759082	3300005602	Soil	MVESPFMTDELVEISGKSGPHVVWRPGTNGELVVAAPCGGLPFEVPYQDVKRWKPAGDEF
Ga0070762_104809111	3300005602	Soil	MVESPFMTDELVEVSGKSGPHVVWRPGTNGELVVAATSGGLPSEVPYQDVKRWKPAADEFQEFSRRELRGVTK*
Ga0070762_112818841	3300005602	Soil	LFMTDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVSYQDVKRWNPAGD*
Ga0070764_100196842	3300005712	Soil	MVESPFMTDELVEISGKSGPHVVWRPGTNGEPVVAAPCGGLPFEVPYQDVKRWKPAADEFREFSRRELRGVTK*
Ga0070766_100713924	3300005921	Soil	MVESPFMTDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEIPYHDVKRWNPAGDEFRALPSVTT*
Ga0070766_105224862	3300005921	Soil	MVEPPFMIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVLCQDVKRWNLRGDKFGELCRKAIQGTKQKGEFHATSE*
Ga0075017_1001085154	3300006059	Watersheds	MTDELVEVSGKSGPYVVWRPGTNGELVVAAPSGGLPFEVPNQDVKRWNPAGDKFRELCGKAFRGITK*
Ga0070765_1000067949	3300006176	Soil	MTDELVEVSGKSGPHVVWRPGTNEEPVVAAPSGGPPFEVPYQDVKRWNPAGDKFRE
Ga0070765_1000628371	3300006176	Soil	MTDELVEVSGKSGPHVVGRPGTNGELVVAAASGGLPFEIPYQDVKRWNPAGDKFRELC
Ga0070765_1002757552	3300006176	Soil	MVESPFMTDELVEISGKSGPHVVWRPGTNGELVVAAPCGGLPFEVPYQDVKRWKPAGDEFQEFSRRELRGVTK*
Ga0070765_1004940632	3300006176	Soil	MVESPFMTDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEIPYHDVKRWNPAGDEFRALPSVTK*
Ga0070765_1012404842	3300006176	Soil	MVDPPFMTDELVEVSGRSGPHVVWRPGTNGELVVAAPCGGLPFEVPYRDVKRWNSADDKFRELSGKPFRGVTK*
Ga0073928_100167042	3300006893	Iron-Sulfur Acid Spring	MIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPAGNKFRELC*
Ga0102924_11576002	3300007982	Iron-Sulfur Acid Spring	MVEPPFMIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPFQDVKRWNPAGDKFRELC*
Ga0116105_10153242	3300009624	Peatland	MVEPPFMIDELIEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPAGNKFRELYR*
Ga0116101_11959441	3300009759	Peatland	MVESPFMTDELVEVSGKSGPHVVWRPGTNEELVVAAPSGGLPFEVPYQDVKRWNP
Ga0074046_100086536	3300010339	Bog Forest Soil	MHLISKVEPPFMTDELVEVSGKSGPHVVWRPGTNGELVVAAASGGLPFEVPYQDVKRWNPTGDKFRELCRKAFGVTK*
Ga0150983_143204931	3300011120	Forest Soil	MVESPFMTDELVEISGKSGPHVVWRPGTNGEPVVAAPCGGLPFEVPYQDVKRWKPAADEFQEFSRRELRGVTK*
Ga0153933_10537013	3300011411	Attine Ant Fungus Gardens	MVESPFMTDELVEVLGKSGPHVVWRPGTNGELVVAAPSGGFPFEVPYQDVKRWNPA
Ga0181531_107408242	3300014169	Bog	MVEPPFMTDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPAGDKFRKLCRKAFRGATK*
Ga0187847_100464335	3300017948	Peatland	MTDELVEVSGKSGPHVVWRPGTNAELVVAAASGGLPFEVPYQDVRRWKPAGDKSKGWKIVKFTEAP
Ga0187847_100710312	3300017948	Peatland	MTDELVEVSGKSGPHVVWRPGTNEELVVAAPSGGLPFEVPYQDVKRWNPAADEFRSRSPG
Ga0181520_102485383	3300017988	Bog	MIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPAGDKFRELCRKAFRGATK
Ga0187874_103312361	3300018019	Peatland	MVEPPFMIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPAGNKFRELYR
Ga0187885_102568991	3300018025	Peatland	FMIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPAGNKFRELYR
Ga0187863_103692512	3300018034	Peatland	MVESPFMTDELVEISGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPAGDKFRELCRKAFRGATK
Ga0187875_100722252	3300018035	Peatland	MIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGDLPFEVPYQDVKRWNPAGNKFRELYR
Ga0187855_105611121	3300018038	Peatland	MVEPPFMTDELVEVSGKSGPHVVWRPGTNAELVVAAASGGLPFEVPYQDVRRWKPAGDKSKGWKIVKFTEAP
Ga0187887_100201501	3300018043	Peatland	MIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPAGNKFRELYR
Ga0187890_100301323	3300018044	Peatland	MIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGDLPFEVPYQDVKRWNPAGNKFRELYRKAFRGVTK
Ga0187851_100175422	3300018046	Peatland	MIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPAGNKFRELYRKAFRGVTK
Ga0210403_102377382	3300020580	Soil	MTDELVEISGKSGPHVVWRPGTNGELVVAAPCGGLPFEVPYQDVKRWKPAGDEFQGFSRRELRGVTK
Ga0210395_101446532	3300020582	Soil	MTDELVEISGKSGPHVVWRPGTNGELVVAGPRGGLPFEVPYQDVKRWKPNAERQALTRS
Ga0210395_101728132	3300020582	Soil	MTDELVEISGKSGPHVVWRPGTNGEPVVAAPCGGLPFEVPYQDVKRWKPAADEFREFSRRELRGVTK
Ga0210395_109510782	3300020582	Soil	ESPFMTDELVEISGKSGPHVVWRPGTNGELVVAAPCGGLPFEVPYQDVKRWKPAGDEFQEFSRRELRGVTK
Ga0210401_100417621	3300020583	Soil	MTDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPACDKFRKLCRKAFRGVTK
Ga0210401_103005151	3300020583	Soil	MADPPFMTDELVEVSGKSGPHVVWRPGTNGELVVAARCGGLPFEVPYQDVKRWKPEGDEFREFPRRELRGVTK
Ga0210406_100282494	3300021168	Soil	MTDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPASDKFRELCRKAFGVTK
Ga0210400_100285994	3300021170	Soil	MTGELVEISGKSGPHVVWRPGTNGELVVAGPRGGLPFEVPYQDVKRWKSNAERQALTRS
Ga0210400_107005192	3300021170	Soil	MVESPFMTDELVEISGKSGPHVVWRPGTNGELVVAAPCGGLPFEVPYQDVKRWKPAGDEFQEFSRRELRGVTK
Ga0210405_100733494	3300021171	Soil	MTDELVEVSGKSGPHVVWRPGTNGELVVAATSGGLPFEVPYQDVKRWKPAADEFQEFSRRELRGVTK
Ga0210396_100662135	3300021180	Soil	MTDDLVEVSGKSGPYIVWRPGTNGELVVAEPCGGLPFEVPYQDIKRWNPAGDRFREHCRKAFGVTT
Ga0210396_101305334	3300021180	Soil	MVEPPFMTDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPACDKFRKLCRKAFRGVTK
Ga0210388_100214853	3300021181	Soil	MTDELVEVFGKSGPHVVWRSGTNGELVVAAPCGGLPFEVPYQEVMRWKPAGDEFQEFSRGEVGGVTK
Ga0210388_102210092	3300021181	Soil	MVEPSFMTDELVEVSGKSGPHVVWRPGTNGELVVAAPAGGLPFEVPYRDIKRWDPAGDKFRELCRKPLSGVTK
Ga0210388_103075282	3300021181	Soil	MTDELVEISGKSGPHVVWRPGTNGEPVVAAPCGGLPFEVPYQDVKRWKPAADEFQEFSRRELRGVTK
Ga0210388_103807301	3300021181	Soil	MTDELVEISGKSGPHVVWRPGTNGELVVAAPCGGLPFEVPYQDVKRWKPAGDEF
Ga0210393_1000308517	3300021401	Soil	MTDDLVEVSGKPGPCVVWRPGTNGELVVAEPCGGLPFGVPYQDVKRWNPAGDGFGELCRKAFGVTT
Ga0210393_100257152	3300021401	Soil	MTDELVEISGKSGPHVVWRPGTNGELVVAAPCGGLPFEVPYQDVKRWKPAGDEFQEFSRRELRGVTK
Ga0210393_109843591	3300021401	Soil	MIEPPFMTDDLVEVSGKSGPYIVWRPGTNGELVVAEPCGGLPFEVPYQDIKRWNPAGDRFREHCRKAFGVTT
Ga0210385_106437772	3300021402	Soil	MVDSPFMTDELVEISEKSGPHVVWRPGTNGELVVAAPCGGLPFEVPYQDVKRWKPAADEFQEFSRRELRGVTK
Ga0210389_102710152	3300021404	Soil	MVESPFMTDELVEISGKSGPHVVWRPGTNGEPVVAAPCGGLPFEVPYQDVKRWKPAADEFQEFSRRELRGVTK
Ga0210387_100441333	3300021405	Soil	MTDDLVEVSGKPGPYVAWRPGTNGELVVAEPCGGLPFEVPYQDIKRWNPAGDRFREHCRKAFGVTT
Ga0210383_100083408	3300021407	Soil	MTDELVEVSGKSGPHVVWRPGTNGELVVAAPAGGLPFEVPYRDIKRWDPAGDKFRELCRKPLSGVTK
Ga0210383_104391832	3300021407	Soil	MIDELVEVLGKSGPHIVWRPGTNGELVVAALSGGLPFEVPYQDVKRWNPAGDKVKELCRKAFRGVTECR
Ga0210391_101324433	3300021433	Soil	MTDELVEISEKSGPHVVWRPGTNGELVVAAPCGGLPFEVPYQDVKRWKPAADEFQEFSRRELRGVTK
Ga0210390_1000007646	3300021474	Soil	MIYELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKKWNPAGDKFRELCRKAFRGITK
Ga0210390_104218304	3300021474	Soil	MGEPPFITDELVEVSGKSGPHVVWKPGTNGELVVAAPCGGLPFEVPYQDVKRWNPAGDKFRELCGKVFHGVTK
Ga0210398_108533252	3300021477	Soil	PSFMTDELVEVSGKSGPHVVWRPGTNGELVVAAPAGGLPFEVPYRDIKRWDPAGDKFRELCRKPLSGVTK
Ga0212123_100880972	3300022557	Iron-Sulfur Acid Spring	MIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPFQDVKRWNPAGDKFRELC
Ga0228598_10731911	3300024227	Rhizosphere	MVESPFMTDELVEVSGKSGPHVVWRPGTNGELVVAASCGGLPFEVPYRDVKRWNPTGDEFRGLCRKAFGVTK
Ga0207416_11343031	3300025134	Iron-Sulfur Acid Spring	MVEPPFMIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPFQDVKRWNPAGDKFRELC
Ga0209171_100794751	3300025320	Iron-Sulfur Acid Spring	MIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPAGNKFRELC
Ga0208935_10092342	3300025414	Peatland	MVEPPFMIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPAGNKFRELYRKAFRGVTK
Ga0208603_10188203	3300027109	Forest Soil	MIDELVEVSGESGPHVVWRPGTNGELVVAAPSGGLPFAVPYQDVKRWNSAGDKFRELCRKAF
Ga0209115_10321561	3300027567	Forest Soil	MVEPPFMIDELVEVSGKSGPHVVWRPGTNGELVVASPSGGLPFEVPYQDVKRWNPAGDKFRELCGKAFRGITK
Ga0209116_10195332	3300027590	Forest Soil	MTDELVEISGKSGPDVVWRPGTNGELVVAAPCGGLPFEVPYQDVKRWKPAGDEFRKQALPSE
Ga0209330_10006124	3300027619	Forest Soil	MIDELVEVSGKSGPHVVWRPGTNGELVVASPSGGLPFEVPYQDVKRWNPAGDKFRELCGKAFRGITK
Ga0209007_10007878	3300027652	Forest Soil	MTDELVEVSGKSGPHVVWRPGTNGELVVAAPCGGLPFEVLYQDVKRWKPAGDES
Ga0209007_11393881	3300027652	Forest Soil	MIDELVEVPGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPAGDKFRELCQT
Ga0209626_11619551	3300027684	Forest Soil	MVEPPFMTDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWKPAGDKF
Ga0209447_101367112	3300027701	Bog Forest Soil	MVELPFMTDELVEVSGKSGPHVVWRPGTNGELVVAAPCGGIPFEVPYQDVKRWNPAGDKSESSAKRYSAAS
Ga0209248_100051014	3300027729	Bog Forest Soil	MIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPAGDKFRELPEGTSRRRQF
Ga0209448_100035385	3300027783	Bog Forest Soil	MTDELVEVSGKSGPHVVWRPGTNGELVVAAPCGGGPFGVPYQDVKRWNPAGDKFRELCGTAFRGVTK
Ga0209039_103099111	3300027825	Bog Forest Soil	MTDELVEVSGKSGPHVVWRPGTNGELVVAAASGGLPFEVPYQDVKRWNPTGDKFRELCRKAFGVTK
Ga0209580_100701503	3300027842	Surface Soil	MVEPPFMIDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEVPYQDVKRWNPAGDKFRELCRKAFRGVTR
Ga0209274_100637304	3300027853	Soil	MTDELVEILGKSGPHVVWRPGTNGELVVAAPCGGLPFEVPYQDVKRWKPAADEFQEFSRRELRGVTK
Ga0209275_100239373	3300027884	Soil	MTDELVEVSGKSGPHVVWRPGTNGELVVAATSGGLPSEVPYQDVKRWKPAADEFQEFSRRELRGVTK
Ga0209380_106830652	3300027889	Soil	MVESPFMTDELVEISGKSGPHVVWRPGTNGEPVVAAPCGGLPFEVPYQDVKRWKPAADEFREFSRRELRGV
Ga0209380_108117702	3300027889	Soil	MVESPFMTDELVEVSGKSGPHVVWRPGTNGELVVAAPSGGLPFEIPYHDVKRWNPAGDEFRALPSVTT
Ga0209006_100985693	3300027908	Forest Soil	PFMIDELVEVSGKSGPHVVWRPGTNGELVVASPSGGLPFEVPYQDVKRWNPAGDKFRELCGKAFRGITK
Ga0308309_100156201	3300028906	Soil	MTDELVEVSGKSGPHVVGRPGTNGELVVAAASGGLPFEIPYQDVKRWNPAGDKFRELCGKAFRGITK
Ga0308309_104627302	3300028906	Soil	MVESPFMTDELVEVSGKSGPHVVWRPGTNGELVVAATSGGLPFEVPYQDVKRWKPAADEFQEFSRRELRGVTK
Ga0308309_112583282	3300028906	Soil	MVDPPFMTDELVEVSGRSGPHVVWRPGTNGELVVAAPCGGLPFEVPYRDVKRWNSADDKFRELSGKPFRGVTK
Ga0302325_101891523	3300031234	Palsa	MVEPPFMTDELVEVSGKSGPHVVWRPGTNGELVVASSYGGLPFEVPYQDVKRWKPAVDKFSGGIPDVGLGDRAAF
Ga0302325_116463552	3300031234	Palsa	PFMTDELVEVSGKSGPHVVWRPGTNAELVVAAPSGGLPFEVPSQDVKRWNPAGDKFRELCRQAFRGVTK
Ga0302324_1023091361	3300031236	Palsa	MVEPPFMTDELVEVSGKSGPHVVWRPGTNAELVVAAPSGGLPFEVPSQDVKRWNPAGDKFRELCRQAFRGVTK
Ga0302326_107128332	3300031525	Palsa	MTDELVEVSGKSGPHVVWRPGTNAELVVAAPSGGLPFEVPSQDVKRWNPAGDKFRELCRQAFRGVTK
Ga0302326_117818912	3300031525	Palsa	MVDPPFMTDELVEVSGKSGPHVVWRPGTNGELVVAEPCGGLPFEVPYQDIKRWKPAGDKFRELCRKAFRGVTK
Ga0307476_100085355	3300031715	Hardwood Forest Soil	MIDELVEVSGKSGPHVVWRPGTNGELVVAATSGGLPFEVPYQDVKRWNPRPMSSELCLKSFRGVTK
Ga0307474_100004125	3300031718	Hardwood Forest Soil	MTDELVEVSGKSGPHVVWRPGTNGELVVAEPRGGLPFEVPYRDVERWNPAGHKYREEPLPSE
Ga0307474_107381271	3300031718	Hardwood Forest Soil	MVEPPFRTDDLVEVSGKSGPYVVWRSGTNGELVVAKPCGGLPFEVPYQDVKRWTPAGDKFRELSRKNRGHPSGIID
Ga0307474_108543564	3300031718	Hardwood Forest Soil	QMVESPFMTGELVEISGKSGPHVVWRPGTNGELVVAGPRGGLPFEVPYQDVKRWKSNAERQALTRS
Ga0307478_1000295215	3300031823	Hardwood Forest Soil	MIDELVEVSGKSGPHVVWRPGTNGELVVAAPFGGLPFEVPYQDVKRWNPAGDKFRELCRKAFRNVTK
Ga0335078_106416801	3300032805	Soil	MTDELVEVSGKSGPHVVWRPGTNAELVVAAASGGLPFEVPYQDVRRWKPAGNKSKGWKIVKFTEAP
Ga0335074_1001183012	3300032895	Soil	MIDDLVEVSGKSGPHVVWRPGTNGELVVAATSGGLPIEVPYQDVRRWKPAGDKSKGWKIVNFTEAP
Ga0335074_101446013	3300032895	Soil	MTDELVEVSGKSGPHVVWRPGTNAELVVAAASGGLPFEVPYQDVRRWKPAGDKSKGWKIVSFTKAP
Ga0335075_104680792	3300032896	Soil	MVEPPFMIDDLVEVSGKSGPHVVWRPGTNGELVVAATSGGLPIEVPYQDVRRWKPAGDKSKGWKIVNFTEAP
Ga0335073_113666311	3300033134	Soil	MVEPPFMTDELVEVSGKSGPHVVWRPGTNAELVVAAASGGLPFEVPYQDVRRWKPAGDKSKGWKIVSFTKAP
Ga0334854_009665_76_303	3300033829	Soil	MVDPPFMTDELVEVSGKSGPHVVWRPGTNGELVVASSYGGLPFEVPYQDVKRWKPAVDKFSGGIPDVGLGDRAAF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083011

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences