Metagenome / Metatranscriptome Family F083000

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083000
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	74 residues
Representative Sequence	MDYQLIIKTDERGQPRIDGYTGQLPPAATFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDAQAPH
Number of Associated Samples	87
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.73 %
% of genes near scaffold ends (potentially truncated)	28.32 %
% of genes from short scaffolds (< 2000 bps)	73.45 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.646 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.248 % of family members)
Environment Ontology (ENVO)	Unclassified (27.434 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (50.442 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 31.07% Coil/Unstructured: 68.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00296	Bac_luciferase	13.27
PF00196	GerE	10.62
PF10604	Polyketide_cyc2	4.42
PF07516	SecA_SW	2.65
PF04075	F420H2_quin_red	1.77
PF05221	AdoHcyase	1.77
PF00809	Pterin_bind	1.77
PF03466	LysR_substrate	1.77
PF00576	Transthyretin	0.88
PF00717	Peptidase_S24	0.88
PF16859	TetR_C_11	0.88
PF13649	Methyltransf_25	0.88
PF01872	RibD_C	0.88
PF02687	FtsX	0.88
PF08240	ADH_N	0.88
PF00291	PALP	0.88
PF07517	SecA_DEAD	0.88
PF01370	Epimerase	0.88
PF01425	Amidase	0.88
PF03807	F420_oxidored	0.88
PF00561	Abhydrolase_1	0.88
PF00158	Sigma54_activat	0.88
PF05988	DUF899	0.88
PF00067	p450	0.88
PF04978	DUF664	0.88
PF04069	OpuAC	0.88
PF03060	NMO	0.88
PF03626	COX4_pro	0.88
PF00440	TetR_N	0.88
PF13556	HTH_30	0.88
PF13183	Fer4_8	0.88
PF08281	Sigma70_r4_2	0.88
PF03551	PadR	0.88
PF00106	adh_short	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	13.27
COG0653	Preprotein translocase subunit SecA (ATPase, RNA helicase)	Intracellular trafficking, secretion, and vesicular transport [U]	3.54
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	1.77
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.88
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.88
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.88
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.88
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.88
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.88
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.88
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.88
COG2124	Cytochrome P450	Defense mechanisms [V]	0.88
COG2351	5-hydroxyisourate hydrolase (purine catabolism), transthyretin-related family	Nucleotide transport and metabolism [F]	0.88
COG3125	Heme/copper-type cytochrome/quinol oxidase, subunit 4	Energy production and conversion [C]	0.88
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.65 %
Unclassified	root	N/A	20.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.65 %
Unclassified	root	N/A	20.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.65 %
Unclassified	root	N/A	20.35 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	65.49 %
Unclassified	root	N/A	20.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	59.29 %
Unclassified	root	N/A	20.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	46.02 %
Unclassified	root	N/A	20.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.35 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	10.62 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.54 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.65 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.88 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.88 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.88 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.35 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	10.62 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.65 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.77 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.88 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.88 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.88 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.88 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.35 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	10.62 %
Prauserella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Prauserella	1.77 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.77 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.88 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.88 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.88 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.88 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.88 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.88 %
Kineococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus	0.88 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.35 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	7.96 %
Prauserella salsuginis group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Prauserella → Prauserella salsuginis group	1.77 %
Actinomadura bangladeshensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura bangladeshensis	1.77 %
Kineococcus siccus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus → Kineococcus siccus	0.88 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.88 %
unclassified Actinoplanes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes	0.88 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.88 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.88 %
Kribbella qitaiheensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella qitaiheensis	0.88 %
Microbacterium azadirachtae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium azadirachtae	0.88 %
Streptomyces brasiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces brasiliensis	0.88 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.35 %
Streptomyces sp. yr375	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. yr375	7.96 %
Prauserella sediminis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Prauserella → Prauserella salsuginis group → Prauserella sediminis	1.77 %
Actinomadura bangladeshensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura bangladeshensis	1.77 %
Pseudonocardia sp. DSM 110487	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. DSM 110487	0.88 %
Actinoplanes sp. TBRC 11911	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes → Actinoplanes sp. TBRC 11911	0.88 %
Frankia sp. ACN1ag	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. ACN1ag	0.88 %
Kineococcus siccus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus → Kineococcus siccus	0.88 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.88 %
Kribbella qitaiheensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella qitaiheensis	0.88 %
Microbacterium azadirachtae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium azadirachtae	0.88 %
Streptomyces brasiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces brasiliensis	0.88 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10085491	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1243	Open in IMG/M
3300004152\|Ga0062386_100007431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7683	Open in IMG/M
3300004152\|Ga0062386_100025081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4386	Open in IMG/M
3300005434\|Ga0070709_10003786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8134	Open in IMG/M
3300005437\|Ga0070710_10008446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5013	Open in IMG/M
3300005439\|Ga0070711_101093809	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300005610\|Ga0070763_10311769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	867	Open in IMG/M
3300005712\|Ga0070764_10084174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1678	Open in IMG/M
3300005921\|Ga0070766_10327593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	989	Open in IMG/M
3300006176\|Ga0070765_100071548	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2912	Open in IMG/M
3300006806\|Ga0079220_11074295	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300010048\|Ga0126373_11000161	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300010048\|Ga0126373_11086931	Not Available	866	Open in IMG/M
3300010379\|Ga0136449_101174862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. yr375	1212	Open in IMG/M
3300010937\|Ga0137776_1288330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1054	Open in IMG/M
3300016270\|Ga0182036_10829389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Prauserella → Prauserella salsuginis group → Prauserella sediminis	755	Open in IMG/M
3300017821\|Ga0187812_1000322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17335	Open in IMG/M
3300017926\|Ga0187807_1003504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4814	Open in IMG/M
3300017926\|Ga0187807_1292724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. DSM 110487	540	Open in IMG/M
3300017937\|Ga0187809_10237423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. yr375	656	Open in IMG/M
3300017937\|Ga0187809_10244306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. yr375	648	Open in IMG/M
3300017994\|Ga0187822_10174453	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300020579\|Ga0210407_10931714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. yr375	665	Open in IMG/M
3300020581\|Ga0210399_11259056	Not Available	584	Open in IMG/M
3300020582\|Ga0210395_10302602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1202	Open in IMG/M
3300020582\|Ga0210395_10650782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	789	Open in IMG/M
3300020583\|Ga0210401_10451866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1147	Open in IMG/M
3300021088\|Ga0210404_10036329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2242	Open in IMG/M
3300021171\|Ga0210405_11092556	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300021178\|Ga0210408_10119202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2080	Open in IMG/M
3300021180\|Ga0210396_11340472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. ACN1ag	594	Open in IMG/M
3300021388\|Ga0213875_10458318	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300021402\|Ga0210385_10479741	All Organisms → cellular organisms → Bacteria → Terrabacteria group	941	Open in IMG/M
3300021403\|Ga0210397_11625828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. yr375	501	Open in IMG/M
3300021405\|Ga0210387_10453544	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1138	Open in IMG/M
3300021406\|Ga0210386_10134167	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2058	Open in IMG/M
3300021420\|Ga0210394_10399282	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1209	Open in IMG/M
3300021432\|Ga0210384_11139835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	684	Open in IMG/M
3300021433\|Ga0210391_10715588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces brasiliensis	784	Open in IMG/M
3300021474\|Ga0210390_10117457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2227	Open in IMG/M
3300021475\|Ga0210392_10113370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1804	Open in IMG/M
3300021478\|Ga0210402_11488513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. yr375	604	Open in IMG/M
3300021560\|Ga0126371_10220218	Not Available	2002	Open in IMG/M
3300022527\|Ga0242664_1146603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	518	Open in IMG/M
3300022529\|Ga0242668_1133585	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300022718\|Ga0242675_1019764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	933	Open in IMG/M
3300025929\|Ga0207664_10526100	Not Available	1060	Open in IMG/M
3300027505\|Ga0209218_1132945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes → Actinoplanes sp. TBRC 11911	525	Open in IMG/M
3300027812\|Ga0209656_10044202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2558	Open in IMG/M
3300027812\|Ga0209656_10142078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	1212	Open in IMG/M
3300027889\|Ga0209380_10010706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5324	Open in IMG/M
3300027895\|Ga0209624_11014597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300030763\|Ga0265763_1042168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	553	Open in IMG/M
3300031543\|Ga0318516_10111749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura bangladeshensis	1551	Open in IMG/M
3300031544\|Ga0318534_10019123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3607	Open in IMG/M
3300031544\|Ga0318534_10359255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	838	Open in IMG/M
3300031546\|Ga0318538_10252610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Prauserella → Prauserella salsuginis group → Prauserella sediminis	947	Open in IMG/M
3300031564\|Ga0318573_10711605	Not Available	540	Open in IMG/M
3300031573\|Ga0310915_10919704	Not Available	612	Open in IMG/M
3300031640\|Ga0318555_10213844	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300031640\|Ga0318555_10311479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	852	Open in IMG/M
3300031708\|Ga0310686_109985731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. yr375	711	Open in IMG/M
3300031715\|Ga0307476_10523841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	878	Open in IMG/M
3300031736\|Ga0318501_10305974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	849	Open in IMG/M
3300031751\|Ga0318494_10608053	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300031751\|Ga0318494_10949566	Not Available	505	Open in IMG/M
3300031765\|Ga0318554_10329813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	868	Open in IMG/M
3300031770\|Ga0318521_10644125	Not Available	642	Open in IMG/M
3300031778\|Ga0318498_10403307	Not Available	608	Open in IMG/M
3300031781\|Ga0318547_11089493	Not Available	500	Open in IMG/M
3300031782\|Ga0318552_10444113	Not Available	662	Open in IMG/M
3300031795\|Ga0318557_10560043	Not Available	525	Open in IMG/M
3300031796\|Ga0318576_10104026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura bangladeshensis	1298	Open in IMG/M
3300031799\|Ga0318565_10373552	Not Available	691	Open in IMG/M
3300031805\|Ga0318497_10771351	Not Available	539	Open in IMG/M
3300031823\|Ga0307478_10009446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6689	Open in IMG/M
3300031845\|Ga0318511_10511551	Not Available	556	Open in IMG/M
3300031945\|Ga0310913_10651851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella qitaiheensis	746	Open in IMG/M
3300031954\|Ga0306926_12645131	Not Available	546	Open in IMG/M
3300032010\|Ga0318569_10421484	Not Available	622	Open in IMG/M
3300032039\|Ga0318559_10615103	Not Available	507	Open in IMG/M
3300032063\|Ga0318504_10478971	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300032066\|Ga0318514_10172628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1127	Open in IMG/M
3300032068\|Ga0318553_10080699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1639	Open in IMG/M
3300032089\|Ga0318525_10596309	Not Available	564	Open in IMG/M
3300032160\|Ga0311301_11626955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. yr375	784	Open in IMG/M
3300032160\|Ga0311301_11848674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	716	Open in IMG/M
3300032261\|Ga0306920_100346228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2212	Open in IMG/M
3300032770\|Ga0335085_10055717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5311	Open in IMG/M
3300032783\|Ga0335079_10113909	All Organisms → cellular organisms → Bacteria	3057	Open in IMG/M
3300032805\|Ga0335078_10302945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2148	Open in IMG/M
3300032805\|Ga0335078_12197466	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300032893\|Ga0335069_10869020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1010	Open in IMG/M
3300032895\|Ga0335074_10000875	All Organisms → cellular organisms → Bacteria	41130	Open in IMG/M
3300032895\|Ga0335074_10004392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19433	Open in IMG/M
3300032895\|Ga0335074_10202996	Not Available	2412	Open in IMG/M
3300032895\|Ga0335074_10235056	Not Available	2179	Open in IMG/M
3300032895\|Ga0335074_10277771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1939	Open in IMG/M
3300032895\|Ga0335074_10320320	Not Available	1753	Open in IMG/M
3300032895\|Ga0335074_10343045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1668	Open in IMG/M
3300032896\|Ga0335075_10033597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7374	Open in IMG/M
3300032896\|Ga0335075_10041796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6478	Open in IMG/M
3300032896\|Ga0335075_10163710	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2743	Open in IMG/M
3300032896\|Ga0335075_10187833	Not Available	2496	Open in IMG/M
3300032896\|Ga0335075_10270582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium azadirachtae	1933	Open in IMG/M
3300032896\|Ga0335075_10301054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus → Kineococcus siccus	1792	Open in IMG/M
3300032896\|Ga0335075_10630091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1052	Open in IMG/M
3300032896\|Ga0335075_11292734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. yr375	624	Open in IMG/M
3300032896\|Ga0335075_11416610	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300032898\|Ga0335072_10383381	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300032955\|Ga0335076_10045932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4345	Open in IMG/M
3300032955\|Ga0335076_10874237	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300033134\|Ga0335073_10010748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12868	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.11%
Host-Associated	Host-Associated	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.38%
Aquatic	Environmental → Aquatic	9.73%
Plants	Host-Associated → Plants	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.38%
Freshwater	Environmental → Aquatic → Freshwater	8.85%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	22.12%
Loam	Environmental → Terrestrial → Soil → Loam	10.62%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.85%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	22.12%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.08%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.54%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.25%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	22.12%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.31%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.65%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.77%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_100854911	3300003505	Forest Soil	MDYQLIIKTDERGQPRIDGYAGQLPPSAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDVQAP
Ga0062386_1000074314	3300004152	Bog Forest Soil	MDYQLIIKTDEHGQPRIEGYTGPLPPDATFTIAGSEAADEDPWASLIVVNDIIIETGAVTGVRVGVAEKR*
Ga0062386_1000250815	3300004152	Bog Forest Soil	VDYQLIIKTDEHGQPRIEGYTGSLPPDATFTVAGSEAADEDPWASLIVVNDIIIETGAVTGVRVGARVPRS*
Ga0070709_100037864	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDYQLIIKTDERGQPRIDGYTGQLPPDAIFTVTGHEDDDTEPWTRLVVVNDVIIDTGAVTGVRVGARHSDAPAS*
Ga0070710_100084461	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	YQLIIKTDERGQPRIDGYTGQLPPDAIFTVTGHEDDDTEPWTRLVVVNDVIIDTGAVTGVRVGARHSDAPAS*
Ga0070711_1010938092	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDYQLIIKTDERGQPRIDGYTGQLPPDAIFTVTGHEDDDTEPWTRLVVVNDVIIDTGAVTGVRVGAQ
Ga0070763_103117691	3300005610	Soil	GYFSYMDYQLIIKTDERGQPRIDGYTGQLPPAAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDAQAPH*
Ga0070764_100841742	3300005712	Soil	MDYQLIIKTDERGQPRIDGYAGQLPPSAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRGAQAPH*
Ga0070766_103275932	3300005921	Soil	VPSGRGYFSYMDYQLIIKTDERGQPRIDGYTGQLPPAATFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDAQAPH*
Ga0070765_1000715481	3300006176	Soil	MDYQLIIKTDERGQPRIDGYAGQLPPAAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDAQAPR*
Ga0079220_110742951	3300006806	Agricultural Soil	MDYQVIIKTDERGQPRIDGYTGQLPPDAIFTVTGHEDEDTEWTRLVVVNDVIIDTGAVTGVRVGAQHSDAPASST*
Ga0126373_110001611	3300010048	Tropical Forest Soil	VHGQPTIDGYTGQLPPGATFTVTGSEDDDAETWIRIIVVNDVIIDTGAVTGVRAGAEHSAAS*
Ga0126373_110869311	3300010048	Tropical Forest Soil	MDYELIIKTDEQGRPRIDGYTGPLPLNATFTVTGSEAEDADPWIRIIIINDVVIDTAAVTGVKVGTQHADIRVPLS*
Ga0136449_1011748622	3300010379	Peatlands Soil	MDYQLIIKTDERGQPRIDGYTGELPPGAIFTVTGSEDEDTEPWTRLVVVNDVIIDTGAVTGVRVGARHSDAPAS*
Ga0137776_12883302	3300010937	Sediment	VDYQLIIRTDESGQPRIDGHAGPLPPDATFTITGSEAADEDPWASLIVVNDVIIETGAVTGVRVGTRVPHS*
Ga0182036_108293891	3300016270	Soil	MDYQLIIKTDEQGRPRIDGYTGPLPLNATLTITGSEAEEADPWIRIIIINDVIIDTAAVTGVKVGAQHGDTRVPL
Ga0187812_10003224	3300017821	Freshwater Sediment	MDYQLTIKTDERGQPRIDGYTGHLPPTATFTISGSETDDADPWTRLIIFNDVVIDTGAVTGVRVGAQDSDAAAPHP
Ga0187807_10035044	3300017926	Freshwater Sediment	MDYQLTIKTDECGQPRIDGYTGHLPPTATFTISGSETDDADPWTRLIIFNDVVIDTGAVTGVRVGAQDSDAAAPHP
Ga0187807_12927242	3300017926	Freshwater Sediment	MDYQLIIKTDERGQPRIDGYTGQLPPDALFTVTGDEDEDTEPWTRLVVVNDVIIDTGAVTGVRVGAQHSDAPAS
Ga0187809_102374232	3300017937	Freshwater Sediment	MDYQLIIKTDERGQPRIDGYTGPLPPAATFTVTGSEDEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDVQAPH
Ga0187809_102443061	3300017937	Freshwater Sediment	MDYQLIIKTDERGQPRIDGYTGQLPPDAIFTVTGNEDEDTEPWTRLVIVNDVIIDTGAVTGVRVGAQHSDAPAS
Ga0187822_101744531	3300017994	Freshwater Sediment	IKTDERGQPRIDGYTGELPPGAIFTVTGSEDEDTEPWTRLVVVNDVIIDTGAVTGVRVGAQHSDAPAS
Ga0210407_109317141	3300020579	Soil	MDYQLIIKTDERGQPRIDGYAGQLPPSAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDVQAPR
Ga0210399_112590562	3300020581	Soil	MDYQLIIKTDERGQPRIGGYAGQLPPDAIFTVTGNEDEDTEPWTRLVVVNDVIIDTGAVTGVRVGTQHSDAPAS
Ga0210395_103026022	3300020582	Soil	MDYQLIIKTDERGQPRIDGYTGQLPPAAIVTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDAQAPR
Ga0210395_106507821	3300020582	Soil	YFSYMDYQLIIKTDERGQPRIDGYTGQLPPAAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDAQAPH
Ga0210401_104518662	3300020583	Soil	MDYQLIIKTDERGQPRIDGYAGQLPPSAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRGAQAPH
Ga0210404_100363292	3300021088	Soil	MDYQLIIKTDERGQPRIDGYTGQLPPAAIFTVTGSEDEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDAQAPH
Ga0210405_110925561	3300021171	Soil	AEVRAYMDYQLIIKTDERGQPRIGGYAGQLPPDAIFTVTGNEDEDTEPWTRLVVVNDVIIDTGAVTGVRVGTQHSDAPAS
Ga0210408_101192022	3300021178	Soil	MDYQLIIKTDERGQPRIDGYAGQLPPAAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRGAQAPH
Ga0210396_113404722	3300021180	Soil	MDYQLIITTDERGQPRIDGYTGELPPGAIFTVTGSEDEDTEPWTRLVVVNDVIIDTGAVTGVRAGELVGP
Ga0213875_104583182	3300021388	Plant Roots	MDYQLIIKTDKLGRPTIEGYTGQLPPGATFTVTGSEDEDAEPWTRLIVVNDVIIDTGFVTGVRVGAEQPVD
Ga0210385_104797412	3300021402	Soil	VPSGRGYFSYMDYQLIIKTDERGRPRIDGYTGQLPPAAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDAPAPR
Ga0210397_116258281	3300021403	Soil	MDYQLIIKTDERGRPRIDGYTGQLPPAAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDA
Ga0210387_104535442	3300021405	Soil	MDYQLIIKTDERGRPRIDGYTGQLPPAAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDVQ
Ga0210386_101341674	3300021406	Soil	MDYQLIIKTDERGRPRIDGYTGQLPPAAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDAQA
Ga0210394_103992822	3300021420	Soil	MDYQLIIKTDERGQPRIDGYTGQLPPAAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDAQAPR
Ga0210384_111398351	3300021432	Soil	MDYQLIIKTDERGQPRIDGYTGQLPPAAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRD
Ga0210391_107155881	3300021433	Soil	VPSGRGYFSYMDYQLIIKTDERGQPRIDGYTGQLPPAAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDAQAPR
Ga0210390_101174573	3300021474	Soil	VPSGRGYFSYMDYQLIIKTDERGQPRIDGYAGQLPPSAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRGAQAPH
Ga0210392_101133702	3300021475	Soil	MDYQLIIKTDERGRPRIDGYTGQLPPAAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRGAQAPH
Ga0210402_114885131	3300021478	Soil	MDYQLIIKTDERGRPRIDGYTGQLPPAAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDVQAPR
Ga0126371_102202182	3300021560	Tropical Forest Soil	MDYELIIKTDEQGRPRIDGYTGPLPLNATFTVTGSEAEDADPWIRIIIINDVVIDTAAVTGVKVGTQHADIRVPLS
Ga0242664_11466032	3300022527	Soil	KTDERGQPRIDGYTGQLPPAAIFTVTGSEDEDAETWTRLVVVNDVIIDTGAVTGARVGAQHHRDAQAPH
Ga0242668_11335852	3300022529	Soil	GQPRIDGYTGELPPGAIFTVTGSEDEDTEPWTRLVVVNDVIIDTGAVTGVRAGELVGP
Ga0242675_10197641	3300022718	Soil	YMDYQLIIKTDERGQPRIDGYTGQLPPAAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRGAQAPH
Ga0207664_105261002	3300025929	Agricultural Soil	VDYQITIKTDERGEPMIEGCTGQLPPAATFTVTGSEDEDAEPWTRLVVVNDVIIDTGAVTGARVGDQRGRPAAPVSS
Ga0209218_11329452	3300027505	Forest Soil	MDYQLIIKTDERGQPRIDGYTGQLPPAATFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDAQAPH
Ga0209656_100442023	3300027812	Bog Forest Soil	VDYQLIIKTDEHGQPRIEGYTGSLPPDATFTVAGSEAADEDPWASLIVVNDIIIETGAVTGVRVGARVPRS
Ga0209656_101420781	3300027812	Bog Forest Soil	MDYQLIIKTDEHGQPRIEGYTGPLPPDATFTIAGSEAADEDPWASLIVVNDIIIETGAVTGVRVGVAEKR
Ga0209380_100107065	3300027889	Soil	VPSGRGYFSYMDYQLIIKTDERGQPRIDGYTGQLPPAATFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDAQAPH
Ga0209624_110145972	3300027895	Forest Soil	MDYQLIIKTDERGQPRIDGYTGQLPPNAIFTVTGSEDEDTEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDAQAPH
Ga0265763_10421681	3300030763	Soil	MDYQLIIKTDERGQPRIDGYTGQLPPAAIFTVTGSEDEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDAQ
Ga0318516_101117493	3300031543	Soil	MDYQLIIKTDEHGRPSIDGYTGPLPPAATFTITGSEAEEADPWIRVIIINDVVIDTGAVTGVKIGARHGDARVPLSQG
Ga0318534_100191233	3300031544	Soil	MDYQLIIKTDEHGRPRIDGYTGPLPRAATFTVTGSETEDADPWTRLIVINDVIIDTGTAAGVKVGTQHG
Ga0318534_103592552	3300031544	Soil	MEYQLIIKTDDHGQPRIEGYTGPLPPGATFTIAGSEVENEDPWASLIIVNDVIIETGAVTGVRISAQHDGTPAPLS
Ga0318538_102526101	3300031546	Soil	MDYQLIIKTDEHGRPSIDGYTGPLPPAATFTITGSEAEEADPWIRVIIINDVVIDTGAVTGVKIGARRGDARVPLSQG
Ga0318573_107116051	3300031564	Soil	MDYQLIIKTDEHGRPRIDGYTGPLPPAATLTITGSEAEDADPWTRLIVINDVIIDTGTAAGVRVGTQHGDTRMPLS
Ga0310915_109197041	3300031573	Soil	MDYQLIIKTDEHGRPSIDGYTGPLPPAATFTITGSEAEEADPWIRVIIINDVVIDTGAVTGVKVGARHG
Ga0318555_102138442	3300031640	Soil	MDYQLIIKTDEHGRPRIDGYTGPLPRAATFTVTGSETEDADPWTRLIVINDVIIDTGTAAGVKVGTQHGDTWMPLP
Ga0318555_103114791	3300031640	Soil	MDYQLIIKTDEHGRPRIDGYTGPLPPAATFTVTGSEAEEADPWIRIIVINDVVIDTGMVAGVKVGTQHGDTRVPLS
Ga0310686_1099857311	3300031708	Soil	MDYQLIIKTDERGQPRIDGYTGRLPPAAIFTVTGSEDEDTEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDAQAPH
Ga0307476_105238412	3300031715	Hardwood Forest Soil	MDYQLIIKTDERGQPKIDGYTGQLPPAAIFTVTGSEDEDAEPWTRLVVVNDVIIDTGAVTGARVGAQHRDAQAPH
Ga0318501_103059742	3300031736	Soil	MDYQLIIKTDEHGRPRIDGYTGPLPPAATFTITGSEAEEADPWIRVIIINDVVIDTGAVTGVKIGARHGDARVPLSQG
Ga0318494_106080531	3300031751	Soil	MDYQLIIKTDEHGRPRIDGYTGPLPPDATLTITGSEAEEADPWTRLIIINDVIIDTGMVAGVKVGAQHGDTRVPLS
Ga0318494_109495662	3300031751	Soil	HMDYQLIIKTDEHGRPRIDGYTGPLPPAATLTITGSEAEDADPWTRLIVINDVIIDTGTAAGVRVGTQHGDTRMPLS
Ga0318554_103298132	3300031765	Soil	MDYQLIIKTDEHGRPRIDGYTGPLPPAATFTVTGSEAEEADPWIRIIVINDVVIDTGMVAGVKVGTQHG
Ga0318521_106441251	3300031770	Soil	MDYQLIIKTDEHGRPRIDGYTGPLPPAATFTITGSEAEEADPWIRVIIINDVVIDTGAVTGVKIGARRGDARVPLSQG
Ga0318498_104033071	3300031778	Soil	MDYQLIIKTDEHGRPRIDGYTGPLPPAATLTITGSEAEDADPWTRLIVINDVIIDTGTVAGVKVGTQHGDTRMPLP
Ga0318547_110894931	3300031781	Soil	TDEHGRPRIDGYTGPLPRAATFTVTGSETEDADPWTRLIVINDVIIDTGTAAGVKVGTQHGDTWMPLP
Ga0318552_104441131	3300031782	Soil	MDYQLIIKTDEHGRPRIDGYTGPLPPAATLTITGSEAEDADPWTRLIVINDVIIDTGTVAGVKVGTQHGDTRVPLS
Ga0318557_105600431	3300031795	Soil	MDYQLIIKTDEHGRPSIDGYTGPLPPAATFTITGSEAEEADPWIRVIIINDVVIDTGAVTGVK
Ga0318576_101040262	3300031796	Soil	MDYQLIIKTDEHGRPRIDGYTGPLPPAATLTITGSEAEDADPWTRLIVINDVIIDTGTAAGVRVGTQHGDT
Ga0318565_103735521	3300031799	Soil	MDYQLIIKTDEHGRPSIDGYTGPLPPAATFTITGSEAEEADPWIRVIIINDVVIDTGAVTGVKVGARHGDARVPLS
Ga0318497_107713511	3300031805	Soil	MEYQLIIKTDDHGQPRIEGYTGPLPPGATFTIAGSEVENEDPWASLIIVNDVIIETGAVTGVR
Ga0307478_100094464	3300031823	Hardwood Forest Soil	MDYQLIIKTDERGQPRIDGYTGQLPPAAIFTVTGSEDEDAEPWTRLVVVNDVIIDTGAVTGARVGAQHRDAQAPH
Ga0318511_105115511	3300031845	Soil	MDYQLIIKTDEHGRPSIDGYTGPLPPAATFTITGSEAEEADPWIRVIIINDVVIDTGAVTGVKIGARRGDARVPLS
Ga0310913_106518512	3300031945	Soil	MDYQLIIKTDEHGRPRIDGYTGPLPRAATFTVTGSETEDADPWTRLIVINDVIIDTGTAAGVRVGTQHGDTRMPLS
Ga0306926_126451311	3300031954	Soil	MDYQLIIKTDEHGRPRIDGYTGPLPPAATLTITGSEAEDADPWTRLIVINDVIIDTGTAAGVKVGTQHGDTWMPLP
Ga0318569_104214841	3300032010	Soil	MDYQLIIKTDEHGRPSIDGYTGPLPPAATFTITGSEAEEADPWIRIIVINDVVIDTGMVAGVKVGTQHGDTRVPLS
Ga0318559_106151031	3300032039	Soil	MDYQLIIKTDEHGRPRIDGYTGPLPPAATLTITGSEAEDADPWTRLIVINDVIIDTGTAAGVKVGTQHGDTRMPLP
Ga0318504_104789712	3300032063	Soil	MDYQLIIKTDEHGRPRIDGYTGPLPPAATFTVTGSEAEEADPWIRIIVINDVVIDTGMVAGVKVGAQHGDTRVPLS
Ga0318514_101726281	3300032066	Soil	QLIIKTDEHGRPRIDGYTGPLPPAATFTVTGSEAEEADPWIRVIIINDVVIDTGAVTGVKIGARHGDARVPLSQG
Ga0318553_100806991	3300032068	Soil	MDYQLIIKTDEHGRPRIDGYTGPLPPAATFTVTGSEAEEADPWTRLIVINDVIIDTGTAAGVRVGTQHGDTRMPLS
Ga0318525_105963091	3300032089	Soil	MDYQLIIKTDEHGRPRIDGYTGPLPPAATLTITGSEAEDADPWTRLIIINDVVIDTGAVTGVKIGARHGDARVPLSQG
Ga0311301_116269552	3300032160	Peatlands Soil	MDYQLIIKTDERGQPRIDGYTGELPPGAIFTVTGSEDEDTEPWTRLVVVNDVIIDTGAVTGVRVGARHSDAPAS
Ga0311301_118486741	3300032160	Peatlands Soil	IIKTDERGQPRIDGYTGRLPPAAIFTVTGSEAEDAEPWTRLVVVNDVIIDTGAVTGVRVGAQHRDAQAPH
Ga0306920_1003462281	3300032261	Soil	DEHGRPRIDGYTGPLPPAATLTITGSEAEDADPWTRLIVINDVIIDTGTAAGVRVGTQHGDTRMPLS
Ga0335085_100557175	3300032770	Soil	MDYQLIIKTDERGQPRIDGYTGQLPLDAIFTVTGHEDEDTEWTRLVVVNDVIIDTGAVTGVRVGAQHSDAPASST
Ga0335079_101139092	3300032783	Soil	MDYQLIIKTDERGQPRIDGYTGQLPPDAIFTVTGHEDEDTEWTRLVVVNDVIIDTGAVTGVRVGAQHSDAPASST
Ga0335078_103029453	3300032805	Soil	MDYQLIIKTDERGQPRIDGHTGQLPPDAIFTVTGSEDEDTEPWSRIIVVNDVIIDTGAVTGVRVGAQRSDAPAS
Ga0335078_121974662	3300032805	Soil	MDYQLIITTDEHGQPRIDGYAGQLPPDATFTVTGNEDDDTEPWTRIIVVNDVIIDTGAVTGVRIGAQHHC
Ga0335069_108690202	3300032893	Soil	MDYQLIITTDEHGQPRIDGYTGQLPPDATFTVTGNEDDDTEPWSRIIVVNDVIIDTGAVTGVRIGAQHHC
Ga0335074_100008757	3300032895	Soil	MDYELTIKTDEHGQPRIDGYTGQLPPDATFTITGTEAEDEEPWTRLIVVNDVIIDTGAVTGVRASFTAR
Ga0335074_1000439221	3300032895	Soil	MDYQLIITTDERGQPRIDGYTGQLPPDAIFTVTGHEDEETEPWTRLIVVNDVIIDTGAVTGVRAGARHSEVPAS
Ga0335074_102029962	3300032895	Soil	MDYQLIIKTDEHGQPMIDGYTGQLPPTAIFTVTGSEAEDADPWTRLVLINDVIIDTGAVTGVKVGVQDRDIHARRQAATARPGCPQDR
Ga0335074_102350563	3300032895	Soil	MDYQLIIKTDEHGRPVIDGYTGQLPPAATFTVTGSEAEDEDPWTRLVLINDVIIDTGAVTGVRIGAQHRDIRASHSLDS
Ga0335074_102777712	3300032895	Soil	MDYELTIRTDEHGQPRIDGYTTQLPPDATFTITGSEAEDDEPWTRLIVVNDVIIDTGAVTGVRASFTGR
Ga0335074_103203201	3300032895	Soil	MDYQLIIKTDEHGQPMIDGYTGQLPPTATFTVTGSEAEDADPWTRLVLINDVIIDTGAVTGVKVGVQDRDIHARRQAATARPGCPQDR
Ga0335074_103430452	3300032895	Soil	MDYQLIIKTDEHGQPRIDGYTGQLPPTATFTVTGNEDDDVDPWTRLVIFNDAIIDTGAVTGVRVGAQHHDLQAPHSPAS
Ga0335075_100335979	3300032896	Soil	MDYELTIKTDEHGQPRIDEYAGQLPPDATFTITGTEAEDEEPWTRLIVVNDVIIDTGAVTGVRASFTAR
Ga0335075_100417966	3300032896	Soil	MDYQLTIRTDERGQPTIDGYTGQLPPAATLTITGSEAEDAEPWTRLIVVNDVIIDTGAVTGVRVGVQHKERS
Ga0335075_101637104	3300032896	Soil	MDYELIIKTDERGQPRIDGYTGQLPPTATLTVTGSEDDDVDPWTRLVIFNDAIIDTGAVTGVRVGAQHHDLRAPHSPAS
Ga0335075_101878333	3300032896	Soil	MDYQLIIKTDEHGQPMIDGYTGQLPPTATFTVTGSEAEDADPWTRLVLINDVIIDTGAVTGVKVGGQDRDVRALRQVATARPGCPEDR
Ga0335075_102705821	3300032896	Soil	MDYELIIKTDEHGQPTIEGYTGQLPPTATFTVTGSEDDDDTDPWTRLVIFNDAIIDTGAVTGVRVAARHQGTNQG
Ga0335075_103010542	3300032896	Soil	MDYQLIIKTDEHGQPMIDGYTGQLPPTAIFTVTGSEAEDADPWTRLVVFNDVIIDTGAVTGVKVGAQDRDIRALRRAATARPGCPQDR
Ga0335075_106300912	3300032896	Soil	MDYELTIRTDEHGQPRIDGYTGQLPPDATFTITGTEAEDEEPWTRLIVVNDVIIDTGAVTGARASFTGR
Ga0335075_112927341	3300032896	Soil	MDYQLIITTDERGQPRIDGYTGQLPPDAIFTVTGHEDEETEPWTRLIVVNDVIIDTGAVTGVRASASRTC
Ga0335075_114166102	3300032896	Soil	MDYQLIIKTDERGRPTIEGYTGQLPPGAIFTVTGSEDEDGDPWTRLVVVNDVIIDTGAVTGARVVAGHSAAS
Ga0335072_103833813	3300032898	Soil	MDYQLIIKTDERGQPTIEGYTGQLPPGAILTVTGSEDEDGDPWTRLVVVNDVIIDTGAVTGARVVAGHSAAS
Ga0335076_100459323	3300032955	Soil	MDYQLIIKTDERGQPRIDGYTGQLPPDAIFTVTGNEDEDTEPWTRIIVVNDVIIDTGAVTGVRVGAQHSDAPAS
Ga0335076_108742372	3300032955	Soil	MDYQLIIKTDERGQPTIDGYTGQLPPAATFTVTGTEEEDAEPWTRLVVVNDVIIDTGAVTGARVAQHS
Ga0335073_100107484	3300033134	Soil	MDYELTIKTDEHGQPRIDEYAGQLPPDATFTITGTEAEDEEPWTRLIVVNDVIIDTGAVTGVRASFTGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083000

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences