Metagenome / Metatranscriptome Family F082996

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082996
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	69 residues
Representative Sequence	MLCETCRWTERPGFIRRPAKPDPGPAAPRDEAADFIPCPDCGGQAIAHCCEGLCEQPDAPGALPRGGQ
Number of Associated Samples	87
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.82 %
% of genes near scaffold ends (potentially truncated)	24.78 %
% of genes from short scaffolds (< 2000 bps)	71.68 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.381 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.929 % of family members)
Environment Ontology (ENVO)	Unclassified (33.628 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.681 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.17% β-sheet: 6.25% Coil/Unstructured: 89.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00912	Transgly	21.24
PF07690	MFS_1	7.08
PF02646	RmuC	5.31
PF01327	Pep_deformylase	1.77
PF00691	OmpA	1.77
PF00551	Formyl_trans_N	0.88
PF04392	ABC_sub_bind	0.88
PF00296	Bac_luciferase	0.88
PF14824	Sirohm_synth_M	0.88
PF07519	Tannase	0.88
PF03734	YkuD	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	21.24
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	21.24
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	21.24
COG1322	DNA anti-recombination protein (rearrangement mutator) RmuC	Replication, recombination and repair [L]	5.31
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	1.77
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.88
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.88
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.88
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.38 %
Unclassified	root	N/A	10.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.38 %
Unclassified	root	N/A	10.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.38 %
Unclassified	root	N/A	10.62 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	55.75 %
Unclassified	root	N/A	10.62 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	44.25 %
Unclassified	root	N/A	10.62 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	23.89 %
Unclassified	root	N/A	10.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.62 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	2.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.88 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.62 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.65 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.62 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.65 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.62 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.65 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100104713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2652	Open in IMG/M
3300003505\|JGIcombinedJ51221_10308380	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300004082\|Ga0062384_100199795	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300005434\|Ga0070709_11207349	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300005531\|Ga0070738_10092141	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300005532\|Ga0070739_10032105	All Organisms → cellular organisms → Bacteria	3841	Open in IMG/M
3300005538\|Ga0070731_10228748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1234	Open in IMG/M
3300005538\|Ga0070731_10435034	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300005542\|Ga0070732_10000332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	31965	Open in IMG/M
3300005591\|Ga0070761_10783361	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005610\|Ga0070763_10007100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4432	Open in IMG/M
3300005610\|Ga0070763_10681991	Not Available	601	Open in IMG/M
3300005712\|Ga0070764_10105609	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300005712\|Ga0070764_10809987	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005921\|Ga0070766_10114234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1615	Open in IMG/M
3300006102\|Ga0075015_100392263	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300006176\|Ga0070765_100143543	All Organisms → cellular organisms → Bacteria	2122	Open in IMG/M
3300006176\|Ga0070765_100409056	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300006176\|Ga0070765_102051872	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300006893\|Ga0073928_10066511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3150	Open in IMG/M
3300006893\|Ga0073928_10459063	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300006893\|Ga0073928_10992007	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300009521\|Ga0116222_1250424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	764	Open in IMG/M
3300009523\|Ga0116221_1301200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300009698\|Ga0116216_10424921	All Organisms → cellular organisms → Bacteria → Proteobacteria	806	Open in IMG/M
3300009700\|Ga0116217_10805905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	578	Open in IMG/M
3300009839\|Ga0116223_10401695	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300010343\|Ga0074044_10945412	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300010379\|Ga0136449_101531257	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300010379\|Ga0136449_101994076	All Organisms → cellular organisms → Bacteria → Proteobacteria	857	Open in IMG/M
3300010379\|Ga0136449_102522037	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300010379\|Ga0136449_103184153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	635	Open in IMG/M
3300010379\|Ga0136449_103257174	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300010379\|Ga0136449_104270432	Not Available	529	Open in IMG/M
3300010396\|Ga0134126_12269896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300010937\|Ga0137776_1813051	Not Available	508	Open in IMG/M
3300012363\|Ga0137390_10614672	All Organisms → cellular organisms → Bacteria → Proteobacteria	1054	Open in IMG/M
3300014164\|Ga0181532_10664340	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300014200\|Ga0181526_10951383	Not Available	540	Open in IMG/M
3300014501\|Ga0182024_10083088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4760	Open in IMG/M
3300014501\|Ga0182024_10515890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1516	Open in IMG/M
3300014501\|Ga0182024_10957100	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300014657\|Ga0181522_10806557	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300017975\|Ga0187782_10686989	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300018047\|Ga0187859_10274991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	908	Open in IMG/M
3300018057\|Ga0187858_10020067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5248	Open in IMG/M
3300020021\|Ga0193726_1000262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	66783	Open in IMG/M
3300020580\|Ga0210403_11260335	Not Available	567	Open in IMG/M
3300020581\|Ga0210399_10655977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	865	Open in IMG/M
3300020582\|Ga0210395_10006103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9154	Open in IMG/M
3300020582\|Ga0210395_10143963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1777	Open in IMG/M
3300020583\|Ga0210401_10774535	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300021088\|Ga0210404_10581929	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300021402\|Ga0210385_10010527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5646	Open in IMG/M
3300021403\|Ga0210397_10800522	All Organisms → cellular organisms → Bacteria → Proteobacteria	727	Open in IMG/M
3300021404\|Ga0210389_11105174	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300021405\|Ga0210387_11886252	Not Available	502	Open in IMG/M
3300021407\|Ga0210383_11558400	Not Available	545	Open in IMG/M
3300021420\|Ga0210394_10819135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	812	Open in IMG/M
3300021420\|Ga0210394_11362462	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300021432\|Ga0210384_10334998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1363	Open in IMG/M
3300021433\|Ga0210391_11309609	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300021477\|Ga0210398_10052159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3357	Open in IMG/M
3300021478\|Ga0210402_11078597	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300021861\|Ga0213853_11036687	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300022557\|Ga0212123_10076293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2857	Open in IMG/M
3300022557\|Ga0212123_10442846	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300022557\|Ga0212123_10659921	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300024271\|Ga0224564_1002213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2900	Open in IMG/M
3300025906\|Ga0207699_10779844	All Organisms → cellular organisms → Bacteria → Proteobacteria	702	Open in IMG/M
3300025906\|Ga0207699_10810650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	688	Open in IMG/M
3300027030\|Ga0208240_1019546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	731	Open in IMG/M
3300027090\|Ga0208604_1000071	All Organisms → cellular organisms → Bacteria → Proteobacteria	14935	Open in IMG/M
3300027096\|Ga0208099_1002489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2117	Open in IMG/M
3300027370\|Ga0209010_1001918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5092	Open in IMG/M
3300027565\|Ga0209219_1037079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1215	Open in IMG/M
3300027567\|Ga0209115_1011152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1914	Open in IMG/M
3300027629\|Ga0209422_1059658	All Organisms → cellular organisms → Bacteria → Proteobacteria	908	Open in IMG/M
3300027660\|Ga0209736_1149991	Not Available	620	Open in IMG/M
3300027678\|Ga0209011_1006341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4043	Open in IMG/M
3300027684\|Ga0209626_1006926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2559	Open in IMG/M
3300027684\|Ga0209626_1162452	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300027842\|Ga0209580_10000040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	148636	Open in IMG/M
3300027855\|Ga0209693_10012589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3989	Open in IMG/M
3300027869\|Ga0209579_10121456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1388	Open in IMG/M
3300027879\|Ga0209169_10034205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2687	Open in IMG/M
3300027884\|Ga0209275_10041403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2175	Open in IMG/M
3300027889\|Ga0209380_10194153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1192	Open in IMG/M
3300027895\|Ga0209624_10849718	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300027908\|Ga0209006_10505767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1007	Open in IMG/M
3300028047\|Ga0209526_10047173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3031	Open in IMG/M
3300028906\|Ga0308309_10120403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2066	Open in IMG/M
3300028906\|Ga0308309_10235137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1526	Open in IMG/M
3300030399\|Ga0311353_10750241	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300031057\|Ga0170834_107881309	All Organisms → cellular organisms → Bacteria → Proteobacteria	1031	Open in IMG/M
3300031090\|Ga0265760_10202248	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300031122\|Ga0170822_13000224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	918	Open in IMG/M
3300031231\|Ga0170824_100832339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1318	Open in IMG/M
3300031247\|Ga0265340_10232924	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300031524\|Ga0302320_10712707	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300031708\|Ga0310686_113447828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4417	Open in IMG/M
3300031715\|Ga0307476_10000439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	33123	Open in IMG/M
3300031753\|Ga0307477_10432663	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300032160\|Ga0311301_11336632	All Organisms → cellular organisms → Bacteria → Proteobacteria	901	Open in IMG/M
3300032160\|Ga0311301_11939792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	691	Open in IMG/M
3300032160\|Ga0311301_12158799	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300032783\|Ga0335079_10544883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1231	Open in IMG/M
3300032805\|Ga0335078_11876494	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300032892\|Ga0335081_10028662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	8958	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.11%
Host-Associated	Host-Associated	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.07%
Aquatic	Environmental → Aquatic	15.04%
Plants	Host-Associated → Plants	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.30%
Freshwater	Environmental → Aquatic → Freshwater	7.08%
Thermal Springs	Environmental → Aquatic → Thermal Springs	6.19%
Sediment	Environmental → Aquatic → Sediment	1.77%
Peat	Environmental → Terrestrial → Peat	1.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.25%
Loam	Environmental → Terrestrial → Soil → Loam	30.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.19%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	6.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	28.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.19%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	5.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.42%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	14.16%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	14.16%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	12.39%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.19%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	5.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.77%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.77%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.89%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.89%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.89%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1001047133	3300002245	Forest Soil	MLCETCRWTERPGFIRRPAKPDPGPAAPRDEAAAFIPCPDCGGQAIAHCCEGLCEQPAPDAPGELPSGRR*
JGIcombinedJ51221_103083801	3300003505	Forest Soil	MLCETCRWTERPGFIRRPAKPDSGPAAPRDQAADFIPCPDCGGQAIAHCCEGLCEQPDAPGASPRGGR*
Ga0062384_1001997952	3300004082	Bog Forest Soil	MLCETCRWTERPGFIRRPVKRDPSPAVARDEAADFIPCPECGGAAIAHCCEGLCEQPEADAPGALPLGRR*
Ga0070709_112073492	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLCETCRWTERPGFIRRPAETAAGAVARQGDAADFIPCPDCGGQAIAHCCEGLCEQPE
Ga0070738_100921412	3300005531	Surface Soil	MLCETCRWSERPGFVRRAAVARNVQPPSAEAADFVPCPDCGGHGIAHCCEGLCEQPEPGLPKR*
Ga0070739_100321052	3300005532	Surface Soil	MLCETCRWSERPGFVRRAAGARNVQPPSAEAADFVPCPDCGGHGIAHCCEGLCEQPEPGLPKR*
Ga0070731_102287482	3300005538	Surface Soil	MLCETCRWTERPGFIRRPAKPDPGPAAARDDAADFIPCPDCGGHAIAHCCEGLCEQPEPDAPGASATSPRGGL*
Ga0070731_104350341	3300005538	Surface Soil	SIGRARLKPRIIAMLCDTCRWTERPGFIRSQPATDTQQRDDGLDFIPCPECGGQAVAHCCEGLCEQPEPTERGG*
Ga0070732_1000033211	3300005542	Surface Soil	MLCETCRWTERPGFVRRPAETAAGPVARQGDAADFIPCPDCGGQAIAHCCEGLCEQPEADAPGASGASGASGASPLGGQ*
Ga0070761_107833612	3300005591	Soil	MLCETCRWTERPGFIRRLAEANNGAMAHLVDTADFIPCPDCGGQAIAHCCEGLCEQPAPDAPGELPPGRR*
Ga0070763_100071002	3300005610	Soil	MLCETCRWTERPGFVRRPAKPDPGPAAPPDEAADFIPCPDCGGAAIAHCCEGLCEQPDAPGASGALPRGGQ*
Ga0070763_106819911	3300005610	Soil	MLCATCRWTERPGFIRRPAEPGPAAGRDEAADYIPCPDCGGAAIAHCCEGLCEQPDAPGASRPGGQ*
Ga0070764_101056092	3300005712	Soil	MLCETCRWTERPGFVRRPAKPDPGHAAPRDEAADYIPCPDCGGQAIAHCCEGLCEQPEATGASGASGALPRGGQ*
Ga0070764_102914091	3300005712	Soil	ERPGFIRQASVSAGQQDRDEPVFIPCPECGGQTVAHCCEGLCEQPAPDGPEPGV*
Ga0070764_108099872	3300005712	Soil	LCETCRWTERPGFVRRPAKPDPGPAAARDEAADFIPCPDCGGAAIAHCCEGLCEQPDAPGASGALPRGGQ*
Ga0070766_101142342	3300005921	Soil	MLCETCRWTERPGFIRRPAKPDPGPAAARDEAADFIPCPDCGGQAIAHCCEGLCEQPDASGASGASSIGGQ*
Ga0075017_1008751542	3300006059	Watersheds	MTADIGACSLGGKQRLGASAMLCETCRWTERPGFVRSPAKPDPGPAAVRDEAADFIPCPDCGGAAIAHCCEGLCEQPEPDAPGASPLGGQ*
Ga0075015_1003922632	3300006102	Watersheds	MLCETCRWTERPGFIRRPAEPNPGPAAARDEAAAFIPCPDCGGQAIAHCCEGLCEQPEADAPGAPEASPLGRF*
Ga0070765_1001435432	3300006176	Soil	MFCDTRRWTERPGFVRRPATPVTPDVGSLPPPGSEAAAFVPCPDCGGQAIAHCCEGLCEQPEADTHG*
Ga0070765_1004090562	3300006176	Soil	MLCETCRWTERPGFVRRPAKPDPGPVAARDAAADFIPCPDCGGAAIAHCCEGLCEQPEPDAPGALPIGGQ*
Ga0070765_1020518721	3300006176	Soil	MLCETCRWTQRPGFISRPAKPDPGPAAARDEAADFIPCPDCGGAAIAHCCEGLCEQPDAPDTSGASPRGGL*
Ga0073928_100665114	3300006893	Iron-Sulfur Acid Spring	MLCETCRWTERPGFIRRPAKPDPGPAAAPDDAADFIPCPDCGGAAIAHCCEGLCEQPAPDAPGELPPGRR*
Ga0073928_104590631	3300006893	Iron-Sulfur Acid Spring	MLCETCRWTERPGFIRRPAKPDPAAPRDQAADFIPCPDCGGQAIAHCCEGLCEQPDAPGALPQSGR*
Ga0073928_109920071	3300006893	Iron-Sulfur Acid Spring	SAMLCETCRWTERPGFIRRPAKPDPAPAARREEAADFIPCPDCGGQAIAHCCEGLCEQPEPDAPGVLPLGRR*
Ga0116222_12504242	3300009521	Peatlands Soil	MLCETCRWTERSGFIRRPAKADPDPAAARDEAADFIPCPDCGGQAIAHCCEGLCEQPEPDAPGALPLGGQ*
Ga0116221_13012003	3300009523	Peatlands Soil	MLCETCRWTERPGFIRRPAEPDTAPAAKRDEAADFIPCPDCGGQAIAHCCEGLCEHPGPDDPGASGATGASPRGGPNPVE
Ga0116216_104249211	3300009698	Peatlands Soil	MLCETCRWTERSGFIRRPAKADPDPAAARDEAADFIPCPDCGGAAIAHCCEGLCEQPEPDAQGAPGALPLG
Ga0116217_108059051	3300009700	Peatlands Soil	MLCETCRWTERSGFIRRPAKADPDPAAARDEAADFIPCPDCGGHAIAHCCEGLCEQPEPDAPGASGASPFGGL*
Ga0116223_104016951	3300009839	Peatlands Soil	SAMLCETCRWTERPGFIRRPAKPDPGPAAPRDEAADFIPCPDCGGAAIAHCCEGLCEQPDAPDALPLGGQ*
Ga0074044_109454121	3300010343	Bog Forest Soil	MLCETCRWTERPGFIRRPAKPDPGPAAPRDEAADFIPCPDCGGHAIAHCCEGLCEQP
Ga0136449_1015312572	3300010379	Peatlands Soil	MLCDTCRWTERPGFVRRRQAAGAAAAADEAADFIPCPDCGGQAIAHCCEGLCEQPEADWPDGQT*
Ga0136449_1019940762	3300010379	Peatlands Soil	MLCETCRWTERPGFVRRPKSSPAAGEGASFIPCPDCGGQAIAHCCEGLCEQPDRDTTGG*
Ga0136449_1025220371	3300010379	Peatlands Soil	MLCETCRWTERPGFVRRPAKPDAGPMSHRVEAADFIPCPDCGGQAIAHCCEGLCEQPDADAPGASEASPRGGL*
Ga0136449_1031841532	3300010379	Peatlands Soil	MLCETCRWTERPGFIRRPAKPDPGPAAARDEAADFIPCPDCGGHAIAHCCEGLCEQPEPDAPGASGASPFGGL*
Ga0136449_1032571742	3300010379	Peatlands Soil	MLCETCRWTERPGFIRRPAKPDPGPAAPQDQAADFIPCPDCGGQAIAHCCEGLCEQPDAPGESAASGESPLGRL*
Ga0136449_1042704321	3300010379	Peatlands Soil	MLCETCRWTERPGFIRRQAGPVPGPAAARDEAADFIPCPDCGGQAIAHCCEGLCEQPEPDAQGAPGALPLGGQ*
Ga0134126_122698962	3300010396	Terrestrial Soil	MICHLLRGETMLCDTCRWTERPGFIRRSGVAADTPEFMPCPECGGQAIAHCCEGLCEQPDIGPQAVEE*
Ga0137776_18130511	3300010937	Sediment	MLCETCRWTERPGFIRRPAKPDPGPAAARDQAADFIPCPDCGGHAIAHCCEGLCEQPEPDAPGASAASG
Ga0137390_106146721	3300012363	Vadose Zone Soil	MLCETCRWTERPGFIRRPAKPDSGPAARRDRAADFIPCPDCGGQGIAHCCEGLWEQPEPDASAALPLGR
Ga0181532_106643402	3300014164	Bog	MTADIRASAMLCETCRWTERPGFIRRPAKPDPGPTAPRDDTADFIPCPECGGQAIAHCCEGLCEQPDAPGALPRGGQ*
Ga0181526_109513831	3300014200	Bog	MLCETCRWTVRPGFIRRPAKPDLVPAAPRDEAADFIPCPDCGGQAIAHCCEGLCEQPDAPGASGTSPLGGQ*
Ga0182024_100830883	3300014501	Permafrost	MAAMLCETCRWTERPGFIRRPKSAPGEADDFIPCPECGGQAIAHCCEGLCEQPEGDLPGAE*
Ga0182024_105158901	3300014501	Permafrost	MLCDTCRWTERPGFVRRPATPVAPVVGSLPLPGGPAAEFIPCPDCGGQAIAHCCEGLCEQPEADAPG*
Ga0182024_109571002	3300014501	Permafrost	MLCETCRWTERPGFIRRPAKPDPGPAAPRDEAADFIPCLDCGGQAIAHCCEGLCEQPEPDAPGALPFGGR*
Ga0181522_100181654	3300014657	Bog	MTADIGACSLGGKQRLGASAMLCETCRWTERPGFVRSPAKPNPGPAAVRDEAADFIPCPDCGGAAIAHCCEGLCEQPEPDAPDASGASPLGG
Ga0181522_108065572	3300014657	Bog	LGGKQRLGASAMLCETCRWTERPGFVRRPAKLDPAPVAARDEAADFIPCPDCGGAAIAHCCEGLCEQPDAPDTSGASEASPRGGL*
Ga0187782_106869891	3300017975	Tropical Peatland	VGAGIEPRRQRDTTMLCETCRWSERPGFIRRPTPPTSEDTTPRPIAADQAAADFIPCPDCGGQAIAHCCEGLCEQPETDATGVRA
Ga0187859_102749912	3300018047	Peatland	MLCETCRWTERPGFIRRPAKPDPGPAAAQDQAADFIPCPDCGGHAIAHCCEGLCEQ
Ga0187858_100200677	3300018057	Peatland	ETCRWTERPGFVRRPAKLDPAPVAARDEAADFIPCPDCGGQAIAHCCEGLCEQPGPDAPGASGATGASPRGGL
Ga0193726_100026232	3300020021	Soil	MLCETCRWTERPGFIRRPAKPDPGSAAAQDEAAAFIPCPDCGGQAIAHCCEGLCEQPEPDAPTALPPGGQ
Ga0210403_112603352	3300020580	Soil	MLCETCRWTERPGFIRRPAKPNPGPAAPRNEAADFIPCPDCGGAAIAHCCEGLCEQPAPDAPEELPSGRR
Ga0210399_106559772	3300020581	Soil	MLCETCRWTERPGFIRRPAKPDSGPAAPRDQAADFIPCPDCGGQAIAHCCEGLCEQPDAPGASPRGGR
Ga0210395_1000610311	3300020582	Soil	MLCETCRWTERPGFVRRPAKPDPGPVAPRDEAADFIPCPDCGGQAIAHCCEGLCEQPDAPGESGALPRGGL
Ga0210395_101439632	3300020582	Soil	MLCETCRWTERPGFIRRPAKPTPGPAARQDDAAAFIPCPDCGGQAIAHCCEGLCEQPEPDAPGALPLGRR
Ga0210401_107745351	3300020583	Soil	MLCETCRWTERPGFIRRPAEPDPGPAAPRDQAADFIPCPDCGGQAIAHCCEGLCEQPDAPGASPRGGR
Ga0210404_105819292	3300021088	Soil	MLCETCRWTERPGFIRRPAKPTPDPAARQDDAAAFIPCPDCGGQAIAHCCEGLCEQPEPDAPGASPLGRR
Ga0210385_100105272	3300021402	Soil	MLCDTCRWTERPGFIRRQPATTAQQQDDGLDFIPCPECGGQAVVHCCEGLCEQPEPAERS
Ga0210397_108005222	3300021403	Soil	MLCETCRWTERPGFIRRPAKPTPGPAARQDDAAAFIPCPDCGGQAIAHCCEGLCEQPEPDAPGALPLGR
Ga0210389_110408761	3300021404	Soil	ERPGFIRRQPATATQQQDDGLFIPCPECGGQAVAHCCEGLCEQPEPAEPGG
Ga0210389_111051742	3300021404	Soil	MLCETCRWTERPGFIRRPAKPDPAAPPDEAADFIPCPDCGGQAIAHCCEGLCEQPDAPGALPRGGR
Ga0210387_118862522	3300021405	Soil	MLCETCRWTERPGFVRRPAKPDPGTAAPREEAADFIPCPDCGGHAIAHCCEGLCEQPDAPDALPLGRQKPVKMAAVLEPRQQGERR
Ga0210383_115584002	3300021407	Soil	MLCETCRWTERPGFVRRPAKPDPGHAASRDEAADYIPCPDCGGQAIAHCCEGLCEQPEATGASGASGALPRG
Ga0210394_108191352	3300021420	Soil	MLCETCRWTERPGFIRGPAKPDPGPARLRDEAADFIPCPDCGGQAIAHCCEGLCEQPDAPGASGASGASPLGGQ
Ga0210394_113624621	3300021420	Soil	MLCETCRWTERPGFVRRPAKPDPGPVAPRDEAADFIPCPDCGGQAIAHCCEGLCEQPDAPGASGALPRSGL
Ga0210384_103349982	3300021432	Soil	MLCETCRWTERPGFVRRPVKPDPGPAAPRDEAADFIPCPDCGGQAIAHCCEGLCEQ
Ga0210391_113096091	3300021433	Soil	MLCDTCRWTERPGFIRRQPATATQQQDDGLDFVPCPDCGGQAVAHCCEGLCEQPEPTEPS
Ga0210398_100521592	3300021477	Soil	MLCETCRWTERPGFVRRSAKPDPGPVAPRDEAADFIPCPDCGGQAIAHCCEGLCEQPDAPGASGALPRGGL
Ga0210402_110785972	3300021478	Soil	MLCETCRWTERPGFIRRPAEPDPGLAARGETTDFIPCPDCGGAAIAHCCEGLCEQPEPDAPGALPIGGQ
Ga0213853_110366871	3300021861	Watersheds	WTERPGFIRRPAEPDPGPAAARDKAADFIPCPDCGGAAIAHCCEGLCEQPEPDAPGASLLGGQ
Ga0212123_100762932	3300022557	Iron-Sulfur Acid Spring	MLCETCRWTERPGFIRRAPTPDPGSAAARDEAAAFVPCPDCGGQAIAHCCEGLCEQPESDAPGALPLGGQ
Ga0212123_104428461	3300022557	Iron-Sulfur Acid Spring	MLCETCRWTERPGFIRRPAKPDPAAPRDQAADFIPCPDCGGQAIAHCCEGLCEQPDAPGALPQSGR
Ga0212123_106599212	3300022557	Iron-Sulfur Acid Spring	MLCETCRWTERPGFIRRPAKPDPGPAALRDEAADFIPCPDCGGAAIAHCCEGLCEQPAPDAPGELPPGRR
Ga0224564_10022132	3300024271	Soil	MLCETCRWTERPGFIRRPAKPDPGPAAPRDEAADFIPCPDCGGQAIAHCCEGLCEQPDASGASGASSIGGQ
Ga0207699_107798442	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MLCETCRWTERPGFIRRPAETAAGAVARQGDAADFIPCPDCGGQAIAHCCEGLCEQPEAD
Ga0207699_108106501	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MICDTCRWTERPGFIRRPAEPIGTPEFIPCPECGGQAIAHCCEGLCEQPDLGQRVDEE
Ga0208240_10195462	3300027030	Forest Soil	MLCETCRWTERPGFIRRPAEPDPGPAAARDEAADFIPCPDCGGQAIAHCCEGLCEQPDAPGASPRGGR
Ga0208604_10000716	3300027090	Forest Soil	MLCETCRWTERPGFIRRPAKPDPGPAAPRDEAAAFIPCPDCGGQAVAHCCEGLCEQPAPDAPGELPPGRR
Ga0208099_10024892	3300027096	Forest Soil	MLCETCRWTERPGFIRRPAKPDPGPAAPRDEAADFIPCPDCGGQAIAHCCEGLCEQPDAPGALPRGGQ
Ga0209010_10019182	3300027370	Forest Soil	MLCETCRWTERPGFIRRPAKPDPGPAAPPDEAADFIPCPDCGGQAIAHCCEGLCEQPEAPDASGASPRGGL
Ga0209219_10370792	3300027565	Forest Soil	MLCETCRWTERSGFVRRPAKPDPAPAAARDEAADFIPCPECGGQAIAHCCEGLCEQPEPDAPGTSGVSPLGGQ
Ga0209115_10111522	3300027567	Forest Soil	MLCETCRWTERPGFIRRPAKPDPGPAAARCEAADFIPCPDCGGQTIAHCCEGLCEQPDAPGALPRGGP
Ga0209422_10596581	3300027629	Forest Soil	MLCETCRWTERPGFIRGPAKSDPGPAPPRDEAADFIPCPDCGGQAIAHCCEGLCEQPDAPGAPGESGASP
Ga0209736_11499912	3300027660	Forest Soil	MLCETCRWTERPGFIRRPAKPDPGPAALRDEAADFIPCPDCGGAAIAHCCEGLCEQPEPDAPGTLPLGRQ
Ga0209011_10063412	3300027678	Forest Soil	MLCETCRWTERPGIIRRPANPDPGPAARRDEAADFIPCPECGGAAIAHCCEGLCEQPEPDAPGTLPLSRQ
Ga0209626_10069262	3300027684	Forest Soil	MLCETCRWTERPGFIRRPAKPDPGPAAPRDEAAAFIPCPDCGGQAIAHCCEGLCEQPAPDAPGELPSGRR
Ga0209626_11624522	3300027684	Forest Soil	MLCETCRWTERPGFIRRPAKPDPGPAAPRDEAAAFIPCPDCGGAAIAHCCEGLCEQPEPDTPVELPPGRR
Ga0209580_10000040124	3300027842	Surface Soil	MLCETCRWTERPGFVRRPAETAAGPVARQGDAADFIPCPDCGGQAIAHCCEGLCEQPEADAPGASGASGASGASPLGGQ
Ga0209693_100125892	3300027855	Soil	MLCETCRWTERPGFVRRPAKPDPGPAAPPDEAADFIPCPDCGGAAIAHCCEGLCEQPDAPGASGALPRGGQ
Ga0209579_101214562	3300027869	Surface Soil	MLCETCRWTERPGFIRRPAKPDPGPAAARDDAADFIPCPDCGGHAIAHCCEGLCEQPEPDAPGASATSPRGGL
Ga0209169_100342053	3300027879	Soil	MLCETCRWTERPGFVRRPAKPDPGPAAARDEAADFIPCPDCGGQAIAHCCEGLCEQPEATGASGASGALPRGGQ
Ga0209275_100414033	3300027884	Soil	MLCETCRWTERPGFIRRPAKPDPDPAAPRARAPDFIPCPDCGGQAIAHCCEGLCEQPDAPGALPRGGR
Ga0209380_101941532	3300027889	Soil	MLCETCRWTERPGFVRRPAKPDPGPAAARDEAADFIPCPDCGGQAIAHCCEGLCEQPDAPGTSGASEASPRDGL
Ga0209624_108497181	3300027895	Forest Soil	AGQPLNRRIKAIAMLCETCRWTERPGFIRKPAVSAARQDRDEPDFIPCPDCGGQSVAHCCEGLCEQPEPEGREPGG
Ga0209006_105057673	3300027908	Forest Soil	MLCETCRWTERPGFIRRPAEPDPDPTAPRDEAADFIPCPDCGGHAIAHCCEGLCEQPEPDAPGALPLGG
Ga0209526_100471732	3300028047	Forest Soil	MLCETCRWTERPGFVRRPAKPDPGPAARREEAADFVPCPDCGGAAIAHCCEGLCEQPEPDAPGTLPFGGQ
Ga0308309_101204032	3300028906	Soil	MLCETCRWTERSGFVRRPAKPDPGHAASRDEAADYIPCPDCGGQAIAHCCEGLCEQPEATGASGALPRGGL
Ga0308309_102351373	3300028906	Soil	DLGTAMFCDTRRWTERPGFVRRPATPVTPDVGSLPPPGSEAAAFVPCPDCGGQAIAHCCEGLCEQPEADTHG
Ga0311353_107502411	3300030399	Palsa	MLCETCRWTERPGFIPRPPVSAARQDRDEPDFIPCPDCGGQAVAHCCEGLCEQPEPEGPEPSG
Ga0170834_1078813093	3300031057	Forest Soil	MLCDTCRWTERPGFIRRQPATTAQQQDDGLDFIPCPECGGQAVAHCCEGLCEQPEPSERN
Ga0265760_102022482	3300031090	Soil	ASAMLCETCRWTERPGFIRRPAKPDPGPAAPRDEAADFIPCPDCGGQAIAHCCEGLCEQPDASGASGASGASSIGGQ
Ga0170822_130002242	3300031122	Forest Soil	MLCETCRWTERPGFIRRPAKPDPAAPRDEAADFIPCPDCGGQAIAHCCEGLCEQPDAPGALSRGGR
Ga0170824_1008323392	3300031231	Forest Soil	MLCETCRWTERPGFIRRPAKPDPAAPRDEAADFIPCPDCGGQAIAHCCEGLCEQPDAPGALPRGGR
Ga0265340_102329242	3300031247	Rhizosphere	WTERPGFIRRPAKPDPGPAAPRDEAADFIPCPDCGGAAIAHCCEGLCEQPEPDAPGALPLGRQ
Ga0302320_107127071	3300031524	Bog	EASPMLCETCRWTERPGFVRQAAVSAGRQDRDQPVFIPCPDCGGQTVAHCCEGLCEQPAPDGPEPGV
Ga0310686_1134478282	3300031708	Soil	MLCETCRWTERPGFIRRPAKPDPGPAAPRDEAADFIPCPDCGGQAIAHCCEGLCEQPDASGASGASGASSIGGQ
Ga0307476_1000043928	3300031715	Hardwood Forest Soil	MLCETCRWTERPGFIRRPAKSDPGPAPPRDEAADFIPCPDCGGQAIAHCCEGLCEQPDAPGAPGASPLGGQ
Ga0307477_104326632	3300031753	Hardwood Forest Soil	MLCETCRWTERPGFIRRPTEPDTAPAAKREEAADFIPCPDCGGQAIAHCCEGLCEQPEPDAPGALPIGGQ
Ga0311301_113366322	3300032160	Peatlands Soil	MLCETCRWTERSGFIRRPAKADPDPAAARDEAADFIPCPDCGGAAIAHCCEGLCEQPDASGTSPIGGL
Ga0311301_119397922	3300032160	Peatlands Soil	MLCETCRWTERPGFIRRPAKPDPGPAAARDEAADFIPCPDCGGHAIAHCCEGLCEQPEPDAPGASGASPFGGL
Ga0311301_121587992	3300032160	Peatlands Soil	MLCETCRWTERPGFIRSPAKPDPGAAAAQNQAADFIPCPDCGGQAIAHCCEGLCEQPDADAPGASEA
Ga0335079_105448832	3300032783	Soil	MLCDTCRFSERPGFIRRPVAASVGTAGGAATEFIPCPDCGGQAIAHCCEGLCEQPDADVAQPSFL
Ga0335078_118764942	3300032805	Soil	MLCETCRWTERPGFIRRPAKPDPGPAAARDEAADFIPCPDCGGHTIAHCCEGLCEQPGPDAPGTSQASRPGGL
Ga0335081_100286625	3300032892	Soil	MLCDTCRFSERPGFIRRPVAASVGTAGGAATEFIPCPDCGGQAIAHCCEGLCEQPDADVAQPSFLRRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082996

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences