NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F082995

Metagenome / Metatranscriptome Family F082995

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F082995
Family Type Metagenome / Metatranscriptome
Number of Sequences 113
Average Sequence Length 106 residues
Representative Sequence MGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFEAVRELDSVKASKMQRSTSQAQVASPM
Number of Associated Samples 84
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 71.68 %
% of genes near scaffold ends (potentially truncated) 29.20 %
% of genes from short scaffolds (< 2000 bps) 68.14 %
Associated GOLD sequencing projects 75
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil
(12.389 % of family members)
Environment Ontology (ENVO) Unclassified
(22.124 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(64.602 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.41%    β-sheet: 0.00%    Coil/Unstructured: 52.59%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF00255GSHPx 20.35
PF00120Gln-synt_C 7.96
PF14437MafB19-deam 2.65
PF00654Voltage_CLC 2.65
PF00069Pkinase 2.65
PF00571CBS 1.77
PF00180Iso_dh 1.77
PF08335GlnD_UR_UTase 1.77
PF02661Fic 0.88
PF01230HIT 0.88
PF00248Aldo_ket_red 0.88
PF00480ROK 0.88
PF01862PvlArgDC 0.88
PF07244POTRA 0.88
PF03330DPBB_1 0.88
PF01266DAO 0.88
PF03466LysR_substrate 0.88
PF00126HTH_1 0.88
PF13431TPR_17 0.88
PF04264YceI 0.88
PF13177DNA_pol3_delta2 0.88
PF13620CarboxypepD_reg 0.88
PF01156IU_nuc_hydro 0.88
PF03054tRNA_Me_trans 0.88
PF01243Putative_PNPOx 0.88
PF07681DoxX 0.88
PF00383dCMP_cyt_deam_1 0.88
PF10131PTPS_related 0.88
PF13432TPR_16 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 113 Family Scaffolds
COG0386Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxidesDefense mechanisms [V] 20.35
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 10.62
COG0038H+/Cl- antiporter ClcAInorganic ion transport and metabolism [P] 2.65
COG1940Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domainTranscription [K] 1.77
COG2844UTP:GlnB (protein PII) uridylyltransferaseSignal transduction mechanisms [T] 1.77
COG0482tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domainTranslation, ribosomal structure and biogenesis [J] 0.88
COG1945Pyruvoyl-dependent arginine decarboxylaseAmino acid transport and metabolism [E] 0.88
COG1957Inosine-uridine nucleoside N-ribohydrolaseNucleotide transport and metabolism [F] 0.88
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 0.88
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 0.88
COG4270Uncharacterized membrane proteinFunction unknown [S] 0.88


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001356|JGI12269J14319_10006430All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis10201Open in IMG/M
3300001401|JGI20189J14885_1000029All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia46705Open in IMG/M
3300001593|JGI12635J15846_10003398All Organisms → cellular organisms → Bacteria → Acidobacteria13853Open in IMG/M
3300004091|Ga0062387_100173253All Organisms → cellular organisms → Bacteria1271Open in IMG/M
3300004091|Ga0062387_100345413All Organisms → cellular organisms → Bacteria979Open in IMG/M
3300004152|Ga0062386_100470259All Organisms → cellular organisms → Bacteria → Terrabacteria group → Abditibacteriota1018Open in IMG/M
3300004475|Ga0068969_1065748All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300004631|Ga0058899_12122622All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300005529|Ga0070741_10000514All Organisms → cellular organisms → Bacteria138829Open in IMG/M
3300005534|Ga0070735_10941569All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300005944|Ga0066788_10003485All Organisms → cellular organisms → Bacteria3106Open in IMG/M
3300005944|Ga0066788_10022182All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1410Open in IMG/M
3300005950|Ga0066787_10002429All Organisms → cellular organisms → Bacteria2644Open in IMG/M
3300005994|Ga0066789_10140291All Organisms → cellular organisms → Bacteria → Acidobacteria1029Open in IMG/M
3300005994|Ga0066789_10390143All Organisms → cellular organisms → Bacteria → Acidobacteria582Open in IMG/M
3300005995|Ga0066790_10047540All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1858Open in IMG/M
3300005995|Ga0066790_10268137All Organisms → cellular organisms → Bacteria → Acidobacteria728Open in IMG/M
3300006057|Ga0075026_100558591All Organisms → cellular organisms → Bacteria → Acidobacteria667Open in IMG/M
3300006176|Ga0070765_100170392All Organisms → cellular organisms → Bacteria1957Open in IMG/M
3300006860|Ga0063829_1039643All Organisms → cellular organisms → Bacteria → Acidobacteria605Open in IMG/M
3300006893|Ga0073928_10007978All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae13467Open in IMG/M
3300006893|Ga0073928_10215919All Organisms → cellular organisms → Bacteria1490Open in IMG/M
3300009700|Ga0116217_10030379All Organisms → cellular organisms → Bacteria4123Open in IMG/M
3300009839|Ga0116223_10818429All Organisms → cellular organisms → Bacteria → Acidobacteria532Open in IMG/M
3300010379|Ga0136449_101062160All Organisms → cellular organisms → Bacteria → Acidobacteria1294Open in IMG/M
3300010379|Ga0136449_104492217All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M
3300010877|Ga0126356_11258798All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300010880|Ga0126350_11950090All Organisms → cellular organisms → Bacteria → Acidobacteria520Open in IMG/M
3300011120|Ga0150983_10374996All Organisms → cellular organisms → Bacteria → Acidobacteria517Open in IMG/M
3300011120|Ga0150983_12503283All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300011120|Ga0150983_12823442All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300012944|Ga0137410_10164941All Organisms → cellular organisms → Bacteria1697Open in IMG/M
3300013296|Ga0157374_11483462All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300013832|Ga0120132_1046564All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300014489|Ga0182018_10020276All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4404Open in IMG/M
3300014489|Ga0182018_10397780All Organisms → cellular organisms → Bacteria → Acidobacteria737Open in IMG/M
3300014495|Ga0182015_10032217All Organisms → cellular organisms → Bacteria → Acidobacteria4031Open in IMG/M
3300014501|Ga0182024_10007142All Organisms → cellular organisms → Bacteria → Acidobacteria24171Open in IMG/M
3300014501|Ga0182024_10077418All Organisms → cellular organisms → Bacteria4982Open in IMG/M
3300014501|Ga0182024_10087513All Organisms → cellular organisms → Bacteria → Acidobacteria4604Open in IMG/M
3300014501|Ga0182024_10254227All Organisms → cellular organisms → Bacteria → Acidobacteria2354Open in IMG/M
3300014501|Ga0182024_10297916All Organisms → cellular organisms → Bacteria → Acidobacteria2134Open in IMG/M
3300014502|Ga0182021_10553507All Organisms → cellular organisms → Bacteria → Acidobacteria1375Open in IMG/M
3300014838|Ga0182030_10190848All Organisms → cellular organisms → Bacteria2480Open in IMG/M
3300014839|Ga0182027_11860786All Organisms → cellular organisms → Bacteria → Acidobacteria580Open in IMG/M
3300015193|Ga0167668_1027412All Organisms → cellular organisms → Bacteria1265Open in IMG/M
3300017943|Ga0187819_10011635All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE00684999Open in IMG/M
3300017955|Ga0187817_10086239All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE00681966Open in IMG/M
3300018007|Ga0187805_10203118All Organisms → cellular organisms → Bacteria → Acidobacteria905Open in IMG/M
3300018007|Ga0187805_10259543All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium797Open in IMG/M
3300019194|Ga0184586_132305All Organisms → cellular organisms → Bacteria → Acidobacteria534Open in IMG/M
3300019786|Ga0182025_1055618All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium557Open in IMG/M
3300019887|Ga0193729_1040733All Organisms → cellular organisms → Bacteria → Acidobacteria1921Open in IMG/M
3300019890|Ga0193728_1080670All Organisms → cellular organisms → Bacteria1532Open in IMG/M
3300020021|Ga0193726_1001435All Organisms → cellular organisms → Bacteria → Acidobacteria18801Open in IMG/M
3300020021|Ga0193726_1011367All Organisms → cellular organisms → Bacteria → Acidobacteria4770Open in IMG/M
3300020021|Ga0193726_1083443All Organisms → cellular organisms → Bacteria1470Open in IMG/M
3300020021|Ga0193726_1119697All Organisms → cellular organisms → Bacteria1174Open in IMG/M
3300020021|Ga0193726_1132781All Organisms → cellular organisms → Bacteria → Acidobacteria1099Open in IMG/M
3300020061|Ga0193716_1110835All Organisms → cellular organisms → Bacteria → Acidobacteria1162Open in IMG/M
3300020580|Ga0210403_10003152All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae14615Open in IMG/M
3300021168|Ga0210406_10868145All Organisms → cellular organisms → Bacteria → Acidobacteria681Open in IMG/M
3300021171|Ga0210405_10324181All Organisms → cellular organisms → Bacteria1216Open in IMG/M
3300021181|Ga0210388_10564956All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300021403|Ga0210397_10223293All Organisms → cellular organisms → Bacteria1356Open in IMG/M
3300021420|Ga0210394_10152128All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2011Open in IMG/M
3300021420|Ga0210394_11302254All Organisms → cellular organisms → Bacteria → Acidobacteria621Open in IMG/M
3300021432|Ga0210384_11589491All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300022513|Ga0242667_1005521All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium999Open in IMG/M
3300022557|Ga0212123_10077715All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2820Open in IMG/M
3300022557|Ga0212123_10915604All Organisms → cellular organisms → Bacteria → Acidobacteria515Open in IMG/M
3300023672|Ga0247553_105912All Organisms → cellular organisms → Bacteria → Acidobacteria643Open in IMG/M
3300024288|Ga0179589_10225085All Organisms → cellular organisms → Bacteria → Acidobacteria827Open in IMG/M
3300025320|Ga0209171_10496564All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300025505|Ga0207929_1013173All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1560Open in IMG/M
3300025664|Ga0208849_1000420All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae40105Open in IMG/M
3300025664|Ga0208849_1066092All Organisms → cellular organisms → Bacteria1058Open in IMG/M
3300026214|Ga0209838_1028581All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300026294|Ga0209839_10104514All Organisms → cellular organisms → Bacteria → Acidobacteria965Open in IMG/M
3300026294|Ga0209839_10168365All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300027565|Ga0209219_1002292All Organisms → cellular organisms → Bacteria → Acidobacteria3709Open in IMG/M
3300027745|Ga0209908_10003767All Organisms → cellular organisms → Bacteria → Acidobacteria2121Open in IMG/M
3300027812|Ga0209656_10253005All Organisms → cellular organisms → Bacteria → Terrabacteria group → Abditibacteriota832Open in IMG/M
3300027854|Ga0209517_10454390All Organisms → cellular organisms → Bacteria → Acidobacteria707Open in IMG/M
3300027895|Ga0209624_10722994All Organisms → cellular organisms → Bacteria → Acidobacteria656Open in IMG/M
3300027905|Ga0209415_10005244All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae23359Open in IMG/M
3300028450|Ga0189898_1025292All Organisms → cellular organisms → Bacteria → Acidobacteria616Open in IMG/M
3300028450|Ga0189898_1039413All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300030707|Ga0310038_10184025All Organisms → cellular organisms → Bacteria → Acidobacteria1009Open in IMG/M
3300030969|Ga0075394_11922211All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300030991|Ga0073994_12159330All Organisms → cellular organisms → Bacteria → Acidobacteria688Open in IMG/M
3300031231|Ga0170824_115609016All Organisms → cellular organisms → Bacteria → Acidobacteria1213Open in IMG/M
3300031236|Ga0302324_100991229All Organisms → cellular organisms → Bacteria → Acidobacteria1143Open in IMG/M
3300031708|Ga0310686_110429533All Organisms → cellular organisms → Bacteria2820Open in IMG/M
3300031718|Ga0307474_11081049All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300031753|Ga0307477_10000005All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae434796Open in IMG/M
3300031753|Ga0307477_10394491All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300031823|Ga0307478_10587692All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium931Open in IMG/M
3300031962|Ga0307479_10708047All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300032119|Ga0316051_1018060All Organisms → cellular organisms → Bacteria → Acidobacteria633Open in IMG/M
3300032120|Ga0316053_112104All Organisms → cellular organisms → Bacteria → Acidobacteria615Open in IMG/M
3300032160|Ga0311301_10027157All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae15255Open in IMG/M
3300032160|Ga0311301_12556180All Organisms → cellular organisms → Bacteria → Acidobacteria569Open in IMG/M
3300032515|Ga0348332_14450826All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1983Open in IMG/M
3300032770|Ga0335085_10032790All Organisms → cellular organisms → Bacteria7213Open in IMG/M
3300032770|Ga0335085_10034109All Organisms → cellular organisms → Bacteria7050Open in IMG/M
3300032770|Ga0335085_10150127All Organisms → cellular organisms → Bacteria2924Open in IMG/M
3300032783|Ga0335079_10011099All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae10260Open in IMG/M
3300032783|Ga0335079_10288061All Organisms → cellular organisms → Bacteria1795Open in IMG/M
3300032805|Ga0335078_10005226All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis19185Open in IMG/M
3300032805|Ga0335078_10670113All Organisms → cellular organisms → Bacteria → Acidobacteria1292Open in IMG/M
3300032828|Ga0335080_10035206All Organisms → cellular organisms → Bacteria5493Open in IMG/M
3300034163|Ga0370515_0001391All Organisms → cellular organisms → Bacteria12150Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil12.39%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.73%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil8.85%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil7.08%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil6.19%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost5.31%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring4.42%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.42%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil3.54%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.54%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil3.54%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa2.65%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.77%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.77%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen1.77%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.77%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.89%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.89%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.89%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.89%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.89%
Thawing PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost0.89%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.89%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.89%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.89%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300001401Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004475Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005944Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048EnvironmentalOpen in IMG/M
3300005950Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006860Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010877Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013832Permafrost microbial communities from Nunavut, Canada - A3_5cm_0MEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014839Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015193Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300019194Soil microbial communities from Bohemian Forest, Czech Republic ? CSE1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300020061Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300022513Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300023672Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025320Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025505Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025664Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300026214Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)EnvironmentalOpen in IMG/M
3300026294Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027745Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2MEnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300028450Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030969Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032119Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032120Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12269J14319_1000643083300001356Peatlands SoilESATHMGQEVSVSYQAVKSKVYKLIDALVEDIKTEGDVQESMKRWWKLIHPADRPVARKYLLAVLQKSNASLEAITDGLVDFKEFERTREPETVKPPKLQRLASQAQAVSPM*
JGI20189J14885_1000029243300001401Arctic Peat SoilMGQEVSVSYQAVKSKVYKLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLERSNASLEAISDGLLEFTTSETEPAKLAKLHTVSPQTQIGTRI*
JGI12635J15846_10003398133300001593Forest SoilLASVLPQATGEQNMGQEVSISYQAVKSKVYKLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVAKKYLMMVLEKSNASLEAISDGLLQFAEGQPEPAKLPKLHTSVTDQAQVQSRI*
Ga0062387_10017325313300004091Bog Forest SoilMGQEISVSYQAVKSKVYKLIDALVEDAKTEGDVQESVKRWWKLVHPADRPVARKYLLLVLARSNASLEAITDSLLEFKEFETVSDSDAQRMAKLPALASHAQISSRI*
Ga0062387_10034541323300004091Bog Forest SoilMGQEISVSYQAVKSKVYKLIDALVEDAKTEGDVQESVKRWWKLVHPADRPVARKYLLMVLARSNASLEAITDSLLQFKEFEAMPESETDKLHKIPSLANHAQVGSRI*
Ga0062386_10047025923300004152Bog Forest SoilMGQEVSVSYQAVKSKVYKLIDALVEDMKTEGDVQESMKRWWKLVHPADRPVARKYLLMVLAKSNASLEAITDGVLSFKEFDAADVGVVKAPKIQRAVSQAQMAGPM*
Ga0068969_106574813300004475Peatlands SoilMGQEVSISYQAVKSKVYKLIDALVEDMKTEGDVQESMKRWWKLVHPADRPVARKYLLMVLQKSNASLEAITDGLVAFKEFEEVRELDSAKAPKMQRVGSQAQVASPM*
Ga0058899_1212262223300004631Forest SoilMGQEVSISYQAVKSKVYRLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLEKSNASLEAISDGLLQFAEGQPEPQKLSKLHTSVADQAQVQSRI*
Ga0070741_100005141263300005529Surface SoilMGQEVSVSYQAVKSKVYKLIDALVEDAKSEGDVQESMKRWWKLIHPADRPVARKYLLTVLAKSNATLEAISEGLVQFKDFESIREPYVEKIAKPPITASHSQLSSV*
Ga0070735_1094156913300005534Surface SoilGQEVSVSYQAVKSKVYKLMDAMVEDIKNQGDVQESMKRWWKLIHPADRPIARKYLLSVLQKSSATLNAISDGLEVFQEFEAVTHTVAIKPQRVPGPEQIATTM*
Ga0066788_1000348523300005944SoilMGQEISVSYQAVKSKVYKLIDALVEDAKTEGDVQESVKRWWKLVHPADRPVARKYLLMVLARSNASLEAITDSLLQFKEFEAVTDSDSEKLHKMPTLASHAQVGSRV*
Ga0066788_1002218223300005944SoilMGQEVSVSYQAVKSKVYKLIDALVEDAKTRGDVQDSVKRWWKLVHPVDRPVARKYLLMVLEKSNASLEAISDGLLQFTEGETEPAKLAKLHAMPEQTQISSRI*
Ga0066787_1000242933300005950SoilMGQEISVSYQAVKSKVYKLIDALVEDAKTEGDVQESVKRWWKLVHPADRPVARKYLLMVLARSNASLEAITDSLLQFKEFEAMSDSDSDKLHKIPTLASHAQVGSRI*
Ga0066789_1014029123300005994SoilLHLKSLGLATVLHVPFPESAKPMGQEVSVSYQAVKSKVYKLIDALVEDIKTEGDVQESMKRWWKLVHPADRPVARKYLLAVLQKSNASLEAITDGMVDFKEFEKVRQPEPIKPPKMQRLASQAHVASPM*
Ga0066789_1039014323300005994SoilKSKVYKLIDALVEDIKTEGDVQESMKRWWKLVHPADRPVARKYLLAVLQKSNASLEAITDGLVDFKEFEKVRQPEPIKPPKMQRLASQAHVASPM*
Ga0066790_1004754013300005995SoilMGQEVSVSYQAVKSKVYKLIDALVEDAKTTGDVQDSVKRWWKLVHPADRPVARKYLMMVLEKSNASLEAISDGFSQFMEGETEPAKLSKLHPVPEQTQISSRI*
Ga0066790_1026813723300005995SoilPGERQPMGQEVSVSYQAVKSKVYKLIDALVEDIKTEGDVQESMKRWWKLVHPADRPVARKYLLAVLQKSNASLEAITDGLVDFKEFEKVRQPEPIKPPKMQRLASQAHVASPM*
Ga0075026_10055859113300006057WatershedsMYCCKTQHGGYVAMPQEVSISYQAVKSKVYKLIDALVEGVKTETEVQESMERWWKLIHPADRPVAQKYLLLVLARSSSSLGAIADGLVTFKEFRPAPQ
Ga0070765_10017039233300006176SoilMGQEISVSYQAVKSKVYKLIDALVEDAKTEGDVQESVKRWWKLVHPADRPVARKYLLMVLARSNASLEAITDGLLQFKEFETVTDSDPEKLAKLPALASHAQVSSRV*
Ga0063829_103964323300006860Peatlands SoilPHMGQEVSISYQAVKSKVYKLIDALVEDMKTEGDVQESMKRWWKLVHPADRPVARKYLLMVLQKSNASLEAITDGLVAFKEFEEVRELDSAKAPKMQRVGSQAQVASPM*
Ga0073928_1000797843300006893Iron-Sulfur Acid SpringMGQEVSISYQAVKSKVYKLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLEKSNASLEAISDGLLQFAEGQPEPQKLSKLHTSVTDQAQVQSRI*
Ga0073928_1021591943300006893Iron-Sulfur Acid SpringMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESVKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITVGLVGFKEFEAVRDLESVKASKMQRPTSQAQVASM*
Ga0116217_1003037943300009700Peatlands SoilMGQEVSVSYQAVKSKVYKLIDALVEDIKTEGDVQESMKRWWKLIHPADRPVARKYLLAVLQKSNASLEAITDGLVDFKEFERTREPETVKPPKLQRLASQAQAVSPM*
Ga0116223_1081842913300009839Peatlands SoilVYKLIDALVEDIKTEGDVQESMKRWWKLIHPADRPVARKYLLAVLQKSNASLEAITDGLVDFKEFERTREPETVKPPKLQRLASQAQAVSPMYKQLFVPGISNGD*
Ga0136449_10106216013300010379Peatlands SoilMESATPMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFDAVRDLESVKTPKMQRSTGQAQVASPM*
Ga0136449_10449221723300010379Peatlands SoilMGQEVSVSYQAVKSKVYKLIDAMVEDMKNQGDVQESMKRWWKLIHPADRPIARKYLLSVLQKSNATLAAINDGLVVFQEFEGGIDPITIKPQRVAASSQQVLTTM*
Ga0126356_1125879813300010877Boreal Forest SoilAMGQEISVSYQAVKSKVYKLIDALVEDAKTEGDVQESVKRWWKLVHPADRPVARKYLLLVLARSNASLEAITDSLLQFKEFEAVTDTDSEKLHKMPALASHAQLGSRI*
Ga0126350_1195009013300010880Boreal Forest SoilMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFDAVRDLESVKTPKMQRSTGQAQAASPM*
Ga0150983_1037499613300011120Forest SoilEKRFGESIALLPSTGAWAMGQEVSVSYQAVKSKVYKLIDALVEDAKTEGDVQESMKRWWKLIHPADRPVARKYLLTVLAKSNATLEAISEGLVQFKDFESIREPDVDKLPKPPITASHSQLSSGV*
Ga0150983_1250328313300011120Forest SoilMGQEVSISYQAVKSKVYRLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLEKSNASLEAISDGLLQFAEGQPEPPKLSKVHTSVSDQAQVQSRI*
Ga0150983_1282344213300011120Forest SoilMGEPAMGQEISVSYQAVKSKVYKLIDALVEDAKTEGDVQESVKRWWKLVHPADRPVARKYLLLVLARSNASLEAITDSLLQFKEFEAVSDADSEKLHKLPALASHAQLGSRV*
Ga0137410_1016494133300012944Vadose Zone SoilMGQEVSISYQAVKSRVYRLIDALVEGSKTEEDVQASVRRWWKLVHPADRPMAQKYLNTVLQKSNATLEAITDGLTDFKEFSGSREIEPVKAPRLRPVAGQNQASSPM*
Ga0157374_1148346223300013296Miscanthus RhizosphereQAVKSKVYKLIDAMVEDMKNQGDVQESMKRWWKLIHPADRPVARKYLVSVLQKSNATLEAITDGLGVFEEFEGGIDPITIKPHRVPAASQVLTTM*
Ga0120132_104656413300013832PermafrostMGQEVSVSYQAVKSKVYKLIDALVEDAKTTGDVQDSVKRWWKLVHPADRPVARKYLMMVLEKSNASLEAISDGFSQFTEGETDTPKLSKLPSLPEQAQISSRI*
Ga0182018_1002027613300014489PalsaMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFDTVRDLESVKASKMQRSTSQAQVASTM*
Ga0182018_1039778023300014489PalsaMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFEAVRELDSVKASKMQRSTSQAQVASPM*
Ga0182015_1003221753300014495PalsaMGQEVSISYQAVKSKVYKLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLERSNASLEAISDGLLQFTEGQPEPSKLPKLHSVPEQSQFGNRI*
Ga0182024_10007142213300014501PermafrostMGQEISVSYQAVKSKVYKLIDALVEDAKTEGDVQESVKRWWKLVHPADRPVARKYLLMVLARSNASLEAITDSLLQFKEFEAVTDSDSEKLPKLPALAGHAQISSRI*
Ga0182024_1007741813300014501PermafrostEVSVSYQAVKSKVYKLIDAMVEDIKNQGDVQESMKRWWKLIHPADRPIARKYLLSVLQKSNATLEAITDGLGVFQEFENRIDPITIKPQRVSSSSQIATTM*
Ga0182024_1008751323300014501PermafrostMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFDAVRDLESVKTPKMQRSTGQAQVASPM*
Ga0182024_1025422723300014501PermafrostMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQDSVKRWWKLVHPADRPVARKYLLEVLQKSNASLGAITDGLVGFKEFDAVRDLESMKASKMQRSTSQQQVASPM*
Ga0182024_1029791623300014501PermafrostMGQEVSVSYQAVKSKVYKLIDAMVEDMKSQGDVQESVKRWWKLIHPADRPIARKYLVSVLQKSNATLEAITDGLGVFQEFEGGVDPVTIKPQRMSGSSQIATSM*
Ga0182021_1055350713300014502FenMGQEVSVSYQAVKSKVYKLIDAMVEDMKNQGDVQESMKRWWKLIHPADRPIARKYLLSVLQKSNATLAAINDGLVVFQEFEGGMDPITIKPQRVVASSQQVLTTM*
Ga0182030_1019084843300014838BogMGQEVSVSYQAVKSKVYKLIDAMVEDMKNQGDVQESMKRWWRLIHPADRPIARKYLLSVLQKSNATLEAITDGLVVFQEFEGRVDPITIKPQRAAASSQVLTTM*
Ga0182027_1186078613300014839FenMGQEVSVSYQAVKSKVYKLIDAMVEDMKNQGDVQESMKRWWKLIHPADRPIARKYLLSVLQKSNATLAAINDGLVVFQEFEGGMDPITIKPQRVVASSQQVLTTI*
Ga0167668_102741223300015193Glacier Forefield SoilMGQEVSVSYQAVKSKVYKLIDALVEDAKTRGDIQDSVTRWWKLVHPADRPVARKYLMMVLERSNASLEAISDGLLQFSECDPEASKMSKLQAVSPPQQTQVSPRM*
Ga0187819_1001163533300017943Freshwater SedimentMGQEVSVSYQAVKSKVYKLIDALVEDIKTEGDVQESMKRWWKLIHPADRPVARKYLLAVLQKSNASLEAITDGLVDFKEFERAREPETVKPPKLQRLASQAQAASPM
Ga0187817_1008623923300017955Freshwater SedimentLHLLDLGLATVLHVDVAESATHMGQEVSVSYQAVKSKVYKLIDALVEDIKTEGDVQESMKRWWKLIHPADRPVARKYLLAVLQKSNASLEAITDGLVDFKEFERAREPETVKPPKLQRLASQAQAASPM
Ga0187805_1020311823300018007Freshwater SedimentLHLLDLGLATVLHVDVAESATHMGQEVSVSYQAVKSKVYKLIDALVEDIKTEGDVQESMKRWWKLIHPADRPVARKYLLAVLQKSNASLEAITDGLVDFKEFERAR
Ga0187805_1025954323300018007Freshwater SedimentMGQEVSVSYQAVKSKVYKLMDAMVEDIKNQGDVQESMKRWWKLIHPADRPIARKYLLSVLQKSSATLNAISDGLEVFQEFEAVTHTVAIKPQ
Ga0184586_13230523300019194SoilMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFDAVRDLESVKTPKMQRSTGQAQVASPM
Ga0182025_105561813300019786PermafrostVAIRRAPILWDKEVSVSYQAVKSKVYKLIDAMVEDIKNQGDVQESMKRWWKLIHPADRPIARKYLLSVLQKSNATLEAITDGLGVFQEFENRIDPITIKPQRVSSSSQIATTM
Ga0193729_104073333300019887SoilMGQEVSVSYQAVKSKVYKLIDALVEDAKTEGDVQESMKRWWKLIHPADRPVARKYLLTVLAKSNASLEAITEGLVQFKDFEAIRDPDVEKLPKLPAITHHSQLSSGI
Ga0193728_108067013300019890SoilMGQEISVSYQAVKSKVYKLIDALVEDAKTEGDVQESVKRWWKLVHPADRPVARKYLLMVLARSNASLEAITDSLLQFKEFEAVTDADSEKLHKMPALASHAQLGSRI
Ga0193726_100143543300020021SoilMGQEISVSYQAVKSKVYKLIDALVEDAKTEGDVQESVKRWWKLVHPADRPVARKYLLMVLARSNASLEAITDSLLQFKEFEAVPDSDSEKLHKMPSLSSHAQVGTRV
Ga0193726_101136753300020021SoilMGQEISVSYQAVKSKVYKLIDALVEDAKTEGDVQESVKRWWKLVHPADRPVARKYLLMVLARSNASLEAITDSLLQFKEFEAVTDADSEKLHKIPALASHAQLGSRV
Ga0193726_108344323300020021SoilMGQEVSVSYQAVKSKVYKLIDALVEDAKTEGDVQESVKRWWKLVHPADRPVARKYLLMVLARSNASLEAITDSLLQFKEFEPATDSDSDKMHKVPALASHAQVGSRV
Ga0193726_111969713300020021SoilMGQEISVSYQAVKSKVYKLIDALVEDAKTEGDVQESVKRWWKLVHPADRPVARKYLLLVLARSNASLEAITDSLLQFKEFEAVTDTDSEKLHKMPALASHAQLGSRI
Ga0193726_113278113300020021SoilMGQEISVSYQAVKSKVYKLIDALVEDAKTEGDVQESVKRWWKLVHPADRPVARKYLLMVLARSNASLEAITDSLLQFKEFEAVSDPDSEKLHKMPTLASHAQLGSRI
Ga0193716_111083513300020061SoilSYQAVKSKVYKLIDALVEDAKTEGDVQESVKRWWKLVHPADRPVARKYLLMVLARSNASLEAITDSLLQFKEFEAVPDSDSEKLHKMPSLSSHAQVGTRV
Ga0210403_10003152133300020580SoilLANVLPQASGEQTMGQEVSISYQAVKSKVYKLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLEKSNASLEAISDGLLQFAEGQAEPQKLPKLHTSVADQAQVQNRI
Ga0210406_1086814523300021168SoilMGQEVSVSYQAVKSKVYKLIDALVEDAKTEGDVQESMKRWWKLIHPADRPVARKYLLSVLAKSNASLEAITEGLVQFKDFEAIRDPDVEKLPKLPAITHHSQLSSGI
Ga0210405_1032418113300021171SoilLASVLRYTTGEQTMGQEVSISYQAVKSKVYRLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLEKSNASLEAISDGLLQFAEGQPEPPKLSK
Ga0210388_1056495613300021181SoilEISVSYQAVKSKVYKLIDALVEDAKTEGDVQESVKRWWKLVHPADRPVARKYLLMVLARSNASLEAITDGLLQFKEFETVTDSDPEKLAKLPALASHAQVSSRV
Ga0210397_1022329353300021403SoilLASVLRYTTGEQTMGQEVSISYQAVKSKVYRLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLEKSNASLEAISDGLLQFAEGQPEPPKLSKVHTSVSDQAQVQSRI
Ga0210394_1015212823300021420SoilMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFEAVRDLESVKASKIQRPTSQAQVASM
Ga0210394_1130225413300021420SoilMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFDAVRDLETVKAPKMQRSTGQAQVASPM
Ga0210384_1158949113300021432SoilNMSQEVSISYQAVKSKVYKLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLEKSNASLEAISDGLLQFTEGQPEPAKLPELHTSVTDQAQVQSRI
Ga0242667_100552113300022513SoilMDAMVEDIKNQGDVQESMKRWWKLIHPADRPIARKYLLSVLQKSSATLDAISDGLEVFQEFETALNTVAIKPQRVHGTEQIASTM
Ga0212123_1007771533300022557Iron-Sulfur Acid SpringMGQEVSISYQAVKSKVYKLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLEKSNASLEAISDGLLQFAEGQPEPQKLSKLHTSVTDQAQVQSRI
Ga0212123_1091560413300022557Iron-Sulfur Acid SpringMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFDAVRDLESVKASKIQRSTSQAQVASM
Ga0247553_10591223300023672SoilATHMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFDAVRDLESVKTPKMQRSTGQAQVASPM
Ga0179589_1022508513300024288Vadose Zone SoilMGQEVSVSMQAVKSRVYKLIDALVEGAKTEGEIQESMRRWWKLVHPADRPMAQKYLQMVLEKSNASLGAINHGLLTFKEFAEQEAATVKAPKLPPVPQQRAAAAPSPRLN
Ga0209171_1049656413300025320Iron-Sulfur Acid SpringMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESVKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITVGLVGFKEFEAVRDLESVKASKMQRPTSQAQVASM
Ga0207929_101317323300025505Arctic Peat SoilMGQEVSVSYQAVKSKVYKLIDALVEDAKTRGDVQDSVKRWWKLVHPVDRPVARKYLLMVLEKSNASLEAISDGLLQFTEGETEPAKLAKLHAMPEQTQISSRI
Ga0208849_1000420343300025664Arctic Peat SoilMGQEVSVSYQAVKSKVYKLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLERSNASLEAISDGLLEFTTSETEPAKLAKLHTVSPQTQIGTRI
Ga0208849_106609213300025664Arctic Peat SoilKLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLERSNASLEAISDGLLQFAEGQPEPAKLPKLHSVPEQSQASSRM
Ga0209838_102858123300026214SoilMPRWGNLAMGQEISVSYQAVKSKVYKLIDALVEDAKTEGDVQESVKRWWKLVHPADRPVARKYLLMVLARSNASLEAITDSLLQFKEFEAMSDSDSDKLHKIPTLASHAQVGSRI
Ga0209839_1010451423300026294SoilEVSVSYQAVKSKVYKLIDALVEDIKTEGDVQESMKRWWKLVHPADRPVARKYLLAVLQKSNASLEAITDGLVDFKEFEKVRQPEPIKPPKMQRLASQAHVASPM
Ga0209839_1016836523300026294SoilMGQEVSVSYQAVKSKVYKLIDALVEDAKTTGDVQDSVKRWWKLVHPADRPVARKYLMMVLEKSNASLEAISDGFSQFMEGETEPAKLSKLHPVPEQTQISSRI
Ga0209219_100229243300027565Forest SoilLASVLPQATGEQNMGQEVSISYQAVKSKVYKLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVAKKYLMMVLEKSNASLEAISDGLLQFAEGQPEPAKLPKLHTSVTDQAQVQSRI
Ga0209908_1000376723300027745Thawing PermafrostMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFDTVRDLESVKASKMQRSTSQAQVASTM
Ga0209656_1025300523300027812Bog Forest SoilMGQEVSVSYQAVKSKVYKLIDALVEDMKTEGDVQESMKRWWKLVHPADRPVARKYLLMVLAKSNASLEAITDGVLSFKEFDAADVGVVKAPKIQRAVSQAQMAGPM
Ga0209517_1045439013300027854Peatlands SoilMGQEVSVSYQAVKSKVYKLIDALVEDIKTEGDVQESMKRWWKLIHPADRPVARKYLLAVLQKSNASLEAITDGLVDFKEFERTREPETVKPPKLQRLASQAQAVSPM
Ga0209624_1072299413300027895Forest SoilMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFDAVRDLESVKTPKMQRSTGQAQAASPM
Ga0209415_10005244133300027905Peatlands SoilMGQEVSISYQAVKSKVYKLIDALVEDMKTEGDVQESMKRWWKLVHPADRPVARKYLLMVLQKSNASLEAITDGLVAFKEFEEVRELDSAKAPKMQRVGSQAQVASPM
Ga0189898_102529223300028450Peatlands SoilPHMGQEVSISYQAVKSKVYKLIDALVEDMKTEGDVQESMKRWWKLVHPADRPVARKYLLMVLQKSNASLEAITDGLVAFKEFEEVRELDSAKAPKMQRVGSQAQVASPM
Ga0189898_103941323300028450Peatlands SoilATHMGQEVSVSYQAVKSKVYKLIDALVEDIKTEGDVQESMKRWWKLIHPADRPVARKYLLAVLQKSNASLEAITDGLVDFKEFERTREPETVKPPKLQRLASQAQAVSPM
Ga0310038_1018402513300030707Peatlands SoilLATVLHVDLPESATHMGQEVSVSYQAVKSKVYKLIDALVEDIKTEGDVQESMKRWWKLIHPADRPVARKYLLAVLQKSNASLEAITDGLVDFKEFERTREPETVKPPKLQRLASQAQAVSPM
Ga0075394_1192221123300030969SoilMAQEVSISYQAVKSKVYKLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLEKSNASLEAISDGLLQFTEGQPEPGKLPKLHTSVTDQAQVQNRI
Ga0073994_1215933013300030991SoilMGQEVSVSYQAVKSKVYKLIDALVEDAKTEGDIQESMKRWWKLIHPADRPVARKYLLTVLAKSNATLEAISEGLVQFKDFETIREPYVEKLSKPPITASQSQLSSGM
Ga0170824_11560901613300031231Forest SoilMGQEVSVSYQAVKSKVYKLIDALVEDAKTEGDVQESMKRWWKLIHPADRPVARKYLLTVLAKSNASLEAITEGLVQFKDFETIRDSDVEKLPKLPALTHHSQLSSGI
Ga0302324_10099122923300031236PalsaMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFEAVRELDSVKASKMQRSTSQAQVASPM
Ga0310686_11042953323300031708SoilMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFDAVRDLESVKTQKMQRSTGQAQVASPM
Ga0307474_1108104913300031718Hardwood Forest SoilLASVLPHTSGEQTMGQEVSISYQAVKSKVYRLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLEKSNASLEAISDGLLQFAEGQPEPQKLSKLHTSVADQAQVQSRI
Ga0307477_100000053623300031753Hardwood Forest SoilMGQEVSISYQAVKSKVYRLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLEKSNASLEAISDGLLQFAEGQPEPQKLSKLHTSVADQAQVQSRI
Ga0307477_1039449113300031753Hardwood Forest SoilVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLEKSNASLEAISDGLLQFAEGQPEPQKLSKLHTSVADQAQVQSRI
Ga0307478_1058769223300031823Hardwood Forest SoilPQAIGEQNMSQEVSISYQAVKSKVYKLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLEKSNASLEAISDGLLQFAEGQPEAAKLPELHTSVTDQAQVQNRI
Ga0307479_1070804713300031962Hardwood Forest SoilQEVSISYQAVKSKVYRLIDALVEDAKTRGDVQDSVKRWWKLVHPADRPVARKYLMMVLEKSNASLEAISDGLLQFAEGQPEPQKLSKLHTSVADQAQVQSRI
Ga0316051_101806023300032119SoilGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFDAVRDLESVKTPKMQRSTGQAQVASPM
Ga0316053_11210423300032120SoilGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFDAVRDLESVKTQKMQRSTGQAQVASPM
Ga0311301_10027157103300032160Peatlands SoilMGQEVSISYQAVKSKVYKLIDALVEDMKTEGDVQESMKRWWKLVHPADRPVARKYLLMVLQKSNASLEAITDGLVAFKEFEEVRELDSSKAPKMQRVGGQTQAASPM
Ga0311301_1255618013300032160Peatlands SoilMGQEVSVSYQAVKSKVYKLIDAMVEDMKNQGDVQESMKRWWKLIHPADRPIARKYLLSVLQKSNATLAAINDGLVVFQEFEGGIDPITIKPQRVAASSQQVLTTM
Ga0348332_1445082613300032515Plant LitterSATHMGQEVSVSYQAVKSKVYKLIDALVEDIKSEGDVQESMKRWWKLVHPADRPVARKYLLEVLQKSNASLEAITDGLVGFKEFDAVRDLESVKTQKMQRSTGQAQVASPM
Ga0335085_1003279053300032770SoilMGQEVSVSYQAVKTKVYRLIDALVEGAKTEDEVQESMRRWWKLIHPADRAVAQKYILTVLAKSNASLGAISDGLFGFKEFAANREPEPPMKEAKLPRTNNQAQAASTM
Ga0335085_1003410923300032770SoilMGQEVSVSYQAVKSKVYKLMDAMVEDIKNQGDVQESMKRWWKLIHPADRPIARKYLLSVLQKSSATLDAISDGLEVFQEFETVVNTAPIRPQRVPGPEQILTTM
Ga0335085_1015012723300032770SoilMGQEVSVSYQAVKTKVYRLIDALVEGAKTEDEVQESMRRWWKLIHPADRAVAQKYILTVLAKSNASLGAISDGLFGFKEFAANRELEPSIKETKLPRTANQAQAASTM
Ga0335079_1001109943300032783SoilMGQEVSVSYQAVKTKVYRLIDALVEGAKTEDDVRESMRRWWKLIHPADRAVAQKYILTVLAKSNASLGAISDGLFGIKEFAATREPEVPIKSAKIPRTSTQAQAASTM
Ga0335079_1028806123300032783SoilMGQEISVSYQAVKSKVYRLIDALVEGSKTEGEVQESMQRWWKLIHPADRAVAQKYILTVLAKSNASLEAMNDGLFAFKEFAGVREMEVAKAAKLQARAASPSQLAGPM
Ga0335078_1000522613300032805SoilVYRLIDALVEGSKTEGEVQESMQRWWKLIHPADRAVAQKYILTVLAKSNASLEAMNDGLFAFKEFAGVREMEVAKAAKLQARAASPSQLAGPM
Ga0335078_1067011323300032805SoilMGQEVSVSYQAVKTKVYRLIDALVEGAKTEDDVRESMRRWWKLIHPADRAVAQKYILTVLAKSNASLGAISDGLFGIKEFAATREPEVPIKSAKIPRTSTQAQ
Ga0335080_1003520633300032828SoilMGQEVSVSYQAVKSKVYKLIDALVEDMKTEGDVQESMKRWWKLVHPADRPVARKYLLMVLAKSNASLEAITDGVLSFKEFDAADLEVVKTPKIQRPIPHTQMVGPM
Ga0370515_0001391_979_13143300034163Untreated Peat SoilMGQEVSVSYQAVKSKVYKLIDALVEDAKTEGDVQESMKRWWKLIHPADRPVARKYLLTVLAKSNASLEAITEGLVQFKDFETIRASDVEKLAKLPAITHQSQLSSGISHSS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.