Metagenome / Metatranscriptome Family F082978

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082978
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	46 residues
Representative Sequence	FVKYTLSPAGLAQYKAGGFTLIPPTVTGSASSVPAAISSELGG
Number of Associated Samples	92
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.12 %
% of genes from short scaffolds (< 2000 bps)	89.38 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.602 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (13.274 % of family members)
Environment Ontology (ENVO)	Unclassified (29.204 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.177 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.72% β-sheet: 2.82% Coil/Unstructured: 77.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00528	BPD_transp_1	33.63
PF00005	ABC_tran	9.73
PF01381	HTH_3	0.88
PF07690	MFS_1	0.88
PF03061	4HBT	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.60 %
Unclassified	root	N/A	35.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.60 %
Unclassified	root	N/A	35.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.60 %
Unclassified	root	N/A	35.40 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	51.33 %
Unclassified	root	N/A	35.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.40 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12.39 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.40 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.77 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.88 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.40 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.88 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.88 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.40 %
Alicyclobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae	0.88 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.88 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.40 %
Ferrimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrimicrobium	0.88 %
Alicyclobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus	0.88 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.40 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	0.88 %
Alicyclobacillus contaminans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus → Alicyclobacillus contaminans	0.88 %
Ferrimicrobium acidiphilum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrimicrobium → Ferrimicrobium acidiphilum	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.40 %
Mycobacterium sp. SM1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. SM1	0.88 %
Alicyclobacillus contaminans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus → Alicyclobacillus contaminans	0.88 %
Ferrimicrobium acidiphilum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrimicrobium → Ferrimicrobium acidiphilum	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003368\|JGI26340J50214_10062713	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300003368\|JGI26340J50214_10062727	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300005537\|Ga0070730_10207875	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300005602\|Ga0070762_10256740	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300005610\|Ga0070763_10658580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus → Alicyclobacillus contaminans	611	Open in IMG/M
3300005712\|Ga0070764_10859030	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300005952\|Ga0080026_10040946	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300005995\|Ga0066790_10338677	All Organisms → cellular organisms → Bacteria → Terrabacteria group	642	Open in IMG/M
3300006176\|Ga0070765_100632693	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300006893\|Ga0073928_11134190	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300009672\|Ga0116215_1296684	All Organisms → cellular organisms → Bacteria → Terrabacteria group	703	Open in IMG/M
3300009698\|Ga0116216_10064364	All Organisms → cellular organisms → Bacteria	2256	Open in IMG/M
3300009698\|Ga0116216_10255629	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1070	Open in IMG/M
3300009698\|Ga0116216_10806445	Not Available	563	Open in IMG/M
3300010048\|Ga0126373_12703959	Not Available	554	Open in IMG/M
3300010343\|Ga0074044_10469200	All Organisms → cellular organisms → Bacteria → Terrabacteria group	823	Open in IMG/M
3300010343\|Ga0074044_11015047	Not Available	544	Open in IMG/M
3300010360\|Ga0126372_12017452	Not Available	624	Open in IMG/M
3300010376\|Ga0126381_105138483	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300010379\|Ga0136449_100641022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1799	Open in IMG/M
3300010379\|Ga0136449_103147275	Not Available	639	Open in IMG/M
3300010379\|Ga0136449_104205381	Not Available	534	Open in IMG/M
3300010867\|Ga0126347_1461046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Ferrimicrobium → Ferrimicrobium acidiphilum	1924	Open in IMG/M
3300010876\|Ga0126361_10828537	Not Available	511	Open in IMG/M
3300012361\|Ga0137360_11354540	Not Available	614	Open in IMG/M
3300014493\|Ga0182016_10796117	Not Available	526	Open in IMG/M
3300014501\|Ga0182024_12611568	All Organisms → cellular organisms → Bacteria → Terrabacteria group	542	Open in IMG/M
3300015206\|Ga0167644_1096226	All Organisms → cellular organisms → Bacteria → Terrabacteria group	892	Open in IMG/M
3300017822\|Ga0187802_10254990	Not Available	679	Open in IMG/M
3300017924\|Ga0187820_1192889	Not Available	632	Open in IMG/M
3300017928\|Ga0187806_1015848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. SM1	2144	Open in IMG/M
3300017928\|Ga0187806_1031561	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300017928\|Ga0187806_1147599	All Organisms → cellular organisms → Bacteria → Terrabacteria group	774	Open in IMG/M
3300017928\|Ga0187806_1277930	Not Available	585	Open in IMG/M
3300017932\|Ga0187814_10283761	Not Available	631	Open in IMG/M
3300017932\|Ga0187814_10330486	All Organisms → cellular organisms → Bacteria → Terrabacteria group	587	Open in IMG/M
3300017937\|Ga0187809_10371858	Not Available	540	Open in IMG/M
3300017942\|Ga0187808_10370578	All Organisms → cellular organisms → Bacteria → Terrabacteria group	652	Open in IMG/M
3300017943\|Ga0187819_10403908	All Organisms → cellular organisms → Bacteria → Terrabacteria group	785	Open in IMG/M
3300017955\|Ga0187817_10262779	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1099	Open in IMG/M
3300017961\|Ga0187778_11055229	Not Available	564	Open in IMG/M
3300017972\|Ga0187781_11112075	Not Available	580	Open in IMG/M
3300018001\|Ga0187815_10168702	All Organisms → cellular organisms → Bacteria → Terrabacteria group	926	Open in IMG/M
3300018006\|Ga0187804_10161036	All Organisms → cellular organisms → Bacteria → Terrabacteria group	948	Open in IMG/M
3300018007\|Ga0187805_10227479	All Organisms → cellular organisms → Bacteria → Terrabacteria group	854	Open in IMG/M
3300018033\|Ga0187867_10080932	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300018033\|Ga0187867_10125355	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300018037\|Ga0187883_10164562	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1140	Open in IMG/M
3300018040\|Ga0187862_10098390	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300018044\|Ga0187890_10200108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1132	Open in IMG/M
3300018058\|Ga0187766_10324927	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1002	Open in IMG/M
3300018058\|Ga0187766_11180660	Not Available	553	Open in IMG/M
3300018060\|Ga0187765_10471674	All Organisms → cellular organisms → Bacteria → Terrabacteria group	789	Open in IMG/M
3300018085\|Ga0187772_10160650	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300018085\|Ga0187772_10745313	All Organisms → cellular organisms → Bacteria → Terrabacteria group	704	Open in IMG/M
3300018085\|Ga0187772_11342235	Not Available	530	Open in IMG/M
3300018086\|Ga0187769_11278305	Not Available	555	Open in IMG/M
3300019887\|Ga0193729_1122225	All Organisms → cellular organisms → Bacteria → Terrabacteria group	969	Open in IMG/M
3300021181\|Ga0210388_11233412	Not Available	633	Open in IMG/M
3300021401\|Ga0210393_10122308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2081	Open in IMG/M
3300021403\|Ga0210397_11400777	All Organisms → cellular organisms → Bacteria → Terrabacteria group	543	Open in IMG/M
3300021404\|Ga0210389_10657083	All Organisms → cellular organisms → Bacteria → Terrabacteria group	822	Open in IMG/M
3300021405\|Ga0210387_10573146	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1003	Open in IMG/M
3300021407\|Ga0210383_11158119	All Organisms → cellular organisms → Bacteria → Terrabacteria group	651	Open in IMG/M
3300021420\|Ga0210394_10577067	All Organisms → cellular organisms → Bacteria → Terrabacteria group	989	Open in IMG/M
3300021433\|Ga0210391_11237935	Not Available	577	Open in IMG/M
3300021474\|Ga0210390_11207530	Not Available	610	Open in IMG/M
3300024176\|Ga0224565_1046276	Not Available	510	Open in IMG/M
3300027504\|Ga0209114_1035850	All Organisms → cellular organisms → Bacteria → Terrabacteria group	847	Open in IMG/M
3300027517\|Ga0209113_1039942	Not Available	670	Open in IMG/M
3300027817\|Ga0209112_10178226	All Organisms → cellular organisms → Bacteria → Terrabacteria group	723	Open in IMG/M
3300027817\|Ga0209112_10227631	Not Available	647	Open in IMG/M
3300027824\|Ga0209040_10224616	All Organisms → cellular organisms → Bacteria → Terrabacteria group	958	Open in IMG/M
3300027824\|Ga0209040_10224650	All Organisms → cellular organisms → Bacteria → Terrabacteria group	958	Open in IMG/M
3300027829\|Ga0209773_10254717	All Organisms → cellular organisms → Bacteria → Terrabacteria group	733	Open in IMG/M
3300027855\|Ga0209693_10160326	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1110	Open in IMG/M
3300027895\|Ga0209624_10678433	All Organisms → cellular organisms → Bacteria → Terrabacteria group	681	Open in IMG/M
3300027908\|Ga0209006_10468307	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1054	Open in IMG/M
3300028742\|Ga0302220_10375238	Not Available	512	Open in IMG/M
3300028765\|Ga0302198_10523158	Not Available	528	Open in IMG/M
3300028879\|Ga0302229_10400207	Not Available	611	Open in IMG/M
3300028879\|Ga0302229_10549344	Not Available	509	Open in IMG/M
3300028906\|Ga0308309_10637004	All Organisms → cellular organisms → Bacteria → Terrabacteria group	926	Open in IMG/M
3300029910\|Ga0311369_11226232	Not Available	578	Open in IMG/M
3300029951\|Ga0311371_10326484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2142	Open in IMG/M
3300029951\|Ga0311371_11165608	All Organisms → cellular organisms → Bacteria → Terrabacteria group	895	Open in IMG/M
3300029951\|Ga0311371_12013018	Not Available	612	Open in IMG/M
3300030056\|Ga0302181_10470296	Not Available	533	Open in IMG/M
3300030399\|Ga0311353_11468701	Not Available	553	Open in IMG/M
3300030503\|Ga0311370_12028940	Not Available	573	Open in IMG/M
3300030524\|Ga0311357_10982125	All Organisms → cellular organisms → Bacteria → Terrabacteria group	744	Open in IMG/M
3300030575\|Ga0210288_1228473	Not Available	535	Open in IMG/M
3300030617\|Ga0311356_10069539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3727	Open in IMG/M
3300030730\|Ga0307482_1069172	All Organisms → cellular organisms → Bacteria → Terrabacteria group	905	Open in IMG/M
3300030739\|Ga0302311_10781459	Not Available	623	Open in IMG/M
3300030740\|Ga0265460_12991222	Not Available	508	Open in IMG/M
3300030815\|Ga0265746_1027937	All Organisms → cellular organisms → Bacteria → Terrabacteria group	715	Open in IMG/M
3300031234\|Ga0302325_10072468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6652	Open in IMG/M
3300031525\|Ga0302326_11993733	All Organisms → cellular organisms → Bacteria → Terrabacteria group	750	Open in IMG/M
3300031708\|Ga0310686_119783193	All Organisms → cellular organisms → Bacteria → Terrabacteria group	819	Open in IMG/M
3300031715\|Ga0307476_10224402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1368	Open in IMG/M
3300031879\|Ga0306919_11340268	All Organisms → cellular organisms → Bacteria → Terrabacteria group	541	Open in IMG/M
3300031912\|Ga0306921_11996291	All Organisms → cellular organisms → Bacteria → Terrabacteria group	618	Open in IMG/M
3300032059\|Ga0318533_11304090	Not Available	531	Open in IMG/M
3300032089\|Ga0318525_10636975	Not Available	543	Open in IMG/M
3300032160\|Ga0311301_10052643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9236	Open in IMG/M
3300032896\|Ga0335075_10137829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3081	Open in IMG/M
3300032896\|Ga0335075_10515404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1216	Open in IMG/M
3300032898\|Ga0335072_10190160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2450	Open in IMG/M
3300032898\|Ga0335072_11182659	All Organisms → cellular organisms → Bacteria → Terrabacteria group	681	Open in IMG/M
3300033158\|Ga0335077_10054869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4830	Open in IMG/M
3300034199\|Ga0370514_071845	All Organisms → cellular organisms → Bacteria → Terrabacteria group	876	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.99%
Aquatic	Environmental → Aquatic	23.01%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.95%
Freshwater	Environmental → Aquatic → Freshwater	22.12%
Peat	Environmental → Terrestrial → Peat	14.16%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.16%
Loam	Environmental → Terrestrial → Soil → Loam	10.62%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.16%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	13.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.54%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	13.27%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.31%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.42%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.77%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.77%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.77%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.89%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.89%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.89%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.89%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300024176	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1	Environmental	Open in IMG/M
3300027504	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027517	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030575	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE050SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26340J50214_100627132	3300003368	Bog Forest Soil	KPTDAGVAFVKYTLSPAGLALYKAGGFTVLTPTVTGSTSSVPAAISSELGG*
JGI26340J50214_100627272	3300003368	Bog Forest Soil	KPTDAGVAFVKYTLSPAGLALYKAGGFTVLTPTIIGSTSSVPAAISSELGG*
Ga0070730_102078753	3300005537	Surface Soil	ISFVQYTLSRAGLAQYKAGGFTLLTPTVTGSASSVPSAISSELGG*
Ga0070762_102567401	3300005602	Soil	YTLSPAGLAQYKAGGFKLITPTVVGDKSAVPSAVLSELGS*
Ga0070763_106585802	3300005610	Soil	TSPGNAFIKYTLSPAGLAQYKQGGFTVLTPTVFGDKSAVPAAIQSELGS*
Ga0070764_108590302	3300005712	Soil	IAFVKYTLSAAGLAEYKAGGFTLVPPKVTGSASAVPAAISSELGG*
Ga0080026_100409461	3300005952	Permafrost Soil	AAIAFVKYTLSPAGLAQYKAGGFTLIPTAVTGSASSVPSAISSELGG*
Ga0066790_103386772	3300005995	Soil	TPAAIAFVKYTLSQAGLAQYKTGGFTLLKPTITGTGVPAAISSELGG*
Ga0070765_1006326932	3300006176	Soil	PTPAAIAFVKYTLSAAGLAQYKAGGFTLPTPTITGSASSVPTEISSELGG*
Ga0073928_111341902	3300006893	Iron-Sulfur Acid Spring	AFVKYTLSPAGLAQYKQGGFTVLTPAVTGSTSSVPSAISSELGG*
Ga0116215_12966842	3300009672	Peatlands Soil	AGLALYKAGGFTVLTPTITGSTSSVPSAISSELGG*
Ga0116216_100643644	3300009698	Peatlands Soil	FVKYTLSPAGLAQYKQGGFSLPTPTVFGTASAVPSEISSELGG*
Ga0116216_102556292	3300009698	Peatlands Soil	FVKYTLSPAGLAQYKQGGFSLPTPTVFGTASAVPAEITSELGG*
Ga0116216_108064452	3300009698	Peatlands Soil	GKPTDAGVAFVKYTLSPAGLALYKAGGFTVLTPTITGSTSSVPSAISSELGG*
Ga0126373_127039591	3300010048	Tropical Forest Soil	TAFVKFTLSPAGLALYKAGGYALIKPTVSGTTSAVPAAISSELG*
Ga0074044_104692001	3300010343	Bog Forest Soil	AFVKYTLSPAGLALYKQGGFKVLTPTVFGTTSAVPSAISSELGS*
Ga0074044_110150472	3300010343	Bog Forest Soil	VAFVKYTLSPAGLALYKAGGFTVLTPTIIGSTSSVPAAISSELGG*
Ga0126372_120174522	3300010360	Tropical Forest Soil	SQAALAFVKYTLSKAGLTLYKAGGFSLPPLTATGTTTAIPAAISSELGT*
Ga0126381_1051384832	3300010376	Tropical Forest Soil	PSSAREAYVKYVLSPAGLALYKKGGYTVLKPTAFGTSSAIPSSIRSELG*
Ga0136449_1006410221	3300010379	Peatlands Soil	TDAGVAFVKYTLSPAGLALYKAGGFTVLTPTITGSTSSVPAAISSELGG*
Ga0136449_1031472752	3300010379	Peatlands Soil	IAFVKYTLSAAGLAQYKQGGFTLPTPTIVGSTSAVPAEISSELGG*
Ga0136449_1042053812	3300010379	Peatlands Soil	IGKPTDAGVAFVKYTLSPAGLALYKAGGFTVLTPTLTGSTSSVPAAISSELGG*
Ga0126347_14610461	3300010867	Boreal Forest Soil	IIGKPTPAAIAFVKYTLSPAGLAQYKTGGFTLLTPAVTGSSSAVPAAISSELGG*
Ga0126361_108285372	3300010876	Boreal Forest Soil	IGTPTPAAIAFVKYTLSAAGLAQYKAGGFTLPTPTIVGTASSVPTEISSELGG*
Ga0137360_113545402	3300012361	Vadose Zone Soil	PTPAAIAFVKYVLSPAGLAVYKQGGYTLLKPTLTGSGAPSAVTGELGG*
Ga0182016_107961172	3300014493	Bog	TPAGIAFIKYTLSAAGLAEYKAGGFSLITPKVVGDASAVPADIASELGS*
Ga0182024_126115681	3300014501	Permafrost	KYTLSPAGLAQYKQGGFTLITPTVTGDSSAVPSAVTSELGG*
Ga0167644_10962261	3300015206	Glacier Forefield Soil	GTPTPAGNAFIAYTLSPAGLAQYKAGGFKLITPTVVGDKSAVPSAVLSELGS*
Ga0187802_102549902	3300017822	Freshwater Sediment	FVKYTLSPAGLAQYKQGGFSLPTPTVFGTASAVPSEISSELGG
Ga0187820_11928892	3300017924	Freshwater Sediment	SPAGLALYKQGGFTVLTPTVTGDASAVPSAISSELGT
Ga0187806_10158481	3300017928	Freshwater Sediment	PAGLAQYKQGGFSLPTPTVFGTASAVPAEISSELGG
Ga0187806_10315611	3300017928	Freshwater Sediment	IIGTPTPAGIAFVKYTLSPAGLALYKQGGFSLPPPTVFGTASAVPSEISSELGG
Ga0187806_11475991	3300017928	Freshwater Sediment	PTDPGIAFDKYTLSPAGLNLYKQGGFTVLTPTVTGNASAVPSAISSELGT
Ga0187806_12779301	3300017928	Freshwater Sediment	TPAGEAFVAYTLSQEGLAQYKAGGFSMITPTVVGDKSAVPAAILSELGS
Ga0187814_102837611	3300017932	Freshwater Sediment	TIGKPSNAGTAFVKYTLSPAGLAQYKAGGFTLIKPTAFGTTGAIPSAISSELG
Ga0187814_103304862	3300017932	Freshwater Sediment	LSSTGLAQYKQGGFTVLTPTLFGSKSDVPASIASELGT
Ga0187809_103718582	3300017937	Freshwater Sediment	IAFVKYTLSAAGLAQYKQGGFTLPTPTIVGSASAVPSEISSELGG
Ga0187808_103705782	3300017942	Freshwater Sediment	MDITTIGKADPAAIEFVKYTLSKAGQAQYKQGGFTLLTPTGYGTGIPAAIQSELGS
Ga0187819_104039082	3300017943	Freshwater Sediment	TPAGIAFVKYALSPAGLALYKQGGFSLPPPTVFGTASAVPSEISSELGG
Ga0187817_102627793	3300017955	Freshwater Sediment	VKYTLSPAGLALYKQGGFSLPPPTVFGTASAVPAEISSELGG
Ga0187778_110552291	3300017961	Tropical Peatland	PAGLTLYKQGGFTVLTPTVTGDMSAVPSAISSELGS
Ga0187781_111120751	3300017972	Tropical Peatland	PTPAGISFVKYTLSPTGLAQYKAGGFSLPTPTVFGSAGSVPSEISSELGT
Ga0187815_101687022	3300018001	Freshwater Sediment	GIAFVKYTLSPAGLAQYKQGGFSLPTPTVFGTASAVPAEISSELGG
Ga0187804_101610362	3300018006	Freshwater Sediment	AEAFVAYTLSPAGVAQYKAGGFTILKPQLFGSMSDVPAPIASELGS
Ga0187805_102274791	3300018007	Freshwater Sediment	PAAIAFVKYTLSAAGLAQYKQGGFTLPTPTIVGSASAVPSEISSELGG
Ga0187867_100809321	3300018033	Peatland	GTPTPAGIAFVKYTLSPTGLAQYKAGGFTVLTPTVFGDSSAVPVAIKSELGG
Ga0187867_101253553	3300018033	Peatland	GTPTPAGIAFVKYTLSPTGLAQYKAGGFTVLTPTVFGDSSAVPAAIKSELGG
Ga0187883_101645622	3300018037	Peatland	AGLAQYKQGGFTLITPTVTGDASAVPSAVKSELGG
Ga0187862_100983901	3300018040	Peatland	TTIGTPTAAGTAFIKYTLSSAGLAQYKQGGFTLITPTVFGDSSAVPAAIKSELGG
Ga0187890_102001081	3300018044	Peatland	TLSPAGLAQYKAGGFKLITPTVVGDKSAVPADILSELGS
Ga0187766_103249272	3300018058	Tropical Peatland	FVKYTLSAAGLAQYKQGGFTLPTPTIVGSASAVPSQISSELGS
Ga0187766_111806601	3300018058	Tropical Peatland	AGVAQYKAGGFMILTPTLFGPKSAVPSAVASELGG
Ga0187765_104716742	3300018060	Tropical Peatland	IAFVKYTLSSAGLAQYKTGGFTLITPTVVGDSSAVPAAVRSELGG
Ga0187772_101606503	3300018085	Tropical Peatland	AFVKYTLSPAGLTLYKQGGFTVLTPTVTGDASAVPSAISSELGS
Ga0187772_107453131	3300018085	Tropical Peatland	GISFVKYTLSPTGLAQYKAGGFSLPTPTVFGSAGSVPSEISSELGT
Ga0187772_113422352	3300018085	Tropical Peatland	SPAGLAQYKAGGFTVLTPTVIGTASAVPAAISSELGT
Ga0187769_112783052	3300018086	Tropical Peatland	FTLSPAGMAIYKAGGFTVLTPTLFGTKSDVPSAVASELGG
Ga0193729_11222252	3300019887	Soil	SAGLAQYKQGGFTLVTPTVTGDSSAVPSAVKSELGG
Ga0210388_112334121	3300021181	Soil	FIAYTLSPAGLAQYKAGGFTLLTPTVVGDKTAVPAAVASELPSS
Ga0210393_101223081	3300021401	Soil	TLSAAGLAQYKAGGFTLPTPTITGSASSVPTEISSELGG
Ga0210397_114007772	3300021403	Soil	AGTAFVKYTLSPAGLAQYKQGGFTLITPTVTGDASAVPSAVTSELGG
Ga0210389_106570831	3300021404	Soil	PTPAAIAFVKYTLSQAGLAQYKTGGFTLLAPAASGTTSAIPTAISSELGG
Ga0210387_105731461	3300021405	Soil	KYTLYPAGLAQYKQGGFTLITPTVTGDASAVPSAVTSELGG
Ga0210383_111581191	3300021407	Soil	VKYTLSPAGLAQYKQGGFTLITPTVTGDASAVPSAVTSELGG
Ga0210394_105770671	3300021420	Soil	TAFVKYTLSPAGLALYKQGGFKVLTPTVFGTASTVPSAISSELGS
Ga0210391_112379351	3300021433	Soil	KPTPAAIAFVKYTLSPAGLALYKTGGFRLATPVVTGDSSAIPAAIKSELGS
Ga0210390_112075302	3300021474	Soil	YTLSPAGLAQYKQGGFTVLTPTLFGSKSDVPASVASELGS
Ga0224565_10462761	3300024176	Plant Litter	TAFVKYTLSPAGLAQYKQGGFKVLTPTVFGTASSVPSAISSELGS
Ga0209114_10358502	3300027504	Forest Soil	LSPAGLAQYKKGGFTLITPTVFGDKSAVPAAIQSELGS
Ga0209113_10399421	3300027517	Forest Soil	TAFIKYTLSPAGLAQYKQGGFTVLTPTVFGDKTAVPAAIQSELGS
Ga0209112_101782261	3300027817	Forest Soil	PPAAIAFVKYTLSPAGLAEYKTGGFSLPKVTVFGTASAVPSAISSELGS
Ga0209112_102276312	3300027817	Forest Soil	ITSIGTPTAAGTAFIKYTLSPAGLAQYKKGGFTLITPTVFGDKSAVPAAIQSELGS
Ga0209040_102246161	3300027824	Bog Forest Soil	KPTDAGVAFVKYTLSPAGLALYKAGGFTVLTPTVTGSTSSVPAAISSELGG
Ga0209040_102246502	3300027824	Bog Forest Soil	KPTDAGVAFVKYTLSPAGLALYKAGGFTVLTPTIIGSTSSVPAAISSELGG
Ga0209773_102547171	3300027829	Bog Forest Soil	AKYTLSPTGLALYKAGGFTLFPLTVTGDASAIPAAVKSELGG
Ga0209693_101603261	3300027855	Soil	PTPAGTAFIQYTLSPTGLAQYKAGGFTLITPTVVGDKSAVPSAVLSELGS
Ga0209624_106784331	3300027895	Forest Soil	SPTGLAQYKAGGFKLITPTVVGDKSAVPAAVLSELGS
Ga0209006_104683072	3300027908	Forest Soil	TAFVKYTLSPAGLTLYKTGGFTVLTPTVVGDKSAVPAAITSELGT
Ga0302220_103752382	3300028742	Palsa	TAIGTPTPAAIAFIKYTLSPAGLAQYKAGGFKLITPTVVGDKSAVPADILSELGS
Ga0302198_105231582	3300028765	Bog	PTPAGIAFVKYTLSPTGLAQYKAGGFTVLTPTVFGDSSAVPVAIKSELGG
Ga0302229_104002071	3300028879	Palsa	TIGTPTPAGIAFIKYTLSPTGLAQYKAGGFKLITPTVVGDKSAVPADILSELGS
Ga0302229_105493441	3300028879	Palsa	AFVKYTLSAAGLAQYKAGGFTLITPTVVGTGAPSAITSELGS
Ga0308309_106370041	3300028906	Soil	AAIAFVKYTLSPAGLALYKTGGFTVLTPTVVGDKSAVPAAITSELGT
Ga0311369_112262321	3300029910	Palsa	LSPTGLAQYKAGGFKLITPTVVGDKTAVPADILSELGS
Ga0311371_103264843	3300029951	Palsa	TIGTPTPAAIAFIKYTLSPAGLAQYKAGGFKLITPTVVGDKSAVPADILSELGS
Ga0311371_111656082	3300029951	Palsa	GKPTPAAIAFVKYTLSKAGLAEYKAGGFALFTPAATGTGVPAGVQSELGG
Ga0311371_120130182	3300029951	Palsa	GIAFIKYTLSPTGLAQYKAGGFKLITPTVVGDKTAVPADILSELGS
Ga0302181_104702961	3300030056	Palsa	IIGKPTPAAIAFVKYTLSKAGLAEYKAGGFALFTPAATGTGVPAGVQSELGG
Ga0311353_114687011	3300030399	Palsa	ITTIGKPTSAAIAFIKYTLSSTGMAQYKQGGFALLKPTLYGPASAVPAAIRSELGS
Ga0311370_120289402	3300030503	Palsa	IKYTLSPAGLAQYKAGGFKLITPTVVGDKSAVPADILSELGS
Ga0311357_109821251	3300030524	Palsa	SPAGLAQYKAGGFTLIPPTVTGSASSVPAAISSELGG
Ga0210288_12284732	3300030575	Soil	QIGTPTPAGTAFIAYTLSPAGLAQYKAGGFKLITPTVVGDKSSVPSAILSELGS
Ga0311356_100695391	3300030617	Palsa	FIAYTLSPAGLAQYKAGGFQLITPTVVGDKSSVPAAILSELGS
Ga0307482_10691721	3300030730	Hardwood Forest Soil	PTPAAIAFIKYTLSPAGLAQYKAGGFTTITPTLTGSKSDVPSDIASELGA
Ga0302311_107814592	3300030739	Palsa	IGTPTPAAIAFIKYTLSPAGLAQYKAGGFKLITPTVVGDKSAVPADILSELGS
Ga0265460_129912221	3300030740	Soil	TPTPAGTAFIAYTLSPAGLAQYKAGGFKLITPTVVGDKSSVPSAILSELGS
Ga0265746_10279372	3300030815	Soil	SAPGLALYKQGGFTVLTPTLFGSKSDVPASIASELGT
Ga0302325_1007246810	3300031234	Palsa	FVKYTLSPAGLAQYKAGGFTLIPPTVTGSASSVPAAISSELGG
Ga0302326_119937332	3300031525	Palsa	GTPTPAAIAFVKYTLSPAGLAQYKAGGFTLIPPTVTGSASSVPAAISSELGG
Ga0310686_1197831932	3300031708	Soil	AGLAQYKQGGFSLPTPTVFGTASAVPSEISSELGT
Ga0307476_102244021	3300031715	Hardwood Forest Soil	YTLSPAGLALYKQGGFSLPTPTVFGTASAVPSEISSELGT
Ga0306919_113402681	3300031879	Soil	VKYTLSAAGMALYKAGGFTMITPKLTGSMSDVPADIASELGG
Ga0306921_119962911	3300031912	Soil	YTLSPTGLAQYKEGGFSLPTRQVFGSASSVPSEISSELGT
Ga0306926_125255591	3300031954	Soil	PAGLALYKAGGFTLIKPTVSGTTSAVPSSISSELG
Ga0318533_113040901	3300032059	Soil	IAPPSSAGTAYVKYVLSPAGLALYKKGGYIVLKPTAFGTTSAVPSSISSELG
Ga0318525_106369751	3300032089	Soil	IIGTPTPAAIAFVKYTLSAAGMALYKAGGFTMITPKLTGSMSDVPADIASELGG
Ga0311301_1005264313	3300032160	Peatlands Soil	TDAGVAFVKYTLSPAGLALYKAGGFTVLTPTITGSTSSVPAAISSELGG
Ga0335075_101378294	3300032896	Soil	TDAGTAFIAYTLSPAGLAQYKAGGFTLITPTVVGDKTAVPSAITSELGS
Ga0335075_105154041	3300032896	Soil	TDAGTAFIAYTLSPAGLAQYKAGGFTLITPTVVGDKTAVPSAVTSELGS
Ga0335072_101901604	3300032898	Soil	YTLSPAGLAQYKAGGFTLITPTVVGDKTAVPSAITSELGS
Ga0335072_111826591	3300032898	Soil	IGTPTPAGTAFVKYTLSAAGLAQYKAGGFSLLTPTVVGDASAVPADISSELGT
Ga0335077_100548697	3300033158	Soil	AFVKYTLSPAGLAQYKQGGFSLPTPTVFGSASSVPSEISSELGG
Ga0370514_071845_2_157	3300034199	Untreated Peat Soil	KPTPAGIAFVKYTLSPAGLAQYKQGGFTLITPTVTGDSSAVPSAVRSELGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082978

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences