Metagenome / Metatranscriptome Family F082973

Basic Information
Family ID	F082973
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	94 residues
Representative Sequence	NFDVLPWMASTFDPPTLIVQGTGDEENTDRWGEYAATVIDSSDNLTFYGVGEYYDTSQTGTTNCSQPAGNCHTWQTRLFRGQYGAPF
Number of Associated Samples	84
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	95.58 %
% of genes from short scaffolds (< 2000 bps)	86.73 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Most Common Taxonomy
Group	Unclassified (61.947 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.699 % of family members)
Environment Ontology (ENVO)	Unclassified (30.088 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.027 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.48% β-sheet: 18.26% Coil/Unstructured: 78.26%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF01229	Glyco_hydro_39	6.19
PF04185	Phosphoesterase	2.65
PF13578	Methyltransf_24	2.65
PF16640	Big_3_5	1.77
PF10131	PTPS_related	1.77
PF01522	Polysacc_deac_1	0.88
PF00072	Response_reg	0.88
PF02706	Wzz	0.88
PF13360	PQQ_2	0.88
PF00078	RVT_1	0.88
PF00437	T2SSE	0.88
PF00685	Sulfotransfer_1	0.88
PF12760	Zn_Tnp_IS1595	0.88
PF11790	Glyco_hydro_cc	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3664	Beta-xylosidase	Carbohydrate transport and metabolism [G]	6.19
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	2.65
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.88
COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	Cell wall/membrane/envelope biogenesis [M]	0.88
COG3524	Capsule polysaccharide export protein KpsE/RkpR	Cell wall/membrane/envelope biogenesis [M]	0.88
COG3765	LPS O-antigen chain length determinant protein, WzzB/FepE family	Cell wall/membrane/envelope biogenesis [M]	0.88
COG3944	Capsular polysaccharide biosynthesis protein YveK	Cell wall/membrane/envelope biogenesis [M]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.95 %
All Organisms	root	All Organisms	38.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.95 %
cellular organisms	root	All Organisms → cellular organisms	38.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.95 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.17 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	18.58 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.95 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.16 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.88 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.16 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.88 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.88 %
Thermoprotei	class	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.16 %
Chloroflexi bacterium 13_1_20CM_2_59_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	0.88 %
unclassified Thermoprotei	no rank	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → unclassified Thermoprotei	0.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.16 %
Thermoprotei archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → unclassified Thermoprotei → Thermoprotei archaeon	0.88 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.88 %
Chloroflexi bacterium 13_1_20CM_2_59_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10198940	Not Available	791	Open in IMG/M
3300004091\|Ga0062387_101103677	Not Available	615	Open in IMG/M
3300004633\|Ga0066395_11033814	Not Available	502	Open in IMG/M
3300004635\|Ga0062388_100060491	All Organisms → cellular organisms → Bacteria	2526	Open in IMG/M
3300005437\|Ga0070710_10692880	Not Available	718	Open in IMG/M
3300005610\|Ga0070763_10053775	All Organisms → cellular organisms → Bacteria	1922	Open in IMG/M
3300006050\|Ga0075028_100111537	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300006176\|Ga0070765_100948340	Not Available	813	Open in IMG/M
3300006176\|Ga0070765_101226224	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300009520\|Ga0116214_1253077	Not Available	669	Open in IMG/M
3300009521\|Ga0116222_1065418	All Organisms → cellular organisms → Bacteria → Acidobacteria	1573	Open in IMG/M
3300009521\|Ga0116222_1152412	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300009523\|Ga0116221_1410056	Not Available	590	Open in IMG/M
3300009665\|Ga0116135_1081306	Not Available	1154	Open in IMG/M
3300009672\|Ga0116215_1038275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2196	Open in IMG/M
3300009698\|Ga0116216_10826425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium 13_1_20CM_2_59_7	555	Open in IMG/M
3300010046\|Ga0126384_11300363	Not Available	674	Open in IMG/M
3300010048\|Ga0126373_10919438	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300010048\|Ga0126373_10941664	Not Available	928	Open in IMG/M
3300010339\|Ga0074046_10565025	Not Available	675	Open in IMG/M
3300010343\|Ga0074044_10025519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4217	Open in IMG/M
3300010343\|Ga0074044_10132049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1675	Open in IMG/M
3300010366\|Ga0126379_13673936	Not Available	514	Open in IMG/M
3300010379\|Ga0136449_100604499	Not Available	1868	Open in IMG/M
3300011120\|Ga0150983_12389669	Not Available	1042	Open in IMG/M
3300011120\|Ga0150983_12505917	Not Available	809	Open in IMG/M
3300011120\|Ga0150983_16180172	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → unclassified Thermoprotei → Thermoprotei archaeon	635	Open in IMG/M
3300014155\|Ga0181524_10285462	Not Available	759	Open in IMG/M
3300014167\|Ga0181528_10235464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300014169\|Ga0181531_10980944	Not Available	530	Open in IMG/M
3300014495\|Ga0182015_10072237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2444	Open in IMG/M
3300014501\|Ga0182024_10420265	All Organisms → cellular organisms → Bacteria → Acidobacteria	1723	Open in IMG/M
3300014501\|Ga0182024_10607324	Not Available	1368	Open in IMG/M
3300015374\|Ga0132255_100292669	All Organisms → cellular organisms → Bacteria	2341	Open in IMG/M
3300017822\|Ga0187802_10128036	Not Available	964	Open in IMG/M
3300017927\|Ga0187824_10335398	Not Available	542	Open in IMG/M
3300017933\|Ga0187801_10183560	Not Available	824	Open in IMG/M
3300017933\|Ga0187801_10491379	Not Available	518	Open in IMG/M
3300017934\|Ga0187803_10091021	Not Available	1198	Open in IMG/M
3300017934\|Ga0187803_10148778	Not Available	921	Open in IMG/M
3300017943\|Ga0187819_10333175	Not Available	879	Open in IMG/M
3300017972\|Ga0187781_11386477	Not Available	520	Open in IMG/M
3300017973\|Ga0187780_10217992	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300017975\|Ga0187782_10181652	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300017995\|Ga0187816_10019727	Not Available	2633	Open in IMG/M
3300017995\|Ga0187816_10033028	All Organisms → cellular organisms → Bacteria	2108	Open in IMG/M
3300018009\|Ga0187884_10156045	Not Available	960	Open in IMG/M
3300018034\|Ga0187863_10412151	Not Available	753	Open in IMG/M
3300018062\|Ga0187784_10276645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1365	Open in IMG/M
3300018086\|Ga0187769_10704466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300018086\|Ga0187769_10995675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300018086\|Ga0187769_11081543	Not Available	607	Open in IMG/M
3300018088\|Ga0187771_10000378	All Organisms → cellular organisms → Bacteria	27019	Open in IMG/M
3300018088\|Ga0187771_10092563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2423	Open in IMG/M
3300018088\|Ga0187771_10412508	Not Available	1139	Open in IMG/M
3300018088\|Ga0187771_10482846	All Organisms → cellular organisms → Bacteria → Acidobacteria	1048	Open in IMG/M
3300018088\|Ga0187771_11583768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	556	Open in IMG/M
3300018090\|Ga0187770_10124959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1942	Open in IMG/M
3300018090\|Ga0187770_10442488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1024	Open in IMG/M
3300018090\|Ga0187770_11696312	Not Available	516	Open in IMG/M
3300019275\|Ga0187798_1623877	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300020580\|Ga0210403_11310800	Not Available	553	Open in IMG/M
3300020581\|Ga0210399_10585079	Not Available	924	Open in IMG/M
3300020581\|Ga0210399_11446980	Not Available	535	Open in IMG/M
3300021170\|Ga0210400_11276243	Not Available	589	Open in IMG/M
3300021181\|Ga0210388_11169229	Not Available	654	Open in IMG/M
3300021401\|Ga0210393_11460199	Not Available	545	Open in IMG/M
3300021405\|Ga0210387_11563383	Not Available	562	Open in IMG/M
3300021407\|Ga0210383_10167252	All Organisms → cellular organisms → Bacteria	1874	Open in IMG/M
3300021407\|Ga0210383_10507162	Not Available	1041	Open in IMG/M
3300021432\|Ga0210384_10722837	Not Available	891	Open in IMG/M
3300021433\|Ga0210391_10616025	Not Available	852	Open in IMG/M
3300021433\|Ga0210391_10751728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300021474\|Ga0210390_10876179	Not Available	740	Open in IMG/M
3300021477\|Ga0210398_10609710	Not Available	886	Open in IMG/M
3300021478\|Ga0210402_10294020	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300021559\|Ga0210409_11476920	Not Available	556	Open in IMG/M
3300022715\|Ga0242678_1033403	Not Available	687	Open in IMG/M
3300022731\|Ga0224563_1001365	Not Available	1386	Open in IMG/M
3300022731\|Ga0224563_1001713	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300022732\|Ga0224569_114072	Not Available	559	Open in IMG/M
3300022733\|Ga0224562_1000714	All Organisms → cellular organisms → Bacteria	2149	Open in IMG/M
3300025612\|Ga0208691_1150439	Not Available	524	Open in IMG/M
3300026530\|Ga0209807_1053311	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300027745\|Ga0209908_10042759	Not Available	973	Open in IMG/M
3300027767\|Ga0209655_10031125	All Organisms → cellular organisms → Bacteria → Proteobacteria	1785	Open in IMG/M
3300027853\|Ga0209274_10355243	Not Available	755	Open in IMG/M
3300027853\|Ga0209274_10646124	Not Available	546	Open in IMG/M
3300027854\|Ga0209517_10174934	Not Available	1349	Open in IMG/M
3300027986\|Ga0209168_10554656	Not Available	552	Open in IMG/M
3300029957\|Ga0265324_10278751	Not Available	568	Open in IMG/M
3300030578\|Ga0210275_10129004	Not Available	731	Open in IMG/M
3300030738\|Ga0265462_11415375	Not Available	640	Open in IMG/M
3300030740\|Ga0265460_12901460	Not Available	515	Open in IMG/M
3300030759\|Ga0265745_1017069	Not Available	605	Open in IMG/M
3300031057\|Ga0170834_103949146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300031090\|Ga0265760_10153517	Not Available	756	Open in IMG/M
3300031090\|Ga0265760_10375721	Not Available	511	Open in IMG/M
3300031231\|Ga0170824_100237455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300031708\|Ga0310686_103038064	Not Available	4124	Open in IMG/M
3300031708\|Ga0310686_103161559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300031708\|Ga0310686_105717400	All Organisms → cellular organisms → Bacteria → Acidobacteria	4934	Open in IMG/M
3300031708\|Ga0310686_107613285	Not Available	525	Open in IMG/M
3300031718\|Ga0307474_10965386	Not Available	675	Open in IMG/M
3300032160\|Ga0311301_12317027	Not Available	610	Open in IMG/M
3300032515\|Ga0348332_12646393	Not Available	736	Open in IMG/M
3300032515\|Ga0348332_14659193	Not Available	807	Open in IMG/M
3300032828\|Ga0335080_10235520	All Organisms → cellular organisms → Bacteria	2004	Open in IMG/M
3300032828\|Ga0335080_12171458	Not Available	534	Open in IMG/M
3300032893\|Ga0335069_10317725	Not Available	1849	Open in IMG/M
3300032954\|Ga0335083_10051374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4359	Open in IMG/M
3300033402\|Ga0326728_10837324	Not Available	663	Open in IMG/M
3300033977\|Ga0314861_0032062	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3121	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.35%
Host-Associated	Host-Associated	2.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.65%
Aquatic	Environmental → Aquatic	17.70%
Plants	Host-Associated → Plants	2.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.99%
Freshwater	Environmental → Aquatic → Freshwater	16.81%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.77%
Sediment	Environmental → Aquatic → Sediment	0.89%
Peat	Environmental → Terrestrial → Peat	0.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	24.78%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.81%
Loam	Environmental → Terrestrial → Soil → Loam	8.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.12%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	21.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.35%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.08%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.54%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.77%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.70%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	13.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.54%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.65%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.77%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.77%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.77%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.77%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.89%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300022732	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1	Host-Associated	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300030578	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO105-VCO054SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030759	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_101989401	3300001356	Peatlands Soil	NFDVLPWMASTFDPPTLIVQGTGDEENTDRWGEYAATVIDSSDNLTFYGVGEYYDTSQTGTTNCSQPAGNCHTWQTRLFRGQYGAPF*
Ga0062387_1011036771	3300004091	Bog Forest Soil	LGIAYTTSGPYCSECQSPNDPAINFDVLPWNSSTFDVPTLIVQGTGDEENTDRWGEYAATVIDSSDNLTFYGLGEYFNTSQTGTTNCVQPASNCHTWQTRLFRGQFEEKRGQKPSQ*
Ga0066395_110338142	3300004633	Tropical Forest Soil	DQPTLIMQGAGDEENTDRFGQYAATSIDSTDNMTFYGLGEYFNKNQTGTTNCGQPSSNCYTWQTRIFRGQYGSQF*
Ga0062388_1000604911	3300004635	Bog Forest Soil	INFDVLPWNSSTFDVPTLIVQGTGDEENTDRWGEYAATVIDSSDNLTFYGLGEYFNTSQTGTTNCVQPASNCHTWQTRLFRGQFEEKRGQEPSQ*
Ga0070710_106928802	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VLPWGHSTFDAPTLIVQGAGDQENTDRFGQYAATVVDSTDNLTFYGMGEYYNKDQTGTSNCQLPASNCYTWQTRIFRGRYGNQF*
Ga0070763_100537751	3300005610	Soil	SGTQGHPAMYFTVLPWGTTTFDTPTLIVQGAGDEENTDRFGQYAATLIDSSDNLTFYGVGEYYNTSQTGTANCNLPSSNCYTWQTRIFRGQYGTQFH*
Ga0075028_1001115372	3300006050	Watersheds	TTSGAHCSTCQTQNTPALNFDVLPWMASSLDPPTLIVQGTGDEENTDRWGEYAATVIDPSDNLTFYGVGEYFNTSQTGTTFCFQPASNCHTWQTRLFRGKYGAPF*
Ga0070765_1009483402	3300006176	Soil	IIQGTGDEENTNHWGEYAATVVDSTDDLTFYGVGEYFNTSQTGTTDCSQPASDCHTWQTRIFRLTAGTNKKKKK*
Ga0070765_1012262243	3300006176	Soil	TPIIAGTGDEENTYHWGQYAATVIDPTDNLTFYGVGEYFNTSQTGTSNCTQPASDCYTWQTRIFREKAAF*
Ga0116214_12530772	3300009520	Peatlands Soil	ALDQNGNLGIAYTTSGPYCSQCQSPNEPAINFDVLPWNSTSFDVPTLIVQGTGDEENTNRWGEYAATVIDSSDNLTYYGVGEYFNTSQTGTTNCGQPASNCHTWQTRLFRGQF*
Ga0116222_10654181	3300009521	Peatlands Soil	ASSFDPPTLIVQGAANEGNTFHWGEYAATVIDSTDNLTFYGVGEYFNTSQNGGSNCKVPASDCYTWQTRIFRGKYGSTF*
Ga0116222_11524121	3300009521	Peatlands Soil	YCSTCQTQAHPAIYFDVLPWASTSFDTSTLIIGGTADAENSIHWGEYAATVIDPTDNLTFYGVGEYFNTNQTGKTGCTVPANDCYTWQTRILRGQYGNPF*
Ga0116221_14100561	3300009523	Peatlands Soil	NLGIAYTTSGPYCSQCQSPNEPAINFDVLPWNSTSFDVPTLIVQGTGDEENTNRWGEYAATVIDSSDNLTYYGVGEYFNTSQTGTTNCGQPASNCHTWQTRLFRGQF*
Ga0116135_10813061	3300009665	Peatland	TCQAQPHPAIHFDVLPWGASSFDTPTLIVQGAGDEESTPRWGEYAATVVDSTNDLTFYGVGEYYNTSETGTASCWLPASDCYTWQTRIFRGQYGIQF*
Ga0116215_10382751	3300009672	Peatlands Soil	GAYCNSCQTQNHPALNFDVLPWMASSFDPPTLIVQGAANEGNTFHWGEYAATVIDSTDNLTFYGVGEYFNTSQNGGSNCKVPASDCYTWQTRIFRGQYGSTF*
Ga0116216_108264251	3300009698	Peatlands Soil	QTQAHPANYFDVLPWAATSLDTPTLIIAGTADAENSIHWGEYAATVIDPSDNLTFYGVGEYFNTNQTGKTGCTVPANDCYTWQTRILRGQYGNPF*
Ga0126384_113003632	3300010046	Tropical Forest Soil	GFAFTASGTQAHPGIYFAVLPWAAATFDPATLIVQGAGDEENTDRFGQYAATLIDSSDNMTFYGVGEYFNKSQTGTTNCGQPSSNCYTWQTSIFRGQYGSQFH*
Ga0126373_109194382	3300010048	Tropical Forest Soil	VDVLPWGASSFDAPVLIVQGAGDEENTDRWGEYAATVVDSSDDLTFYGVGEYFNTSQIGTTNCTKPSSECYTWQTRIFRGIASTLTRF*
Ga0126373_109416641	3300010048	Tropical Forest Soil	AIYFAVLPWGAPTFDSATLIVQGMGDQENTQRYGEYAATVIDSTDNMTFYGVGEYYNRSQTGNTNCNQPSSNCYTWQTRIFRGQYGSQFR*
Ga0074046_105650252	3300010339	Bog Forest Soil	DASTLIVQGTGDEDNTLHWGEYAATVIDPGDNLTFYGVGEYFNTSQTGKTACGTPSSNCYTWQTRIFRGQYGNGFK*
Ga0074044_100255191	3300010343	Bog Forest Soil	QGMGDEENTDRWGEYAATVIDSSDNLTFYGIGEYYNTSQTGRTFCSQPASNCHTWQTRLFRAQYGTHF*
Ga0074044_101320491	3300010343	Bog Forest Soil	QGMGDEENTDRWGEYAATVIDSSDNLTFYGIGEYYNTSQTGWTFCSQPASNCHTWQTRLFRAQYGTHF*
Ga0126379_136739362	3300010366	Tropical Forest Soil	LDQNGNMGFAFTASGTQAHPGVYFTVLPWGTTTFDSPTLIVQGAGDEENTDRFGQYAATLIDSSDNMTFYGVGEYFTKNQTGTTNCGQPSSNCYTWQTRIFRGQYGSQF*
Ga0136449_1006044991	3300010379	Peatlands Soil	ALDQNGNLGIAYTTSGAYCSTCQVQNYPAINFDVLPWNSLSFDPPTLIVQGKGDEENTDRFGEYAATVIDSSDNLTFYGIGEYYDTSQTGLTNCSVPASNCHTWQTRIFRGQYGIQF*
Ga0150983_123896691	3300011120	Forest Soil	ILIVQGTGDEENTGRWGEYAATVIDSSDNLTFYGLGEYFNTSQTGTTNCGQPASNCHTWQTRLFRGQFEERRGRKPLQ*
Ga0150983_125059171	3300011120	Forest Soil	TTFAPPTLIVQGAGDQENVDRFGEYAATVIDSSDSLTFYGVGQYYNTSQTGWTNCSLPASNCHTWQTRIFRGKYGTQF*
Ga0150983_161801722	3300011120	Forest Soil	ALDKNGNLGVTYTTSGFYCSTCTTQAHPAIYFDVLPWMTSSFDPATLIVSGAGDEENTHFWGEYAATVIDPTDNLTFYGLGQYFDTSQTGTANCSVPSSNCYTWQTRILRGKYGSGF*
Ga0181524_102854622	3300014155	Bog	LDQDGNLGIAYTTSGEYCASCQTPNHPALNFDVLPWTANSFDPPTLIVQGAGDEENTDRWGEYAATVMDSSDDLTFYSVGEYYNTSQTGTTNCGQPASNCHTWQTRIFRGKYGTQF*
Ga0181528_102354641	3300014167	Bog	MGFTFTASGPNCSSCSAGDQPHPALAFEVLPWGASNFDGPTLIMQGTADQENNDRWGEYAATVVDTTDGVTFYGVGEYYTVNQSGTSGCSQPTSDCYTWQTRIFRGAYGTTF*
Ga0181531_109809442	3300014169	Bog	AFNVLPWGAANFDGPTLIVQGTADQENNDRWGEYAATVVDSTDGLTFYGVGQYYTVNESGTTGCSVPSSDCYTWQTRIFRGQYGTTF*
Ga0182015_100722374	3300014495	Palsa	PWRTSNFDPPTLIVQGAGDEENTDRWGEYAATVIDSSDNLTFYGVGEYYNTSETGTTNCGAPAGDCYTWQTRIFRGQFGAPF*
Ga0182024_104202652	3300014501	Permafrost	ASSLNPPTLIVQGMGDEENTDRWGEYAATVIDSSDNLTFYGLGEYYNTSQTGYTYCSQPDSECHTWQTRLFRAQSGTRF*
Ga0182024_106073241	3300014501	Permafrost	ASSLNPPTLIVQGMGDEENTDRWGEYAATVIDSSDNLTFYGIGEYYNTSQTGYTYCSQPDSECHTWQTRLFRAQSGTHQR*
Ga0132255_1002926691	3300015374	Arabidopsis Rhizosphere	GAGDQENTDRFGQYAATVVDSTDNLTFYGMGEYYNKDQTGTSNCQLPASNCYTWQTRIFRGRYGNQF*
Ga0187802_101280361	3300017822	Freshwater Sediment	NGNLGIAFTTSGAYCSTCQTQNYPAINFDVLPWMASSLDPPTLIVQGAGDEENTDRWGEYAATVIDSSDNLTFYGVGEYYDASQTGTKDCSQPASNCHTWQTRLFRGQYGAPF
Ga0187824_103353981	3300017927	Freshwater Sediment	MPSAALDQDGNLGIAFTSSGPHCSSCQVQKHPAINVDVLPWKASTLDAPTLIVQGAADQQNTDRFGEYAATLLDSSDNLTFYGVGEYYMTNQNGTSNCGVPSSNCHTWQTRIFRGQYGAPFNSLAAH
Ga0187801_101835601	3300017933	Freshwater Sediment	MALSPDPATLIIAGEGDEENTFHWGEYAATVIDPGDNLTFYGVGEYFNTNQTGKTGCTNPASDCYTWQTRLLRGQYGNPF
Ga0187801_104913791	3300017933	Freshwater Sediment	NEPGINFDVLPWNSNSFAVPTLIVQGTGDEENTDRWGEYAATVIDSSDNLTYYGVGEYFNTSQTGTTNCGRPASNCHTWQTRLFRGQFEERRGRKPSQ
Ga0187803_100910211	3300017934	Freshwater Sediment	YTTSGAYCSGCQTQYHPAINFDVLPWGTSSFDPPTLIIQGTGDEENALNWGEYAATVIDSTDNLTFYGVGEYFNTNQTGHKNCKQPSSNCYTWQNRIFRTSLGSGSH
Ga0187803_101487782	3300017934	Freshwater Sediment	YTTSGAYCSGCQTQYHPAINFDVLPWGTSSFDPPTLIIQGTGDQENTSNWGEYAATVIDPGDNLTFYGVGEYYNTSQTGTSNCGTPSSNCYTWQTRIFRGQYGNGFNK
Ga0187819_103331752	3300017943	Freshwater Sediment	PWMAASFDPPTLIVQGQRDQENTDRFGEYAATVIDPSDNLTFYGIGEYYNTSQTGRTDCSQPASNCHTWQTRLLRGKYGVQF
Ga0187781_113864771	3300017972	Tropical Peatland	YQPSMAMDQNGNLGIAYTTSGLLSDPAVNFVVLPWNSTTTDTPTLIIQGQGDEENTYHWGEYAATVLDSTDNLTFYGIGEYFNTSQTGTSGCSAPSSNCYTWQTRIFRGQYGNPF
Ga0187780_102179921	3300017973	Tropical Peatland	PTLIVQGAGDQENTDRFGQYAATVVDSTDNLTFYGMGEYYNKSETGTTNCSVPASNCYTWQTRIFRGQYGQF
Ga0187782_101816521	3300017975	Tropical Peatland	LPSAALDMNGNLGISFTTSGAHCSSCQTQYNPAINFDVLPWGASSFDPPTLIIQGTGDQENAPNWGEYAATVIDPTDNLTFYGVGQYFNTSQTGTSSCKNPSSDCFTWQTRIFRMP
Ga0187816_100197271	3300017995	Freshwater Sediment	TLIVQGTGDEENTDRWGEYAATVIDSSDNLTYYGVGEYFNTSQTGTTNCGRPASNCHTWQTRLFRGQYEERRGRKPSQ
Ga0187816_100330282	3300017995	Freshwater Sediment	CQTQNYPAINFDVLPWMASSLDPPTLIVQGAGDEENTDRWGEYAATVIDSSDNLTFYGVGEYYDTSQTGTKDCSQPASNCHTWQTRLFRGQYGAPF
Ga0187884_101560452	3300018009	Peatland	SECQSPNDPAINFDVLPWNSSTFDVPTLIVQGTGDEENTDRWGEYAATVIDSSDNLTFYGLGEYFNTSQTGTTNCVQPASNCHTWQTRLFRGQFEEKRGQKPSQ
Ga0187863_104121511	3300018034	Peatland	YCSECQSPNDPAINFDVLPWNSSTFDVPTLIVQGTGDEENTDRWGEYAATVIDSSDNLTFYGLGEYFNTSQTGTTNCVQPASNCHTWQTRLFRGQFEEKRGQKPSQ
Ga0187784_102766451	3300018062	Tropical Peatland	IAYTTSGAYCSTCQTQYNPAINFDVLPWETTSFDTPTLIVQGTGDQENTLNWGEYAATVIDPGDNLTFYGVGEYYNTSQTGTSSCGTPSSDCYTWQTRIFRGQYGNGFKSTNKK
Ga0187769_107044662	3300018086	Tropical Peatland	AALDMNGNLGITYSTSGPYCSTCQTQSHPALYFDSLAWGSSTLNSPTLIIQGTGDQENASTWGEYAATVMDSTDDLTFYGVGQYFDTSQTGTSKCASPSSECFTWQNRIFRMQAGSN
Ga0187769_109956751	3300018086	Tropical Peatland	TPTLIIAGSGDEENTYHWGEYASTVVDSSDDLTFYGVGEYFDTSQTGTSKCASPSSECFTWQNRIFRMQAGSN
Ga0187769_110815431	3300018086	Tropical Peatland	WGGTTLDTPGLIVQGQGDEENTDRYGEYAATVLDSSDNLTFYGVGEYYNVNQTGTSGCQYPANDCYTWQTRIFRGQYGSQFQ
Ga0187771_1000037825	3300018088	Tropical Peatland	EYCSSCQTQPHPAVNFDVLPWGGSSFDTPTLIIQGQGDEENVNNWGEYAATVIDSTDSLTFYGVGEYFNTSQTGTTDCSQPSSNCHTWQTRIFRGQYGNGFR
Ga0187771_100925631	3300018088	Tropical Peatland	NGNLGIAYTSSGAYCASCQTQYHPALNFDVLPWGASSFNPPTLITQGTGDEENALNWGEYAATVIDPGDNLTFYGVGEYFNTSQTGTSKCNNPASDCFTWQNRIFRTQSGSRSR
Ga0187771_104125082	3300018088	Tropical Peatland	MGKRSVRAQTLRLDPPTRIIQGTGDQENALNWGECAATVIDATDNPTFYGVGQYYNTSQTGTSGCTNPSSNCVTGQGRIFRAQAGTGSH
Ga0187771_104828462	3300018088	Tropical Peatland	ASNLDTPTLIVQGQGDEENSVHWGEYAATVIDSTGNRTFYGVGEYFNTSQTGTKGCGKPSSECFTWRNRIFRGRYGIRFELSETQD
Ga0187771_115837681	3300018088	Tropical Peatland	PWGASSPDPPTLIIQGTGDQENGPNWGEYAATVIDPTDNLTFYGVGQYFNTSQTGTSSCKNPSSDCFTWQTRIFREP
Ga0187770_101249591	3300018090	Tropical Peatland	SFDAPTLIIQGTGDQENNLHWGEYAATVIDPGDNLTFYGVGEYYNTSQTGTSNCATPSSNCYTWQTRIFRGQYGNGFSKAKR
Ga0187770_104424881	3300018090	Tropical Peatland	MNGNLGFTYTTSGPYCSSCQTQNHPALYFDSLAWGSSTPNSPALIIQGAGDEENFSSWGEYAATVIDSTDDLTFYGVGQYFDTSQTGTSNCMKPSSECFTWQNRIFRMQAGSN
Ga0187770_116963121	3300018090	Tropical Peatland	TSGPYCSTCQTQSHPALYFDSLAWGSSTLNSPTLIIQGTGDQENASTWGEYAATVMDSTDDLTFYGLGQYFDTSQTGTSKCASPSSECFTWQNRIFRMQAGSN
Ga0187798_16238772	3300019275	Peatland	MGKWSVQAQTLRLDPPTLIIQGTGDQENALNWGEYAATVIDATDNLTFYGVGQYFNTSQTGTSSCKNPSSDCFTWQTRIFRGP
Ga0210403_113108001	3300020580	Soil	AALDQNGNLGIAYTTSGPYCSECQSPNQPAINFDVLPWMASSFNPPTLIVQGTGDEENTDRWGEYAATVIDSSDNLTYYGVGEYFNTSQTGTTDCGQPASNCHTWQTRLFRGQF
Ga0210399_105850791	3300020581	Soil	TSGAYCASCQTQNHPAINFDVLPWTASTFDPPTLIVQGTGDEENSDRWGEYAATVIDSSDNLTFYGVGEYYDTNQTGTTNCSQPAGNCHTWQTRLFRGQYGAPF
Ga0210399_114469802	3300020581	Soil	TSGPYCSECQSPNQPTINFDVLPWMASSFNPPTLIVQGTGDEENTDRWGEYAATVIDSSDNLTYYGVGEYFNTSQTGTTNCGQPASNCHTWQTRLFRGQF
Ga0210400_112762431	3300021170	Soil	NHPAINVDVLPWAASSFDPPTLIVQGTGDEENTDRWGEYAATVIDSSDNLTFYGLGEYFNTSQTGENTCGQPANDCHTWQTRLFRGQYGAPF
Ga0210388_111692292	3300021181	Soil	FDVLPWGASSFDTPTLIVQGAGDEESTPRWGEYAATVVDSTNDLTFYGVGEYYNTSETGTASCWLPASDCYTWQTRIFRGQYGIQF
Ga0210393_114601991	3300021401	Soil	PNDPAINIDVLPWNSSTFDVPTLIVQGTGDEENTDRWGEYAATVIDSSDNLTFYGLGEYFNTSQTGTTNCVEPASNCHTWQTRLFRGQFEEKRGQKPSQ
Ga0210387_115633832	3300021405	Soil	GFTFTTSGPACSSCSQQPHPALNFVVLPWESTTFDTPTTIVQGTGDQENQDRYGEYAATVVDSTDGLTFYGVGQYYDTNQTGTANCTKPASACYTWQTRIFRGKYNNPF
Ga0210383_101672522	3300021407	Soil	GAYCSSCQTQNDPAINFDVLPWMASSLDPPTLIVQGTGDEENTDRWGEYAATVIDSSDNLTFYGVGQYYDTSQTGTTNCSQPASECHTWQTRLFRGQYGDHF
Ga0210383_105071622	3300021407	Soil	LDQNGNLGIAYTTSGAYCASCQTQNHPAINFDVLPWTASTFDPPTLIVQGTGDEENSDRWGEYAATVIDSSDNLTFYGVGEYYDTNQTGTTNCSQPAGNCHTWQTRLFRGQYGAPF
Ga0210384_107228372	3300021432	Soil	DLFYFMPSAALDQNGNLGISYSTSGAFCGRCHPQNHPGISFDVLPWAASSFVPPTSIVQGTGDEENTDRWGEYAATVIDSSDNLTFYGVGEYFNTSQTGSTNCSQPASNCHTWQTRLFRGQFGAQF
Ga0210391_106160252	3300021433	Soil	DVLPWGASSFDTPTLIVQGAGDEESTPRWGEYAATVVDSTNDLTFYGVGEYYNTSETGTASCWLPASDCYTWQTRIFRGQYGIQF
Ga0210391_107517282	3300021433	Soil	NLGVTYTTSGFYCSTCTTQAHPAIYFDVLPWMTSSFDPATLIVSGPGDEENTHFWGEYAATVIDPTDNLTFYGLGQYFDTSQTGTANCSVPSSNCYTWQTRILRGKYGSGF
Ga0210390_108761791	3300021474	Soil	GIAYTSSGPYCSSCQTQNHPAINVDVLPWAASSFDPPTLIVQGTGDEENTDRWGEYAATVIDSSDNLTFYGLGEYFNTSQTGENTCGQPANDCHTWQTRLFRGQYGAPF
Ga0210398_106097101	3300021477	Soil	INFDVLPWTASTFDPPTLIVQGTGDEENSDRWGEYAATVIDSSDNLTFYGVGEYYDTNQTGTTNCSQPAGNCHTWQTRLFRGQYGAPF
Ga0210402_102940202	3300021478	Soil	LIVQGAGDEENTDRFGQYAATLIDSSDNLTFYGVGEYYNTSQTGTANCNLPSSNCYTWQTRIFRGQYGTQFH
Ga0210409_114769201	3300021559	Soil	AALDQNGNLGIAFTTSGAVCSTCQPPNNPAVNFDVLPWMASSFDQPTPIVQGAGDQENTDRWGEYAATVIDSSDNLTFYGMGEYYNTSQTGTTFCSLPASNCHTWQTRLFRGKYGAPF
Ga0242678_10334032	3300022715	Soil	WMASSFDPPTLIVQGAGDEENTDRWGEYAATVIDSSDNLTFYGVGQYYDTSQTGRTDCSQPASNCHTWQTRLFQGKYGAPF
Ga0224563_10013651	3300022731	Soil	INVDVLPWTASSLDPPTLIVQGAGDQENTDRWGEYAATVIDSSDNLTFYGLGEYYNTSQTGENTCGQPANDCHTWQTRLFRGQYGAPF
Ga0224563_10017131	3300022731	Soil	FDGTTLIVQGTGDQENNDRWGEYAATVVDSTDGLTFYGVGEYYDVNQTGLTDCSVPSSDCYTWQTRIFRGAYGTTF
Ga0224569_1140721	3300022732	Rhizosphere	DVLPWGASSFDGTTLIVQGTGDQENNDRWGEYAATVVDSTDGLTFYGVGEYYDVNQTGLTDCSVPSSDCYTWQTRIFRGAYGTTF
Ga0224562_10007141	3300022733	Soil	DVLPWGASSFDGTTLIVQGTGDQENNDRWGEYAATVVDSTDDLTFYGVGEYYDVNQTGLTGCSVPSSDCYTWQTRIFRGAYGTTF
Ga0208691_11504392	3300025612	Peatland	AIHFDVLPWGASSFDTPTLIVQGAGDEESTPRWGEYAATVVDSTNDLTFYGVGEYYNTSETGTASCWLPASDCYTWQTRIFRGQYGIQF
Ga0209807_10533112	3300026530	Soil	TYNTSGQFCSGCNQNHPALHFDVLPKGAITFDLPTLIVQGTADQQNQNRWGQYAATVMDTSDNLTFYGVGQYYKTNQNGTSNCTVPASNCYTWQSRIFRGKYGVTF
Ga0209908_100427592	3300027745	Thawing Permafrost	ASSFDSPTLIISGTGDEENTNHWGEYAATVVDPTDNLTFYGVGEYFNTSQTGTSGCSVPTSDCYTWQTRIFRGKYGVTF
Ga0209655_100311251	3300027767	Bog Forest Soil	YCSSCQTPNYPALNFVALPWMASSFAAPTAIIQGTGDEENTNHWGEYAATVVDSTDDLTFYGVGEYFNTSQTGTTDCSLPASDCHTWQTRIFRLTAGTNKKKKK
Ga0209274_103552432	3300027853	Soil	NGNLGFTYTTSGAYCSSCQTPNYPALNFVALPWMASSFAAPTGIIQGTGDEENTNHWGEYAATVVDSTDDLTFYGVGEYFNTSQTGTTDCSQPASDCHTWQTRIFRLTAGTNKKKKK
Ga0209274_106461241	3300027853	Soil	ALNFDTPSLIVQGAGDQENQDRYGEYAATVVDSTDDLTFYGVGQYYNTNQTGTASCTKPSSDCYTWQTRIFRGKYTAPF
Ga0209517_101749341	3300027854	Peatlands Soil	FMPSAALDQNGNLGIAYTTSGPYCSQCQSPNEPAINFDVLPWNSTSFDVPTLIVQGTGDEENTNRWGEYAATVIDSSDNLTYYGVGEYFNTSQTGTTNCGQPASNCHTWQTRLFRGQF
Ga0209168_105546562	3300027986	Surface Soil	PYCSSCQTQNNPAVNFVVLPWMSSGFDSPTSIVQGTGDQENTDRFGQYAATVVDSTDGLTFYGVGQYYDKSETGTGNCGVPSSNCYTWQTRIFRGQYGEF
Ga0265324_102787511	3300029957	Rhizosphere	HSTFDTPTLIVQGSGDQENTDRFGQYAATVVDSSDNLTFYGIGEYYNKSETGTNNCQLPASNCYTWQTRIFRGQYGSQF
Ga0210275_101290042	3300030578	Soil	FTASGPNCSSCQSQPHPAIAFDVLPWGASSFDGTTLIVQGTGDQENNDRWGEYAATVVDSTDGLTFYGVGEYYDVNQTGLTDCSVPSSDCYTWQTRIFRGAYGTTF
Ga0265462_114153751	3300030738	Soil	VLPWNSSSFDVPTLIVQGTGDEENTDRWGEYAATVIDSSDNLTYYGLGEYFNTSQTGTTNCGQPASNCHTWQTRLFRGQF
Ga0265460_129014601	3300030740	Soil	SGAYCNSCQTQNHPALNFDVLPWMASSFDPPTLIVQGAANEGNTFHWGEYAATVIDSTDNLTFYGGGEYFNTSQNGGSSCNLPASNCYTWQTRIFRGKYGSTF
Ga0265745_10170691	3300030759	Soil	SGPYCSTCQTQNHPAINVDVLPWTASSLDPPTLIVQGTGDEENTDRWGEYAATVIDSSDNLTFYGVGQYYDTSQTGTTNCSQPASECHTWQTRLFRGQYGDHF
Ga0170834_1039491461	3300031057	Forest Soil	TTFAPPTLIVQGTGDQENVDRFGEYAATVIDSSDHLTFYGVGQYYDKSQTGLTNCSLPTSNCHTWQTRIFRGKYGTQF
Ga0265760_101535171	3300031090	Soil	FGQLIPIVAGTGDEENTYHWGQYASTVIDPTDNLTFYGVGEYFDTSQTGTSNCSQPASDCYTWQTRIFRTKFAF
Ga0265760_103757211	3300031090	Soil	LGMTFTTSGTQGDPAIWFDVLPWNTSAFDPATVIVQGKGDQENTDRFGEYAATVIDSSDNLTFYGIGEYYDTNQTGTTKCGAISSRCYTWQTRIFHGKYGEF
Ga0170824_1002374552	3300031231	Forest Soil	PAINFDVLPWTATTFAPPTLIVQGTGDQENVDRFGEYAATVIDSSDHLTFYGVGQYYDKSQTGLTNCSLPTSNCHTWQTRIFRGKYGTQF
Ga0310686_1030380643	3300031708	Soil	FDVLPWGASSFDGTTLIVQGTGDQENNDRWGEYAATVVDSTDDLTFYGVGEYYDVNQTGLTGCSVPSSDCYTWQTRIFRGAYGTTF
Ga0310686_1031615591	3300031708	Soil	LPLGISNFGQVSPIVAGTGDEESTFHWGEYAATVIDPSDDLTFYGVGEYFNTSETGTSNCSLPSSDCYTWQTRIFRAKAVF
Ga0310686_1057174006	3300031708	Soil	FDVLPWMASSFDPPTLIMQGAGDEENTDRWGEYAATVIDSSDNLTFYGVGQYYDTSQTGRTDCSQPASNCHTWQTRLFRGKYGAPF
Ga0310686_1076132852	3300031708	Soil	FDVLPWGASSFDGTTLIVQGTGDQENNDRWGEYAATVVDSTDGLTFYGVGEYYDVNQTGLTDCSVPSSDCYTWQTRIFRGAYGTTF
Ga0307474_109653861	3300031718	Hardwood Forest Soil	GPECSSCSQQPHPAVNFVVLPWASTTFDTPTVIVQGTGDQENQDRYGEYASTVIDSTDGLTFYGVGQYYDTNQTGTANCTKPASACYTWQTRIFRGKYGSQF
Ga0311301_123170271	3300032160	Peatlands Soil	PSAALDQNGNLGIAYTTSGAYCSTCQVQNYPAINFDVLPWNSLSFDPPTLIVQGKGDEENTDRFGEYAATVIDSSDNLTFYGIGEYYDTSQTGLTNCSVPASNCHTWQTRIFRGQYGIQF
Ga0348332_126463931	3300032515	Plant Litter	ESTTFDTPTTIVQGSGDQENQDRYGEYASTVVDSTDGLTFYGVGQYYDANQTGTTNCTKPASSCYTWQTRIFRGQYNNPF
Ga0348332_146591931	3300032515	Plant Litter	MASSFDPPTLIVQGAANEGNTFHWGEYAATVIDSTDNLTFYGGGEYFNTSQNGGSSCNLPASNCYTWQTRIFRGKYGSTF
Ga0335080_102355201	3300032828	Soil	DAPTLIVQGTGDQENTDRFGQYAATVVDPSDDLTFYGMGEYYNKSQTGTSNCQLPASNCYTWQTRIFRGKYGSQF
Ga0335080_121714581	3300032828	Soil	WFDVLPWGSSAFDSRTSIVQGAGDEQNSNRFGEYAATVIDSTDNLTFYGLGEYFNTSQSGTSGCGVPSGKCYTWQTRVFRGQYGHPF
Ga0335069_103177252	3300032893	Soil	PALNFTVLPWGSSTPDAPTLIMQGTADEENTSHWGEYAATQIDPTDNLTFYGVGEYFTTTQNGTTNCTVPASNCVTWQTRIFRGKYGTAF
Ga0335083_100513743	3300032954	Soil	VAFDKKGDLGFTFSTSGPFCSSCGTQNHLAVRFDVLPWRATAFDAPTLIVQGTADQENTQRFGEYAATEIDSSDNLTFYGVGQYFTTNETGSTNCSVPASACYTWQTRIFRGAYGSTF
Ga0326728_108373242	3300033402	Peat Soil	DPPTLIVQGAGDEENTDRWGEYAATVMDSSDDLTFYSVGEYYNTSQTGTTNCGQPASNCHTWQTRLFRGKYGTQF
Ga0314861_0032062_2_286	3300033977	Peatland	INFDVLPWGASSLDPPTLIIQGSGDQENALNWGEYAATVIDPGDNLTFYGVGEYYNTSQTGTSNCGNASSDCYTWQTRIFRGQYGNGFKESAKK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082973

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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