Metagenome / Metatranscriptome Family F082878

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082878
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	85 residues
Representative Sequence	VPRPRRDLTTTEKRHLHSLEGRIARLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Number of Associated Samples	88
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	42.73 %
% of genes near scaffold ends (potentially truncated)	60.18 %
% of genes from short scaffolds (< 2000 bps)	76.99 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.690 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand (32.743 % of family members)
Environment Ontology (ENVO)	Unclassified (54.867 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (57.522 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 75.64% β-sheet: 0.00% Coil/Unstructured: 24.36%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF01641	SelR	5.31
PF00011	HSP20	3.54
PF12680	SnoaL_2	1.77
PF12872	OST-HTH	0.88
PF05639	Pup	0.88
PF09954	DUF2188	0.88
PF04185	Phosphoesterase	0.88
PF00009	GTP_EFTU	0.88
PF11716	MDMPI_N	0.88
PF13683	rve_3	0.88
PF08352	oligo_HPY	0.88
PF00574	CLP_protease	0.88
PF10473	CENP-F_leu_zip	0.88
PF00248	Aldo_ket_red	0.88
PF03992	ABM	0.88
PF12146	Hydrolase_4	0.88
PF03435	Sacchrp_dh_NADP	0.88
PF00211	Guanylate_cyc	0.88
PF00027	cNMP_binding	0.88
PF00118	Cpn60_TCP1	0.88
PF02469	Fasciclin	0.88
PF00583	Acetyltransf_1	0.88
PF06210	DUF1003	0.88
PF00196	GerE	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	5.31
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	3.54
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.77
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	1.77
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.88
COG2335	Uncaracterized surface protein containing fasciclin (FAS1) repeats	General function prediction only [R]	0.88
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.88
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.58 %
Unclassified	root	N/A	4.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.58 %
Unclassified	root	N/A	4.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.69 %
Unclassified	root	N/A	4.42 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	79.65 %
Unclassified	root	N/A	4.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	79.65 %
Unclassified	root	N/A	4.42 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	63.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.62 %
Unclassified	root	N/A	4.42 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.88 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	63.72 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.31 %
Unclassified	root	N/A	4.42 %
Haloferacales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	0.88 %
Alteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	63.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.31 %
Unclassified	root	N/A	4.42 %
Haloferacaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae	0.88 %
Aestuariibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Aestuariibacter	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	63.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.31 %
Unclassified	root	N/A	4.42 %
Aestuariibacter salexigens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Aestuariibacter → Aestuariibacter salexigens	0.88 %
Haloferax	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloferax	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	63.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.31 %
Unclassified	root	N/A	4.42 %
Haloferax larsenii	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloferax → Haloferax larsenii	0.88 %
Aestuariibacter salexigens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Aestuariibacter → Aestuariibacter salexigens	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_102206571	All Organisms → cellular organisms → Bacteria → Proteobacteria	1158	Open in IMG/M
3300005161\|Ga0066807_1000073	All Organisms → cellular organisms → Bacteria	3962	Open in IMG/M
3300005169\|Ga0066810_10004090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1829	Open in IMG/M
3300005471\|Ga0070698_101520518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Aestuariibacter → Aestuariibacter salexigens	621	Open in IMG/M
3300005536\|Ga0070697_101817783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	545	Open in IMG/M
3300006224\|Ga0079037_100797986	Not Available	927	Open in IMG/M
3300006576\|Ga0074047_11875522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	592	Open in IMG/M
3300006580\|Ga0074049_13073405	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloferax → Haloferax larsenii	574	Open in IMG/M
3300009078\|Ga0105106_10009485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7035	Open in IMG/M
3300009081\|Ga0105098_10343275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	728	Open in IMG/M
3300009091\|Ga0102851_10217886	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300009091\|Ga0102851_12687540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	571	Open in IMG/M
3300009157\|Ga0105092_10444787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	740	Open in IMG/M
3300009801\|Ga0105056_1035113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	664	Open in IMG/M
3300009807\|Ga0105061_1005115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1561	Open in IMG/M
3300009810\|Ga0105088_1012042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1291	Open in IMG/M
3300009811\|Ga0105084_1004044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1986	Open in IMG/M
3300009812\|Ga0105067_1051255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	656	Open in IMG/M
3300009814\|Ga0105082_1002999	All Organisms → cellular organisms → Bacteria	2091	Open in IMG/M
3300009815\|Ga0105070_1064410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	692	Open in IMG/M
3300009815\|Ga0105070_1088326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	603	Open in IMG/M
3300009816\|Ga0105076_1007780	All Organisms → cellular organisms → Bacteria	1780	Open in IMG/M
3300009818\|Ga0105072_1003730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2493	Open in IMG/M
3300009818\|Ga0105072_1034199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	947	Open in IMG/M
3300009819\|Ga0105087_1053828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	665	Open in IMG/M
3300009819\|Ga0105087_1125370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	502	Open in IMG/M
3300009821\|Ga0105064_1005253	All Organisms → cellular organisms → Bacteria	2178	Open in IMG/M
3300009822\|Ga0105066_1006094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2118	Open in IMG/M
3300009837\|Ga0105058_1006534	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300010029\|Ga0105074_1001711	All Organisms → cellular organisms → Bacteria	2947	Open in IMG/M
3300010166\|Ga0126306_10017760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4652	Open in IMG/M
3300011439\|Ga0137432_1287859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	526	Open in IMG/M
3300012204\|Ga0137374_11111451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	561	Open in IMG/M
3300012204\|Ga0137374_11197792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	532	Open in IMG/M
3300012353\|Ga0137367_10098729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	2153	Open in IMG/M
3300012355\|Ga0137369_10066755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3064	Open in IMG/M
3300012360\|Ga0137375_10905774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	700	Open in IMG/M
3300012532\|Ga0137373_11222442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	529	Open in IMG/M
3300017997\|Ga0184610_1141805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	785	Open in IMG/M
3300018028\|Ga0184608_10028022	All Organisms → cellular organisms → Bacteria	2102	Open in IMG/M
3300018028\|Ga0184608_10275696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	740	Open in IMG/M
3300018053\|Ga0184626_10155949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	971	Open in IMG/M
3300018056\|Ga0184623_10147867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1086	Open in IMG/M
3300018075\|Ga0184632_10044598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1907	Open in IMG/M
3300018075\|Ga0184632_10070370	Not Available	1522	Open in IMG/M
3300018075\|Ga0184632_10145408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1045	Open in IMG/M
3300018076\|Ga0184609_10004921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4632	Open in IMG/M
3300018076\|Ga0184609_10297303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	755	Open in IMG/M
3300018078\|Ga0184612_10004855	All Organisms → cellular organisms → Bacteria	6719	Open in IMG/M
3300018078\|Ga0184612_10091443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1591	Open in IMG/M
3300018078\|Ga0184612_10538333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	563	Open in IMG/M
3300018081\|Ga0184625_10229178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	974	Open in IMG/M
3300018465\|Ga0190269_11070307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	618	Open in IMG/M
3300018469\|Ga0190270_11018047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	856	Open in IMG/M
3300018469\|Ga0190270_12635706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	565	Open in IMG/M
3300018476\|Ga0190274_10027432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3839	Open in IMG/M
3300019249\|Ga0184648_1323732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	792	Open in IMG/M
3300019767\|Ga0190267_10330288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	809	Open in IMG/M
3300019884\|Ga0193741_1094504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	765	Open in IMG/M
3300021073\|Ga0210378_10059226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1505	Open in IMG/M
3300021073\|Ga0210378_10159742	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300021073\|Ga0210378_10169234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	840	Open in IMG/M
3300022195\|Ga0222625_1612020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	779	Open in IMG/M
3300022195\|Ga0222625_1792123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1225	Open in IMG/M
3300022534\|Ga0224452_1014410	All Organisms → cellular organisms → Bacteria	2128	Open in IMG/M
3300022694\|Ga0222623_10321049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	593	Open in IMG/M
3300025167\|Ga0209642_10353718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	828	Open in IMG/M
3300025313\|Ga0209431_11121617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	545	Open in IMG/M
3300025324\|Ga0209640_11050095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	624	Open in IMG/M
3300025325\|Ga0209341_10747928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	747	Open in IMG/M
3300027006\|Ga0209896_1018388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	780	Open in IMG/M
3300027032\|Ga0209877_1004959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1102	Open in IMG/M
3300027056\|Ga0209879_1019158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1134	Open in IMG/M
3300027056\|Ga0209879_1037742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	795	Open in IMG/M
3300027056\|Ga0209879_1066330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	575	Open in IMG/M
3300027163\|Ga0209878_1001234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	3698	Open in IMG/M
3300027163\|Ga0209878_1030624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	702	Open in IMG/M
3300027332\|Ga0209861_1035336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	738	Open in IMG/M
3300027379\|Ga0209842_1003661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3066	Open in IMG/M
3300027379\|Ga0209842_1088861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	530	Open in IMG/M
3300027490\|Ga0209899_1060573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	769	Open in IMG/M
3300027511\|Ga0209843_1000081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13601	Open in IMG/M
3300027511\|Ga0209843_1090233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	519	Open in IMG/M
3300027577\|Ga0209874_1030958	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300027577\|Ga0209874_1055169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1020	Open in IMG/M
3300027577\|Ga0209874_1115992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	627	Open in IMG/M
3300027952\|Ga0209889_1000825	All Organisms → cellular organisms → Bacteria	8868	Open in IMG/M
3300027952\|Ga0209889_1001883	All Organisms → cellular organisms → Bacteria	6098	Open in IMG/M
3300027954\|Ga0209859_1008703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2019	Open in IMG/M
3300028722\|Ga0307319_10297659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	533	Open in IMG/M
3300028744\|Ga0307318_10231668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	641	Open in IMG/M
3300028784\|Ga0307282_10430223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	640	Open in IMG/M
3300028787\|Ga0307323_10042251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1600	Open in IMG/M
3300028791\|Ga0307290_10120747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	958	Open in IMG/M
3300028803\|Ga0307281_10171196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	770	Open in IMG/M
3300028814\|Ga0307302_10001329	All Organisms → cellular organisms → Bacteria	10892	Open in IMG/M
3300028819\|Ga0307296_10342320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	816	Open in IMG/M
3300028819\|Ga0307296_10481186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	679	Open in IMG/M
3300028828\|Ga0307312_10962646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	565	Open in IMG/M
3300028884\|Ga0307308_10471118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	602	Open in IMG/M
3300030006\|Ga0299907_10923076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	647	Open in IMG/M
3300030620\|Ga0302046_10231182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1521	Open in IMG/M
3300030987\|Ga0308155_1008142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	807	Open in IMG/M
3300031226\|Ga0307497_10740231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	511	Open in IMG/M
3300031949\|Ga0214473_11180568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	794	Open in IMG/M
3300031965\|Ga0326597_12084760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	522	Open in IMG/M
3300033416\|Ga0316622_102577046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	585	Open in IMG/M
3300034113\|Ga0364937_129780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	534	Open in IMG/M
3300034176\|Ga0364931_0113187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	863	Open in IMG/M
3300034417\|Ga0364941_071052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	807	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.57%
Aquatic	Environmental → Aquatic	27.43%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.91%
Sediment	Environmental → Aquatic → Sediment	15.04%
Freshwater	Environmental → Aquatic → Freshwater	12.39%
Floodplain	Environmental → Terrestrial → Floodplain	2.65%

Habitat	Taxonomy	Distribution
Sand	Environmental → Terrestrial → Soil → Sand	32.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.04%
Sediment	Environmental → Aquatic → Freshwater → Sediment	9.73%
Loam	Environmental → Terrestrial → Soil → Loam	5.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	32.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.04%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	9.73%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	3.54%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.65%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	32.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.47%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	12.39%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	5.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.31%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	3.54%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009812	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027032	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027163	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027332	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027954	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1022065711	3300000956	Soil	LVERPWGYAECVPRPRRDLTTIEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELRVSRQAVADRLRRIRAN
Ga0066807_10000731	3300005161	Soil	MPEKRHLHSLEGRIGRLEVELQATRREWAALVEEAGQAAVARELGVSGQAIADRLRRIRANREGRSGRR*
Ga0066810_100040901	3300005169	Soil	KPVGDTPSPPEPRARHLVERSVKAALGRTPRRRYAECVPRPRRDLTMPEKRHLHSLEGRIGRLEVELQATRREWAALVEEAGQAAVARELGVSGQAIADRLRRIRANREGRSGRR*
Ga0070698_1015205181	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	RSTASPVASSLCRTRPIVAPSRDVPSRLPLVERPGYAEGVPRPRRDLTTVEKRHLHSLEGRMARLEAELQATRREWAELVEEAGQAAVARELRVSRQAVADRLRRIRANREGRSGRR*
Ga0070697_1018177832	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VYRDSLAGVPSREPLVERLGLSSGVPRPRRDLTTPEKRHLHSLEGRMGRLEAELHATRREWADLVEEAGQAAVARELAVSRQAVADRLLRIRANREGRSVRR*
Ga0079037_1007979861	3300006224	Freshwater Wetlands	RDLTTPEKRHLHSLEGRMARLEAELRATRMEWADLTEDAGQAAVARELGVSPQAVADRVRRIRANREGRNRRR*
Ga0074047_118755221	3300006576	Soil	DLTTAERRHLHSLEGRMARLEAELQATRREWAELVEEAGQAAVARELGVSRQAVADRLRRIRANREGRGGRR*
Ga0074049_130734051	3300006580	Soil	FAPSNRSGPRRWSVRSRIPLVERPGGYPKCVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGQSGPR*
Ga0105106_100094851	3300009078	Freshwater Sediment	EVPRPRRDLTAPEKRHLRSLEGRMARLEAELRATRSEWADLVEDAGQAAVARELGVSPQAVGDRLRRIRASREGGGGHR*
Ga0105098_103432751	3300009081	Freshwater Sediment	EKRHLHSLEGRIGRLEAELQATRREWAELVEEVGQGAVARELGVSRQAIADRVRRIRANREGRSGRR*
Ga0102851_102178862	3300009091	Freshwater Wetlands	VATTARRRGIPVERSDKASLGDTLRRYAEGVPRPRRDLTTPEKRHLRSLEGRMARLEAELQATRSEWADLVEDAGQAAVARELGVSPQAVADRLRRIRANREGRSGRR*
Ga0102851_126875401	3300009091	Freshwater Wetlands	LRRYAERVPRPRRDLTTPEKRHLHSLEGRMARLEAELRATRMEWADLTEDAGQAAVARELGVSPQAVADRVRRIRANREGRSHRR*
Ga0105092_104447871	3300009157	Freshwater Sediment	MTTAEKRHLHSLEGRIGRLEAELHATRREWAELVEEAGQAAVARELGVSRQAVADRLRRIRANREGRSGRR*
Ga0105100_100302131	3300009166	Freshwater Sediment	QRYREGLTRTGVRLNTGTAAARSLAPFQQGLPWYHALAYAREVPRPRRDLTAPEKRHLRSLEGRMARLEAELRATRSEWADLVEDAGQAAVARELGVSPQAVGDRLRRIRASREGGGGHR
Ga0105056_10351131	3300009801	Groundwater Sand	LVERSGYAEGVPRPRRDLTRPEKRHLHSLEGRMARLEAELQATRREWAELVEEAGQAAVARELRVSRQAVADRLRRIRANREGRSGRR*
Ga0105061_10051151	3300009807	Groundwater Sand	PRKSSVPSRMPLVERPGGYAECVPRSRRDLTTTEKRHLHSLEGRIGRLEAELHATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANRNGLSGRR*
Ga0105061_10484661	3300009807	Groundwater Sand	VPRPRRDLTTPEKRHLHSLEGRIARLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADR
Ga0105088_10120421	3300009810	Groundwater Sand	MPRPRRDLTTAEKRHLHSLEGRMARLEAELKATRREWAELVEEAGQAGVARELRVSRQAVADRLRRIRANREGRSGRR*
Ga0105084_10040441	3300009811	Groundwater Sand	EKRHLHSLEGRIGRLEAELHATRREWAELVEEAGQAAVARELGVSRQAVADRLRRIRANRKGRSGRR*
Ga0105067_10512551	3300009812	Groundwater Sand	LVERPGYAEGVPPPRRDLTTPEKRHLHSLEGRMARLEAELQATRREWAELVEEAGQAAVGRELRVSRQAVADRLRRIRANREGRSGRR*
Ga0105082_10029991	3300009814	Groundwater Sand	RMPLVERRGGYPECVPRPRRDLTTTEERHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR*
Ga0105070_10644101	3300009815	Groundwater Sand	GYAEGVPRPPRDLTTPEKRHLHSLEGRMARLEAELQATRREWAELVEETGQAAVARELRVSRQAVADRLRRIRANREGRGGRR*
Ga0105070_10883261	3300009815	Groundwater Sand	PRRDLTMAEKRHLHSLEGRIGRLEAELHATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR*
Ga0105076_10077804	3300009816	Groundwater Sand	MPLVERSGGGYAGCVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR*
Ga0105072_10037301	3300009818	Groundwater Sand	CVPRPRRDLTTTEKRHLHSLEGRIARLDAELQATRREWAELVEDAGQTAVARELGVSRQAIADRLRRIRANREGRSGRR*
Ga0105072_10341991	3300009818	Groundwater Sand	ECVPRPRRDLTTTEKRHLHSLEGRIVRLEVELEATRREWAELVEEAGQAAVARELGVSRQAVADRLRRIRANREGRSGRR*
Ga0105087_10538281	3300009819	Groundwater Sand	VPRPRRDLTTTEKRHLHSLEGRIVRLEVELEATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRGGRR*
Ga0105087_11253701	3300009819	Groundwater Sand	HRGTSRDVPSRLPLVERPGYAEGVPPPRRDLTTPEKRHLHSLEGRMARLEAELQATRREWAELVEETGQAAVARELRVSRQAVADRLRRIRANREGRGGRR*
Ga0105064_10052531	3300009821	Groundwater Sand	RRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR*
Ga0105066_10060944	3300009822	Groundwater Sand	VPRSRRDLTTTEKRHLHSLEGRIGRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR*
Ga0105058_10065343	3300009837	Groundwater Sand	MPRPRRDLTTAEKRHLHSLEGRMARLEAELKATRREWAELVEEAGQAAVARELRVSRQAVADRLRRIRANREGGSGRR*
Ga0105074_10017113	3300010029	Groundwater Sand	MPRPRRDLTTAEKRHLHSLEGRMARLEAELKATRREWAELVEEAGQAGVARELRVSRQAVADRLRRIRANREGGSGRR*
Ga0126306_100177603	3300010166	Serpentine Soil	VERSVKATLGRTPRRGYAECVPRPRRDLTTPEKRHLHSLEGRIGRLEAELQATRREWAELVEEAGQGAVARELGVSRQAIADRVRRIRANREGRSGRR*
Ga0137432_12878591	3300011439	Soil	RGGYAECVPRPRRDLTTIEKRHLHSLEGRIGRLEAELQATRREWAELVEEAGQAAVARELGVSRQAVADRLRRIRANREGRSGRR*
Ga0137374_111114511	3300012204	Vadose Zone Soil	TTTEKRHLHSLEGRIGRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRAYREGRSGRR*
Ga0137374_111977921	3300012204	Vadose Zone Soil	VPRPRRDLTTPEERHLHSLEGRMARLEAELKATRREWAELVEEAGQAAVARELRVSRQAVADRLRRIRANREGRSGRR*
Ga0137367_100987295	3300012353	Vadose Zone Soil	LPLVERSDYAEGVPRPRRDLTTAEKRHLHSLEGRMARLEAELQATRREWAELVEEAGQAGVARELRVSRQAVADRLRRIRANREGRSGRR*
Ga0137369_100667554	3300012355	Vadose Zone Soil	VPRPRRDLTTPEKRHLHSLEGRIARLEVELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRAYREGRSGRR*
Ga0137375_109057742	3300012360	Vadose Zone Soil	LVERPGYAEGVPRPRRDLTTPEKRHLHSLEGRIARLEVELQATRREWAELVGEAGQAAVARELRVSRQAVADRLRRIRANREGQSGRR*
Ga0137373_112224421	3300012532	Vadose Zone Soil	LTTTEKRHLHSLEGRIGRLEAELQATRREWAELVEEAGQAAVARELGVSRQAVADRLRRIRANR
Ga0184610_11418052	3300017997	Groundwater Sediment	TTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0184608_100280223	3300018028	Groundwater Sediment	MPLVERPRGYPECVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0184608_102756961	3300018028	Groundwater Sediment	RRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVAREFGVSRQAIADRLRRIRANREGRSGRR
Ga0184626_101559492	3300018053	Groundwater Sediment	LTTTEKQHLHSLEGRIRRLEAELQATRREWAELVEEAGQAAVAREFGVSRQAIADRLRRIRANREGRSGRR
Ga0184623_101478671	3300018056	Groundwater Sediment	TTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0184632_100445984	3300018075	Groundwater Sediment	RRDLTTPEKRHLHSLEGRMARLEAELQATRREWAELVEEAGQAAVARELRISRQAVADRLRRIRTSREGQSGRR
Ga0184632_100703703	3300018075	Groundwater Sediment	RDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGSGRR
Ga0184632_101454082	3300018075	Groundwater Sediment	PRPRRDLTTTEKRHLDSLEGRIARLEAELQATRREWAELVEEAGQAAVAREFGVSRQAIADRLRRIRANREGRSGRR
Ga0184609_100049216	3300018076	Groundwater Sediment	MPLVERPGGYPECVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVAREFGVSRQAIADRLRRIRANREGRSGRR
Ga0184609_102973031	3300018076	Groundwater Sediment	RRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0184612_100048556	3300018078	Groundwater Sediment	VPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGSGRR
Ga0184612_100914433	3300018078	Groundwater Sediment	GYPECVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVAREFGVSRQAIADRLRRIRANREGRSGRR
Ga0184612_105383331	3300018078	Groundwater Sediment	VPRPRRDLTTTEKRHLHSLEGRIARLEAELQATRREWAELVEEAGQAAVAREFGVSRQAIADRLRRIRANREGRSGRR
Ga0184625_102291782	3300018081	Groundwater Sediment	RPGGYAGCVPRPRRDLTTTEKRHLHSLEGRIARLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0190269_110703071	3300018465	Soil	LERSGYAEGVPRPRRDLTTPEKRHLHSLEGRMARLEAELQATRREWAELVEEAGQGAVARESGVSRQAVADRLRRIRANREGRSGRR
Ga0190270_110180471	3300018469	Soil	KALLHVIVQAHEIERSVKDALGRTPPRGYAGCVARPRRDLTTTEKRHLHSLEGRIGRLEAELHATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0190270_126357062	3300018469	Soil	GYAECVPRPRRDLTTTEKRHLHSLEGRIGRLEVELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREARSGRR
Ga0190274_100274327	3300018476	Soil	LVERPGGYAECVPRPRRDLTTTEKRHLHSLEGRIGRLEVELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0184648_13237321	3300019249	Groundwater Sediment	VPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANRERRGGRR
Ga0190267_103302881	3300019767	Soil	TLLQVIVRGPRRWSVRSRMPLVERPRGYPECVPRPRRDLTTTEKRHLHSLEGRIARLEAELQATRHEWAGLVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0193741_10945041	3300019884	Soil	HLVERSVKAALGRTPRRGYAGCVPRPRRDLTTTEKRHLHSLEGRIARLEVELQATRREWAELVEETGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0210378_100592261	3300021073	Groundwater Sediment	VPRPRRDLTTTEKRHLHSLEGRIARLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0210378_101597421	3300021073	Groundwater Sediment	MPLVERPRGYPECVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGR
Ga0210378_101692341	3300021073	Groundwater Sediment	PRPRRDLTTPEKRHLHSLESRMARLEAELQATRREWAELVEEAGQAAVARELRVSRQAVADRLRRIRANREGRSGRR
Ga0222625_16120201	3300022195	Groundwater Sediment	VPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0222625_17921231	3300022195	Groundwater Sediment	LVERSGYAEGVPRPRRDLTTPEKRHLHSLEGRMARLEAELQATRREWAELVEEAGQAAVARELRVTRQAVADRLRRIQASREGQSGRR
Ga0224452_10144103	3300022534	Groundwater Sediment	DLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0222623_103210491	3300022694	Groundwater Sediment	YAGCVPRPRRDLTTTEKRHLHSLEGRIARLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0209642_103537181	3300025167	Soil	PLSDEARRVTLAERTVKVTLGRTPQGYAEGVPRPRRDLTTPEKRHLHSLEGRMARLEAELQATRSEWADLVEEAGQAAVARELGVSPQAVADRLRRIRANREGRSGRR
Ga0209431_111216172	3300025313	Soil	PQGYAEGVPRPRRDLTTPEKRHLHSLEGRMARLEAELQATRSEWADLVEEAGQAAVARELGVSPQAVADRLRRIRANREGRSGRR
Ga0209640_110500951	3300025324	Soil	ERTVKVTLGRTPQGYAEGVPRPRRDLTTPEKRHLHSLEGRMARLEAELQATRSEWADLVEEAGQAAVARELGVSPQAVADRLRRIRANREGRSGRR
Ga0209341_107479281	3300025325	Soil	RRDLTTPEKRHLHSLEGRIARLEAELQATRSEWADLVEEAGQAAVARELGVSPQAIADRLRRIRANREGRSGRR
Ga0209896_10183883	3300027006	Groundwater Sand	TSTEKRHLHSLEGRIGRLEAELHATRREWAELVEEAGQAAVARELGVSRQAVADRLRRIRANRKGRSGRR
Ga0209877_10049591	3300027032	Groundwater Sand	HRGTSRDVPSRLPLVERPGYAEGVPPPRRDLTTPEKRHLHSLEGRMARLEAELQATRREWAELVEETGQAAVARELRVSRQAVADRLRRIRANREGRGGRR
Ga0209879_10191582	3300027056	Groundwater Sand	VPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRTGRR
Ga0209879_10377421	3300027056	Groundwater Sand	MPRPRRDLTTAEKRHLHSLEGRMARLEAELKATRREWAELVEEAGQAGVARELRVSRQAVADRLRRIRANREGRSGRR
Ga0209879_10663301	3300027056	Groundwater Sand	DRPRADVPSRLPLVERSGYAEGVPRPRRDLTRPEKRHLHSLEGRMARLEAELQATRREWAELVEEAGQAAVARELRVSRQAVADRLRRIRASREGQSGRR
Ga0209878_10012346	3300027163	Groundwater Sand	MERSVKAALGRTPRRGYAECVPRPRRNLTSTEKRHLHSLEGRIGRLEAELHATRREWAELVEEAGQAAVARELGVSRQAVADRLRRIRANRKGRSGRR
Ga0209878_10306241	3300027163	Groundwater Sand	LLERSGYAEGVPRPRRDLTTPEKRHLHSLEGRMARLEAELQATRREWAELVEEAGQAAVARELRVSRQAVADRLRRIRASREGQSGRR
Ga0209861_10353361	3300027332	Groundwater Sand	PRSRRDLTTTEKRHLHSLEGRIGRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0209842_10036611	3300027379	Groundwater Sand	VPRPRRDLTTTEKRHLHSLEGRIVRLEVELEATRREWAELVEEAGQAAVARELGVSRQAVADRLRRIRANREGRSGRR
Ga0209842_10888611	3300027379	Groundwater Sand	VPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELIEEAGQAAVARELGVSRQAIADRLR
Ga0209899_10605731	3300027490	Groundwater Sand	LVERPGYAEGVPRPPRDLTTPEKRHLHSLEGRMARLEAELQATRREWAELVEETGQAAVARELRVSRQAVADRLRRIRANREGRGGRR
Ga0209843_100008114	3300027511	Groundwater Sand	VERRGGYPECVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLR
Ga0209843_10902331	3300027511	Groundwater Sand	LVERPGYAEGVPPPRRDLTTPEKRHLHSLEGRMARLEAELQATRREWAELVEETGQAAVARELRVSRQAVADRLRRIRANREGRGGRR
Ga0209874_10309581	3300027577	Groundwater Sand	DRPRVDVPSRLPLLERSGYAEGVPRPRRDLTTPEKRHLHSLEGRMARLEAELQATRREWAELVEEAGQAAVARELRVSRQAVADRLRRIRASREGQSGRR
Ga0209874_10551691	3300027577	Groundwater Sand	VPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELIEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGPR
Ga0209874_11159921	3300027577	Groundwater Sand	LPLVERPGYAEGVPPPRRDLTTPEKRHLHSLEGRMARLEAELKATRREWAELVEEAGQAAAARELRVSRQAVADRLRRIRANREGRSGRR
Ga0209703_12008111	3300027723	Freshwater Sediment	RSLAPFQQGLPWYHALAYAREVPRPRRDLTAPEKRHLRSLEGRMARLEAELRATRSEWADLVEDAGQAAVARELGVSPQAVGDRLRRIRASREGGGGHR
Ga0209889_10008258	3300027952	Groundwater Sand	VERRGGYPECVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0209889_10018838	3300027952	Groundwater Sand	LVERSGGGYAGCVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVAREFGVSRQAIADRLRRI
Ga0209859_10087032	3300027954	Groundwater Sand	LVERPGYAEGVPPPRRDLTTPEKRHLHSLEGRMARLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0307319_102976591	3300028722	Soil	RMPLVERPRGYPECVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0307318_102316681	3300028744	Soil	ERSVKAALGRTPPRGYAECVPRPRRDLTTPEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0307282_104302231	3300028784	Soil	RSRMPLVERPRGYPECVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0307323_100422513	3300028787	Soil	LVERPGGYPECVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0307290_101207471	3300028791	Soil	LVERSGYAEGVPRPRRDLTTPEKRHLHSLEGRMARLEAELQATRREWAELVEEAGQAAVARELRVSRQAVADRLRRIQASREGQSGRR
Ga0307281_101711961	3300028803	Soil	MPLVERPEGYPECVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0307302_1000132912	3300028814	Soil	LVERPRGYPECVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0307296_103423202	3300028819	Soil	MPLVERPKGYPECVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRI
Ga0307296_104811861	3300028819	Soil	LVERSGYAEGVPRPRRDLTTPEKRHLHSLEGRMARLEAELQATRREWAELVEEAGQAAVARELGVSRQAVADCLRRIRANREGRSGRR
Ga0307312_109626461	3300028828	Soil	GRTPSGYAEVVPRPRRDLTTTEKRHLHSLEGRMARLEAELQATRREWAELVEDAGQAAVARERGVSRQAVADRLRRIRANREGLVGRR
Ga0307308_104711181	3300028884	Soil	SGYAEAMPRPRRDLTTAEKRHLHSLEGRMARLEAELQATRREWAELVEDAGQAAVARERGVSRQAVADRLRRIRANREGLVGRR
Ga0299907_109230761	3300030006	Soil	TRGYAECVPRPRRDLTTTEKRHLHSLEGRIARLEAELQATRREWAELVEEAGQAAVARELSVSRQAIADRLRRIRANREGRSGRR
Ga0302046_102311822	3300030620	Soil	VPRPRRDLTTTEKRHLHSLEGRIERLEVELQATRREWAELVEEAGQAAVARELGVSRQAVADRLRRIRANREGRSGRR
Ga0308155_10081422	3300030987	Soil	VRSRMPLVERPRGYPECVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELGVSRQAIADRLRRIRANREGRSGRR
Ga0307497_107402311	3300031226	Soil	VCSKQSFGPWKMERSVKGALGRTPQGYPECVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEESGQAAEARELGVSRQAIADRLRRIRANREGRSGRR
Ga0214473_111805682	3300031949	Soil	RSVKVALGRTPRSYAEGVPRPRRDLTTPEKRHLHSLEGRMARLEAELQATRREWADLVEEAGQAAVARELRVSRQAVADRLRRIRANREGQGGRR
Ga0326597_120847601	3300031965	Soil	VERSVKATLGRTPRRGYAECVPRPRRDLTTPEKRHLHSLEGRIGRLEAELQATRREWAELVEEVGQGAVARELGVSRQAIADRVRRIRANREGRSGRR
Ga0316622_1025770461	3300033416	Soil	SRWLHDVATTARRRGIPVERSDKASLGDTLRRYAEGVPRPRRDLTTPEKRHLRSLEGRMARLEAELQATRSEWADLVEDAGQAAVARELGVSPQAVADRLRRIRANREGRSGRR
Ga0364937_129780_325_534	3300034113	Sediment	TTEKRHLHSLEGRIGRLEAELQATRREWAELVEEAGQAAVARELGVSRQAVADRLRRIRANREGRSGRR
Ga0364931_0113187_3_263	3300034176	Sediment	PPGGYAECVPRPRRDLTTTEKRHLHSLEGRISRLEAELQATRREWAELVEEAGQAAVARELSVSRQAIADRLRRIRANREGRSGRR
Ga0364941_071052_3_281	3300034417	Sediment	RMPLVERPGGYPECVPRPRRDLTTTEKRHLHSLEGRIARLEAELQATRHEWAELVEEAGQGAVARELGVSRQAIADRLRRIRANREGRSGRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082878

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences