Metagenome Family F082861

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F082861
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	69 residues
Representative Sequence	MIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEATK
Number of Associated Samples	60
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	43.36 %
% of genes near scaffold ends (potentially truncated)	29.20 %
% of genes from short scaffolds (< 2000 bps)	76.99 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (91.150 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment (19.469 % of family members)
Environment Ontology (ENVO)	Unclassified (58.407 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.442 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 16.90% β-sheet: 32.39% Coil/Unstructured: 50.70%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13884	Peptidase_S74	38.05
PF00176	SNF2-rel_dom	0.88
PF07750	GcrA	0.88
PF00589	Phage_integrase	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG5352	Uncharacterized conserved protein	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.04 %
Unclassified	root	N/A	7.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.15 %
Unclassified	root	N/A	7.96 %
Viruses	superkingdom	All Organisms → Viruses	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.15 %
Unclassified	root	N/A	7.96 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	0.88 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	82.30 %
Unclassified	root	N/A	7.96 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.88 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	73.45 %
Unclassified	root	N/A	7.96 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	0.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	68.14 %
Unclassified	root	N/A	7.96 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	60.18 %
Unclassified	root	N/A	7.96 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.77 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.88 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	58.41 %
Unclassified	root	N/A	7.96 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.77 %
Shinella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella	0.88 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	12.39 %
Unclassified	root	N/A	7.96 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	7.08 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.77 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.77 %
Shinella pollutisoli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella → Shinella pollutisoli	0.88 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.96 %
Bradyrhizobium sp. CCGUVB1N3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	7.08 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	7.08 %
Bradyrhizobium sp. BRP22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BRP22	5.31 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.77 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.77 %
Shinella pollutisoli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella → Shinella pollutisoli	0.88 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.88 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.88 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004114\|Ga0062593_101736104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300005169\|Ga0066810_10155455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	549	Open in IMG/M
3300005290\|Ga0065712_10102886	All Organisms → cellular organisms → Bacteria → Proteobacteria	1998	Open in IMG/M
3300005290\|Ga0065712_10238397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	991	Open in IMG/M
3300005355\|Ga0070671_100121316	All Organisms → cellular organisms → Bacteria → Proteobacteria	2200	Open in IMG/M
3300005356\|Ga0070674_100083939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2283	Open in IMG/M
3300005364\|Ga0070673_100951785	All Organisms → cellular organisms → Bacteria → Proteobacteria	798	Open in IMG/M
3300005456\|Ga0070678_100001890	All Organisms → cellular organisms → Bacteria → Proteobacteria	11301	Open in IMG/M
3300005456\|Ga0070678_100017087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4661	Open in IMG/M
3300005456\|Ga0070678_100806322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	853	Open in IMG/M
3300005456\|Ga0070678_100823619	All Organisms → cellular organisms → Bacteria → Proteobacteria	844	Open in IMG/M
3300005459\|Ga0068867_100096771	All Organisms → cellular organisms → Bacteria → Proteobacteria	2248	Open in IMG/M
3300005618\|Ga0068864_100539664	All Organisms → cellular organisms → Bacteria → Proteobacteria	1126	Open in IMG/M
3300005618\|Ga0068864_102097556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	572	Open in IMG/M
3300005841\|Ga0068863_100584300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1105	Open in IMG/M
3300006237\|Ga0097621_100074769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	2807	Open in IMG/M
3300006237\|Ga0097621_100610323	All Organisms → cellular organisms → Bacteria → Proteobacteria	998	Open in IMG/M
3300006237\|Ga0097621_100676272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	949	Open in IMG/M
3300006358\|Ga0068871_100153345	All Organisms → cellular organisms → Bacteria → Proteobacteria	1966	Open in IMG/M
3300006358\|Ga0068871_100207015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1696	Open in IMG/M
3300006358\|Ga0068871_101109611	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300006881\|Ga0068865_100026600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3816	Open in IMG/M
3300009148\|Ga0105243_10877841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	890	Open in IMG/M
3300009168\|Ga0105104_10001571	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	17113	Open in IMG/M
3300009168\|Ga0105104_10026317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3321	Open in IMG/M
3300009168\|Ga0105104_10028635	All Organisms → cellular organisms → Bacteria	3153	Open in IMG/M
3300009168\|Ga0105104_10033739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2857	Open in IMG/M
3300009168\|Ga0105104_10086696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Shinella → Shinella pollutisoli	1686	Open in IMG/M
3300009176\|Ga0105242_10026171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4623	Open in IMG/M
3300009176\|Ga0105242_10910756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	880	Open in IMG/M
3300009176\|Ga0105242_12531186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	562	Open in IMG/M
3300009177\|Ga0105248_11997439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	659	Open in IMG/M
3300010401\|Ga0134121_10428845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1202	Open in IMG/M
3300011423\|Ga0137436_1097218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	775	Open in IMG/M
3300011423\|Ga0137436_1135892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	657	Open in IMG/M
3300011438\|Ga0137451_1006143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3535	Open in IMG/M
3300011438\|Ga0137451_1012720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2425	Open in IMG/M
3300011438\|Ga0137451_1019441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1961	Open in IMG/M
3300011438\|Ga0137451_1028438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1617	Open in IMG/M
3300011438\|Ga0137451_1044353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1301	Open in IMG/M
3300011438\|Ga0137451_1068883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1051	Open in IMG/M
3300011438\|Ga0137451_1097163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	896	Open in IMG/M
3300011438\|Ga0137451_1225579	Not Available	592	Open in IMG/M
3300012892\|Ga0157294_10088044	Not Available	777	Open in IMG/M
3300012892\|Ga0157294_10123056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	692	Open in IMG/M
3300012903\|Ga0157289_10054417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1026	Open in IMG/M
3300012916\|Ga0157310_10160517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	785	Open in IMG/M
3300012984\|Ga0164309_10533791	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300013296\|Ga0157374_11298638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	750	Open in IMG/M
3300013297\|Ga0157378_10819344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	957	Open in IMG/M
3300013297\|Ga0157378_11048932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	851	Open in IMG/M
3300013297\|Ga0157378_11978724	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	632	Open in IMG/M
3300013308\|Ga0157375_10310514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BRP22	1741	Open in IMG/M
3300013308\|Ga0157375_10594684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1266	Open in IMG/M
3300013308\|Ga0157375_12224257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	653	Open in IMG/M
3300014326\|Ga0157380_10099106	Not Available	2423	Open in IMG/M
3300014326\|Ga0157380_12612451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	571	Open in IMG/M
3300014968\|Ga0157379_10933933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	824	Open in IMG/M
3300014969\|Ga0157376_11137791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	807	Open in IMG/M
3300015200\|Ga0173480_10746794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	619	Open in IMG/M
3300018031\|Ga0184634_10000021	All Organisms → cellular organisms → Bacteria	37568	Open in IMG/M
3300018031\|Ga0184634_10000751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8840	Open in IMG/M
3300018031\|Ga0184634_10029382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2165	Open in IMG/M
3300018031\|Ga0184634_10074424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1449	Open in IMG/M
3300018031\|Ga0184634_10090660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BRP22	1324	Open in IMG/M
3300018031\|Ga0184634_10093400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1306	Open in IMG/M
3300018031\|Ga0184634_10116943	Not Available	1176	Open in IMG/M
3300018031\|Ga0184634_10159327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1015	Open in IMG/M
3300018031\|Ga0184634_10293998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	746	Open in IMG/M
3300018031\|Ga0184634_10304767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	731	Open in IMG/M
3300018067\|Ga0184611_1186154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	738	Open in IMG/M
3300018067\|Ga0184611_1280164	Not Available	583	Open in IMG/M
3300018072\|Ga0184635_10062333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1449	Open in IMG/M
3300018073\|Ga0184624_10162168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	987	Open in IMG/M
3300018073\|Ga0184624_10282097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BRP22	745	Open in IMG/M
3300018073\|Ga0184624_10543116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	502	Open in IMG/M
3300018077\|Ga0184633_10441109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	645	Open in IMG/M
3300018081\|Ga0184625_10201333	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300018081\|Ga0184625_10222578	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300018081\|Ga0184625_10270793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	889	Open in IMG/M
3300018083\|Ga0184628_10438930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	680	Open in IMG/M
3300018083\|Ga0184628_10609599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	552	Open in IMG/M
3300020000\|Ga0193692_1046404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	991	Open in IMG/M
3300020016\|Ga0193696_1002708	All Organisms → cellular organisms → Bacteria	5196	Open in IMG/M
3300021082\|Ga0210380_10587321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	511	Open in IMG/M
3300022911\|Ga0247783_1160886	Not Available	633	Open in IMG/M
3300025315\|Ga0207697_10214893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	848	Open in IMG/M
3300025893\|Ga0207682_10371740	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300025899\|Ga0207642_10037988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BRP22	2079	Open in IMG/M
3300025899\|Ga0207642_10040207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2039	Open in IMG/M
3300025899\|Ga0207642_10521597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BRP22	730	Open in IMG/M
3300025908\|Ga0207643_10164287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	1337	Open in IMG/M
3300025930\|Ga0207701_10072931	Not Available	3115	Open in IMG/M
3300025930\|Ga0207701_10274477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGUVB1N3	1468	Open in IMG/M
3300025934\|Ga0207686_10181552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1493	Open in IMG/M
3300025934\|Ga0207686_10648978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	835	Open in IMG/M
3300025935\|Ga0207709_10029535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	3182	Open in IMG/M
3300025936\|Ga0207670_10091847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2148	Open in IMG/M
3300025936\|Ga0207670_11168140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	651	Open in IMG/M
3300025938\|Ga0207704_10771088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	801	Open in IMG/M
3300025960\|Ga0207651_10661256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	918	Open in IMG/M
3300026088\|Ga0207641_10642144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1042	Open in IMG/M
3300026089\|Ga0207648_10164869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1958	Open in IMG/M
3300026089\|Ga0207648_10211072	Not Available	1724	Open in IMG/M
3300026095\|Ga0207676_10346588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1372	Open in IMG/M
3300026095\|Ga0207676_10406010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1274	Open in IMG/M
3300026121\|Ga0207683_10450658	All Organisms → cellular organisms → Bacteria → Proteobacteria	1186	Open in IMG/M
3300027743\|Ga0209593_10000132	All Organisms → cellular organisms → Bacteria	39197	Open in IMG/M
3300027743\|Ga0209593_10028046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2241	Open in IMG/M
3300028802\|Ga0307503_10227499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	899	Open in IMG/M
3300028802\|Ga0307503_10341750	Not Available	764	Open in IMG/M
3300028803\|Ga0307281_10304092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BRP22	596	Open in IMG/M
3300031170\|Ga0307498_10445512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	519	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.10%
Host-Associated	Host-Associated	46.90%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	46.90%
Aquatic	Environmental → Aquatic	35.40%
Terrestrial	Environmental → Terrestrial	17.70%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Sediment	28.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.24%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.35%
Soil	Environmental → Terrestrial → Soil	16.81%
Freshwater	Environmental → Aquatic → Freshwater	7.08%
Roots	Host-Associated → Plants → Roots	5.31%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	28.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	15.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.16%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.08%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	5.31%
Soil	Host-Associated → Plants → Rhizoplane → Soil	4.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.42%
Loam	Environmental → Terrestrial → Soil → Loam	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.77%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	28.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.39%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.08%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	5.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	4.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	19.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.62%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	8.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	7.08%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	6.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	5.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	4.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.77%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022911	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L064-202C-5	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062593_1017361042	3300004114	Soil	MIFLVLIVLHSGSGTPLELNPALVTNLRNPEASIGAFSPNVKCQINMADGKYVTVQETCAEVRKLMEQAK*
Ga0066810_101554552	3300005169	Soil	MIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMETTK*
Ga0065712_101028864	3300005290	Miscanthus Rhizosphere	VIPMLVLIVLHSGSGTPLELNPAMVTNLRNPEPGNSGAFSKNVKCQINMTDGKYVTVIETCSEVRKLMEATK*
Ga0065712_102383971	3300005290	Miscanthus Rhizosphere	GSGTPLDLNTAMITNLRNPEPANSGVFAKGVQCQVNMVDGKFVTVKETCAEVRKLMETTK
Ga0070671_1001213162	3300005355	Switchgrass Rhizosphere	MLVLIVLHSGSGTPLELNPAMVTNLRNPEPGNSGAFSKNVKCQINMTDGKYVTVIETCSEVRKLMEATK*
Ga0070674_1000839394	3300005356	Miscanthus Rhizosphere	MIPMLVLIVLHSGSGTPLELNPAMVTNLRNPEPGNSGAFSKNVKCQINMTDGKYVTVIETCSEVRKLMEATK*
Ga0070673_1009517852	3300005364	Switchgrass Rhizosphere	MIPLLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEATK*
Ga0070678_10000189012	3300005456	Miscanthus Rhizosphere	MIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRRLMEATK*
Ga0070678_1000170875	3300005456	Miscanthus Rhizosphere	MIPMLVLIVLHSGSGTPLELNPALVTNLRNPEAGIGAFSPNVKCQINMADGKYVTVKETCSEVRKLMEATK*
Ga0070678_1008063222	3300005456	Miscanthus Rhizosphere	MIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPSVKCQVNMLDGKYVTVKETCAEVRRLMEATK*
Ga0070678_1008236193	3300005456	Miscanthus Rhizosphere	VIPVLVLIILHSGTGTPIELNTATVTHLRNPEPSNPAFTPNVRCQVNMTDGKYVTVLEKCEEVRRLMEATK*
Ga0068867_1000967714	3300005459	Miscanthus Rhizosphere	MIMLVLIVLHSGSGTPLELNPAMVTNLRNPEAGIGAFSPNVKCQINMTDGKYVTVKETCAEVRKLMEATK*
Ga0068864_1005396642	3300005618	Switchgrass Rhizosphere	MIPMLVMIVLHSGSGIALDLNPQAITNLRNPDPAIGAFSPNVKCQVNMLDGKYIMVKETCEEVKKLMETTK*
Ga0068864_1020975562	3300005618	Switchgrass Rhizosphere	MIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAE
Ga0068863_1005843002	3300005841	Switchgrass Rhizosphere	VIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEAK*
Ga0097621_1000747693	3300006237	Miscanthus Rhizosphere	MLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPSVKCQVNMLDGKYVTVKETCAEVRRLMEATK*
Ga0097621_1006103232	3300006237	Miscanthus Rhizosphere	MIPMLVLIVLHSGSGTPLELNPAMVTNLRNPEAGIGAFSPNVKCQINMTDGKYVTVKETCAEVRKLMEATK*
Ga0097621_1006762721	3300006237	Miscanthus Rhizosphere	LVMIVLHSGSGIALDLNPQTITNLRNPDPAIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEATK*
Ga0068871_1001533454	3300006358	Miscanthus Rhizosphere	MIPVLVMIVLHSGSGIALDLNPQTITNLRNPDPAIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEATK*
Ga0068871_1002070152	3300006358	Miscanthus Rhizosphere	VIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEATK*
Ga0068871_1011096113	3300006358	Miscanthus Rhizosphere	MIFLVLIVLHSGSGTPLELNPAMVTNLRNPEAGIGAFSPNVKCQINMTDGKYVTVKETCAEVRKLMEATK*
Ga0068865_10002660012	3300006881	Miscanthus Rhizosphere	SGIALDLNPQTITNLRNPDPSIGAFSPSVKCQVNMLDGKYVTVKETCAEVRRLMEATK*
Ga0105243_108778412	3300009148	Miscanthus Rhizosphere	MIPMLVLIVLHSGSGTPLELNPAMVTNLRNPEAGIGAFSPNVKCQVNLADGKYVTVKETCAEVRKLMEATK*
Ga0105104_1000157115	3300009168	Freshwater Sediment	MIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRRLMETTK*
Ga0105104_100263172	3300009168	Freshwater Sediment	MLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRRLMEATK*
Ga0105104_100286352	3300009168	Freshwater Sediment	MLVMIVLHSGGGTPMDVNTSTITNLRNPEAGIGAFSPNVKCQINMVDGKYVTVKETCAEVRKLMEATK*
Ga0105104_100337392	3300009168	Freshwater Sediment	MIMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMETTK*
Ga0105104_100866962	3300009168	Freshwater Sediment	MIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEATK*
Ga0105242_100261715	3300009176	Miscanthus Rhizosphere	VIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPSVKCQVNMLDGKYVTVKETCAEVRRLMEATK*
Ga0105242_109107564	3300009176	Miscanthus Rhizosphere	MLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQINMLDGKYVTVKETCAEVRKLMEATK*
Ga0105242_125311862	3300009176	Miscanthus Rhizosphere	VIPVLVLIILHSGTGTPIELNTATVTHLRNPEPSNPAFTPNVRCQVNMTDGKYVTVLEKCEEVRRLMEAIK*
Ga0105248_119974392	3300009177	Switchgrass Rhizosphere	VIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPSVKCQVNMLDGKYVTVKETCAEVR
Ga0134121_104288451	3300010401	Terrestrial Soil	VIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRRLMEATK*
Ga0137436_10972183	3300011423	Soil	GRAAAVAARLSEQDAEMIPLLVMIILHSGSGTPIDLNTEKITNMRNPEPGNKNFSDNVKCQVNMVDGKYVTVKETCAEVRRLMEATK*
Ga0137436_11358922	3300011423	Soil	MLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEATK*
Ga0137451_10061432	3300011438	Soil	VIPVLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRRLMEATK*
Ga0137451_10127202	3300011438	Soil	MIMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRRLMEATK*
Ga0137451_10194411	3300011438	Soil	PIEGLGARASGPGSQGQAIVIFLVLIVLHSGSGIPLDLNPATITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEQAKQ*
Ga0137451_10284382	3300011438	Soil	MIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPSVKCQVNMLDGKYVTVRETCAEVRRLMEATK*
Ga0137451_10443532	3300011438	Soil	MIMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVQETCAEVRRLMETTK*
Ga0137451_10688832	3300011438	Soil	MIMLVLIVLHSGSGTPLELNPALVTNLRNPEAGIGAFSPNVKCQINMADGKYVTVKETCAEVRKLMEATK*
Ga0137451_10971632	3300011438	Soil	MIMLVLIVLHSGSGTPLELNPAMVTNLRNPEASIGAFSPNVKCQINMADGKYVTVKETCAEVRKLMEQAK*
Ga0137451_12255792	3300011438	Soil	AGMILLVLIILHSGSGTPIELNPAAITNLRNPEPSNPAFTPNVRCQVNMVDGKYVTVLEKCEEVRKLIEGRPP*
Ga0157294_100880441	3300012892	Soil	MIMLVLIVLHSGSGTPLELNPALVTNLRNPEASIGAFSPNVKCQINMADGKYVTVQETCAEVRKLMEQAK*
Ga0157294_101230562	3300012892	Soil	VIPVLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEATK*
Ga0157289_100544172	3300012903	Soil	MLMLVLIVLHSGSGTPLELNPALVTNLRNPEAGIGAFSPNVKCQINMADGKYVTVKETCAEVRKLMEATK*
Ga0157310_101605171	3300012916	Soil	FQRQDAKAVIPVLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEATK*
Ga0164309_105337912	3300012984	Soil	MILLVMIILHSGSGTPLDLNTDAITNLRNPEPSNNAFTPNVKCQVNMTDGKYVTVQETCA
Ga0157374_112986383	3300013296	Miscanthus Rhizosphere	MIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEATK*
Ga0157378_108193442	3300013297	Miscanthus Rhizosphere	VIPVLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRRLMETTK*
Ga0157378_110489322	3300013297	Miscanthus Rhizosphere	VIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQINMLDGKYVTVKETCEQVRKLMETTK*
Ga0157378_119787241	3300013297	Miscanthus Rhizosphere	MIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKE
Ga0157375_103105144	3300013308	Miscanthus Rhizosphere	MIPLLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRRLMEATK*
Ga0157375_105946841	3300013308	Miscanthus Rhizosphere	TVAARLPEQDAQAVIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSSNVKCQVNMLDGKYVTVRETCAEVRKLMEATK*
Ga0157375_122242572	3300013308	Miscanthus Rhizosphere	MLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEA
Ga0157380_100991061	3300014326	Switchgrass Rhizosphere	MTRRGNTVLPLFVMIILHSGTGTVIDLNTETITNLRNPEPNNPAFTSNVKCMINMTDGKFVTVM
Ga0157380_126124511	3300014326	Switchgrass Rhizosphere	GSGIALDLNPQTITNLRNPDPSIGAFSPSVKCQVNMLDGKYVTVKETCAEVRRLMEATK*
Ga0157379_109339334	3300014968	Switchgrass Rhizosphere	GTPLDLNTAMITNLRNPEPANSGVFAKGVQCQVNLADGKFVTVKETCAEVRKLMETTK*
Ga0157376_111377911	3300014969	Miscanthus Rhizosphere	MLVMIVLHSGSGIALDLNPQTITNLRNPEAGIGAFSPNVKCQINMVDGKYVTVKETCAEVRKLMEATK*
Ga0173480_107467941	3300015200	Soil	QDAKAVIPVLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEATK*
Ga0184634_1000002151	3300018031	Groundwater Sediment	MILLVMIILHSATGTPIDLNTATITNLRNPEPTNNAFAKGVQCQVNMTDGKYVTVKETCAEVRKLMETTK
Ga0184634_100007514	3300018031	Groundwater Sediment	MIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEATK
Ga0184634_100293823	3300018031	Groundwater Sediment	MIMLVLIVLHSGSGTPLELNPAMVTNLRNPEASIGAFSPNVKCQINMADGKYVTVKETCAEVRKLMEQAK
Ga0184634_100744242	3300018031	Groundwater Sediment	VIFLVLIVLHSGSGIALDLNPATITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEQAKQ
Ga0184634_100906602	3300018031	Groundwater Sediment	MIMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRRLMEATK
Ga0184634_100934004	3300018031	Groundwater Sediment	MLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEATK
Ga0184634_101169431	3300018031	Groundwater Sediment	MIPMLVLIVLHSGSGTPLELNPAMVTNLRNPEAGIGAFSPNVKCQINMVDGKYVTVKETCAEVRKLMEATK
Ga0184634_101593271	3300018031	Groundwater Sediment	MIMLVLIVLHSGSGTPLELNPALVTNLRNPEAGIGAFSPNVKCQINMADGKYVTVKETCAEVRKLMEATK
Ga0184634_102939982	3300018031	Groundwater Sediment	MIPWLTMIILHSGSGTPLDLNTQAITNLRNPEPSIGAFSPQVKCQVNMLDGKYVTVKETCAEVRKLMEQAK
Ga0184634_103047671	3300018031	Groundwater Sediment	MIMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVQETC
Ga0184611_11861542	3300018067	Groundwater Sediment	MIPMLVMIVLHSGGGTPMDVNTSTITNLRNPEAGIGAFSPNVKCQINMVDGKYVTVKETCAEVRKLMEATK
Ga0184611_12801643	3300018067	Groundwater Sediment	VIFLVLIVLHSGSGIALDLNPATITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVR
Ga0184635_100623332	3300018072	Groundwater Sediment	MIPMLVLIVLHSGSGTPLELNPAMVTNLRNPEAGIGAFSPNVKCQVNLADGKYVTVKETCAEVRKLMEATK
Ga0184624_101621682	3300018073	Groundwater Sediment	MIMLVLIILHSGSGTPMDVNTSTITNLRNPEAGIGAFSPNVKCQINMVDGKYVTVKETCAEVRKLMEATK
Ga0184624_102820972	3300018073	Groundwater Sediment	MIMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEATK
Ga0184624_105431163	3300018073	Groundwater Sediment	ILHSATGTPIDLNTATITNLRNPEPTNNAFAKGVQCQVNMTDGKYVTVKETCAEVRKLMETTK
Ga0184633_104411094	3300018077	Groundwater Sediment	VIPMLVMIVLHSGGGTPMDVNTSTITNLRNPEAGIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEATK
Ga0184625_102013333	3300018081	Groundwater Sediment	VIFLVLIVLHSGPGIALDLNPATITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEQAKQ
Ga0184625_102225782	3300018081	Groundwater Sediment	MLVMIVLHSGGGTPMDVNTSTITNLRNPEAGIGAFSPNVKCQINMVDGKYVTVKETCAEVRKLMEATK
Ga0184625_102707935	3300018081	Groundwater Sediment	GIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVQETCAEVRRLMETTK
Ga0184628_104389301	3300018083	Groundwater Sediment	MLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRK
Ga0184628_106095992	3300018083	Groundwater Sediment	MIPWLTMIILHSGSGTALDLNTAMITNLRNPEPGNSGLFAPGVKCQVNLADGKYVTVKETCAEVRKLMEATK
Ga0193692_10464042	3300020000	Soil	MLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRRLMEATK
Ga0193696_100270812	3300020016	Soil	MILLVLIILHSGSGTPIELNPAAITNLRNPEPSNPAFTPNVRCQVNMVDGKYVTVLEKCEEVRKLIEGRPP
Ga0210380_105873212	3300021082	Groundwater Sediment	MLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAE
Ga0247783_11608863	3300022911	Plant Litter	GSGTPLDLNTAMITNLRNPEASIGAFSPNVKCQINMADGKYVTVQETCAEVRKLMEQAK
Ga0207697_102148932	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPSVKCQVNMLDGKYVTVKETCAEVRRLMEATK
Ga0207682_103717401	3300025893	Miscanthus Rhizosphere	MIPMLVLIVLHSGSGTPLELNPALVTNLRNPEAGIGAFSPNVKCQINMADGKYVTVKETCSEVRKLMEATK
Ga0207642_100379885	3300025899	Miscanthus Rhizosphere	MIMLVLIVLHSGSGTPLELNPAMVTNLRNPEAGIGAFSPNVKCQINMTDGKYVTVKETCAEVRKLMEATK
Ga0207642_100402073	3300025899	Miscanthus Rhizosphere	MLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPSVKCQVNMLDGKYVTVKETCAEVRRLMEATK
Ga0207642_105215972	3300025899	Miscanthus Rhizosphere	MIPMLVLIVLHSGSGTPLELNPAMVTNLRNPEPGNSGAFSKNVKCQINMTDGKYVTVIETCSEVRKLMEATK
Ga0207643_101642872	3300025908	Miscanthus Rhizosphere	VIPMLVLIVLHSGSGTPLELNPAMVTNLRNPEPGNSGAFSKNVKCQINMTDGKYVTVIETCSEVRKLMEATK
Ga0207701_100729313	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MIMLVLIVLHSGSGTPLELNPALVTNLRNPEASIGAFSPNVKCQINMADGKYVTVQETCAEVRKLMEQAK
Ga0207701_102744774	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MLAMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQINMLDGKYVTVKETCAEVRKLMEATK
Ga0207686_101815521	3300025934	Miscanthus Rhizosphere	IVLHSGSGTPLELNPAMVTNLRNPEAGIGAFSPNVKCQVNLADGKYVTVKETCAEVRKLMEATK
Ga0207686_106489784	3300025934	Miscanthus Rhizosphere	NGSHRGAGSRAVIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQINMLDGKYVTVKETCAEVRKLMEATK
Ga0207709_100295352	3300025935	Miscanthus Rhizosphere	MLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQINMLDGKYVTVKETCEQVRKLMETTK
Ga0207670_100918471	3300025936	Switchgrass Rhizosphere	MLVLIVLHSGSGTPLELNPAMVTNLRNPEPGNSGAFSKNVKCQINMTDGKYVTVIETCSEVRKLMEATK
Ga0207670_111681402	3300025936	Switchgrass Rhizosphere	VIPMLVMIVLHSGGGTPMDVNTSTITNLRNPEAGIGAFSPNVKCQINMVDGKYVTVKETCAEVRKLMEATK
Ga0207704_107710881	3300025938	Miscanthus Rhizosphere	VIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQINMLDGKYVTVKETCAEVRKLMEATK
Ga0207651_106612562	3300025960	Switchgrass Rhizosphere	MIPLLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQINMVDGKYVTVKETCAEVRKLMEATK
Ga0207641_106421442	3300026088	Switchgrass Rhizosphere	MLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEAK
Ga0207648_101648694	3300026089	Miscanthus Rhizosphere	MLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQINMLDGKYVTVKETCAEVRKLMEATK
Ga0207648_102110722	3300026089	Miscanthus Rhizosphere	MIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRRLMEATK
Ga0207676_103465885	3300026095	Switchgrass Rhizosphere	SGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCEQVRKLMETTK
Ga0207676_104060102	3300026095	Switchgrass Rhizosphere	MIPMLVMIVLHSGSGIALDLNPQAITNLRNPDPAIGAFSPNVKCQVNMLDGKYIMVKETCEEVKKLMETTK
Ga0207683_104506584	3300026121	Miscanthus Rhizosphere	VIPVLVLIILHSGTGTPIELNTATVTHLRNPEPSNPAFTPNVRCQVNMTDGKYVTVLEKCEEVRRLMEATK
Ga0209593_1000013227	3300027743	Freshwater Sediment	MIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRRLMETTK
Ga0209593_100280464	3300027743	Freshwater Sediment	MIMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMETTK
Ga0307503_102274995	3300028802	Soil	SGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEATK
Ga0307503_103417504	3300028802	Soil	GSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEATK
Ga0307281_103040921	3300028803	Soil	MIPMLVMIVLHSGSGIALDLNPQTITNLRNPDPSIGAFSPNVKCQVNMLDGKYVTVKETCAEVRKLMEQAK
Ga0307498_104455123	3300031170	Soil	MIILHSGAGVEIQLQTDSVTNLRNPEPHNQLFTGNVKCVVNMSDGKYVTVKETCAEVRRLMEVNR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082861

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences