Metagenome / Metatranscriptome Family F082848

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082848
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	45 residues
Representative Sequence	MKAYKAAQAKDQDKMIDLSETLSAACAGCHRKWRDRRTPANRCK
Number of Associated Samples	99
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.65 %
% of genes near scaffold ends (potentially truncated)	94.69 %
% of genes from short scaffolds (< 2000 bps)	92.92 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.487 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.929 % of family members)
Environment Ontology (ENVO)	Unclassified (43.363 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.673 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.28% β-sheet: 0.00% Coil/Unstructured: 59.72%
Feature Viewer

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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13531	SBP_bac_11	11.50
PF00069	Pkinase	6.19
PF01322	Cytochrom_C_2	4.42
PF02230	Abhydrolase_2	3.54
PF07690	MFS_1	3.54
PF00753	Lactamase_B	2.65
PF02518	HATPase_c	1.77
PF07366	SnoaL	1.77
PF13676	TIR_2	1.77
PF02687	FtsX	1.77
PF04389	Peptidase_M28	1.77
PF13620	CarboxypepD_reg	1.77
PF13349	DUF4097	1.77
PF10518	TAT_signal	0.88
PF00176	SNF2-rel_dom	0.88
PF13442	Cytochrome_CBB3	0.88
PF13601	HTH_34	0.88
PF14200	RicinB_lectin_2	0.88
PF13290	CHB_HEX_C_1	0.88
PF12704	MacB_PCD	0.88
PF02225	PA	0.88
PF01769	MgtE	0.88
PF03102	NeuB	0.88
PF05163	DinB	0.88
PF03544	TonB_C	0.88
PF14833	NAD_binding_11	0.88
PF13561	adh_short_C2	0.88
PF00496	SBP_bac_5	0.88
PF11066	DUF2867	0.88
PF01925	TauE	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	24.78
COG3909	Cytochrome c556	Energy production and conversion [C]	4.42
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.88
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.88
COG1824	Permease, similar to cation transporters	Inorganic ion transport and metabolism [P]	0.88
COG2089	Sialic acid synthase SpsE, contains C-terminal SAF domain	Cell wall/membrane/envelope biogenesis [M]	0.88
COG2239	Mg/Co/Ni transporter MgtE (contains CBS domain)	Inorganic ion transport and metabolism [P]	0.88
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.49 %
Unclassified	root	N/A	34.51 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.49 %
Unclassified	root	N/A	34.51 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.49 %
Unclassified	root	N/A	34.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.51 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.42 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.54 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.51 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.42 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.54 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.65 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.77 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.88 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.42 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.77 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.77 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.88 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.88 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.42 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.77 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.77 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.88 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.88 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.42 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.77 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.77 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.88 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.88 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.88 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.42 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1.77 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.77 %
Limnoglobus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Limnoglobus	0.88 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.88 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.88 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.42 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	1.77 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.77 %
Limnoglobus roseus	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Limnoglobus → Limnoglobus roseus	0.88 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.88 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.88 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_105578153	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1914	Open in IMG/M
3300000890\|JGI11643J12802_10619118	Not Available	569	Open in IMG/M
3300004463\|Ga0063356_105082038	Not Available	565	Open in IMG/M
3300004633\|Ga0066395_10289251	All Organisms → cellular organisms → Bacteria → Proteobacteria	892	Open in IMG/M
3300005169\|Ga0066810_10173032	Not Available	529	Open in IMG/M
3300005334\|Ga0068869_101527429	Not Available	593	Open in IMG/M
3300005347\|Ga0070668_101873974	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300005364\|Ga0070673_101110790	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300005367\|Ga0070667_100667960	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300005457\|Ga0070662_100163396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1743	Open in IMG/M
3300005543\|Ga0070672_101943610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300005544\|Ga0070686_101321599	Not Available	603	Open in IMG/M
3300005718\|Ga0068866_10304662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	996	Open in IMG/M
3300005764\|Ga0066903_106274466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300005764\|Ga0066903_108791350	Not Available	513	Open in IMG/M
3300005840\|Ga0068870_11158225	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005843\|Ga0068860_100211362	All Organisms → cellular organisms → Bacteria	1882	Open in IMG/M
3300005844\|Ga0068862_101459333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300006237\|Ga0097621_100651342	Not Available	966	Open in IMG/M
3300006237\|Ga0097621_101097207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300006358\|Ga0068871_100539318	Not Available	1055	Open in IMG/M
3300006581\|Ga0074048_13438856	Not Available	557	Open in IMG/M
3300006844\|Ga0075428_101975009	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300006881\|Ga0068865_102124135	Not Available	511	Open in IMG/M
3300006903\|Ga0075426_10952284	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300006904\|Ga0075424_101014056	All Organisms → cellular organisms → Bacteria → Acidobacteria	885	Open in IMG/M
3300009100\|Ga0075418_10647869	All Organisms → cellular organisms → Bacteria → Acidobacteria	1138	Open in IMG/M
3300009100\|Ga0075418_11279107	All Organisms → cellular organisms → Bacteria → Acidobacteria	795	Open in IMG/M
3300009100\|Ga0075418_11568438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300009148\|Ga0105243_10638294	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300009148\|Ga0105243_12467523	Not Available	559	Open in IMG/M
3300009176\|Ga0105242_10030992	All Organisms → cellular organisms → Bacteria → Proteobacteria	4270	Open in IMG/M
3300009176\|Ga0105242_10677931	Not Available	1006	Open in IMG/M
3300009177\|Ga0105248_11255489	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300009551\|Ga0105238_12764511	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300009792\|Ga0126374_10563642	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300010397\|Ga0134124_10070012	All Organisms → cellular organisms → Bacteria → Acidobacteria	2989	Open in IMG/M
3300010400\|Ga0134122_10188973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1701	Open in IMG/M
3300011422\|Ga0137425_1183224	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300012212\|Ga0150985_101805873	All Organisms → cellular organisms → Bacteria	1840	Open in IMG/M
3300012212\|Ga0150985_103241311	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300012469\|Ga0150984_103742619	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300012893\|Ga0157284_10026942	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300012895\|Ga0157309_10170772	Not Available	661	Open in IMG/M
3300012898\|Ga0157293_10019262	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300012900\|Ga0157292_10423298	Not Available	509	Open in IMG/M
3300012903\|Ga0157289_10279022	Not Available	582	Open in IMG/M
3300012910\|Ga0157308_10286872	Not Available	597	Open in IMG/M
3300012911\|Ga0157301_10203239	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300012912\|Ga0157306_10352534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300012924\|Ga0137413_10912602	All Organisms → cellular organisms → Bacteria → Proteobacteria	683	Open in IMG/M
3300012943\|Ga0164241_10629586	Not Available	777	Open in IMG/M
3300012961\|Ga0164302_11075182	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300012985\|Ga0164308_10036035	All Organisms → cellular organisms → Bacteria → Acidobacteria	3071	Open in IMG/M
3300013296\|Ga0157374_11327602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300013308\|Ga0157375_10999838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	976	Open in IMG/M
3300014745\|Ga0157377_11596484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300015372\|Ga0132256_102577025	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300015374\|Ga0132255_103231156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300016404\|Ga0182037_11982829	Not Available	522	Open in IMG/M
3300017792\|Ga0163161_11733208	Not Available	554	Open in IMG/M
3300018067\|Ga0184611_1071938	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300018081\|Ga0184625_10254740	Not Available	919	Open in IMG/M
3300018432\|Ga0190275_10231785	All Organisms → cellular organisms → Bacteria → Proteobacteria	1769	Open in IMG/M
3300018481\|Ga0190271_13173050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	551	Open in IMG/M
3300018482\|Ga0066669_10482758	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300019362\|Ga0173479_10036571	Not Available	1528	Open in IMG/M
3300019362\|Ga0173479_10113469	Not Available	1026	Open in IMG/M
3300021082\|Ga0210380_10417119	Not Available	614	Open in IMG/M
3300021082\|Ga0210380_10466268	Not Available	579	Open in IMG/M
3300021859\|Ga0210334_11078735	Not Available	723	Open in IMG/M
3300024187\|Ga0247672_1017677	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300025907\|Ga0207645_10531551	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300025908\|Ga0207643_10483831	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300025920\|Ga0207649_10487058	Not Available	936	Open in IMG/M
3300025923\|Ga0207681_10229000	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300025931\|Ga0207644_10839268	Not Available	769	Open in IMG/M
3300025940\|Ga0207691_10982281	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	705	Open in IMG/M
3300025972\|Ga0207668_10988484	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300026116\|Ga0207674_11887703	Not Available	564	Open in IMG/M
3300026118\|Ga0207675_100111068	All Organisms → cellular organisms → Bacteria	2586	Open in IMG/M
3300026118\|Ga0207675_100764656	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Limnoglobus → Limnoglobus roseus	978	Open in IMG/M
3300026118\|Ga0207675_101334287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300026121\|Ga0207683_10094106	All Organisms → cellular organisms → Bacteria	2670	Open in IMG/M
3300027682\|Ga0209971_1105302	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300027874\|Ga0209465_10229585	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300027915\|Ga0209069_10517460	Not Available	675	Open in IMG/M
3300028379\|Ga0268266_12244014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300028380\|Ga0268265_12267350	Not Available	550	Open in IMG/M
3300028812\|Ga0247825_10026421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3811	Open in IMG/M
3300029636\|Ga0222749_10400449	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300031198\|Ga0307500_10283010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300031226\|Ga0307497_10460349	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300031562\|Ga0310886_10654096	Not Available	650	Open in IMG/M
3300031847\|Ga0310907_10656433	Not Available	576	Open in IMG/M
3300031858\|Ga0310892_10220200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1153	Open in IMG/M
3300031892\|Ga0310893_10439099	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300031938\|Ga0308175_101547607	Not Available	741	Open in IMG/M
3300031938\|Ga0308175_102046014	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300031939\|Ga0308174_11109580	Not Available	673	Open in IMG/M
3300032002\|Ga0307416_102970744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	567	Open in IMG/M
3300032012\|Ga0310902_10088933	Not Available	1623	Open in IMG/M
3300032013\|Ga0310906_10039391	All Organisms → cellular organisms → Bacteria → Proteobacteria	2235	Open in IMG/M
3300032075\|Ga0310890_10976129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	680	Open in IMG/M
3300032075\|Ga0310890_11540985	Not Available	548	Open in IMG/M
3300032076\|Ga0306924_10188014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2371	Open in IMG/M
3300032144\|Ga0315910_10912036	Not Available	685	Open in IMG/M
3300032770\|Ga0335085_12515424	Not Available	510	Open in IMG/M
3300033004\|Ga0335084_11898847	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300033550\|Ga0247829_11008189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300034148\|Ga0364927_0172159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300034664\|Ga0314786_126993	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300034664\|Ga0314786_144826	Not Available	551	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.98%
Host-Associated	Host-Associated	46.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	47.79%
Plants	Host-Associated → Plants	46.02%
Aquatic	Environmental → Aquatic	6.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.81%
Sediment	Environmental → Aquatic → Sediment	3.54%
Roots	Host-Associated → Plants → Roots	2.65%
Freshwater	Environmental → Aquatic → Freshwater	1.77%
Marine	Environmental → Aquatic → Marine	0.89%
Floodplain	Environmental → Terrestrial → Floodplain	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.16%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.39%
Loam	Environmental → Terrestrial → Soil → Loam	5.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.77%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.89%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.89%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.16%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	13.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.77%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	13.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.65%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.77%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.77%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021859	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.306 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1055781533	3300000559	Soil	KDQDKMIDASNAVNASCEGCHRRWRNPRTPANRCK*
JGI11643J12802_106191182	3300000890	Soil	QDVRDISMKAYAAAQAKDQDKIIAVSETLSAACAGCHRKWRDRKAPENRCK*
Ga0063356_1050820382	3300004463	Arabidopsis Thaliana Rhizosphere	VQQVRDASMQAYKAAQAKDQDKMIELSEKLSACCSGCHRKWRDRRAIENRCK*
Ga0066395_102892511	3300004633	Tropical Forest Soil	WVAFVQEVRDVGMKSYKAAQAKDQDKIIEISDTLSRACSGCHRKFRDRKTPQNRCK*
Ga0066810_101730322	3300005169	Soil	YKAAQAKDQDKMIDIAETLSRACAGCHRKWRDRRTPDNRCK*
Ga0068869_1015274291	3300005334	Miscanthus Rhizosphere	AQAKDQDKIVEISETLSTSCSGCHRKFRDRKAPENRCKPS*
Ga0070668_1018739741	3300005347	Switchgrass Rhizosphere	KAYRAAQAKDQDKMIDISESLSAACAGCHRKWRDRRTPDNRCK*
Ga0070673_1011107902	3300005364	Switchgrass Rhizosphere	YAAAQAKDQDKIIAVSETLSASCAGCHRKWRDRKTKENRCK*
Ga0070667_1006679601	3300005367	Switchgrass Rhizosphere	VSMKSYKAAQAKDQEKMIDLSEALSRSCAGCHRKWRDRRTPDNRCK*
Ga0070662_1001633963	3300005457	Corn Rhizosphere	QDVRDISMKAYAAAQAKDQDKIIAVSETLSAACAGCHRKWRDRKAPDNRCK*
Ga0070672_1019436102	3300005543	Miscanthus Rhizosphere	GMKAYKAAQAKDQEKMIDIGETLSAACAGCHRKWRDRRTPANRCM*
Ga0070686_1013215992	3300005544	Switchgrass Rhizosphere	KAAQAKDQDKIVEISETLSTSCSGCHRKFRDRKAPENRCKPS*
Ga0068866_103046622	3300005718	Miscanthus Rhizosphere	SMKAYKAAQAKDQEKIIELSEALSASCVNCHRKWRDRKTPANHCK*
Ga0066903_1062744661	3300005764	Tropical Forest Soil	MKAFKAAQAKDQEKMIELSVTVSDACAHCHRKWRDRKTPANRCK*
Ga0066903_1087913502	3300005764	Tropical Forest Soil	DAGMKAFKAAQEKNQDKMIELSVTVSDACAHCHRKWRDRKTPANRCK*
Ga0068870_111582251	3300005840	Miscanthus Rhizosphere	KSFTAAQAKDQDKIIELSETLSTACSGCHRKFRDRKTPDNRCKS*
Ga0068860_1002113623	3300005843	Switchgrass Rhizosphere	MKAYKAAQAKDQEKMIDLSETVSASCAGCHRKWRDRRTPANRCK*
Ga0068862_1014593332	3300005844	Switchgrass Rhizosphere	FVQEVRDAGMKAYKAAQDKDQEKMIGIGETLSAACAGCHRKWRDRRTPANRCK*
Ga0097621_1006513421	3300006237	Miscanthus Rhizosphere	QAYRAAQANDQDKMVENSGTLSAACADCHRKWRDRRTPENRCR*
Ga0097621_1010972072	3300006237	Miscanthus Rhizosphere	QDKIIELSETLSTACSGCHRKFRDRKTPDNRCKS*
Ga0068871_1005393182	3300006358	Miscanthus Rhizosphere	MFVQEVRDVSMEAYKAAQAKDQDKMIDISETLSKACAGCHRKWRDRRTPDNRCK*
Ga0074048_134388562	3300006581	Soil	RDVSMKAYKAAQAKDQDKMIDIAETLSRACAGCHRKWRDRRTPDNRCK*
Ga0075428_1019750092	3300006844	Populus Rhizosphere	QTKSQEKMMETSETLNAACVGCHRKWRDRRTPANRCK*
Ga0068865_1021241351	3300006881	Miscanthus Rhizosphere	FVQQVRDTSMQAYKAAQAKDQQKMIDVSEPLSASCAGCHRKWRDRRTPANRCKLGT*
Ga0075426_109522841	3300006903	Populus Rhizosphere	GQAKDQDKLIELSETVSGSCEHCHRKWRNRRAPAIRCK*
Ga0075424_1010140561	3300006904	Populus Rhizosphere	QQLRDASMASFKAAQAKDQEKMISLADTLNASCVGCHRKWRDRKTPDNRCK*
Ga0075418_106478692	3300009100	Populus Rhizosphere	EVRDTSMSAYKAAQTKSQDKMIEISETLSTACAGCHRKWRDRRTPDNRCK*
Ga0075418_112791072	3300009100	Populus Rhizosphere	EVRDASMKAYKAAQAKDQDKMIELSETLSTACAGCHRKWRDRRTSDNRCK*
Ga0075418_115684381	3300009100	Populus Rhizosphere	DQEKMLDVAETLSATCTGCHRKWRDRRAPDNRCK*
Ga0105243_106382943	3300009148	Miscanthus Rhizosphere	DQSKMIELSETLNASCEGCHRKWRGRGGPANRCK*
Ga0105243_124675231	3300009148	Miscanthus Rhizosphere	ARAKDQDKIIENSETLSASCAGCHRKWRDRKTPDNHCK*
Ga0105242_100309926	3300009176	Miscanthus Rhizosphere	YAAAQAKDQDKMIAIAETLSASCDGCHRKWRNPRPPAARCK*
Ga0105242_106779312	3300009176	Miscanthus Rhizosphere	QQVRDASMKAYKAAQAKDQDKMIELSETLSAACAGCHRKWRDRKTPANHCK*
Ga0105248_112554892	3300009177	Switchgrass Rhizosphere	LRDASMQAYRAAQAKDQDKMIENSETLSAACAGCHLKWRDRRTAENRCR*
Ga0105238_127645112	3300009551	Corn Rhizosphere	DQEKIIELSEALSASCANCHRKWRDRKTPANHCK*
Ga0126374_105636421	3300009792	Tropical Forest Soil	VRDVGMKSYKAAQAKDQDKIIEISDTLSRACSGCHRKFRDRKTPQNRCK*
Ga0134124_100700122	3300010397	Terrestrial Soil	SQDKMIEISETLSTACAGCHRKWRDRRTPDNRCK*
Ga0134122_101889731	3300010400	Terrestrial Soil	MKAYKVAQAKDQEKMIDLSETLSRSCAGCHRKWRDRRTPENRCK*
Ga0137425_11832242	3300011422	Soil	DQDKMIETAEALDKSCAGCHRKFRDRKAPENRCK*
Ga0150985_1018058731	3300012212	Avena Fatua Rhizosphere	KDQDKMIENSEMLSEACAACHRKWRDRRTAENRCK*
Ga0150985_1032413111	3300012212	Avena Fatua Rhizosphere	ASMQAYTAAKAKDQDKMIANSETLTTACAGCHRKWRDRRTPENRCK*
Ga0150984_1037426193	3300012469	Avena Fatua Rhizosphere	AAQAKDQDEMIAISETLSASCNNCHRRYRRGGANRCK*
Ga0157284_100269421	3300012893	Soil	KDQDKIIAVSETLSASCAGCHRKWRDRKTKENRCK*
Ga0157309_101707721	3300012895	Soil	AMFVQEVRDVSLKAYRAAQAKDQDKMIEISETLSTACAGCHRKWRDRKAPDNRCK*
Ga0157293_100192621	3300012898	Soil	KDQDKMIEISETLSTACAGCHRKWRDRKAPDNRCK*
Ga0157292_104232981	3300012900	Soil	RDVSMKAYRAAQAKDQDKMIEISETLSAACAGCHRKWRDRKAPDNRCK*
Ga0157289_102790222	3300012903	Soil	AKDQDKMIEISETLSAACAGCHRKWRDRKAPDNRCK*
Ga0157308_102868722	3300012910	Soil	SMKAYRAAQAKDQDKMIEISETLSAACAGCHRKWRDRKAPDNRCK*
Ga0157301_102032392	3300012911	Soil	MFVQEVRDASMKAYKAAQAKDQDKMIELSGTLSTACAGRHRKWRDRRTPDNRCK*
Ga0157306_103525341	3300012912	Soil	SQEKMMETSETLNAACVGCHRKWRDRRTPANRCK*
Ga0137413_109126021	3300012924	Vadose Zone Soil	YKAAQAKDQNKMIDNSETLSAACAHCHRKWRDRKTPATRCK*
Ga0164241_106295862	3300012943	Soil	EVRDVSMKAYRAAQAKDQDKMIEISETLSAACAGCHRKWRDRKAPDNRCK*
Ga0164302_110751821	3300012961	Soil	TAAQAKDRDKLIDLSQTVSDACAHCHRKWRDRKTPANRCK*
Ga0164308_100360351	3300012985	Soil	DASLQAYRAAQANDQDKMIENSGTLSAACADCHRKWRDRRTPENRCR*
Ga0157374_113276021	3300013296	Miscanthus Rhizosphere	YKAAQTKSQDKMIQISETLSTACAGCHRKWRDRRTPDNRCK*
Ga0157375_109998382	3300013308	Miscanthus Rhizosphere	VQEVRDVSMKAYKAAQAKDQDTMIELSGTLSTACAGCHRKWRDRRTPANRCK*
Ga0157377_115964842	3300014745	Miscanthus Rhizosphere	DVSIKAYKAAQAKDQDTMIELSGTLSTACAGCHRKWRDRRTPANRCK*
Ga0132256_1025770252	3300015372	Arabidopsis Rhizosphere	VRDTSMSAYKAAQTKSQDKMIEISETLSTACAGCHRKWRDRRTPDNRCK*
Ga0132255_1032311562	3300015374	Arabidopsis Rhizosphere	YGAARAKDQGKMIEISETLSAACAGCHRKWRDRKAPDNRCK*
Ga0182037_119828291	3300016404	Soil	AWATFVQEVRDAGMQAYKAAQAKDQNKIIEISETLSTSCAHCHRKWRDRKQPANRCK
Ga0163161_117332083	3300017792	Switchgrass Rhizosphere	MKAYRAAQAKDQDKMIENSETLSAACAGCHRKWRDRRTPEKRCQ
Ga0184611_10719382	3300018067	Groundwater Sediment	FVQEVRDAGMKAYKAAQAKDQEKMIDLSEALSRSCAGCHRKWRDRRTPDNRCK
Ga0184625_102547402	3300018081	Groundwater Sediment	DVSMKAYRAAQAKDQDKMIEISETLSTACAGCHRKWRDRKAPDNRCK
Ga0190275_102317851	3300018432	Soil	SYAAAQAKDQDKMIALAETLSVACAGCHRQGRDRRTPDNRCKEGSPPRRGG
Ga0190271_131730501	3300018481	Soil	TMFVQDVRDASMSAYKAAQAKDQDKMIDLAETLNAACVGCHRKWRDRKTADNRCK
Ga0066669_104827582	3300018482	Grasslands Soil	ATFVQEVRDASMKAYTAAQAKDQDKLIGLSETVSDACAHCHRKWRDRKTPANRCK
Ga0173479_100365711	3300019362	Soil	QAKDQDKMIETAETLSAACAGCHRKFRDRKAPENRCKVQ
Ga0173479_101134691	3300019362	Soil	QAKDQDKMIEISETLSAACAGCHRKWRDRKAPDNRCK
Ga0210380_104171191	3300021082	Groundwater Sediment	QSKDQDTMIATAEPLSASCAGCHRKFRDRKTPDNRCK
Ga0210380_104662681	3300021082	Groundwater Sediment	RDASMKSYKAALAKDQDKMIEFSEELNASCANCHRKWRDRRTPDNRCK
Ga0210334_110787352	3300021859	Estuarine	VREAGMKAYTAARAKDQNKMIETAETLDRSCSGCHRTWRDRRTPDNRCK
Ga0247672_10176773	3300024187	Soil	QAKDQEKIVDISETLSNSCSHCHRKWRDRRGANRCK
Ga0207645_105315511	3300025907	Miscanthus Rhizosphere	AAAQAKDQDKMIAIAETLSASCDGCHRKWRNPRPPASRCK
Ga0207643_104838312	3300025908	Miscanthus Rhizosphere	AAQAKDQDKMIELSGTLSTACAGCHRKWRDRRTPDNRCK
Ga0207649_104870582	3300025920	Corn Rhizosphere	MQAYKAAQAKDQDKMIEISEPLSAACAGCHRKWRDRRTPANRCK
Ga0207681_102290001	3300025923	Switchgrass Rhizosphere	AAQTKSQDKMIEISETLSTACAGCHRKWRDRRTPDNRCK
Ga0207644_108392682	3300025931	Switchgrass Rhizosphere	RAAQAKDQDKMIEISETLSAACAGCHRKWRDRKAPDNRCK
Ga0207691_109822811	3300025940	Miscanthus Rhizosphere	GMKAYKAAQAKDQEKMIDIGETLSAACAGCHRKWRDRRTPANRCM
Ga0207668_109884841	3300025972	Switchgrass Rhizosphere	RDASMKAYRAAQAKDQDKMIDISESLSAACAGCHRKWRDRRTPDNRCK
Ga0207674_118877031	3300026116	Corn Rhizosphere	QAYKAAQAKDQEKMLDVAETLSATCSGCHRKWRDRRAPGNRCK
Ga0207675_1001110684	3300026118	Switchgrass Rhizosphere	MKAYRAAQAKDQDKMIEISETLSTACAGCHRKWRDRKAPDNRCK
Ga0207675_1007646562	3300026118	Switchgrass Rhizosphere	AKDQDKMIAIAETLSASCDGCHRKWRNPRPPASRCK
Ga0207675_1013342871	3300026118	Switchgrass Rhizosphere	KDQDKIIEIAETLSASCDGCHRKWRNPRPPAGRCK
Ga0207683_100941062	3300026121	Miscanthus Rhizosphere	AYKAAQTKSQDKMIEISETLSTACAGCHRKWRDRRTPDNRCK
Ga0209971_11053022	3300027682	Arabidopsis Thaliana Rhizosphere	ASMKAYKAAQAKDQDKMIELSETLSTACAGCHRKWRDRRTPDNRCR
Ga0209465_102295853	3300027874	Tropical Forest Soil	WVAFVQEVRDVGMKSYKAAQAKDQDKIIEISDTLSRACSGCHRKFRDRKTPQNRCK
Ga0209069_105174602	3300027915	Watersheds	GMMAYKAAQAKDQDKMRDISEPLSAACAGCHRKWRDRRTPANRCK
Ga0268266_122440142	3300028379	Switchgrass Rhizosphere	DVRNASMSAYKAAQAKDQEKMIAISETLSAACSGCHRKWRDRRMPENRCR
Ga0268265_122673502	3300028380	Switchgrass Rhizosphere	RDASMKAYRAAQARDQDKMIENSEALTAACAGCHRKWRDRKTPDNRCK
Ga0247825_100264211	3300028812	Soil	MFVQEVRDASMKAYRAAQARDQDKMIDTAETLSAACAGCHRKWRDRRTPDNRRK
Ga0222749_104004492	3300029636	Soil	MKAYKAAQAKDQDKMIDLSETLSAACAGCHRKWRDRRTPANRCK
Ga0307500_102830101	3300031198	Soil	MFVQELGDVSMKAYRAAQAKDQAKMIELSETLSAACAGCHRKWRDRRAPDNRCK
Ga0307497_104603492	3300031226	Soil	EVRDAGMQAYTAAQAKDRDKLIDLSETVSAACAHCHRKWRDRRTPANRCK
Ga0310886_106540961	3300031562	Soil	DAGMNAYKAAQTKSQEKMMETSETLNAACVGCHRKWRDRRTPANRCK
Ga0310907_106564331	3300031847	Soil	VSMKAYRAAQAKDQDKMIEISETPSAACAGCHRKWRDRKAPDNRCK
Ga0310892_102202001	3300031858	Soil	DASMKAYKAAQAKDQDKMIELSETLSTACAGCHRKWRDRRTPANRCK
Ga0310893_104390992	3300031892	Soil	KAKDQDKIIEISETLSASCSGCHRKWRDRKTPDNRCK
Ga0308175_1015476071	3300031938	Soil	KAYAAARAKDQAKMIDVAETLSSACAGCHRKWRDRKSPENRCR
Ga0308175_1020460143	3300031938	Soil	KDQDKMIANSATLTAACADCHRKWRDRKTPDNRCT
Ga0308174_111095801	3300031939	Soil	AYTAAQAKDQDKMIELSAMVSDACGHCHRKFRDRRTAANRCKP
Ga0307416_1029707442	3300032002	Rhizosphere	SQELRDASMKAYTAAQARSIEKVFEASEVLSANCAGCHRQWRDRRKQPRCQ
Ga0310902_100889332	3300032012	Soil	DTSMKAYAAAQAKDQDKIIAVSETLSASCAGCHRKWRDRKTKENRCK
Ga0310906_100393911	3300032013	Soil	YRAAQAKDQDKMIEISETLSTACAGCHRKWRDRKAPDNRCK
Ga0310890_109761292	3300032075	Soil	RAAQAKDQDKMIEISETLSTACAGCHRKWRDRKAPDNRCK
Ga0310890_115409852	3300032075	Soil	AMFVQELRDVSMKAYGAAQAKDQDKMIDISETLSAACAGCHRKWRDRKAPDNRCK
Ga0306924_101880141	3300032076	Soil	SMEAYKAAQAKDQDKIVDLSGRLSASCAGCHRKWRDRRTPENRCK
Ga0315910_109120362	3300032144	Soil	MKSYKAAQAKDQDQMIATAETLSTSCANCHRRWRDRRAPENRCKEPVK
Ga0335085_125154241	3300032770	Soil	AKDQDKLIEISETLSASCSHCHRKWRDRRTPANRCK
Ga0335084_118988472	3300033004	Soil	MQAYKAAQAKDQNKIIEISETLSTSCAHCHRKWRDRRQPANRCK
Ga0247829_110081891	3300033550	Soil	SAYKAAQTKSQDKMIEISETLSTACAGCHRKWRDRRTPDNRCK
Ga0364927_0172159_486_620	3300034148	Sediment	MKAYRAAQAKDQDRMIEISETLSAACAGCHRKWRDRKTPDNRCK
Ga0314786_126993_3_128	3300034664	Soil	YSAAKAKDQDKIIEISETLSASCSGCHRKWRDRKTPDNRCK
Ga0314786_144826_360_524	3300034664	Soil	MFVQEVRDVSMKAYRAAQAKDQDKMIEISETLSTACAGCHRKWRDRKAPDNRCK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082848

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences