Metagenome Family F082830

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082830
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	62 residues
Representative Sequence	IQQEVAGSVANTDLQFIVIQSPQKPWNTLLGGLFEFGKDGYVLLEGGVGARKSVLAAAVYRF
Number of Associated Samples	90
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.85 %
% of genes near scaffold ends (potentially truncated)	87.61 %
% of genes from short scaffolds (< 2000 bps)	95.58 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.920 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (15.044 % of family members)
Environment Ontology (ENVO)	Unclassified (64.602 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (73.451 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 38.89% Coil/Unstructured: 61.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13417	GST_N_3	7.96
PF02803	Thiolase_C	7.08
PF09865	DUF2092	4.42
PF00211	Guanylate_cyc	1.77
PF00924	MS_channel	0.88
PF03466	LysR_substrate	0.88
PF01527	HTH_Tnp_1	0.88
PF04366	Ysc84	0.88
PF08241	Methyltransf_11	0.88
PF01625	PMSR	0.88
PF00069	Pkinase	0.88
PF05957	DUF883	0.88
PF13936	HTH_38	0.88
PF13424	TPR_12	0.88
PF05359	DUF748	0.88
PF13673	Acetyltransf_10	0.88
PF13414	TPR_11	0.88
PF02537	CRCB	0.88
PF00067	p450	0.88
PF08327	AHSA1	0.88
PF13302	Acetyltransf_3	0.88
PF13207	AAA_17	0.88
PF04367	DUF502	0.88
PF03922	OmpW	0.88
PF12695	Abhydrolase_5	0.88
PF00583	Acetyltransf_1	0.88
PF01979	Amidohydro_1	0.88
PF02627	CMD	0.88
PF03401	TctC	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	7.08
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.54
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.77
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG0239	Fluoride ion exporter CrcB/FEX, affects chromosome condensation	Cell cycle control, cell division, chromosome partitioning [D]	0.88
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.88
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.88
COG2124	Cytochrome P450	Defense mechanisms [V]	0.88
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.88
COG2928	Uncharacterized membrane protein	Function unknown [S]	0.88
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.88
COG2982	Uncharacterized conserved protein AsmA involved in outer membrane biogenesis	Cell wall/membrane/envelope biogenesis [M]	0.88
COG3047	Outer membrane protein OmpW	Cell wall/membrane/envelope biogenesis [M]	0.88
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.88
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.88
COG4575	Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family	Translation, ribosomal structure and biogenesis [J]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.92 %
Unclassified	root	N/A	7.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.92 %
Unclassified	root	N/A	7.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.92 %
Unclassified	root	N/A	7.08 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	76.11 %
Unclassified	root	N/A	7.08 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	13.27 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	11.50 %
Unclassified	root	N/A	7.08 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.08 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	3.54 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.77 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.77 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.08 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.54 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.77 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1.77 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.77 %
Usitatibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.08 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.54 %
Dokdonella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella	1.77 %
unclassified Burkholderiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae	1.77 %
Fontimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Fontimonas	0.88 %
Usitatibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.08 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.54 %
Burkholderiaceae bacterium 16	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium 16	1.77 %
Dokdonella fugitiva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella → Dokdonella fugitiva	1.77 %
Fontimonas thermophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Fontimonas → Fontimonas thermophila	0.88 %
Usitatibacter rugosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter rugosus	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_9128605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1473	Open in IMG/M
3300000559\|F14TC_102546702	All Organisms → cellular organisms → Bacteria → Proteobacteria	1882	Open in IMG/M
3300001213\|JGIcombinedJ13530_102662163	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300002239\|JGI24034J26672_10064394	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300004479\|Ga0062595_100726041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	803	Open in IMG/M
3300005335\|Ga0070666_10192359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1434	Open in IMG/M
3300005335\|Ga0070666_10397953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	990	Open in IMG/M
3300005335\|Ga0070666_10972161	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300005338\|Ga0068868_100086231	All Organisms → cellular organisms → Bacteria → Proteobacteria	2524	Open in IMG/M
3300005338\|Ga0068868_100947083	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300005344\|Ga0070661_101861401	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300005347\|Ga0070668_100350877	All Organisms → cellular organisms → Bacteria → Proteobacteria	1249	Open in IMG/M
3300005347\|Ga0070668_100945976	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300005347\|Ga0070668_101598933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	597	Open in IMG/M
3300005353\|Ga0070669_101457251	All Organisms → cellular organisms → Bacteria → Proteobacteria	595	Open in IMG/M
3300005355\|Ga0070671_100286155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1402	Open in IMG/M
3300005355\|Ga0070671_100339507	All Organisms → cellular organisms → Bacteria → Proteobacteria	1281	Open in IMG/M
3300005364\|Ga0070673_101416217	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005366\|Ga0070659_101681499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	567	Open in IMG/M
3300005367\|Ga0070667_100902521	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300005434\|Ga0070709_10509417	All Organisms → cellular organisms → Bacteria → Proteobacteria	915	Open in IMG/M
3300005436\|Ga0070713_100998494	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300005438\|Ga0070701_10668519	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300005441\|Ga0070700_101765494	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005456\|Ga0070678_101625999	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300005457\|Ga0070662_101068557	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300005543\|Ga0070672_100020054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4869	Open in IMG/M
3300005543\|Ga0070672_101179770	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300005544\|Ga0070686_101561968	All Organisms → cellular organisms → Bacteria → Proteobacteria	557	Open in IMG/M
3300005615\|Ga0070702_100118037	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300005718\|Ga0068866_10260592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1065	Open in IMG/M
3300005718\|Ga0068866_11100313	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300005842\|Ga0068858_101160457	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300005842\|Ga0068858_102220762	All Organisms → cellular organisms → Bacteria → Proteobacteria	543	Open in IMG/M
3300006237\|Ga0097621_101783093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	587	Open in IMG/M
3300006881\|Ga0068865_100431821	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300006881\|Ga0068865_100594306	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300009094\|Ga0111539_11912103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	688	Open in IMG/M
3300009101\|Ga0105247_11377595	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300009148\|Ga0105243_11183281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter rugosus	777	Open in IMG/M
3300009148\|Ga0105243_12596099	All Organisms → cellular organisms → Bacteria → Proteobacteria	546	Open in IMG/M
3300010397\|Ga0134124_11871493	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300010399\|Ga0134127_11699074	Not Available	706	Open in IMG/M
3300010401\|Ga0134121_10045314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3600	Open in IMG/M
3300010401\|Ga0134121_12137750	All Organisms → cellular organisms → Bacteria → Proteobacteria	595	Open in IMG/M
3300010403\|Ga0134123_11759383	All Organisms → cellular organisms → Bacteria → Proteobacteria	672	Open in IMG/M
3300012514\|Ga0157330_1073388	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012533\|Ga0138256_10972345	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300012904\|Ga0157282_10066121	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300012914\|Ga0157297_10145755	Not Available	766	Open in IMG/M
3300013100\|Ga0157373_11099705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	596	Open in IMG/M
3300013306\|Ga0163162_11069876	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300013307\|Ga0157372_13275459	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300014325\|Ga0163163_11644418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	703	Open in IMG/M
3300014326\|Ga0157380_10563204	All Organisms → cellular organisms → Bacteria → Proteobacteria	1120	Open in IMG/M
3300014326\|Ga0157380_10725728	All Organisms → cellular organisms → Bacteria → Proteobacteria	1002	Open in IMG/M
3300014745\|Ga0157377_10331730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella → Dokdonella fugitiva	1014	Open in IMG/M
3300014968\|Ga0157379_12511984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300015373\|Ga0132257_102440960	All Organisms → cellular organisms → Bacteria → Proteobacteria	679	Open in IMG/M
3300015374\|Ga0132255_100758590	All Organisms → cellular organisms → Bacteria → Proteobacteria	1444	Open in IMG/M
3300015374\|Ga0132255_103983482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	627	Open in IMG/M
3300015374\|Ga0132255_104267021	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300018083\|Ga0184628_10216749	All Organisms → cellular organisms → Bacteria → Proteobacteria	1002	Open in IMG/M
3300018481\|Ga0190271_12222159	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300025893\|Ga0207682_10207634	All Organisms → cellular organisms → Bacteria → Proteobacteria	902	Open in IMG/M
3300025893\|Ga0207682_10211828	All Organisms → cellular organisms → Bacteria → Proteobacteria	894	Open in IMG/M
3300025899\|Ga0207642_10386541	Not Available	834	Open in IMG/M
3300025903\|Ga0207680_10537095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Fontimonas → Fontimonas thermophila	834	Open in IMG/M
3300025903\|Ga0207680_10641494	All Organisms → cellular organisms → Bacteria → Proteobacteria	760	Open in IMG/M
3300025906\|Ga0207699_10449427	All Organisms → cellular organisms → Bacteria → Proteobacteria	924	Open in IMG/M
3300025907\|Ga0207645_10073454	All Organisms → cellular organisms → Bacteria → Proteobacteria	2189	Open in IMG/M
3300025908\|Ga0207643_10138435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1453	Open in IMG/M
3300025908\|Ga0207643_10151623	All Organisms → cellular organisms → Bacteria → Proteobacteria	1390	Open in IMG/M
3300025919\|Ga0207657_10486899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	967	Open in IMG/M
3300025931\|Ga0207644_10911487	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300025933\|Ga0207706_10380473	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300025933\|Ga0207706_10637603	Not Available	913	Open in IMG/M
3300025937\|Ga0207669_10628081	All Organisms → cellular organisms → Bacteria → Proteobacteria	876	Open in IMG/M
3300025938\|Ga0207704_10469674	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300025939\|Ga0207665_11344128	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300025941\|Ga0207711_10465535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1177	Open in IMG/M
3300025945\|Ga0207679_10640695	All Organisms → cellular organisms → Bacteria → Proteobacteria	960	Open in IMG/M
3300025960\|Ga0207651_10331382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1276	Open in IMG/M
3300025972\|Ga0207668_10691384	All Organisms → cellular organisms → Bacteria → Proteobacteria	896	Open in IMG/M
3300025981\|Ga0207640_10291085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium 16	1287	Open in IMG/M
3300026035\|Ga0207703_10836890	All Organisms → cellular organisms → Bacteria → Proteobacteria	880	Open in IMG/M
3300026035\|Ga0207703_11013547	All Organisms → cellular organisms → Bacteria → Proteobacteria	797	Open in IMG/M
3300026088\|Ga0207641_10826186	Not Available	917	Open in IMG/M
3300026089\|Ga0207648_10034080	All Organisms → cellular organisms → Bacteria → Proteobacteria	4491	Open in IMG/M
3300026089\|Ga0207648_12034477	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M
3300026118\|Ga0207675_102487009	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300026121\|Ga0207683_11604500	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300028379\|Ga0268266_11889406	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300028380\|Ga0268265_10248258	All Organisms → cellular organisms → Bacteria → Proteobacteria	1574	Open in IMG/M
3300028380\|Ga0268265_10258872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium 16	1546	Open in IMG/M
3300028587\|Ga0247828_10426468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dokdonella → Dokdonella fugitiva	770	Open in IMG/M
3300028592\|Ga0247822_11271537	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300028802\|Ga0307503_10700953	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300031170\|Ga0307498_10129128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	815	Open in IMG/M
3300031366\|Ga0307506_10297063	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300031768\|Ga0318509_10432396	All Organisms → cellular organisms → Bacteria → Proteobacteria	736	Open in IMG/M
3300031852\|Ga0307410_11948411	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300031908\|Ga0310900_11402799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	587	Open in IMG/M
3300031938\|Ga0308175_100318391	All Organisms → cellular organisms → Bacteria → Proteobacteria	1594	Open in IMG/M
3300031996\|Ga0308176_10264998	All Organisms → cellular organisms → Bacteria → Proteobacteria	1656	Open in IMG/M
3300032017\|Ga0310899_10411673	Not Available	650	Open in IMG/M
3300032074\|Ga0308173_10921857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	809	Open in IMG/M
3300032174\|Ga0307470_10535282	Not Available	862	Open in IMG/M
3300032174\|Ga0307470_11820109	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300032180\|Ga0307471_100968288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1018	Open in IMG/M
3300033550\|Ga0247829_10809595	Not Available	780	Open in IMG/M
3300034149\|Ga0364929_0109977	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300034818\|Ga0373950_0106796	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	66.37%
Environmental	Environmental	32.74%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	66.37%
Terrestrial	Environmental → Terrestrial	30.97%
Aquatic	Environmental → Aquatic	1.77%
Wastewater	Engineered → Wastewater	0.89%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	38.05%
Soil	Environmental → Terrestrial → Soil	30.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	26.55%
Roots	Host-Associated → Plants → Roots	1.77%
Marine	Environmental → Aquatic → Marine	0.89%
Sediment	Environmental → Aquatic → Sediment	0.89%
Floodplain	Environmental → Terrestrial → Floodplain	0.89%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.89%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	27.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	20.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.62%
Loam	Environmental → Terrestrial → Soil → Loam	7.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.42%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.77%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.77%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.89%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	27.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	20.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.77%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.77%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.89%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	15.04%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	10.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.08%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.19%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.77%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.89%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012533	Active sludge microbial communities from wastewater in Klosterneuburg, Austria - KNB2014incub_MG	Engineered	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0324.00007350	2162886012	Miscanthus Rhizosphere	IQQEVAGSVANTDLQFIVIQSPQKPWNTLLGGLFEFGKDGYVLLEGGVGARKSVLAAAVYRF
F14TC_1025467023	3300000559	Soil	DLQFVVVQSPVQPWNTLIGGLFEFGKDGYVLLEGGIGERMSILAAAVYRF*
JGIcombinedJ13530_1026621632	3300001213	Wetland	GSVANTDLQFIVIQSPQKPWNTLLGGLFEFGKDGFVLLEGGVGARKSILASAVYRF*
JGI24034J26672_100643942	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	QTVAGSVANTDLQFAVIQSPTQPWNTLLGGLIEFGKDGYILVEGGLGARKSILAAAVYRF
Ga0062595_1007260411	3300004479	Soil	DLQFIVIQSPQKPWNTLLGGLLEFGKNWVVLAEGGLGARKSILAAAVYRF*
Ga0070666_101923592	3300005335	Switchgrass Rhizosphere	MHQSIQQKVAGSVANTDLQFIVIQTPTKPWNTLLGGLLFEFGKDGYVLLEGGLGARTSILAAAVYRF*
Ga0070666_103979532	3300005335	Switchgrass Rhizosphere	AMHQKIQQEVAGSVADTDLQFIVIQSPQKPWNALLGGLLEFGKNWVVLAEGGLGARKSILAAAVYRF*
Ga0070666_109721612	3300005335	Switchgrass Rhizosphere	DLQFIVVQSPTQPWNTLLGALIEFGRDGYVLIEGGLGARTSILAAAVYRF*
Ga0068868_1000862311	3300005338	Miscanthus Rhizosphere	IQQEVAGSVANTDLQFVVLQSPTQPWNTLLGGLLEFGKDGYILLEGGFGARKSILASAIYRF*
Ga0068868_1009470832	3300005338	Miscanthus Rhizosphere	GSVADTDLQFIVIQSPQKPWNALLGGLLEFGKDWMILTEGGLGARKSILAAAAYRF*
Ga0070661_1018614011	3300005344	Corn Rhizosphere	VAGSVADTDLQFIVLQSPQKPWNALLGGLLEFGKDWVVLTEGGFGARKSILAAAMYRF*
Ga0070668_1003508771	3300005347	Switchgrass Rhizosphere	DVAGTDLQFVVLQSPVQPWNTLVGGLVEFGKDFVFILEGGLGERMSILGAVVYRF*
Ga0070668_1009459761	3300005347	Switchgrass Rhizosphere	MGAAVWIGAMHQSIQQKVAGSVANTDLQFIVIQTPTKPWNTLLGGLLFEFGKDGYVLLEGGLGARTSILAAAVYRF*
Ga0070668_1015989331	3300005347	Switchgrass Rhizosphere	GSVADSDLQFIVIQSPQKPWNTLLGGLLEFGKNWVVLAEGGLGARKSILAAAVYRF*
Ga0070669_1014572512	3300005353	Switchgrass Rhizosphere	TGGMYQKIQQTVAGSVANTDLQFIVVQSPTKPWNTLLGGLIEFGKDGYVLLEGGLGARMSILGAAVYRF*
Ga0070671_1002861553	3300005355	Switchgrass Rhizosphere	MHQSIQQKVAGSVANTDLQFIVIQTPTKPWNTLLGGLFEFAKDDYVLLEGGLGARTSILAAAVYRF*
Ga0070671_1003395071	3300005355	Switchgrass Rhizosphere	ADTDLQFIVMQSPTKPWNTLLGGLIDFGRSGYILIEGGLGERRSILIAGVYRF*
Ga0070673_1014162171	3300005364	Switchgrass Rhizosphere	AMHQSIQQTVAGSVANTDLQFIVMQSPTKPWNTLLGGLVEFGKKGYFLIEGGFGDRTSVLAAAVYRF*
Ga0070659_1016814991	3300005366	Corn Rhizosphere	MGAAVWIGAMHQSIQQKVAGSVANTDLQFIVIQTPTKPWNTLLGGLLFEFGKDGYVLLEGGLGARTSIL
Ga0070667_1009025212	3300005367	Switchgrass Rhizosphere	GSVADTDLQFIVIQSPQKPWNALLGGLLEFGKDWVILTEGGLGARKSILAAAAYRF*
Ga0070709_105094172	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MYQKIQQEVAGGVANTDLQFIVIQNAAHPWNALLGGLMEFGRNWGILIEGGLGPRTSILGAMGYRF*
Ga0070713_1009984941	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MYQKIQQEVAGGVANTDLQFIVIQNAAHPWSALLGGLMEFGRNWGILIEGGLGPRTSILGAMGYRF*
Ga0070701_106685191	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	GAMYQKIQETVAGDVANTNLQFVVVQSPQKPWNTLVGGIFEWGKDFYLLLEGGLGARMSILGAAGYRF*
Ga0070700_1017654941	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	TVAGSVANTDLQFIVVQSPTQPWNTLLGALIEFGRDGYVLIEGGLGARTSILAAAVYRF*
Ga0070678_1016259993	3300005456	Miscanthus Rhizosphere	GSVANTDLQFIVIQSPAKPWNTLLGGLVDFGKNGYVLIEGGLGARKSVLAAAVYRF*
Ga0070662_1010685571	3300005457	Corn Rhizosphere	AMHQKIQQEVAGSVADTDLQFIVLQSPQKPWNALLGGLLEFGKDWVVLTEGGFGARKSILAAAMYRF*
Ga0070672_1000200541	3300005543	Miscanthus Rhizosphere	MHQSIQQKVAGSVANTDLQFIVIQTPTKPWNTLLGGLFEFAKDGYVLLEGGLGARTSILAAAVYRF*
Ga0070672_1011797702	3300005543	Miscanthus Rhizosphere	AMHQRIQQTVAGSVANTDLQFVVIQSPTQPWNTLLGGLVEFGKDGYVLLEGGVGARTSILGAAVYRF*
Ga0070686_1015619681	3300005544	Switchgrass Rhizosphere	VAGSVANTDLQFVVLQSPTQPWNTLLGGLLEFGKDGYILLEGGFGARKSILASAIYRF*
Ga0070702_1001180373	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	ANTDLQFVVVQSPKQPWNTLLGGLLEFGKNWVVLAEGGLGARKSILAAAVYRF*
Ga0068866_102605921	3300005718	Miscanthus Rhizosphere	QFIVIQSPQKPWNTLLGGLLEFGKNWVVLAEGGLGARKSILAAAVYRF*
Ga0068866_111003131	3300005718	Miscanthus Rhizosphere	MHQKIQQTVAGSVADTDLQFIVLQSPTKPWNTLLGGLIDFGKSGYVLVEGGLGARKSILVAAVYRF*
Ga0068858_1011604571	3300005842	Switchgrass Rhizosphere	VAGSVADTDLQFIVMQSPTKPWNTLLGGLIDFGRSGYILIEGGLGERRSILIAGVYRF*
Ga0068858_1022207622	3300005842	Switchgrass Rhizosphere	HAIVGPNMGGAVWAGAMHQKIQQEVAGSVADTDLQFIVLQSPQKPWNALLGGLLEFGKDWVVLTEGGFGARKSILAAAMYRF*
Ga0097621_1017830932	3300006237	Miscanthus Rhizosphere	VGAAVWTGAMHQKIQQEVAGSVADTDLQFIVIQSPQKPWNALLGGLLEFGKNWVVLAEGGLGARKSILAAAVYRF*
Ga0068865_1004318213	3300006881	Miscanthus Rhizosphere	TDLQFIVIQSPTKPWNALLGGLLEFGKDWMVLAEGGLGARKSILASAVYRF*
Ga0068865_1005943061	3300006881	Miscanthus Rhizosphere	QFIVVQSPAKPWNTLLGGLVEFGKDWVVILEGGFGERTSILGAAVYRF*
Ga0111539_119121032	3300009094	Populus Rhizosphere	TGGMYQKIQQTVAGSVANTDLQFIVVQSPTKPWNTLLGGLIEFGKDGYVLLQGGLGARMSILGAAVYRF*
Ga0105247_113775951	3300009101	Switchgrass Rhizosphere	TVAGSVANTDLQFVVVQSPTQPWNTLLGGLFEFGKDGYVLLEGGFGARKSILAAAVYRF*
Ga0105243_111832813	3300009148	Miscanthus Rhizosphere	VAGAIADTELQFVVVQNPTKPWNTLLGGMIEFSRHGLVVVEGGLGARKSILAAAVYRF*
Ga0105243_125960991	3300009148	Miscanthus Rhizosphere	DLQFIVIQSPQKPWNALLGGLLEFGKDWMILTEGGLGARKSILAAAAYRF*
Ga0134124_118714932	3300010397	Terrestrial Soil	AAVWTGAMHQKIQQEVAGSVADTDLQFIVIQSPQKPWNALLGGLLEFGKNWVVLAEGGLGARKSILAAAVYRF*
Ga0134127_116990741	3300010399	Terrestrial Soil	KIQQEVAGGVANTDLQFIVIQNAAHPWNALLGGLMEFGRNWGILIEGGLGPRTSILGAMGYRF*
Ga0134121_100453142	3300010401	Terrestrial Soil	MHQKIQQEVAGSVADTDLQFIVIQSPQKPWNALLGGLLEFGKNWVVLAEGGLGARKSILAAAVYRF*
Ga0134121_121377501	3300010401	Terrestrial Soil	NTDLQFIVLQSPTQPWNTLLGGLLEFGKDGYILLEGGLGARKSILASAIYRF*
Ga0134123_117593832	3300010403	Terrestrial Soil	HQRIQQTVAGSVANTDLQFVVIQSPTQPWNTLLGGLVEFGKDGYVLLEGGVGARTSILGAAVYRF*
Ga0157330_10733881	3300012514	Soil	VRSKGVSSFWIQSPQKPWNALLGGLLEFGKDWVVLAEGGLGARKSILAAAVYRF*
Ga0138256_109723451	3300012533	Active Sludge	MHQQIQQEVAGSVADTDLEFLVVQSPANPWNMLLGGMFEFGEHGSVLLEGGLGTRTSILAAAVYRF*
Ga0157282_100661211	3300012904	Soil	SVANTDLQFAVIQSPTQPWNTLLGGLIEFGKDGYILVEGGLGARKSILAAAVYRF*
Ga0157297_101457551	3300012914	Soil	IQQTVAGAVANTDLQFIVVQSPKQPWNTLLGGLIEFGKDGYILVEGGLGARKSILAAAVYRF*
Ga0157373_110997051	3300013100	Corn Rhizosphere	SVANTDLQFAVVQSPRQPWNTLLGSVLEFGKDGYVLLEGGLGARKSILAAAVYRF*
Ga0163162_110698763	3300013306	Switchgrass Rhizosphere	ANTDLQFIVMQSPTKPWNTLLGGLVEFGKKGYFLIEGGFGDRTSVLAAAVYRF*
Ga0157372_132754591	3300013307	Corn Rhizosphere	MGAAVWIGAMHQSIQQKVAGSVANTDLQFMVIQTPTKPWNTLLGGLLFEFGKDGYVLLEGGLGARTSILAAAVY
Ga0163163_116444182	3300014325	Switchgrass Rhizosphere	AMHQNIQQTVAGSVANTDLQFVVLQSPVQPWNMLLGGLFEFGRDGYILLEGGVGERKSLLLAAVYRF*
Ga0157380_105632043	3300014326	Switchgrass Rhizosphere	AGPSVGAAVWTGAMHQKIQQEVAGSVADTDLQFIVIQSPQKPWNALLGGLLEFGKDWVVLAEGGLGARKSILAAAVYRF*
Ga0157380_107257282	3300014326	Switchgrass Rhizosphere	VADTDLQFIVIQSPQKPWNTLLGGLLEFGKNWVVLAEGGLGARKSILAAAVYRF*
Ga0157377_103317302	3300014745	Miscanthus Rhizosphere	ANTDLQFIVVQSPKQPWNTLLGGLLEFGKDGYVLLEGGIGERKSILASAVYRF*
Ga0157379_125119841	3300014968	Switchgrass Rhizosphere	QSIQQEVAGSVANTDLQFIVLQSPTQPWNTLLGGLLEFGKNGYVLFEEGFGDRKSILATAVYRF*
Ga0132257_1024409601	3300015373	Arabidopsis Rhizosphere	QRIQEEVAGSVANTDLQFIVVQSPTQPWNTLLGGLIEFGKEGYVLLEGGFGARMSILLAGVYRF*
Ga0132255_1007585903	3300015374	Arabidopsis Rhizosphere	MHQKIQQTVAGSVADTDLQFVVVQSPVQPWNTLLGGLFEFGKAGYVLLEGGVGERKSILAAAVYRF*
Ga0132255_1039834821	3300015374	Arabidopsis Rhizosphere	IQQEVAGDVAGTDLQFVVLQSPVQPWNTLVGGLVEFGKDFVFLLAGGLGERMSILGAVVYRF*
Ga0132255_1042670211	3300015374	Arabidopsis Rhizosphere	VAGSVANTDLQFVVVQSPTKPWNTLLGGLIEFGKDGYVLVEGGFGARDSILVAAVYRF*
Ga0184628_102167493	3300018083	Groundwater Sediment	DLQFIVIQSPQKPWNTLLGGLLEFGKDWVVLAEGGLGARKSILAAAMYRF
Ga0190271_122221591	3300018481	Soil	NVANTDLQFVVIQSPVQPWNTLIGGLFEFGKKGYVLLEGGVGERMSILAAAVYRF
Ga0207682_102076341	3300025893	Miscanthus Rhizosphere	MHQKIQQEVAGSVADTDLQFIVIQSPQKPWNALLGGLLEFGKDWMILTEGGLGARKSILAAAAYRF
Ga0207682_102118281	3300025893	Miscanthus Rhizosphere	LHGVVGPSVGAAVWTGAMHQKIQQEVAGSVADTDLQFIVIQSPQKPWNALLGGLLEFGKNWVVLAEGGLGARKSILAAAVYRF
Ga0207642_103865412	3300025899	Miscanthus Rhizosphere	RIQQTVAGSVADTDLQFAVIQSPTQPWNTLLGGLIEFGKDGYLLVEGGLGARKSILAAAVYRF
Ga0207680_105370951	3300025903	Switchgrass Rhizosphere	QQKVAGSVANTDLQFIVIQTPTKPWNTLLGGLLFEFGKDGYVLLEGGLGARTSILAAAVYRF
Ga0207680_106414941	3300025903	Switchgrass Rhizosphere	VGPSMGAAIWTGAMHQSIQQEVAGSVADTDLQFIVIQSPTKPWNALLGGLLEFGKDWMVLAEGGLGARKSILASAVYRF
Ga0207699_104494272	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MYQKIQQEVAGGVANTDLQFIVIQNAAHPWNALLGGLMEFGRNWGILIEGGLGPRTSILGAMGYRF
Ga0207645_100734541	3300025907	Miscanthus Rhizosphere	PSMGAAIWTGAMHQSIQQEVAGSVADTDLQFIVIQSPTKPWNALLGGLLEFGKDWMVLAEGGLGARKSILASAVYRF
Ga0207643_101384352	3300025908	Miscanthus Rhizosphere	GAMHQNIQQEVAGSVANTDLQFIVIQSPQKPWNTLLGGLFEFGKDGYVLLEGGVGARKSVLAAAVYRF
Ga0207643_101516231	3300025908	Miscanthus Rhizosphere	VAGSVADTDLQFIVIQSPQKPWNALLGGLLEFGKDWVILTEGGLGARKSILAAAAYRF
Ga0207657_104868992	3300025919	Corn Rhizosphere	MGAAVWIGAMHQSIQQKVAGSVANTDLQFIVIQTPTKPWNTLLGGLLFEFGKDGYILLEGGFGARKSILASAIYRF
Ga0207644_109114871	3300025931	Switchgrass Rhizosphere	IWTGAMYQRIQQTVAGEVANTDLQFIVSQTPVKPWNALLGGLLELRKDFVFIVEGGVGERKSILGAAVYRF
Ga0207706_103804731	3300025933	Corn Rhizosphere	MGAAVWIGAMHQSIQQKVAGSVANTDLQFIVIQTPTKPWNTLLGGLLFEFGKDGYVLLEGGLGARTSILAAAVYRF
Ga0207706_106376033	3300025933	Corn Rhizosphere	MYQRIQQEVAGDVAGTDLQFVVIQSPVKPWNTLVGGLVEFGRNFGFILEGGLGERMSILGAAVYRF
Ga0207669_106280812	3300025937	Miscanthus Rhizosphere	VAGSVADTDLQFIVIQSPQKPWNALLGGLLEFGKDWMILTEGGLGARKSILAAAAYRF
Ga0207704_104696742	3300025938	Miscanthus Rhizosphere	HKSIQQKGAGSVANTDLQFIVVQSPAKPWNTLLGGLVEFGKDWVVILEGGFGERTSILGAAVYRF
Ga0207665_113441281	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LVRFKTGGVVTSVQFVVVQSPAKPWNALLGGLVEFGKDFVIVLEGGLGTRTSVLAAAVYR
Ga0207711_104655353	3300025941	Switchgrass Rhizosphere	QSIQQKVAGSVANTDLQFIVIQTPTKPWNTLLGGLFEFAKDDYVLLEGGLGARTSILAAAVYRF
Ga0207679_106406952	3300025945	Corn Rhizosphere	MHQKIQQEVAGSVADSDLQFIVIQSPQKPWNTLLGGLLEFGKDGYVLLEGGIGERKSILASAVYRF
Ga0207651_103313822	3300025960	Switchgrass Rhizosphere	QQTVAGSVANTDLQFVVVQSPTQPWNTLLGGLFEFGKDGYVLLEGGFGARKSILAAAVYR
Ga0207668_106913843	3300025972	Switchgrass Rhizosphere	QQTVAGAVANTDLQFVVVQSPKQPWNTLLGGLLEFGKDGYVLLEGGIGERKSILASAVYR
Ga0207640_102910851	3300025981	Corn Rhizosphere	EVAGSVANTDLQFVVLQSPTQPWNTLLGGLLEFGKDGYILLEGGFGARKSIHASAIYRF
Ga0207703_108368902	3300026035	Switchgrass Rhizosphere	SIQQEVAGSVADTDLQFIVIQSPTKPWNALLGGLLEFGKDWMVLAEGGLGARKSILASAVYRF
Ga0207703_110135471	3300026035	Switchgrass Rhizosphere	HAIVGPNMGGAVWAGAMHQKIQQEVAGSVADTDLQFIVLQSPQKPWNALLGGLLEFGKDWVVLTEGGFGARKSILAAAMYRF
Ga0207641_108261861	3300026088	Switchgrass Rhizosphere	TVAGSVADTDLQFAVIQSPTQPWNTLLGGLIEFGKDGYILVEGGLGARKSILAAAVYRF
Ga0207648_100340801	3300026089	Miscanthus Rhizosphere	QKIQQEVAGSVADTDLQFIVIQSPQKPWNALLGGLLEFGKDWVILTEGGLGARKSILAAAAYRF
Ga0207648_120344771	3300026089	Miscanthus Rhizosphere	AGSVANTDLQFIVLQSPTQPWNTLLGGLLEFGKDGYILLEGGLGARKSILASAIYRF
Ga0207675_1024870091	3300026118	Switchgrass Rhizosphere	LQFIVVQSPTKTWNTLLGGLIEFGKDGYVLLEGGLGARMSILGAAVYRF
Ga0207683_116045002	3300026121	Miscanthus Rhizosphere	QQKVAGSVANTDLQFIVIQTPTKPWNTLLGGLFEFAKDGYVLLEGGLGARTSILAAAVYR
Ga0268266_118894061	3300028379	Switchgrass Rhizosphere	IQQTVAGAVADTDLQFVVVQSPKQPWNTLLGGLLEFGKDGYVLLEGGIGERKSILASAVYRF
Ga0268265_102482581	3300028380	Switchgrass Rhizosphere	TDLQFAVIQSPTQPWNTLLGGLIEFGKDGYILVEGGLGARKSILAAAVYRF
Ga0268265_102588723	3300028380	Switchgrass Rhizosphere	QEVAGSVANTDLQFVVLQSPTQPWNTLLGGLLEFGKDGYILLEGGFGARKSILASAIYRF
Ga0247828_104264681	3300028587	Soil	QEIQPTVAGSVAGTDLQVVDVQSPQQPWNTLLGALLEFGKQGYVLLEGGIGERKSILASAVYRF
Ga0247822_112715371	3300028592	Soil	TDLQFVVVQSPKQPWNTLLGALLEFGKQGYVLLEGGIGERKSILASAVYRF
Ga0307503_107009532	3300028802	Soil	KIQETVAGNVADTDLQFIVVQSPKEPWNMLLGGLIEFGRNGYVLLEGGVGERKSILAAAVYRF
Ga0307498_101291283	3300031170	Soil	AGAVANSDLQFAVVQSPQQPWNTLLGGLVEFGRAGYFLVEGGLGARKSLLLAGVYRF
Ga0307506_102970631	3300031366	Soil	VANTDLQFIVMQSPTKPWNTLLGGLVEFGKKGYLLIEGGFGDRTSVLAAAVYRF
Ga0318509_104323961	3300031768	Soil	MYQRIQQEVAGSVANTDLQFIVVQSAAKPWNTLVGGLLEFDKEFGLLLEGGFGGRMSILAQI
Ga0307410_119484112	3300031852	Rhizosphere	SMGAAVWLGAMHQKIQETVAGSVDDTDLQFVVVQSPAQPWNALLGGLLEFGKDGYVLLEGGLGQRTSILVSAVYRF
Ga0310900_114027992	3300031908	Soil	MYQRIQQEVAGSVADTDLQFIVVQSPVKPWNTLVGGLVEFGKDFVFILEGGLGERKSILGAAVYRF
Ga0308175_1003183911	3300031938	Soil	TGAMYQRIQQTVAGGVANTDLQFVVVQSPSKPWNMLLGGLVEFGKDFVVLLEGGVGARTSILAGAVYRF
Ga0308176_102649981	3300031996	Soil	MHQSIQQKVAGSVAGTDLDFIVVQSPSNPWNTLLGGLVEFGRSGYVLLEGGVGARKSILAAAVYRF
Ga0310899_104116731	3300032017	Soil	ADTDLQFAVIQSPTQPWNTLLGGLIEFGKDGYILVEGGLGARKSILAAAVYRF
Ga0308173_109218572	3300032074	Soil	SMGAGVWIGAMHQRIQQTVAGSVANTNLQFAVVQSPTNPWNMILGGLIEFGNDFSALIEGGVGDRKSVLAAVVYRF
Ga0307470_105352821	3300032174	Hardwood Forest Soil	SVANTDLQFVVVQSPTQPWNTLLGGLFEFGKDGYVLLEGGFGARKSILAAAVYRF
Ga0307470_118201091	3300032174	Hardwood Forest Soil	KIQQEVAGSVADTDLQFIVIQSPQKPWNALLGGLLEFGKDWVVLAEGGLGARKSILAAAVYRF
Ga0307471_1009682883	3300032180	Hardwood Forest Soil	GAMHQKIQQTVAGSVADTDLQFVVVQSPVQPWNTLLGGLFEFGKAGYVLLEGGVGERKSILAAAVYRF
Ga0247829_108095951	3300033550	Soil	TDLQFAVIQSPTQPWNTLLGSLIEFGKDGYILVEGGLGARKSILAAAVYRF
Ga0364929_0109977_1_174	3300034149	Sediment	AGSVADTDLQFIVIQSPQKPWNTLLGGLLEFGKDWVVLAEGGLGARKSILAAAMYRF
Ga0373950_0106796_10_210	3300034818	Rhizosphere Soil	MHQSIQQKVAGSVANTDLQFIVIQTPTKPWNTLLGGLFEFGKDGYVLLEGGLGARTSILAAAVYRF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082830

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences