Metagenome / Metatranscriptome Family F082827

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082827
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	85 residues
Representative Sequence	MKATRYLLAAMVLGTAIGASQANAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDAGNVIADAGPSFT
Number of Associated Samples	105
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.86 %
% of genes near scaffold ends (potentially truncated)	96.46 %
% of genes from short scaffolds (< 2000 bps)	88.50 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.646 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.354 % of family members)
Environment Ontology (ENVO)	Unclassified (31.858 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.903 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 18.52% β-sheet: 5.56% Coil/Unstructured: 75.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13193	AMP-binding_C	19.47
PF00535	Glycos_transf_2	2.65
PF04191	PEMT	2.65
PF03379	CcmB	1.77
PF13715	CarbopepD_reg_2	1.77
PF12697	Abhydrolase_6	1.77
PF00593	TonB_dep_Rec	1.77
PF16177	ACAS_N	0.88
PF07715	Plug	0.88
PF00005	ABC_tran	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2386	ABC-type transport system involved in cytochrome c biogenesis, permease component	Posttranslational modification, protein turnover, chaperones [O]	1.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.65 %
Unclassified	root	N/A	20.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.65 %
Unclassified	root	N/A	20.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.65 %
Unclassified	root	N/A	20.35 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	69.91 %
Unclassified	root	N/A	20.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	69.03 %
Unclassified	root	N/A	20.35 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	63.72 %
Unclassified	root	N/A	20.35 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.88 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.88 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.88 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	60.18 %
Unclassified	root	N/A	20.35 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	3.54 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.88 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.88 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.88 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	60.18 %
Unclassified	root	N/A	20.35 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	3.54 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.88 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.88 %
Brevundimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	0.88 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	60.18 %
Unclassified	root	N/A	20.35 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	3.54 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.88 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.88 %
unclassified Brevundimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas	0.88 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	60.18 %
Unclassified	root	N/A	20.35 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	3.54 %
Pseudomonas sp. GM60	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GM60	0.88 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.88 %
Segetibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Segetibacter	0.88 %
Brevundimonas sp. BAL3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. BAL3	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	60.18 %
Unclassified	root	N/A	20.35 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	3.54 %
Segetibacter koreensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Segetibacter → Segetibacter koreensis	0.88 %
Pseudomonas sp. GM60	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GM60	0.88 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.88 %
Brevundimonas sp. BAL3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. BAL3	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig140472	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1102	Open in IMG/M
2124908041\|P3_CLC_ConsensusfromContig12605	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	881	Open in IMG/M
2140918007\|ConsensusfromContig151752	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	739	Open in IMG/M
3300000880\|AL20A1W_1266154	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	653	Open in IMG/M
3300001160\|JGI12654J13325_1013163	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	595	Open in IMG/M
3300001593\|JGI12635J15846_10653699	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	608	Open in IMG/M
3300001661\|JGI12053J15887_10243459	Not Available	897	Open in IMG/M
3300004081\|Ga0063454_100378558	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	934	Open in IMG/M
3300004153\|Ga0063455_100183716	Not Available	1011	Open in IMG/M
3300005093\|Ga0062594_100185457	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1426	Open in IMG/M
3300005093\|Ga0062594_101605372	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	674	Open in IMG/M
3300005177\|Ga0066690_10677636	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	685	Open in IMG/M
3300005186\|Ga0066676_10755829	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	661	Open in IMG/M
3300005186\|Ga0066676_11029219	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	546	Open in IMG/M
3300005294\|Ga0065705_10403358	Not Available	880	Open in IMG/M
3300005328\|Ga0070676_10383893	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	973	Open in IMG/M
3300005328\|Ga0070676_10906420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GM60	657	Open in IMG/M
3300005330\|Ga0070690_100126557	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1721	Open in IMG/M
3300005337\|Ga0070682_100702546	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	811	Open in IMG/M
3300005343\|Ga0070687_100681263	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	716	Open in IMG/M
3300005355\|Ga0070671_100353894	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1254	Open in IMG/M
3300005367\|Ga0070667_101091254	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	746	Open in IMG/M
3300005446\|Ga0066686_10132862	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300005457\|Ga0070662_101142908	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	669	Open in IMG/M
3300005458\|Ga0070681_11296441	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	651	Open in IMG/M
3300005536\|Ga0070697_100317207	Not Available	1342	Open in IMG/M
3300005536\|Ga0070697_101084395	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Segetibacter → Segetibacter koreensis	713	Open in IMG/M
3300005544\|Ga0070686_100047665	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2710	Open in IMG/M
3300005545\|Ga0070695_100429414	Not Available	1008	Open in IMG/M
3300005545\|Ga0070695_101555298	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	551	Open in IMG/M
3300005546\|Ga0070696_100205873	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300005569\|Ga0066705_10368858	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300005614\|Ga0068856_101892878	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	608	Open in IMG/M
3300005719\|Ga0068861_100346914	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300006237\|Ga0097621_102094754	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	541	Open in IMG/M
3300006755\|Ga0079222_10117607	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1439	Open in IMG/M
3300006800\|Ga0066660_11328023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp. BAL3	563	Open in IMG/M
3300007265\|Ga0099794_10458781	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	669	Open in IMG/M
3300009176\|Ga0105242_12057534	Not Available	614	Open in IMG/M
3300010159\|Ga0099796_10186692	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	835	Open in IMG/M
3300010322\|Ga0134084_10161318	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	761	Open in IMG/M
3300010371\|Ga0134125_12417071	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	571	Open in IMG/M
3300010400\|Ga0134122_12552634	Not Available	561	Open in IMG/M
3300010403\|Ga0134123_12692325	Not Available	565	Open in IMG/M
3300012004\|Ga0120134_1003769	Not Available	2082	Open in IMG/M
3300012200\|Ga0137382_10719963	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	716	Open in IMG/M
3300012202\|Ga0137363_11731777	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	517	Open in IMG/M
3300012203\|Ga0137399_11135474	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	658	Open in IMG/M
3300012205\|Ga0137362_10725091	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	854	Open in IMG/M
3300012209\|Ga0137379_10232451	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300012211\|Ga0137377_10709854	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	940	Open in IMG/M
3300012517\|Ga0157354_1088015	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	514	Open in IMG/M
3300012910\|Ga0157308_10312754	Not Available	580	Open in IMG/M
3300012922\|Ga0137394_11238580	Not Available	610	Open in IMG/M
3300012930\|Ga0137407_12332506	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	511	Open in IMG/M
3300012955\|Ga0164298_11478699	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	529	Open in IMG/M
3300012957\|Ga0164303_11439951	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	517	Open in IMG/M
3300012961\|Ga0164302_10462559	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	885	Open in IMG/M
3300013100\|Ga0157373_10895692	Not Available	658	Open in IMG/M
3300013772\|Ga0120158_10112902	Not Available	1597	Open in IMG/M
3300014054\|Ga0120135_1012130	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	977	Open in IMG/M
3300014166\|Ga0134079_10019496	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2173	Open in IMG/M
3300014487\|Ga0182000_10373567	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	623	Open in IMG/M
3300015054\|Ga0137420_1396345	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1079	Open in IMG/M
3300015357\|Ga0134072_10216226	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	672	Open in IMG/M
3300015357\|Ga0134072_10306865	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	594	Open in IMG/M
3300017657\|Ga0134074_1369948	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	531	Open in IMG/M
3300017695\|Ga0180121_10201123	Not Available	740	Open in IMG/M
3300018000\|Ga0184604_10230849	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	644	Open in IMG/M
3300018429\|Ga0190272_10205988	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1427	Open in IMG/M
3300018432\|Ga0190275_11089613	Not Available	872	Open in IMG/M
3300018468\|Ga0066662_12119711	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	589	Open in IMG/M
3300018482\|Ga0066669_10029256	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3226	Open in IMG/M
3300019869\|Ga0193705_1009149	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2164	Open in IMG/M
3300019880\|Ga0193712_1081848	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	703	Open in IMG/M
3300019887\|Ga0193729_1053406	Not Available	1635	Open in IMG/M
3300019888\|Ga0193751_1034356	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2336	Open in IMG/M
3300020001\|Ga0193731_1014591	Not Available	2033	Open in IMG/M
3300020004\|Ga0193755_1029176	Not Available	1827	Open in IMG/M
3300020004\|Ga0193755_1183490	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	611	Open in IMG/M
3300020018\|Ga0193721_1005046	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3438	Open in IMG/M
3300021078\|Ga0210381_10259707	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	619	Open in IMG/M
3300021080\|Ga0210382_10256928	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	765	Open in IMG/M
3300021411\|Ga0193709_1090516	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	670	Open in IMG/M
3300022756\|Ga0222622_10325948	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1064	Open in IMG/M
3300025505\|Ga0207929_1000744	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	8758	Open in IMG/M
3300025906\|Ga0207699_11279175	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	543	Open in IMG/M
3300025907\|Ga0207645_10339661	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1004	Open in IMG/M
3300025911\|Ga0207654_10836555	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	666	Open in IMG/M
3300025921\|Ga0207652_10543788	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1044	Open in IMG/M
3300025927\|Ga0207687_11277087	Not Available	631	Open in IMG/M
3300025960\|Ga0207651_11954404	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	527	Open in IMG/M
3300026118\|Ga0207675_101895601	Not Available	615	Open in IMG/M
3300026324\|Ga0209470_1334580	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	547	Open in IMG/M
3300026542\|Ga0209805_1125762	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300027587\|Ga0209220_1178802	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	543	Open in IMG/M
3300027645\|Ga0209117_1039622	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1436	Open in IMG/M
3300027678\|Ga0209011_1044768	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300027765\|Ga0209073_10132140	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	908	Open in IMG/M
3300027846\|Ga0209180_10299211	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	922	Open in IMG/M
3300027882\|Ga0209590_10594783	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	712	Open in IMG/M
3300028047\|Ga0209526_10128003	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300028047\|Ga0209526_10276127	Not Available	1143	Open in IMG/M
3300028705\|Ga0307276_10111010	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	671	Open in IMG/M
3300028715\|Ga0307313_10242144	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	560	Open in IMG/M
3300028807\|Ga0307305_10022168	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2861	Open in IMG/M
3300028810\|Ga0307294_10262960	Not Available	616	Open in IMG/M
3300028814\|Ga0307302_10405912	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	674	Open in IMG/M
3300028828\|Ga0307312_10010409	All Organisms → cellular organisms → Bacteria	5118	Open in IMG/M
3300028878\|Ga0307278_10033367	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2351	Open in IMG/M
3300031093\|Ga0308197_10447141	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	517	Open in IMG/M
3300032180\|Ga0307471_102347911	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	673	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.73%
Host-Associated	Host-Associated	13.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.30%
Plants	Host-Associated → Plants	13.27%
Aquatic	Environmental → Aquatic	4.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.73%
Freshwater	Environmental → Aquatic → Freshwater	2.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.65%
Sediment	Environmental → Aquatic → Sediment	1.77%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.83%
Loam	Environmental → Terrestrial → Soil → Loam	19.47%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.77%
Ice	Environmental → Aquatic → Freshwater → Ice	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	7.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.19%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.42%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	2.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.65%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2124908041	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300001160	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2	Environmental	Open in IMG/M
3300001333	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014054	Permafrost microbial communities from Nunavut, Canada - A34_5cm_12M	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_01836080	2124908032	Soil	MSATRYLLAAMVLGSAISVTQANAQCSGNAGGCLTVNTASATVNALVKLGMSATTSTLSSPTADQVEIGATLADAGPSFTIKANRSWTLNIPISRQPSEYFARDQNPSTFSL
P3_CLC_01620460	2124908041	Soil	MVLGTALGASQANAQCSGNAGGCLTVNTASATVNALVKLGMSATTSTLSSPTADQVEIGATLADAGPSFTIKANRSWTLNIPISRQPSEYFARDQNPSTFSL
A_all_C_02569230	2140918007	Soil	MRATRSLLAAMVLGTAIGASQANAQCSSNTGSCNTTNTASVTVGALVKLDMSANTTALTNPSVSDVETGNILANAGPTFTIKANRSWNLK
AL20A1W_12661542	3300000880	Permafrost	MSATRYLLAAMVLGSAISATQANAQCSGNAGGCLTVNTASATVNALVKLGMSGTTSTLSSPTADQVEIGATLADAGPTFTIKANRSWTLNIRTSN
JGI12654J13325_10131631	3300001160	Forest Soil	MKATRLLLAAMVFGTVIGASQANAQGCSGANSCAGTNTAQVIVPALVKLAMTSNTTSLTAPTADQVDLGATVGPDAGPTFTIKANRSWTLNIRSGNPTNWTYTGANSGV
A21PFW6_13225802	3300001333	Permafrost	MKATRSLLAAMVLGTAICAGQANAQGCSGNAGTCNTTHTASVTVGSLVKLIMSSATTTLTAPLADDINTGAVIPDNGPTFTIKSNRAWDLKIKAQPAVAGLWDYSGTDAGQXXXXLQRSPRVT*
JGI12635J15846_106536991	3300001593	Forest Soil	MNATRFLLPAVVVASVFGANQAEAQCSGSGSCNTTNTASVIVNALVKLGMGSTTTSLTSPTADQVEIGAVVPDNGPTFTIKANRSWTLNIKTTNA
JGI12053J15887_102434592	3300001661	Forest Soil	MKATRILLAAMVFGTVIGANKANAQNCGGIGSCNLTNTASVAVGALVKLTMSSATTTLTPPSASDL
Ga0063454_1003785582	3300004081	Soil	MKATRSLLAAMVVATAIRATQVNAQCSGNAGSCNTTNTASVTVGALVKLGMSSNTTALTNPTADQVDAGTALDNVGPVFSVKANRSWTL
Ga0063455_1001837161	3300004153	Soil	MKATRSILAAMVLATAIGATQANAQCSGNAGSCNTTNTASVTVGALVKLGMSSNTTALTNPTADDVDAGNVIADAGPTFSV
Ga0062594_1001854571	3300005093	Soil	MKATRSLLAAMVLATAIGASQAAAQCSGNGGSCNTTNTASVTVGALVKLGMSSATTNLTNPTADDVDAGNVIADAGPSFTI
Ga0062594_1016053721	3300005093	Soil	MNATRFILAAMVIGSAICVNQASAQCSGNGSCNLTNTVSASVNNLVKLQMTSATTSLSSPTADQVETGVTLADNGPSFTIKANRSWTLNIK
Ga0066690_106776361	3300005177	Soil	MNATRIMLAAMVLGAAISVEKAGAQNCSGNAGSCNTTNTASVSVNALVKLGMNSAATTLTAPTADQVEIGANIADVGPNFTIKANRSWTLNIKTTN
Ga0066676_107558291	3300005186	Soil	MNATRSFLAAMVLVFAISANQASAQCSGNAGGCLTVNTASATVNALVKLGMGATATTLSSPTADQIDIGATLADAGPTFTIKANRSWTLNIRTSNASNWTYVGSNGGTK
Ga0066676_110292191	3300005186	Soil	VAGTIKFLGEKITMKATRSLLAAMVLATAIGASQANAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTNLTNPTADDVDAGNVIADAGPSFT
Ga0065705_104033583	3300005294	Switchgrass Rhizosphere	MKATRTLLAAMVLGTAIGAVQANAQCSGNAGTCNTTNTASVTVGALVKLGMSGTTTALTAPTADDIDAGAI
Ga0070676_103838931	3300005328	Miscanthus Rhizosphere	MKATRTLLAAMVLGTAIGASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDGGAVIANSGPTFTIKAN
Ga0070676_109064201	3300005328	Miscanthus Rhizosphere	MKATRSLLAAMVLATAIGASQAAAQCSGNGGSCNTTNTASVTVGALVKLGMSSATTNLTNPTADDVDAGNVIADAGPSFTIKANRSWTLKIKSQN
Ga0070690_1001265573	3300005330	Switchgrass Rhizosphere	MKATRNLLAAMVLGTAICASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIPNAGPTFTIKANRSW
Ga0070682_1007025461	3300005337	Corn Rhizosphere	MKATRYLLAAMVLGTAIGASQANAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDAGNVIADAGPSFT
Ga0070687_1006812632	3300005343	Switchgrass Rhizosphere	MKATRNLLAAMVLGTAICASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSAATTTLTNPTADDVDAGNTIADAGPSFTVKSNR
Ga0070671_1003538942	3300005355	Switchgrass Rhizosphere	MKATRTLLAAMVLGTAIGASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDGGAVIANSGPTFTIKANRSWTL
Ga0070667_1010912541	3300005367	Switchgrass Rhizosphere	MKATRNLLAAMVLGTAICASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIPNAGPTFTIKANRS
Ga0066686_101328622	3300005446	Soil	MNATRSFLAAMVLGSAISVSQANAQCSGNAGGCLTVNTASATVNALVKLGMSATATTLSSPTADQVDIGATLAD
Ga0070662_1011429081	3300005457	Corn Rhizosphere	MTATRSILAAMVLGAAISVNQAGAQCSGNAGSCNTTNTASVSVNALVKLGMSSATTTLTSPTADQIEVGANIADNGPTFTVKANRSWSL
Ga0070681_112964411	3300005458	Corn Rhizosphere	MKATRTLLAAMVLGTAIGASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDGGAVIANSGPTFTIKANRSWTLKIKSQ
Ga0070697_1003172071	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKATRNLLAAMVLGTIITASQANAQCSGNAGSCNTTNTASVTVGALVKLGMSAATTSLTSPTADDIDVGAVLANAGPSFTIKAN
Ga0070697_1010843951	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKATRYLLAAMVLGTAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIADAGPSFTIKANRSWTLKIKSQNA
Ga0070686_1000476651	3300005544	Switchgrass Rhizosphere	MKATRNLLAAMVLGTAICASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIANAGPTFTIKANRSWTLKIKSQNATNWTYVGSDAGVKPIG
Ga0070695_1004294141	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MKATRSLLAAMVLATAIGASQAAAQCSGNGGSCNTTNTASVTVGALVKLGMSSATTNLTNPTADDVDAGNVIADAGPSF
Ga0070695_1015552981	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MNANRFLLAALVLGSLAGANQANAQCSGNAGGCLTINTASATVNALVKLGMSATTTTISSPTADQVDIGATIA
Ga0070696_1002058731	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MNATRYVLAAMVFGAAISVNQAGAQCSGNAGSCNTTNTASVSVNALVKLGMSSATTSLTSPTADQVEVGANIADAGPSF
Ga0066705_103688582	3300005569	Soil	MKATRSLLAAMVLATAIGARTANAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIADAG
Ga0068856_1018928781	3300005614	Corn Rhizosphere	MSATRYLLAAMVLGSAISATQANAQCSGNAGGCLTVNTASATVNALVKLGMSGTTTTLTSPTADQVEVGA
Ga0068861_1003469141	3300005719	Switchgrass Rhizosphere	MKATRNLLAAMVLGTAICASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIPNAGPTFTIKANRSWTLKIKSQ
Ga0097621_1020947542	3300006237	Miscanthus Rhizosphere	MKATRTLLAAMVLGTAIGASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTDPTANDVDA
Ga0079222_101176073	3300006755	Agricultural Soil	MNATRYVLAAMVLGTAIGANQANAQCSGNAGSCNSTNTVSATVNALVKLGMSAATTTLTSPTADQVEVGANIADAGPTFTIKA
Ga0066660_113280231	3300006800	Soil	MNATRIMLAAMVLGAAISVNKAGAQNCSGNAGSCNTTNTASVSVNALVKLGMNSAATTLTAPTADQVEIGANIADVGPNFTIKANRSWTLNIKTTNPSTW
Ga0099794_104587811	3300007265	Vadose Zone Soil	MKATRFLLAAMVLGSAISVSQANAQCSGNAGGCLTVNTASATVNALVKLGMSATTTTLSSPTADQVEVGALLADVGPTFTVKANRSWTLNVRTSNPAN
Ga0105242_120575342	3300009176	Miscanthus Rhizosphere	MNATRFILAAMVIGSAICVNQAEAQCSGNGSCNLTNTVSASVNNLVKLQMTSATTTLSSPTADQVET
Ga0099796_101866921	3300010159	Vadose Zone Soil	MNATRLLMAALVLGTAIAGNKASAQCSGNAGSCNTTNTASATVNALVKLGMSGTATTLTSPTADQIEIGASIPDNGPTFTIKANRSWSLNVKTTAV
Ga0134084_101613181	3300010322	Grasslands Soil	MKATRFLLAAMVLATAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIADAGPSFTIKAN
Ga0134125_124170711	3300010371	Terrestrial Soil	MNATRFLLAAMVLGSAISVNQAGAQCSGNAGSCNTTNTASVSVNNLVKLGMGSATTSLTSPTADQVEVGATI
Ga0134122_125526341	3300010400	Terrestrial Soil	MNATRFVLAAMVLGTAISANQAGAQCSGNAGGCLTINTASATVNALVKLGMSATTTTLSSPTADQVDVGATLAD
Ga0134123_126923251	3300010403	Terrestrial Soil	MNATRFVLAAMVLGTAISANQAGAQCSGNAGGCLTINTASATVNALVKLGMSATTTTLSSPTADQVDVG
Ga0120134_10037691	3300012004	Permafrost	MKATRLLLAAMVLGTAIGASQANAQCSSVGATGTCSTTNTAQVVIPSLVKLGMGATTTSLTAPSADDVDAGTPIDDAGPALSIK
Ga0137382_107199631	3300012200	Vadose Zone Soil	MRATRSLLAAMVLGTATGASQANAQCSGNAGTCNTTNVASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIANDGPSFTIKANRSWTL
Ga0137363_117317771	3300012202	Vadose Zone Soil	MNATRLILAAMVLGSAIGVNQANAQCSGNAGGCLTVNTASATVNALVKLGMSAATTTLSSPTADQFEIGATLADAGP
Ga0137399_111354741	3300012203	Vadose Zone Soil	MVLATAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSATTSLTNPTADQVDAGTAIDN
Ga0137362_107250912	3300012205	Vadose Zone Soil	MRATRSLLAAMVLGTAIGASQANAQCSGNAGTCNTTNVASVTVGALVKLGMSSATTSLTNPTADDVDAGNVISDAGPSFTIKANRSWTLKIK
Ga0137379_102324513	3300012209	Vadose Zone Soil	MNATRFLLAAMVLGSAISVSQANAQCSGNAGGCLTVNTASATVNALVKFGMSATTSTLSSPTADQVDIGATLADAGP
Ga0137377_107098542	3300012211	Vadose Zone Soil	MKATRLLAAMVLGTAIGASQANAQCSGNAGSCNTTNTASVTVGALVKLGMTSATTALTNPSADQVDAGLALDNAGPSFTIKANRSWTLKIKASPAVAGF
Ga0157354_10880151	3300012517	Unplanted Soil	LEQKKMNATRFILAAMVLGSAISVNQAGAQCSGNAGSCNTTNTVTASVNALVKLGMSSAATTLASPTADQVEIGATLADAGPSFTIKANRSWSLNIK
Ga0157308_103127541	3300012910	Soil	MKATRNLLAAMVLGIAICASQASAQCSGNAGSCNTTSTASVTVGALVKLGMSSATTSLTNPTADDVDAGN
Ga0137394_112385801	3300012922	Vadose Zone Soil	MKATRFLLAAMVLGSAISVSQASAQCSGNAGGCLTVNTASATVNALVKLGMSATTTTLSSPTADQVEVGALLADVGPTFTVKA
Ga0137407_123325061	3300012930	Vadose Zone Soil	LEQKEMNATRLILAAMVLGSAIGVNQADAQCSGNAGSCNTTNTASVSVNALVKLGMSSATTTLTSPTADQVEVGANIADGGP
Ga0164298_114786991	3300012955	Soil	MKATRSLLAAMVLATALGAIQANAQCSGNAGSCNTTNTASVTGGTLVKLGMSSSATALTNPTADDVDAGNVLADAGPIFSI
Ga0164303_114399511	3300012957	Soil	LEQKTMNATRFILAAMVLGSAISVNQAGAQCSGNAGSCNTTNTVTASVNALVKLGMSSAATTLASPTADQVEIGATLADAGPSFTI
Ga0164302_104625591	3300012961	Soil	MNATRIVLAAMVLGTAIGANQANAQCSGNAGSCNSTNTVSATVNALVKLGMSAATTTLSSPTADQVEIGANLADAGPTFTIKANR
Ga0157373_108956922	3300013100	Corn Rhizosphere	MNATRFILAAMVIGSAICVNQAEAQCSGNGSCNLTNTVSASVNNLVKLQMTSATTTLSSPTADQVETGV
Ga0120158_101129021	3300013772	Permafrost	MVLGTAIGASQANAQCSGSAGTCNTTNTASVTVGALVKLGMSSAATALTNPTADDVDAGNVIAD
Ga0120135_10121303	3300014054	Permafrost	MNANRFLIAALVLGSLAGANQANAQCSGNAGGCLTINTASATVNALVKLGMSGTTTALSSPTADQVDIGATLADGGPTFTIKANR
Ga0134079_100194962	3300014166	Grasslands Soil	MKATRSLLAAMVLATAIGARTANAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIADAGPSFTIKANRSWTLKIKSQ
Ga0182000_103735671	3300014487	Soil	MNATRFLLAAMVLGTAIGVNQANAQCSGNAGSCNSTNTVSATVNPLVKLGMSAVTTTLSSPTADQIDVGATLADAGPTFTIK
Ga0137420_13963452	3300015054	Vadose Zone Soil	MKATRSLLAAMVLGTAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSAATALTNPTADDVDAGNVLADAGPSFTVKVNRSWTLKI
Ga0134072_102162262	3300015357	Grasslands Soil	MNATRFILAAMVLGSAISVNQAGAQCSGNAGSCNTTNTASVSVNALVKLGMSSATTTLTSPTADQVEV
Ga0134072_103068651	3300015357	Grasslands Soil	MKATRFLLAAMVLATAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSAATSLTNPTADDVDAGNVIANDGPS
Ga0134074_13699481	3300017657	Grasslands Soil	MVLGTAIGVSQANAQCSGNAGSCNTTNTASVTVGALVKLGMSSAATSLTNPTADDVDAGNVIANDGPS
Ga0180121_102011231	3300017695	Polar Desert Sand	MTSTRFVLAAMVLGTALVSNQANAQCSSNVGSCNTTNTASVSVGALVKLGMSSATTSLTAPTADDIDAGAVLQKAGPIFTIK
Ga0184604_102308491	3300018000	Groundwater Sediment	MKATRILAAMVLGTAIGAVQANAQCSGNAGTCNTTNTASVTVGALVKLGMSGTTTALTAPTADDIDVGAVIPNAGPTF
Ga0190272_102059882	3300018429	Soil	MNSTRFILAAMVLGTALGSKQANAQGCIGLGACSATNTASVSVGALVKLDMSSATTSLTSPDADDIDAGATLQDAGPTFTIKANRSWSLKIKSGNA
Ga0190275_110896132	3300018432	Soil	MNSTRFVLAAMVLGTALGSTKAYAQGCIGTGSCSATNTASVTVGALVKLGMSSATTTLSNPTADDIDAGATRQDAGPTFTIKAN
Ga0066662_121197111	3300018468	Grasslands Soil	MNATRSFLAAMVLVFAISANQASAQCSGNAGGCLTVNTASATVNALVKLGMSATATTLSSPTADQVDIGAT
Ga0066669_100292563	3300018482	Grasslands Soil	MKATRSLLAAMVLATAIGARTANAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTSLTNPTADDVDAGNVIAD
Ga0193705_10091491	3300019869	Soil	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMSGVATSLTSPTADQIEAGALIADGGPTFTIKANRSWTLNIKT
Ga0193712_10818481	3300019880	Soil	MNTTRILLAAMVLGSAIGATQANAQCSGNAGGCLTINTASATVNALVKLGMSATTTTLSSPTADQVEIGALLADAGPTFTVKANRSW
Ga0193729_10534064	3300019887	Soil	MKATRFLLAAMVLGSAISVSQANAQLQCSGNAGGCLVVNTASATVNALVKLTMSATTTTLSSPTADQIET
Ga0193751_10343562	3300019888	Soil	MRATRSLLAAMVLGTAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSAATTLTNPTADDVDAGNVLANDGPSFTVKANRSWTLKIKSQN
Ga0193731_10145914	3300020001	Soil	MKATRFLLAAMVLGSAISASQANAQLQCSGNAGGCLVVNTASATVNALVKLTMSATTTTLSSPTADQIETGAVLADLGPT
Ga0193755_10291761	3300020004	Soil	MNATRTLLAAMVLGTAIGAVQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSNATALTNPTADNVDAG
Ga0193755_11834901	3300020004	Soil	MNATRFLLAAMVLGTAIAGNQANAQCSGNAGSCFTTNTASATVNALVKLGMGGVATTLTSPTADQIEIGASIANDGPTFTIKANRSWTLNIKTTAVSNWVYVGSFSGTKPISD
Ga0193721_10050462	3300020018	Soil	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMSGVATSLTSPTADQIEAGAL
Ga0210381_102597071	3300021078	Groundwater Sediment	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMSATTTALTAPTADDIDAG
Ga0210382_102569281	3300021080	Groundwater Sediment	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMSGVATSLTSPTADQIEAGALIADGGPTFTIKANRSW
Ga0193709_10905162	3300021411	Soil	MNTTRILLAAMVLGSAIGATQANAQCSGNAGGCLTINTASATVNALVKLGMSATTTTLSSPTADQVEIGALLADAGPTFTVKANRS
Ga0222622_103259481	3300022756	Groundwater Sediment	MNATRFLLAAMVLGTAIGVEQVSAQCSGNAGSCNTTNTASVSVNALVKLGMSGVATSLTSPTADQIEAGAVIADAGPTFTIKANRSWTLNLKTTNPTIWT
Ga0207929_10007448	3300025505	Arctic Peat Soil	MSATRYLLAAMVLGSAISVTQANAQCSGNAGGCLTVNTASATVNALVKLGMSATTSTLSSPIADQVEIGTTLADAGPSFTIKANRSWTLNIPISRQPSEYFARDQNPSTFSL
Ga0207699_112791751	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKATRYLLAAMALGTAIGASEANAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDAGNVIADAGPT
Ga0207645_103396611	3300025907	Miscanthus Rhizosphere	MKATRTLLAAMVLGTAIGASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDGGAVIANSGPTFTIKANRSWTLKIK
Ga0207654_108365551	3300025911	Corn Rhizosphere	MKATRTLLAAMVLGTAIGASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDAGNVIANAGPSFTI
Ga0207652_105437882	3300025921	Corn Rhizosphere	MKATRTLLAAMVLGTAIGASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVDAGNVIANAGPSFTIKANRSWTLKIKSQNAANW
Ga0207687_112770871	3300025927	Miscanthus Rhizosphere	MNATRFILAAMVIGSAICVNQAEAQCSGNGSCNLTNTVSASVNNLVKLQMTSATTTLSSPTADQVETGVTLADNGPSFTIKANR
Ga0207651_119544041	3300025960	Switchgrass Rhizosphere	MSATRYLLAAMVLGSAISATQANAQCSGNAGGCLTVNTASATVNALVKLGMSGTTTTLTSPTADQVEVGATLADAGPS
Ga0207675_1018956011	3300026118	Switchgrass Rhizosphere	MNATRYVLAAMVFGAAISVNQAGAQCSGNAGSCNTTNTASVSVNALVKLGMSSATTSLTSPTADQVEV
Ga0209470_13345801	3300026324	Soil	MNATRSFLAAMVLVFAISANQASAQCSGNAGGCLTVNTASATVNALVKLGMGATATTLSSPTADQIDIGATLADAGPTFTIKANRSWTLNIRTSNASNWTYVGS
Ga0209805_11257621	3300026542	Soil	MNATRFLLAAMVLGSAISVNQAGAQCSGNAGSCNTTNTASVSVNALVKLGMGSAATTLTSPTADQVEVGANLAD
Ga0209220_11788021	3300027587	Forest Soil	MRSTCFTIALCGVFVGAAPARAQCSGNAGTCNTTNTASLLIPALVKLGMSATTTSLTAPTADQVDLGAIIADAGPTFTVKANRSWTLNIKSGNPSNWTYA
Ga0209117_10396222	3300027645	Forest Soil	MNATRFLLPAVVVASVFGANQAEAQCSGSGSCNTTNTASVIVNALVKLGMGSTTTSLTSPTADQVEIGAVVPDNGPTFTIKANRSWTLNIK
Ga0209011_10447681	3300027678	Forest Soil	MKATRLLLAAMVLGTVIGASQSNAQGCSGANSCAGTNTAQVVVPALVKLAMTATTTSLTAPTADQVDLGATVGPDAGPTFTIKANRSWTLNIRSQNLTS
Ga0209073_101321402	3300027765	Agricultural Soil	MNATRFLAAMVLGTAIGVNQANAQCSGNAGSCNSTNTVSATVNALVKLGMSAATTTLSSPTADQVDVGANLADAGPTFTIKANRSWTLNIK
Ga0209180_102992112	3300027846	Vadose Zone Soil	MRATRSLLAAMVLGTAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSAATTLTNPTADDVDAGNVLANDGPSFTIKANRSWTLKIKS
Ga0209590_105947831	3300027882	Vadose Zone Soil	MRATRSLLAAMVLGTAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSAATTLTNPTADDVDAG
Ga0209526_101280034	3300028047	Forest Soil	MKATRILLAAMVFGTVISASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSGVATTLTSPTADDIEAGN
Ga0209526_102761271	3300028047	Forest Soil	MNATRYLLAAVVLGSAISVSQANAQCSGNAGGCLTVNTASATVNALVKLGMSAPATTLSSPTADQVEVGATLSDA
Ga0307276_101110101	3300028705	Soil	MNATRPFLAAMVLVSAIGVTQANAQCSGNAGSCNTTNTASVSVNALVKLGMGSATTSLTSPTADQVEVGANIADAGPNFTIKANRSW
Ga0307313_102421441	3300028715	Soil	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMSGVATSLTSPTADQIEAGALIADGGPTFTIKANRSWTLNI
Ga0307305_100221682	3300028807	Soil	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMSGIATSLTSPTADQIEAGALIADNGPTFTIKANRS
Ga0307294_102629601	3300028810	Soil	MNATRFLLAAMVLGTAIAGNQAYAQTCSGNAGSCNLTNTASATVNALVKLGISGAATTLTSPTADQIETGASIANDGPTFTIKANRSWSLNIKTSAVSNWGYVGSFS
Ga0307302_104059121	3300028814	Soil	MTATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMSGIATSLTSPTADQIEAGAVIADNGPSFTIKANRSWTLNIKTTNPT
Ga0307312_100104095	3300028828	Soil	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMSGVATSLTSPTADQIEAGALIADGGPTFTIKANRSWTLNIKTTNAT
Ga0307278_100333671	3300028878	Soil	MNATRFLLAAMVLGTAIGVEQVNAQCSGNAGSCNTTNTASVSVNALVKLGMGGVATSLTSPTADQIEAGALIADNGPSFTIKANR
Ga0308197_104471411	3300031093	Soil	MKATRTLLAAMVLGTAIGAVQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSNATALTNPTADNVDAGNTLQNSGPTFSVKSNRSWTLKIKSNVATNWDYVGSD
Ga0307471_1023479112	3300032180	Hardwood Forest Soil	MNATRFILAAMVLGSAIGVNQASAQCSGNAGSCNTTNTVSASVNALVKLGMSTAATTLSSPTADQVEVGANLADAGPSFTIKANR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082827

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences