Metagenome / Metatranscriptome Family F082825

Overview

Basic Information

• Family ID: F082825
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 113
• Average Sequence Length: 52 residues
• Representative Sequence: GTSTGGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL
• Number of Associated Samples: 74
• Number of Associated Scaffolds: 113

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.92 %
• % of genes near scaffold ends (potentially truncated): 75.22 %
• % of genes from short scaffolds (< 2000 bps): 82.30 %
• Associated GOLD sequencing projects: 72
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (95.575 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine (29.203 % of family members)
• Environment Ontology (ENVO): Unclassified (98.230 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (76.991 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 1.96%
  β-sheet: 0.00%
  Coil/Unstructured: 98.04%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF05992	SbmA_BacA	26.55
PF01557	FAA_hydrolase	1.77
PF13365	Trypsin_2	1.77
PF08443	RimK	1.77
PF13759	2OG-FeII_Oxy_5	1.77
PF06414	Zeta_toxin	0.88
PF01218	Coprogen_oxidas	0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0408	Coproporphyrinogen-III oxidase HemH, oxygen-dependent	Coenzyme transport and metabolism [H]	0.88

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.58 %
All Organisms	root	All Organisms	4.42 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.58 %
cellular organisms	root	All Organisms → cellular organisms	2.65 %
Viruses	superkingdom	All Organisms → Viruses	1.77 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.58 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.65 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.58 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.65 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.58 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.58 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.88 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.58 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.88 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.58 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.88 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000140|LPfeb09P26500mDRAFT_c1024517	Not Available	641
3300000179|LPjun09P16500mDRAFT_c1006983	Not Available	2181
3300000181|LPjun08P4500mDRAFT_c1032698	Not Available	681
3300000183|LPaug08P20500mDRAFT_c1002863	Not Available	1539
3300000264|LP_A_09_P04_500DRAFT_1025637	Not Available	739
3300002221|JGI24817J26689_1005538	Not Available	2910
3300005402|Ga0066855_10176735	Not Available	689
3300006013|Ga0066382_10323905	Not Available	529
3300006303|Ga0068490_1349418	Not Available	681
3300006304|Ga0068504_1119538	Not Available	2112
3300006304|Ga0068504_1196420	Not Available	776
3300006306|Ga0068469_1117383	Not Available	816
3300006306|Ga0068469_1206577	Not Available	517
3300006308|Ga0068470_1403009	Not Available	709
3300006308|Ga0068470_1483997	Not Available	949
3300006308|Ga0068470_1535564	Not Available	516
3300006309|Ga0068479_1207332	Not Available	568
3300006311|Ga0068478_1202057	Not Available	1055
3300006313|Ga0068472_10548659	Not Available	1113
3300006313|Ga0068472_10569734	Not Available	1603
3300006323|Ga0068497_1172773	Not Available	1593
3300006324|Ga0068476_1378107	Not Available	522
3300006325|Ga0068501_1097533	All Organisms → Viruses → Predicted Viral	2735
3300006325|Ga0068501_1109217	Not Available	742
3300006330|Ga0068483_1315236	Not Available	979
3300006330|Ga0068483_1325331	Not Available	785
3300006331|Ga0068488_1266134	Not Available	1268
3300006331|Ga0068488_1355470	Not Available	911
3300006331|Ga0068488_1603603	Not Available	708
3300006331|Ga0068488_1659689	Not Available	564
3300006336|Ga0068502_1483525	Not Available	926
3300006336|Ga0068502_1897324	Not Available	515
3300006338|Ga0068482_1265328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2801
3300006338|Ga0068482_1489945	Not Available	1028
3300006339|Ga0068481_1354649	Not Available	4062
3300006339|Ga0068481_1460271	Not Available	1584
3300006340|Ga0068503_10443834	Not Available	2065
3300006340|Ga0068503_10492487	Not Available	516
3300006340|Ga0068503_11135280	Not Available	538
3300006341|Ga0068493_10419361	Not Available	1438
3300006341|Ga0068493_10439120	Not Available	779
3300006341|Ga0068493_10442660	Not Available	1406
3300006341|Ga0068493_10606782	Not Available	1185
3300006341|Ga0068493_10610946	Not Available	810
3300006341|Ga0068493_10649978	Not Available	533
3300006347|Ga0099697_1150186	Not Available	2296
3300006347|Ga0099697_1217407	Not Available	655
3300006347|Ga0099697_1367750	Not Available	576
3300006347|Ga0099697_1407346	Not Available	2248
3300006414|Ga0099957_1331651	Not Available	1321
3300006414|Ga0099957_1464193	Not Available	782
3300006414|Ga0099957_1513756	Not Available	531
3300006567|Ga0099958_1246131	Not Available	534
3300006567|Ga0099958_1301243	Not Available	903
3300006736|Ga0098033_1181382	Not Available	585
3300006753|Ga0098039_1170043	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	742
3300006753|Ga0098039_1175212	Not Available	730
3300006902|Ga0066372_10462069	Not Available	742
3300007291|Ga0066367_1297823	Not Available	633
3300009420|Ga0114994_10967433	Not Available	551
3300009425|Ga0114997_10140743	Not Available	1434
3300009595|Ga0105214_104882	Not Available	809
3300009613|Ga0105228_125822	Not Available	542
3300009706|Ga0115002_10550466	Not Available	832
3300009706|Ga0115002_11016972	Not Available	568
3300009791|Ga0105235_107810	Not Available	1341
3300010883|Ga0133547_10081211	Not Available	7317
3300020263|Ga0211679_1029397	Not Available	1049
3300020263|Ga0211679_1043097	Not Available	809
3300021348|Ga0206695_1762681	Not Available	538
3300021352|Ga0206680_10102869	Not Available	1101
3300021442|Ga0206685_10092186	Not Available	996
3300021791|Ga0226832_10182089	Not Available	813
3300025069|Ga0207887_1040073	Not Available	760
3300025241|Ga0207893_1071632	Not Available	500
3300025267|Ga0208179_1013557	Not Available	2464
3300026207|Ga0208895_1077125	Not Available	918
3300027553|Ga0208947_1067411	Not Available	843
3300027668|Ga0209482_1172502	Not Available	620
3300027677|Ga0209019_1009121	Not Available	4117
3300028190|Ga0257108_1080357	Not Available	971
3300028192|Ga0257107_1158370	Not Available	658
3300028488|Ga0257113_1211812	Not Available	562
3300028489|Ga0257112_10108122	Not Available	1007
3300028489|Ga0257112_10214852	Not Available	667
3300031588|Ga0302137_1251730	Not Available	592
3300031598|Ga0308019_10094502	Not Available	1225
3300031625|Ga0302135_10245770	Not Available	755
3300031757|Ga0315328_10819377	Not Available	520
3300031773|Ga0315332_10219972	Not Available	1232
3300031802|Ga0310123_10687176	Not Available	623
3300031804|Ga0310124_10398856	Not Available	818
3300031861|Ga0315319_10036628	Not Available	2229
3300031886|Ga0315318_10160320	All Organisms → cellular organisms → Bacteria → Proteobacteria	1273
3300031886|Ga0315318_10790959	Not Available	529
3300032048|Ga0315329_10003783	Not Available	6205
3300032048|Ga0315329_10169713	Not Available	1139
3300032048|Ga0315329_10504477	Not Available	644
3300032048|Ga0315329_10700086	Not Available	534
3300032088|Ga0315321_10210083	Not Available	1275
3300032130|Ga0315333_10453709	Not Available	604
3300032130|Ga0315333_10607047	Not Available	510
3300032360|Ga0315334_10416857	Not Available	1139
3300032360|Ga0315334_10913313	Not Available	760
3300032820|Ga0310342_100052349	Not Available	3477
3300032820|Ga0310342_100077495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2969
3300032820|Ga0310342_102045348	Not Available	685
3300032820|Ga0310342_102109939	Not Available	674
3300034695|Ga0372840_043942	Not Available	1305

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	79.65%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	15.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.54%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.89%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	34.51%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	29.20%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	15.93%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	15.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.54%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.89%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	29.20%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	18.58%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	15.93%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	15.04%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	6.19%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	4.42%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	2.65%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.65%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.77%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.89%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.89%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.89%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.89%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000140	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - February 2009 P26 500m	Environmental
3300000179	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P16 500m	Environmental
3300000181	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P4 500m	Environmental
3300000183	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P20 500m	Environmental
3300000264	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P04_500	Environmental
3300002221	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_300m	Environmental
3300005402	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73	Environmental
3300006013	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B	Environmental
3300006303	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT234_1_1000m	Environmental
3300006304	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_1000m	Environmental
3300006306	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0500m	Environmental
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental
3300006309	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0500m	Environmental
3300006311	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_1000m	Environmental
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental
3300006323	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0500m	Environmental
3300006324	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500m	Environmental
3300006325	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500m	Environmental
3300006330	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_1000m	Environmental
3300006331	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000m	Environmental
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental
3300006347	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000m	Environmental
3300006414	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500m	Environmental
3300006567	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0770m	Environmental
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental
3300007291	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A	Environmental
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental
3300009595	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500	Environmental
3300009613	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3737_250	Environmental
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental
3300009791	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3819_2500	Environmental
3300010883	western Arctic Ocean co-assembly	Environmental
3300020263	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX555942-ERR599125)	Environmental
3300021348	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015 (Metagenome Metatranscriptome)	Environmental
3300021352	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015	Environmental
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental
3300021443	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015	Environmental
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental
3300025069	Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)	Environmental
3300025241	Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)	Environmental
3300025267	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)	Environmental
3300026207	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82 (SPAdes)	Environmental
3300027553	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_04_M0_20 (SPAdes)	Environmental
3300027668	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)	Environmental
3300027677	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_300m (SPAdes)	Environmental
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental
3300028488	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1320m	Environmental
3300028489	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1000m	Environmental
3300031588	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_SCM	Environmental
3300031598	Marine microbial communities from water near the shore, Antarctic Ocean - #284	Environmental
3300031623	Marine microbial communities from Western Arctic Ocean, Canada - CB21_32.1	Environmental
3300031625	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_surface	Environmental
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental
3300031802	Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057	Environmental
3300031804	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5	Environmental
3300031861	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416	Environmental
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental
3300032088	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515	Environmental
3300032130	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915	Environmental
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental
3300034695	Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500m	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPfeb09P26500mDRAFT_10245173	3300000140	Marine	TSIGSCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL*
LPjun09P16500mDRAFT_10069835	3300000179	Marine	VSCGTSTKGCFGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERKYL*
LPjun08P4500mDRAFT_10326982	3300000181	Marine	GCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL*
LPaug08P20500mDRAFT_10028632	3300000183	Marine	MVVGCGTSTIGCFGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL*
LP_A_09_P04_500DRAFT_10256372	3300000264	Marine	CGTSTKGCFGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERKYL*
JGI24817J26689_10055381	3300002221	Marine	TIRQKTTCFGHWVKGPGPQRGTRELNRDGSLPYYQCVDENNKGSNLEKIKQYN*
Ga0066855_101767351	3300005402	Marine	VVGCGTSTGGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLEERRYL*
Ga0066382_103239053	3300006013	Marine	VVGCGTSTGGCYGHWVKGPGHHRGTRALLKDAHLPYYQCVDENNKGNNLKERRYL*
Ga0068490_13494182	3300006303	Marine	MVVGCGTSTIGCFGHWVKGPGHHRGTRTLLKDAKLPYYQCVDENNKGNNLEERRYL*
Ga0068504_11195386	3300006304	Marine	KTSALDCFGHWVKGPGHHRGTRALLKDAKLPYYQCVDENNKGNNLEERRYL*
Ga0068504_11964202	3300006304	Marine	RGCYGHWVKGPGHHRGTRALLKDAHLPYYQCVDENNKGNNLKERRYL*
Ga0068469_11173834	3300006306	Marine	GCFGHWVKGPGQHRGTRALLKDAKLPYYQCVDENNKGTNLKERSYL*
Ga0068469_12065771	3300006306	Marine	GCYGHWVKGPGHHRGTRTLLKDASLPYYQCVDENNKGNNLEERRYL*
Ga0068470_14030091	3300006308	Marine	ISTGGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL*
Ga0068470_14839971	3300006308	Marine	CGISTGGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL*
Ga0068470_15355643	3300006308	Marine	TSTIGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLEERRYL*
Ga0068479_12073322	3300006309	Marine	GGCYGHWVKGPGHHRGTRTLLRDAHLPYYQCVDENNKGNNLKERRYL*
Ga0068478_12020574	3300006311	Marine	MVVGCETSTRGCYGHWVKGPGPQRGTRELNRDAKVPYYQCVDETNKGNNLEKRRY
Ga0068472_105486594	3300006313	Marine	MVVGCGTSTGGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLEERRYL*
Ga0068472_105697344	3300006313	Marine	MVVGCGTSTIGCFGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLNERRYL*
Ga0068497_11727734	3300006323	Marine	SIGGCYGHWVKGPGHHRGTRTLLKDASLPYYQCVDENNKGNNLKERRYL*
Ga0068476_13781071	3300006324	Marine	SCGTGTIGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERKYL*
Ga0068501_10975333	3300006325	Marine	MVVSCETSTGSCFGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL*
Ga0068501_11092174	3300006325	Marine	STIGCFGHWVKGPGHHRGTRTLLKDASLPYYQCVDENNKGNNLEERRYL*
Ga0068483_13152363	3300006330	Marine	VGCGTSTGGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDEKNKGNNLEERRYL*
Ga0068483_13253311	3300006330	Marine	GCGTSTGGCYGHWVKGPGHHRGTRALLKDAHLPYYQCVDENNKGNNLKERRYL*
Ga0068488_12661342	3300006331	Marine	MDGCCCGTSTIGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLEERRYL*
Ga0068488_13554701	3300006331	Marine	GCYGHWVKGPGHHRGTRALLKDAHLPYYQCVDENNKGNNLEERRYL*
Ga0068488_16036031	3300006331	Marine	IFIIITTWMVVGCGTSTIGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENTNGNNLKERRYL*
Ga0068488_16596891	3300006331	Marine	VGCGTSTGGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLEERRYL*
Ga0068502_14835254	3300006336	Marine	TSTGGCFGHWVKGPGHHRGTRTLLKDAKLPYYQCVDENNKGNNLEERRYL*
Ga0068502_18973242	3300006336	Marine	MVVGCGTSTIGCYGHWVKGPGHHRGTRTLLKDASLPYYQCVDENNKGNNLEERRYL*
Ga0068482_12653285	3300006338	Marine	VGCGTSTGGCFGHWVKGPGHHRGTRTLLKDAKLPYYQCVDENNKGNNLEERRYL*
Ga0068482_14899452	3300006338	Marine	MVVGCGTSTIGCYGHWVKGPGHHRGTRALLKDAHLPYYQCVDENNKGNNLKERKYL*
Ga0068481_13546496	3300006339	Marine	MVVSCETSTGSCFGHWVKGPGHHRGTRALLKDAHLPYYQCVDENNKGSNLKERRYL*
Ga0068481_14602711	3300006339	Marine	VGCGTSTGSCFGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLEERRYL*
Ga0068503_104438341	3300006340	Marine	GTITGDCYGHWVKGPGHHRGTRALLKDAHLPYYQCVDENNKGNNLKERRYL*
Ga0068503_104924872	3300006340	Marine	MVVGCGTSTIGCFGHWVKGPGHHRGTRALLKDAKLPYYQCVDENNKGNNLEERRYL*
Ga0068503_111352801	3300006340	Marine	MVVGCGTSIGGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGSNLKERRYL*
Ga0068493_104193613	3300006341	Marine	TGGCFGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL*
Ga0068493_104391202	3300006341	Marine	MVVGCGTSTIGCFGHWVKGPGHHRGTRTLLKDAKLPYYQCVDENNKGTNLKERRYL*
Ga0068493_104426601	3300006341	Marine	MATWMVGCETSMMGCYGHWVKGPGHHRGTRTLLKDAKLPYYQCVDENNKGTNLKERR
Ga0068493_106067822	3300006341	Marine	GTSTRGCYGHWVKGPGHHRGTRALLKDAHLPYYQCVDENNKGNNLKERRYL*
Ga0068493_106109464	3300006341	Marine	ISTGGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLEERRYL*
Ga0068493_106499782	3300006341	Marine	STRGCYGHWVKGPGHHRGTRHMLKDASLPYYQCVDENPPHKNDKKRKYL*
Ga0099697_11501863	3300006347	Marine	MVVGCGTSTGGCYGHWVKGPGHHRGTRALLKDAHLPYYQCVDENNKGNNLEERRYL*
Ga0099697_12174071	3300006347	Marine	GGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL*
Ga0099697_13677501	3300006347	Marine	GGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLEERRYL*
Ga0099697_14073466	3300006347	Marine	STGGCYGHWVKGPGHHRGTRPLIKDAHLPYYQCVDENNKGTNLKERRYL*
Ga0099957_13316513	3300006414	Marine	CFGHWVKGPGPQRGTRELNRDAHLPYYQCVDENNKGSNLEKRVQYD*
Ga0099957_14641931	3300006414	Marine	CGTSTKGCFGHWVKGPGHHRGTRALLKDAHLPYYQCVDENNKGSNLKERRYL*
Ga0099957_15137562	3300006414	Marine	MWNSTRGCFGHWVKGPGHHRGTRALLKDAKLPYYQCVDENNKGTNLKERSYL*
Ga0099958_12461313	3300006567	Marine	MVVGCKTSALDCFGHWVKGPGHHRGTRALLKDAKLPYYQCVDENNKGTNLKERRYL*
Ga0099958_13012433	3300006567	Marine	IGGCYGHWVKGPGHHRGTRTLLKDASLPYYQCVDENNKGNNLKERRYL*
Ga0098033_11813823	3300006736	Marine	TLGCFGHCVKGPGPQRGTRALNKDASLPYYQCVDENNKGNNLEERRYL*
Ga0098039_11700432	3300006753	Marine	GCFGHWVKGPGPQRGTRALNKDAHLPYYQCVDENNKGSNTEKRFYLK*
Ga0098039_11752124	3300006753	Marine	GTSTLGCFGHWVKGPGPQRGTRALNKDAKIPYYQCVDENNKGNNLEKRRYL*
Ga0066372_104620692	3300006902	Marine	MVTWMVVSCGTSTRGCYGHWVKGPGHHRGTRALLKDAKLPYYQCVDENNKGSNLKERKYL
Ga0066367_12978232	3300007291	Marine	MVVGCGTSTGGCFGHWVKGPGHHRGTRALLKDAHLPYYQCVDENNKGNNLKERRYL*
Ga0114996_111987031	3300009173	Marine	GCYGHWVKGPPERGTRALNKDAHLPYYQCVDENNKGNNLEKRRN*
Ga0114994_109674331	3300009420	Marine	TSTGGCYGHWVKGPPERGTRALNKDAHLPYYQCVDENNKGNNLEKRRN*
Ga0114997_101407433	3300009425	Marine	MVVGCSTSTIGCYGHWVKGPPERGTRALNKDAHLPYYQCVDENNKGNNLEKRRN*
Ga0105214_1048822	3300009595	Marine Oceanic	MVVSCGTSTRGCYGHWVKGPGHHRGTRALLKDAHLPYYQCVDENNKGNNLKERRYL*
Ga0105228_1258221	3300009613	Marine Oceanic	VVGCGTSIGGCFGHWVKGPGHHRGTRALLKDASLPYYQCVDENNKGNNLEERRYL*
Ga0115002_105504661	3300009706	Marine	TSTLGCYGHWVKGPGPQRGTRDLNKDSHLPYYQCVDENNKGNNLEKRSQF*
Ga0115002_110169721	3300009706	Marine	VGCGTSTRGCYGHWVKGPPERGTRALNKDAHLPYYQCVDENNKGNNLEKRRMP*
Ga0105235_1078103	3300009791	Marine Oceanic	MVVGCGTSTIGCYGHWVKGPGHHRGTRALLKDAHLPYYQCVDENNKGTNLKERRYL*
Ga0133547_1008121111	3300010883	Marine	MVVGCSTSTMGCYGHWVKGPGQQRGTRALLKDAHLPYYQCVDENNKGNNLKERRYL*
Ga0211679_10293973	3300020263	Marine	STIGCYGHWVKGPGHHRGTRALLKDAHLPYYQCVDENNKGNNLKERRYL
Ga0211679_10430973	3300020263	Marine	GCGTSTIGCYGHWVKGPGHHRGTRTLLKDASLPYYQCVDENNKGNNLEERRYL
Ga0206695_17626813	3300021348	Seawater	GCGISTGGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL
Ga0206680_101028694	3300021352	Seawater	GTSTGGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL
Ga0206685_100921864	3300021442	Seawater	TIGCFGHWVKGPGHHRGTRTLLKDASLPYYQCVDENNKGNNLKERRYL
Ga0206681_103262653	3300021443	Seawater	GCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLEERRYL
Ga0226832_101820893	3300021791	Hydrothermal Vent Fluids	TWMVGCGTSTIGCFGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGTNLKERRYL
Ga0207887_10400731	3300025069	Marine	ETSTGGCFGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL
Ga0207893_10716321	3300025241	Deep Ocean	SCETSTRGCFGHWVKGPGHHRGTRTLLKDAKLPYYQCVDENNKGTNLKERRYL
Ga0208179_10135571	3300025267	Deep Ocean	TIGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLEERRYL
Ga0208895_10771251	3300026207	Marine	VVGCGTSIESCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDEDNKGNNLEERRYL
Ga0208947_10674111	3300027553	Marine	GTSTRGCYGHWVKGPGHHRGTRHMLKDASLPYYQCVDENNKGNNLKERRYL
Ga0209482_11725021	3300027668	Marine	VVSCGTSTIGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL
Ga0209019_100912112	3300027677	Marine	GTSIRSCYGHWVKGPGHHRGTRHMLKDASLPYYQCVDENPPHNDVQGKRRYL
Ga0209089_104031791	3300027838	Marine	CYGHWVKGPPERGTRALNKDAHLPYYQCVDENNKGNNLEKRRMP
Ga0257108_10803572	3300028190	Marine	MVVSCGTSTIGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL
Ga0257107_11583701	3300028192	Marine	WTVVGCGTSIGSCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL
Ga0257113_12118122	3300028488	Marine	CETSTGGCYGHWVKGPGPQRGTRDLNKDSHLPYYQCVDENNKGNNLEKRRNI
Ga0257112_101081224	3300028489	Marine	MATWTVVGCGTSIGSCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL
Ga0257112_102148523	3300028489	Marine	TGGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL
Ga0302137_12517301	3300031588	Marine	GTSTGGCYGHWVKGPPERGTRALNKDAHLPYYQCVDENNKGNNLEKRRN
Ga0308019_100945021	3300031598	Marine	TWMVVGCGTSTIGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGTNLKERRYL
Ga0302123_105089681	3300031623	Marine	GCYGHWVKGPPERGTRALNKDAHLPYYQCVDENNKGNNLEKRRN
Ga0302135_102457704	3300031625	Marine	CGTSTLGCYGHWVKGPPERGTRALNKDAHLPYYQCVDENNKGSNLEKRSQF
Ga0315328_108193773	3300031757	Seawater	IVVGCGTSTIGCFGHWVKGPGHHRGTRTLLKDASLPYYQCVDENNKGNNLEERRYL
Ga0315332_102199721	3300031773	Seawater	GTSTIGCFGHWVKGPGHHRGTRHMLKDASLPYYQCVDENNKGNNLKERRYL
Ga0310123_106871762	3300031802	Marine	TWMVVGCETSIRSCYGHWVKGPGHHRGTRALLKDAHLPYYQCVDENNKGNNLKERRYL
Ga0310124_103988563	3300031804	Marine	MVVGCGTSTIGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLEERRYL
Ga0315319_100366288	3300031861	Seawater	VGCRTSTLGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL
Ga0315318_101603201	3300031886	Seawater	WMVVGCGTSIGGCYGHWVKGPGHHRGTRTLLKDASLPYYQCVDENNKGNNLEERRYL
Ga0315318_107909592	3300031886	Seawater	MVVGCGTSTGSCFGHWVKGPGHHRGTRTLLKDASLPYYQCVDENNKGSNLKERRYL
Ga0315329_100037831	3300032048	Seawater	CGTSIGSCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL
Ga0315329_101697134	3300032048	Seawater	IGCFGHWVKGPGHHRGTRTLLKDAKLPYYQCVDENNKGTNLKERRYL
Ga0315329_105044773	3300032048	Seawater	QKTTCFGHWVKGPGPQRGTRDLNRDASLPYYQCVDENNKGNNLEKRRYL
Ga0315329_107000861	3300032048	Seawater	GTSTGGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLEERRYL
Ga0315321_102100833	3300032088	Seawater	MVVSCGTSTRGCYGHWVKGPGHHRGTRHMLKDASLPYYQCVDENNKGNNLKERRYL
Ga0315333_104537092	3300032130	Seawater	GCYGHWVKGPGHHRGTRHMLKDASLPYYQCVDENPPHNDVQGKRRYL
Ga0315333_106070471	3300032130	Seawater	GTSTGSCYGHWVKGPGHHRGTRHMLKDASLPYYQCVDENPPHNDVQGKRRYL
Ga0315334_104168571	3300032360	Seawater	GTSTIGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLEERRYL
Ga0315334_109133134	3300032360	Seawater	TGGCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLEERRYL
Ga0310342_1000523498	3300032820	Seawater	IWIVGCGTSTIGCYGHWVKGPGHHRGTRALLKDASLPYYQCVDENKPHNDVQGKRRYL
Ga0310342_1000774957	3300032820	Seawater	KVECYGHWVKGPGPQRGTRELNRDASLPYYQCVDENNKGSNLEKRRYL
Ga0310342_1020453483	3300032820	Seawater	GCGTSTLSCFGHWVKGPGHHRGTRTLLKDASLPYYQCVDENNKGNNLKERRYL
Ga0310342_1021099391	3300032820	Seawater	IVVGCGTSTIGCFGHWVKGPGPQRGTRDLNKDAKIPYYQCVDENNKGNNLEKRRN
Ga0372840_043942_1096_1266	3300034695	Seawater	MVVGCGTSTIGCFGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL