Metagenome / Metatranscriptome Family F082786

Basic Information
Family ID	F082786
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	46 residues
Representative Sequence	KERKNNTSGQPEQKQERNYSQGENQPVLASLPNDPPVVTVTTYRRFS
Number of Associated Samples	102
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.23 %
% of genes from short scaffolds (< 2000 bps)	82.30 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Most Common Taxonomy
Group	Bacteria (95.575 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.929 % of family members)
Environment Ontology (ENVO)	Unclassified (28.319 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.442 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00643	zf-B_box	67.26
PF05154	TM2	7.08
PF13349	DUF4097	5.31
PF00132	Hexapep	1.77
PF16363	GDP_Man_Dehyd	0.88
PF06224	HTH_42	0.88
PF12860	PAS_7	0.88
PF14312	FG-GAP_2	0.88
PF13345	Obsolete Pfam Family	0.88
PF02224	Cytidylate_kin	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2314	Uncharacterized membrane protein YozV, TM2 domain, contains pTyr	General function prediction only [R]	7.08
COG0283	Cytidylate kinase	Nucleotide transport and metabolism [F]	0.88
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.58 %
Unclassified	root	N/A	4.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.58 %
Unclassified	root	N/A	4.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.58 %
Unclassified	root	N/A	4.42 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.48 %
Unclassified	root	N/A	4.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	22.12 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	19.47 %
Unclassified	root	N/A	4.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	22.12 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.47 %
Unclassified	root	N/A	4.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.47 %
Unclassified	root	N/A	4.42 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.47 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	7.96 %
Unclassified	root	N/A	4.42 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.88 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.47 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.42 %
Unclassified	root	N/A	4.42 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.88 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10516845	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300002245\|JGIcombinedJ26739_100108409	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2606	Open in IMG/M
3300002568\|C688J35102_119252826	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300003505\|JGIcombinedJ51221_10060442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1459	Open in IMG/M
3300004633\|Ga0066395_10933107	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300004633\|Ga0066395_10966729	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005093\|Ga0062594_100327764	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300005181\|Ga0066678_10028495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3015	Open in IMG/M
3300005293\|Ga0065715_10554816	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300005437\|Ga0070710_10913068	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005536\|Ga0070697_101256275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300005538\|Ga0070731_10909334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	583	Open in IMG/M
3300005542\|Ga0070732_10315565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300005542\|Ga0070732_10558577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300005554\|Ga0066661_10304672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	981	Open in IMG/M
3300005557\|Ga0066704_10016208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4286	Open in IMG/M
3300005559\|Ga0066700_10424532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	936	Open in IMG/M
3300005575\|Ga0066702_10501278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300005921\|Ga0070766_10450998	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300005995\|Ga0066790_10138518	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300006354\|Ga0075021_10107748	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1659	Open in IMG/M
3300006796\|Ga0066665_10990615	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300006854\|Ga0075425_100395040	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1593	Open in IMG/M
3300006904\|Ga0075424_101227878	All Organisms → cellular organisms → Bacteria → Acidobacteria	798	Open in IMG/M
3300006954\|Ga0079219_10262217	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300007076\|Ga0075435_100006258	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8401	Open in IMG/M
3300007076\|Ga0075435_100072584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2812	Open in IMG/M
3300007076\|Ga0075435_100999555	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300009088\|Ga0099830_10123699	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1961	Open in IMG/M
3300009089\|Ga0099828_10113651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2358	Open in IMG/M
3300009093\|Ga0105240_10262108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1993	Open in IMG/M
3300009174\|Ga0105241_10068290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2754	Open in IMG/M
3300009551\|Ga0105238_11384733	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300009870\|Ga0131092_11451358	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300010048\|Ga0126373_12904538	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300010329\|Ga0134111_10550380	Not Available	512	Open in IMG/M
3300010336\|Ga0134071_10108739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1323	Open in IMG/M
3300010375\|Ga0105239_12472968	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300010401\|Ga0134121_12725473	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300011119\|Ga0105246_10025007	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	3889	Open in IMG/M
3300011120\|Ga0150983_10878738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300011269\|Ga0137392_11046319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300011271\|Ga0137393_10062670	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2941	Open in IMG/M
3300012206\|Ga0137380_10024906	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5509	Open in IMG/M
3300012207\|Ga0137381_10756455	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300012350\|Ga0137372_10685144	Not Available	744	Open in IMG/M
3300012362\|Ga0137361_11947096	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300012924\|Ga0137413_10317827	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300012929\|Ga0137404_10818305	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300012930\|Ga0137407_10222734	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1701	Open in IMG/M
3300012930\|Ga0137407_10712628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300012960\|Ga0164301_11851889	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300012987\|Ga0164307_11603049	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300013297\|Ga0157378_10811450	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300013307\|Ga0157372_12889328	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300015245\|Ga0137409_10693241	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300015264\|Ga0137403_10573147	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300015371\|Ga0132258_10117011	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6324	Open in IMG/M
3300017822\|Ga0187802_10254247	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300017927\|Ga0187824_10216300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300017934\|Ga0187803_10465548	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300018433\|Ga0066667_10391844	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300019275\|Ga0187798_1158683	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300020579\|Ga0210407_10885413	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300020580\|Ga0210403_11358441	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300020581\|Ga0210399_10105647	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2306	Open in IMG/M
3300020581\|Ga0210399_10946001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300021088\|Ga0210404_10016092	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3144	Open in IMG/M
3300021088\|Ga0210404_10228993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1005	Open in IMG/M
3300021168\|Ga0210406_10330289	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300021168\|Ga0210406_10709510	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300021171\|Ga0210405_10109562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2180	Open in IMG/M
3300021171\|Ga0210405_10826691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300021181\|Ga0210388_11494140	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300021344\|Ga0193719_10025284	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2548	Open in IMG/M
3300021478\|Ga0210402_11666648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300021559\|Ga0210409_10536462	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300022504\|Ga0242642_1097049	Not Available	512	Open in IMG/M
3300024288\|Ga0179589_10081747	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300025898\|Ga0207692_10348051	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300025898\|Ga0207692_10411966	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300025914\|Ga0207671_10479842	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300025929\|Ga0207664_10330110	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1347	Open in IMG/M
3300025941\|Ga0207711_11924964	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300025942\|Ga0207689_11719722	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300026214\|Ga0209838_1022582	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300026316\|Ga0209155_1012253	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3720	Open in IMG/M
3300026320\|Ga0209131_1231374	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300026331\|Ga0209267_1124043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1086	Open in IMG/M
3300026538\|Ga0209056_10599654	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300027576\|Ga0209003_1119652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300027842\|Ga0209580_10158718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1115	Open in IMG/M
3300027854\|Ga0209517_10223011	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300027862\|Ga0209701_10024924	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3889	Open in IMG/M
3300027869\|Ga0209579_10684329	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300027889\|Ga0209380_10456190	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300027903\|Ga0209488_10717709	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300027905\|Ga0209415_10667933	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300028828\|Ga0307312_10458249	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300031057\|Ga0170834_105269987	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10066522	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300031421\|Ga0308194_10198595	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300031740\|Ga0307468_100973766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300031753\|Ga0307477_10552986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300031947\|Ga0310909_11315782	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300031954\|Ga0306926_11147160	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300032076\|Ga0306924_12581532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300032205\|Ga0307472_102569260	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300032828\|Ga0335080_10160938	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2483	Open in IMG/M
3300032828\|Ga0335080_11706900	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300033433\|Ga0326726_10348943	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1396	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.07%
Host-Associated	Host-Associated	15.04%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.53%
Plants	Host-Associated → Plants	15.04%
Aquatic	Environmental → Aquatic	3.54%
Wastewater	Engineered → Wastewater	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.39%
Freshwater	Environmental → Aquatic → Freshwater	2.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.65%
Sediment	Environmental → Aquatic → Sediment	0.89%
Peat	Environmental → Terrestrial → Peat	0.89%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.18%
Loam	Environmental → Terrestrial → Soil → Loam	14.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Sand	Environmental → Terrestrial → Soil → Sand	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.42%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.54%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.77%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.77%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_105168451	3300001593	Forest Soil	KEKKDNNTSGQPEPRQERNYSQGENQPVLASIPNVPPVGTVTTYRRIS*
JGIcombinedJ26739_1001084093	3300002245	Forest Soil	KDNNTSGQPEPRQERNYSQGENQPVLASIPNVPPVGTVTTYRRIS*
C688J35102_1192528261	3300002568	Soil	GPEPENRERKNNTSGQPEQKQERNYSQGENQLVLASIDPPVVTVNTDRRFV*
JGIcombinedJ51221_100604421	3300003505	Forest Soil	EREKNRKNDTSGQPEPRQERNYSRDENQPVLASLPDRTPAVSVTTTRRFV*
Ga0066395_109331071	3300004633	Tropical Forest Soil	EKDNKNKNNTSGQPEQRQERNYSRDENQPVLAYTPDDPTVVTVTTNGRFV*
Ga0066395_109667292	3300004633	Tropical Forest Soil	PAPTQERHRKDNNTSQQPEQRQERNYSRGDNQPVLASAPDAPPVVIASATRRFV*
Ga0062594_1003277642	3300005093	Soil	QPEQKKDRKNDTSGQPDQKQERNYSQGENQPILASTPALPPVVTETTNRRFV*
Ga0066678_100284955	3300005181	Soil	KNHKNDTSGQPEQRQERNYSQEQNQPILASSTNDPTVVTVTTNRRFV*
Ga0065715_105548162	3300005293	Miscanthus Rhizosphere	EQKKDRKNDTSGQPDQKQERNYSQGENQPILASTPALPPVVTETTNRRFV*
Ga0070710_109130682	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	EKEKKDNNTSGQPEPRQERNYSQGENQPVLASIPNDPPVETVTTYRRIS*
Ga0070697_1012562751	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	EKDNKNHKNDTSGQPEQRQERNYSQEQNQPILASSINDPTVVTVTTNRRFA*
Ga0070731_109093341	3300005538	Surface Soil	SEKDNKNKNNTSGQPEQRQERNYSRDENQPVLAYTPDNPTVVTVTTNGRLV*
Ga0070732_103155651	3300005542	Surface Soil	EKRKEQNYSRGENQPVLAFAPQDPTVVTGTRYRRLV*
Ga0070732_105585772	3300005542	Surface Soil	QEKERERNHKNNTSGDPEPRQERNYSRDENQPVLASGPQNPLAVSVTTTRRDV*
Ga0066661_103046721	3300005554	Soil	EQRERDKEHKNNTSGQPEPRQERNYSRDENQPVLASAPENPPAVSVSTTRRYV*
Ga0066704_100162081	3300005557	Soil	HRKDNNNTSGQPEPRQERNYSQGENQPVLASTPDVPPIAAVTATRRFV*
Ga0066700_104245321	3300005559	Soil	SGQPEQRQERNYSREENQPVLASSVDDPTVLTVTTYRRFV*
Ga0066702_105012782	3300005575	Soil	PAPRREKEKNHKNDTSGQPEQRQERNYSREENQPVLASSEDDPTVVTVTTCRRFV*
Ga0070766_104509981	3300005921	Soil	KKDNNTSGQPEPRQERNYSQGENQPVLASIPNVPPVGTVTTYRRIS*
Ga0066790_101385181	3300005995	Soil	DNNTSGQPEPRQERNYSQGENQPVLAAAPNVPPVVIETTYRRLV*
Ga0075021_101077483	3300006354	Watersheds	DKNHKNNTSGDPEPRQERNYSRDENQPVLASAPEDPPAVSVTTNRRFV*
Ga0066665_109906151	3300006796	Soil	PQKDQHRKDNNNTSGQPEPRQERNYSQGENQPVLASTPDVPPIAAVTATRRFV*
Ga0075425_1003950401	3300006854	Populus Rhizosphere	KERKNNTSGQPEQKQERNYSQGENQPVLASRPNDPPVVMVTTYRRFS*
Ga0075424_1012278782	3300006904	Populus Rhizosphere	KNDTSEQPEQKQERNYSQGENQPVLASRPIDPPVVSVTTNRRFV*
Ga0079219_102622171	3300006954	Agricultural Soil	PEPAPPEKEREHKNNTSGDPEPRQERNYSRDENQPVLALAPDAPPAVSVTTIRRFV*
Ga0075435_1000062589	3300007076	Populus Rhizosphere	SEPQNKEHKNNTSGQPEQRQERNYSLGPDQPMLAGLPNDPPVVMLTTYRRIA*
Ga0075435_1000725841	3300007076	Populus Rhizosphere	TSGQPEPTQERNYSQGENQPVLASLPNDPPVVRMTTYRRLS*
Ga0075435_1009995552	3300007076	Populus Rhizosphere	ENNNTSGQPEQRQERNYSQGENTPVLAFTPDAPPVVTLTAIRRFV*
Ga0099830_101236991	3300009088	Vadose Zone Soil	KEKERKNNTSGQPEQKQERNYSQGENQPVLASAPDDPPVVTVTTYRRFS*
Ga0099828_101136514	3300009089	Vadose Zone Soil	NDTSGQPEQRQERNYSREENQPVLASSKDDPTVVTVTTYRRFV*
Ga0105240_102621081	3300009093	Corn Rhizosphere	KKDNNTSGQPEPRQERNYSQGENQPVLASLPNDPPVVTVNAYRRLS*
Ga0105241_100682901	3300009174	Corn Rhizosphere	KEKEKEKKDNNTSGQPEPRQERNYSQGENQPVLASIPNDPPVETVTTYRRIS*
Ga0105238_113847332	3300009551	Corn Rhizosphere	RKNNTSGQPEQRQERNYSRDEHQPVLASLPESTPEVTVTTIRRYV*
Ga0131092_114513581	3300009870	Activated Sludge	DPEPKQERNYSRDENQPVLALVPDAPPAVSVTTIRRFV*
Ga0126373_129045381	3300010048	Tropical Forest Soil	EQRQERNYSRGDNQPVLASAPDAPPVVIASATRRFV*
Ga0134111_105503801	3300010329	Grasslands Soil	KNNTSGQPEQKQERNYSQEGNQPVFASLPDESPVVSVTTYRRFV*
Ga0134071_101087391	3300010336	Grasslands Soil	RKNNTSGQPEQKQERNYSQWENHPVLAAVPDQPPVVSVTTTYRRNS*
Ga0105239_124729681	3300010375	Corn Rhizosphere	KQERNYSQGENAPILASTPELPPVVTVTTYRRDV*
Ga0134121_127254731	3300010401	Terrestrial Soil	SGQPEQKQERNYSQGENQPVLASLPNDPPVVTVTTYRRFS*
Ga0105246_100250075	3300011119	Miscanthus Rhizosphere	SGQPEPTQERNYSQGENQPVLASLPNDPPVVRMTTYRRLS*
Ga0150983_108787381	3300011120	Forest Soil	NHKNNTSGEPEPRQERNYSRDENQPVLACTPEQAPAVSVTTIRRLV*
Ga0137392_110463191	3300011269	Vadose Zone Soil	EPAPREKDNKNHKNDTSGQPEQRQERNYSQEQNQPILASSINDPTVVTVTTNRRFV*
Ga0137393_100626704	3300011271	Vadose Zone Soil	SGQPEQRQERNYSQEQNQPILASSTNDPTVVTVTTNRRFA*
Ga0137380_100249061	3300012206	Vadose Zone Soil	EKNHKNDTSGQPEQRQERNYSREENQPVLASSKDDPTVVTVTTYRRFV*
Ga0137381_107564551	3300012207	Vadose Zone Soil	GKEKEKEHKNNTSGQPEQKQERNYSQGETQPVLASTRDDPPVVTVTTYRRVS*
Ga0137372_106851441	3300012350	Vadose Zone Soil	TKDNTSGQPEQKQQRNYSQEGNQPVFASLPNDPPVVNGATYRRFV*
Ga0137361_119470961	3300012362	Vadose Zone Soil	PEPRQERNYSQEGNQPVVASLPNDPPVVSVTTYRRLS*
Ga0137390_100194071	3300012363	Vadose Zone Soil	KDKTKNNTSGQPEQKQERNYSQEGNQPVFASLPHDQPVVTGATYRRFV*
Ga0137413_103178271	3300012924	Vadose Zone Soil	PDQKQERNYSREENQPVLAGLPDQPPAVTVTTNRRFV*
Ga0137404_108183052	3300012929	Vadose Zone Soil	DQKQERNYSQGENQPVLASTPELPPVVTVTTYRRFV*
Ga0137407_102227341	3300012930	Vadose Zone Soil	PEKQERNYSQGENQPVLASLPNDPPVGTVTTYRRLS*
Ga0137407_107126281	3300012930	Vadose Zone Soil	KDNTSGQPEPRQERNYSRDENQPVLASAPEDPPAVSVTTIRRFV*
Ga0164301_118518892	3300012960	Soil	DKERKNNTSGQPEQKQERNYSQGENQPVLASLPNDPPVVTVTTYRRFS*
Ga0164307_116030491	3300012987	Soil	PRQERNYSQGENQPVLASLPNVPPVGTATTYRRLS*
Ga0157378_108114502	3300013297	Miscanthus Rhizosphere	EQNKEKKDNNTSGQPEPRQERNYSQGENQPVLASLPNDPPVGTVTTYRRLS*
Ga0157372_128893282	3300013307	Corn Rhizosphere	KEQKQEKKDNNTSGQPEPRQERNYSQGENQPVLASLPNDPPVVTVTAYRRLS*
Ga0137409_106932411	3300015245	Vadose Zone Soil	QNKEQKNNNTSGEPEQKQERNYSQGENQPVLASLPNNPPVGTATTYRRLS*
Ga0137403_105731472	3300015264	Vadose Zone Soil	DNNTSERPEPREERNYSQGENQPVLARLPNDPPVVTTTYRRLS*
Ga0132258_101170116	3300015371	Arabidopsis Rhizosphere	SPKEQKKEQKNNNTSGEPDQNQERNYSQGENQPVLASLPNDPPVGTATTYRRLS*
Ga0187802_102542471	3300017822	Freshwater Sediment	DQKQERNYSQGENQVMLASLPENRPVVTVTTYRRFS
Ga0187824_102163002	3300017927	Freshwater Sediment	KATTPAESTPKEREKNRKNNTSGQPEPRQERNYSRDENQPVLASNPEDPPAVSVTTIRRF
Ga0187803_104655481	3300017934	Freshwater Sediment	NTSGQPEPRQERNYSQGENQVILASLPDQPPVVTVTTYRRFS
Ga0066667_103918442	3300018433	Grasslands Soil	TTPAEPAPRREKEKNHKNDTSGQPEQRQERNYSREENQPVLASSKDDPTVVTVTTYRRFV
Ga0066662_102223041	3300018468	Grasslands Soil	ENRKNNNTSGEPEQKKEQNYSRGENQPVLAFAPKDPTVVTVTANRRLV
Ga0187798_11586832	3300019275	Peatland	PEQKQERNYSQGDNQLILASLPDNPPVVTLATLRRNV
Ga0210407_108854132	3300020579	Soil	KEKKDNNTSGQPEPRQERNYSQGENQPVLASIPNDPPVETVTTYRRIS
Ga0210403_113584412	3300020580	Soil	EQNNNKEKKDNNTSGQPEPRQERNYSQGENQPVLASIPNVPPVGTVTTYRRIS
Ga0210399_101056471	3300020581	Soil	TPAEAVPNDKEREKNRKNNTSGEPEPRQERNYSRDENQPVLASLPDQPPAVSVTTIRRLA
Ga0210399_109460012	3300020581	Soil	DPEPRQERNYSRDENQPVLASGPQNPLAVSVITTRRDV
Ga0210404_100160924	3300021088	Soil	EPRQERNYSRDENQPVLASNPEDPPAVSVTTIRRLV
Ga0210404_102289931	3300021088	Soil	AEPGPKDLKERDKNHKNNTSGDPEPRQERNYSRDENQPVLASAPEDPPAVSVTTNRRFV
Ga0210406_103302893	3300021168	Soil	EPRQERNYSQGENQPVLASIPNVPPVGTVTTYRRIS
Ga0210406_107095102	3300021168	Soil	QRQERNYSQGESQPVLAAAPDIPPVVTMTTYRRFV
Ga0210405_101095621	3300021171	Soil	DPEPRQERNYSRDENQPVLASLPEPAPAVSVTTIRRIA
Ga0210405_108266912	3300021171	Soil	KELKERDKNHKNNTSGDPEPRQERNYSRDENQPVLASAPDNPPAVSVTTNRRFA
Ga0210388_114941401	3300021181	Soil	EKDKEHKNNSSGAPEPRQDRNYASDEIQPVLASAPDAPPAVSVTTIRRFV
Ga0193719_100252841	3300021344	Soil	EPEQKQERNYSQGENQPVLASLPNVPPVGTATTYRRLS
Ga0210402_116666482	3300021478	Soil	NTSGDPEPRQERNYSRDENQPVLASAPDNPPAVSVTTNRRFA
Ga0210409_105364621	3300021559	Soil	PRQERNYSQGENQPVLASIPNVPPVGTVTTYRRIS
Ga0242642_10970491	3300022504	Soil	RKNNNTSEQPEKRQERNYSQGESQLVVASLLNDPPVVTVTTYRRLV
Ga0179589_100817473	3300024288	Vadose Zone Soil	EQKQERNYSQGENQPVLASLPNDPPVGTATTYRRVS
Ga0207692_103480511	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	GPSEKDNKNKNNTSGQPEQRQERNYSRDENQPVLAYTPDDPTVVTVTTSRRLV
Ga0207692_104119661	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	EKEKKDNNTSGQPEPRQERNYSQGENQPVLASIPNDPPVETATTYRRIS
Ga0207671_104798421	3300025914	Corn Rhizosphere	QKQEKKDNNTSGQPEPRQERNYSQGENQPVLASLPNDPPVVTVNAYRRLS
Ga0207664_103301101	3300025929	Agricultural Soil	KQEKERERNHKNNTSGDPEPRQERNYSRDENQPVLASGPQNPLAVSVITTRRDV
Ga0207711_119249642	3300025941	Switchgrass Rhizosphere	KKDNNTSGQPEPRQERNYSQGENQPVLASLPNDPPVVTVNAYRRLS
Ga0207689_117197221	3300025942	Miscanthus Rhizosphere	EPRQERNYSQGENQPVLASIPNDPPVETVTTYRRIS
Ga0209838_10225822	3300026214	Soil	DNSKQEPEQKQERNYSQGENQPVLAWAPNNQPVVTLNADRRLS
Ga0209155_10122531	3300026316	Soil	KKEKERKNNTSGQPEQKQERNYSQWENHPVLAAVPDQPPVVSVTTTYRRNS
Ga0209131_12313742	3300026320	Grasslands Soil	DQKRERNYSREENQPVLAGLPDLPPAVTVTTNRRFV
Ga0209267_11240433	3300026331	Soil	QKKEQNYSRGENQPVLAFAPKDPTVVTVTTNRRLV
Ga0209056_105996542	3300026538	Soil	PQKDQHRKDNNNTSGQPEPRQERNYSQGENQPVLASTPDVPPIAAVTATRRFV
Ga0209003_11196522	3300027576	Forest Soil	PADSVPKEREKNRKNDTSGQPEPRQERNYSRDENQPVLASLPDRTPAVSVTTTRRFV
Ga0209580_101587182	3300027842	Surface Soil	ERNHKNNTSGDPEPRQERNYSRDENQPVLASGPQNPLAVSVITTRRDV
Ga0209517_102230112	3300027854	Peatlands Soil	EKPKERRNDTSGQPEQKQERNYSQGEGHVVLAAAPENPPVATRTMYRRFL
Ga0209701_100249241	3300027862	Vadose Zone Soil	ERKNNTSGQPEQKQERNYSQGETQPVLASAPDDPPVVTVTTYRRFS
Ga0209579_106843292	3300027869	Surface Soil	SEKDNKNKNNTSGQPEQRQERNYSRDENQPVLAYTPDNPTVVTVTTNGRLV
Ga0209380_104561901	3300027889	Soil	EKKDKKDNNTSGQPEPRQERNYSQGENQPVLASIPNVPPVGTVTTYRRIS
Ga0209488_107177092	3300027903	Vadose Zone Soil	TSGQPEPRQERNYSQGENQPVLASIPNDPPVETVTTYRRIS
Ga0209415_106679331	3300027905	Peatlands Soil	SPEARPKEKPKDRKNDTSGQPEPRQERNYSLGESQPVLAAAPHDPPVVIVNTYRRFS
Ga0307312_104582492	3300028828	Soil	KERKNNTSGQPEQKQERNYSQGENQPVLASLPNDPPVVTVTTYRRFS
Ga0170834_1052699871	3300031057	Forest Soil	PKEQNKEKKDNNTSGQPEPGQERNYSQGENQPVLASIPNDPPVVTMTAYRRLS
(restricted) Ga0255310_100665221	3300031197	Sandy Soil	VPSPKEQKQEKKDNNTSGQPEPRQERNYSQGENQPVLASIPNDPPVVTMTAYRRLS
Ga0308194_101985951	3300031421	Soil	KNNTSGQPEQKQERNYSQGENQPVLASLTNYPPVVTVTTYRRFS
Ga0307468_1009737662	3300031740	Hardwood Forest Soil	ESTPKEREKNRKNDTSGQPEPRQERNYSRDENQPVLASLPEPAPAVSVTTTRRFV
Ga0307477_105529861	3300031753	Hardwood Forest Soil	SGDPEPRQERNYSRDENQPVLASGPQDPLAVSVSTTRRDV
Ga0310909_113157821	3300031947	Soil	PQNKERKNNNNTSEQPEKRQERNYSQGESQFVLAALREENPVVMVTTYRRLV
Ga0306926_111471601	3300031954	Soil	KERKNNNNTSEQPEKRQERNYSQGESQFVLAALREENPVVMVTTYRRLV
Ga0306924_125815322	3300032076	Soil	PEPRQEQNYSREENQPVLALAPDNPPAVSVTTIRRLV
Ga0307472_1025692602	3300032205	Hardwood Forest Soil	KEPINNKEKKDDNTSGQPEPRQERNYSQGEKQPVLASIPNDPPVGTVTTYRRLS
Ga0335080_101609381	3300032828	Soil	PDEKQERNYSREENQPVLAGLPEVPPAVTVTTNRRFV
Ga0335080_117069001	3300032828	Soil	SGQPEPTQERNYSQGENQPVLAYLPNDPPVVRMTTYRRLL
Ga0326726_103489431	3300033433	Peat Soil	KDNNTSGQPEPRQERNYSQGENQPVLASLPSDPPVVRMTTYRRLV

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters