Metagenome / Metatranscriptome Family F082784

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082784
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	48 residues
Representative Sequence	GMRCAVGVTALATIVIGVYPEPFIRGVNWSLGIAQSPHVAAMLK
Number of Associated Samples	98
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	96.46 %
% of genes from short scaffolds (< 2000 bps)	86.73 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.717 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (17.699 % of family members)
Environment Ontology (ENVO)	Unclassified (46.903 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (39.823 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 47.22% β-sheet: 0.00% Coil/Unstructured: 52.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF09527	ATPase_gene1	51.33
PF03899	ATP-synt_I	10.62
PF00119	ATP-synt_A	8.85
PF00137	ATP-synt_C	3.54
PF00361	Proton_antipo_M	2.65
PF13460	NAD_binding_10	1.77
PF11066	DUF2867	0.88
PF01833	TIG	0.88
PF08240	ADH_N	0.88
PF00135	COesterase	0.88
PF03372	Exo_endo_phos	0.88
PF07238	PilZ	0.88
PF04055	Radical_SAM	0.88
PF01740	STAS	0.88
PF07607	DUF1570	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3312	FoF1-type ATP synthase accessory protein AtpI	Energy production and conversion [C]	10.62
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	8.85
COG0636	FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K	Energy production and conversion [C]	3.54
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.72 %
Unclassified	root	N/A	36.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.72 %
Unclassified	root	N/A	36.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.72 %
Unclassified	root	N/A	36.28 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	55.75 %
Unclassified	root	N/A	36.28 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.28 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	31.86 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	22.12 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.28 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.86 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	22.12 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.28 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22.12 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.28 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.86 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5.31 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.88 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.88 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.28 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.86 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.65 %
Zavarzinella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella	0.88 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.88 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.28 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.86 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.65 %
Zavarzinella formosa	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	0.88 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.88 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001170\|JGI12704J13340_1007302	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300004080\|Ga0062385_10075591	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1554	Open in IMG/M
3300004092\|Ga0062389_100229334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1859	Open in IMG/M
3300004476\|Ga0068966_1426290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	529	Open in IMG/M
3300006059\|Ga0075017_100361555	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300006086\|Ga0075019_10676765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300006102\|Ga0075015_100851980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300006162\|Ga0075030_100194877	Not Available	1632	Open in IMG/M
3300006354\|Ga0075021_10302717	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300006642\|Ga0075521_10023935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2512	Open in IMG/M
3300009029\|Ga0066793_10200063	All Organisms → cellular organisms → Bacteria → Acidobacteria	1163	Open in IMG/M
3300009092\|Ga0105250_10292521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300009143\|Ga0099792_10499967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300009143\|Ga0099792_10912229	Not Available	582	Open in IMG/M
3300009547\|Ga0116136_1012402	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3051	Open in IMG/M
3300009631\|Ga0116115_1141394	Not Available	612	Open in IMG/M
3300009632\|Ga0116102_1189828	Not Available	554	Open in IMG/M
3300009635\|Ga0116117_1001834	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5641	Open in IMG/M
3300009635\|Ga0116117_1089568	Not Available	767	Open in IMG/M
3300009636\|Ga0116112_1107757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300009641\|Ga0116120_1207142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300009641\|Ga0116120_1281492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300009665\|Ga0116135_1183634	Not Available	793	Open in IMG/M
3300009839\|Ga0116223_10173827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1328	Open in IMG/M
3300009839\|Ga0116223_10228220	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	1129	Open in IMG/M
3300009839\|Ga0116223_10544477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300010339\|Ga0074046_10285191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300010341\|Ga0074045_10045079	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3224	Open in IMG/M
3300012096\|Ga0137389_10241337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1516	Open in IMG/M
3300012359\|Ga0137385_10505040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300012361\|Ga0137360_11778756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300012917\|Ga0137395_10455598	Not Available	919	Open in IMG/M
3300012918\|Ga0137396_10708687	Not Available	742	Open in IMG/M
3300012930\|Ga0137407_10274250	Not Available	1535	Open in IMG/M
3300012944\|Ga0137410_10318431	Not Available	1236	Open in IMG/M
3300014156\|Ga0181518_10064902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2127	Open in IMG/M
3300014156\|Ga0181518_10541880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300014158\|Ga0181521_10144297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1378	Open in IMG/M
3300014158\|Ga0181521_10331252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300014638\|Ga0181536_10377712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300014657\|Ga0181522_10446096	Not Available	777	Open in IMG/M
3300015167\|Ga0167661_1032314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	981	Open in IMG/M
3300015241\|Ga0137418_10717059	Not Available	764	Open in IMG/M
3300016702\|Ga0181511_1163206	Not Available	703	Open in IMG/M
3300016750\|Ga0181505_10857691	Not Available	703	Open in IMG/M
3300017925\|Ga0187856_1049893	Not Available	1841	Open in IMG/M
3300017931\|Ga0187877_1319453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300017932\|Ga0187814_10133954	Not Available	921	Open in IMG/M
3300017938\|Ga0187854_10117913	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1230	Open in IMG/M
3300017940\|Ga0187853_10068515	Not Available	1789	Open in IMG/M
3300017940\|Ga0187853_10464794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300017943\|Ga0187819_10287959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300017973\|Ga0187780_10807555	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300017975\|Ga0187782_11059200	Not Available	632	Open in IMG/M
3300018001\|Ga0187815_10028811	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2356	Open in IMG/M
3300018002\|Ga0187868_1156056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300018009\|Ga0187884_10084856	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1403	Open in IMG/M
3300018009\|Ga0187884_10348080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300018016\|Ga0187880_1035392	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2788	Open in IMG/M
3300018017\|Ga0187872_10208202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300018019\|Ga0187874_10388341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300018024\|Ga0187881_10255057	Not Available	734	Open in IMG/M
3300018035\|Ga0187875_10241426	Not Available	988	Open in IMG/M
3300018040\|Ga0187862_10037824	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3590	Open in IMG/M
3300018040\|Ga0187862_10782447	Not Available	554	Open in IMG/M
3300018043\|Ga0187887_10783073	Not Available	564	Open in IMG/M
3300018046\|Ga0187851_10154444	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1388	Open in IMG/M
3300018085\|Ga0187772_10590861	Not Available	789	Open in IMG/M
3300018086\|Ga0187769_10008005	All Organisms → cellular organisms → Bacteria	6626	Open in IMG/M
3300018086\|Ga0187769_10459957	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300018090\|Ga0187770_10729264	Not Available	791	Open in IMG/M
3300019082\|Ga0187852_1283801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300019787\|Ga0182031_1188243	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300019787\|Ga0182031_1439235	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300019888\|Ga0193751_1204939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300020062\|Ga0193724_1101304	Not Available	583	Open in IMG/M
3300021433\|Ga0210391_10231903	Not Available	1450	Open in IMG/M
3300021433\|Ga0210391_10861089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300022726\|Ga0242654_10196448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300022873\|Ga0224550_1024053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300022881\|Ga0224545_1005046	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2176	Open in IMG/M
3300025414\|Ga0208935_1018196	Not Available	938	Open in IMG/M
3300025581\|Ga0208355_1052938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300025878\|Ga0209584_10007344	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3606	Open in IMG/M
3300026557\|Ga0179587_11158600	Not Available	509	Open in IMG/M
3300027334\|Ga0209529_1018669	Not Available	1172	Open in IMG/M
3300027633\|Ga0208988_1058334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	979	Open in IMG/M
3300027862\|Ga0209701_10007908	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	6948	Open in IMG/M
3300027862\|Ga0209701_10125133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1589	Open in IMG/M
3300027894\|Ga0209068_10598059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300027894\|Ga0209068_10675668	Not Available	604	Open in IMG/M
3300027911\|Ga0209698_10699702	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300028566\|Ga0302147_10096440	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1015	Open in IMG/M
3300028759\|Ga0302224_10395400	Not Available	561	Open in IMG/M
3300029882\|Ga0311368_10766877	Not Available	660	Open in IMG/M
3300029945\|Ga0311330_11032192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300029951\|Ga0311371_10481789	Not Available	1646	Open in IMG/M
3300029954\|Ga0311331_10151492	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2777	Open in IMG/M
3300029990\|Ga0311336_11919697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300030042\|Ga0302300_1109358	Not Available	823	Open in IMG/M
3300030057\|Ga0302176_10347755	Not Available	597	Open in IMG/M
3300030659\|Ga0316363_10280878	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	670	Open in IMG/M
3300030838\|Ga0311335_10621680	Not Available	757	Open in IMG/M
3300030991\|Ga0073994_10051566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300031028\|Ga0302180_10569732	Not Available	548	Open in IMG/M
3300031525\|Ga0302326_10793584	Not Available	1366	Open in IMG/M
3300031708\|Ga0310686_109409129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1025	Open in IMG/M
3300031754\|Ga0307475_10581255	Not Available	897	Open in IMG/M
3300031962\|Ga0307479_10796035	Not Available	921	Open in IMG/M
3300032160\|Ga0311301_10356926	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2280	Open in IMG/M
3300032892\|Ga0335081_10107350	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4127	Open in IMG/M
3300032955\|Ga0335076_10195552	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1926	Open in IMG/M
3300033887\|Ga0334790_187415	Not Available	601	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.11%
Host-Associated	Host-Associated	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.75%
Aquatic	Environmental → Aquatic	43.36%
Plants	Host-Associated → Plants	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.48%
Freshwater	Environmental → Aquatic → Freshwater	36.28%
Peat	Environmental → Terrestrial → Peat	13.27%
Sediment	Environmental → Aquatic → Sediment	7.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	36.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.32%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.08%
Loam	Environmental → Terrestrial → Soil → Loam	2.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	24.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.27%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	8.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	17.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	8.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.08%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.31%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.31%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.54%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.65%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.65%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.65%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.77%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.77%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.77%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.77%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001170	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015167	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11b, vegetated hydrological feature)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030042	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_1	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12704J13340_10073023	3300001170	Forest Soil	GVTALATIVIGVYPQPLIKGVNWSLGIAQPPHAAALGK*
Ga0062385_100755911	3300004080	Bog Forest Soil	SIGMRCAVGVAALATIVIGVYPEPFIRGVNWSLNIAQAAPHVAAMIK*
Ga0062389_1002293341	3300004092	Bog Forest Soil	ISFGMRCAVGVTALATLVIGIYPEPFIRSVNWSLNIAQTPRVAALNK*
Ga0068966_14262902	3300004476	Peatlands Soil	MRCAVGVTALATIVIGVYPEPFIRGVNWSLGIAQSPHVAAMLK*
Ga0075017_1003615552	3300006059	Watersheds	LMRAPMETARLPISFGMRCTLGVTALATIVIGVFPEPFIRGVNWSLGIVQSPHVAAMVR*
Ga0075019_106767652	3300006086	Watersheds	RAPLETGRLPLSIGMRCTLGVTALATIVIGVFPEPFISTVNWSLGIVQSPHVAALVR*
Ga0075015_1008519803	3300006102	Watersheds	LSVGMRCALGVTALATIVIGIFPEPFIQTVNWSLGIVQAPHVAALMR*
Ga0075030_1001948773	3300006162	Watersheds	LKIANSMLMRAPMETARLPISFGMRCTLGVTALATIVIGVFPEPFIRGVNWSLGIVQSPHVAAMVR*
Ga0075021_103027171	3300006354	Watersheds	SMETERLPISLGMRVALGITALATIVIGVYPEPFIRSVNWSLGIAQTPHVAAMLK*
Ga0075521_100239351	3300006642	Arctic Peat Soil	GMRCAVGVTALATIVIGVYPEPFIRGVNWSLGIVQSPHVAAMLK*
Ga0066793_102000632	3300009029	Prmafrost Soil	VTALATIVIGVYPEPFIRGVNWSLGIVQSPHVAALMK*
Ga0105250_102925212	3300009092	Switchgrass Rhizosphere	AIATLVIGVYPEPFIQAVNWSLGIVRNPAVANLVR*
Ga0099792_104999673	3300009143	Vadose Zone Soil	PVSLGMRCAVGVTALATIVIGVYPEPFIRGVNWSLGIVQSPHVAAMVK*
Ga0099792_109122291	3300009143	Vadose Zone Soil	RLSVSLGMRCAVGVTALATLVIGVYPEPFIRSVNWSLGIVQSPHVAAVLK*
Ga0116136_10124026	3300009547	Peatland	MRAPMETGRLPISLGMRCAVGVTALATIVIGVYPEPFIRSVNWSLGIAQSPHVAAMIR*
Ga0116115_11413943	3300009631	Peatland	GMRCAVGVTALATIVIGVYPEPFIRSVNWSLGIAQSPHVAAMIR*
Ga0116102_11898282	3300009632	Peatland	VSLGMRCAVGVTALATIVIGVYPEPFIRSVNWSLGIPQPPHVAARVK*
Ga0116117_10018341	3300009635	Peatland	MRFAVGIAALATIVIGVFPEPFIHGVNWSLNIAQNPHVAALVK*
Ga0116117_10895682	3300009635	Peatland	EPGKMPVSIGMRFALGLTGLMTILIGVFPEPFIRTVNWSLLIASPHVSSMAR*
Ga0116112_11077573	3300009636	Peatland	PVSLGMRCAVGVTALATIVIGVYPEPFIRGVNWSLGIAQSPHVAAMLK*
Ga0116120_12071423	3300009641	Peatland	GMRCAVGVTALATIVIGVYPEPFIRGVNWSLGIAQSPHVAAMLK*
Ga0116120_12814922	3300009641	Peatland	VTALATIVIGVYPEPFIRSVNWSLGIAQTPPVATRLK*
Ga0116135_11836343	3300009665	Peatland	GRLPISLGMRCAVGVAALATIVIGIYPEPFIRSVNWSLGIAQTPHVAAMLK*
Ga0116223_101738271	3300009839	Peatlands Soil	LKIANSMLMRAPVETERLPVSIGMRFTVGVTALATIVIGVFPEPFIRGVNWSLNIAQSPHVAAMLR*
Ga0116223_102282202	3300009839	Peatlands Soil	MRAPMETGRLPISLGMRCAVGVAALATIVIGVYPEPFIRSVNWSLGIAQSPHVAAMLR*
Ga0116223_105444773	3300009839	Peatlands Soil	MRCAVGVTALATIVIGVYPEPFIRGVNWSLGIAQSPHVAAMVK*
Ga0074046_102851914	3300010339	Bog Forest Soil	ALMTIFIGVYPEPFIRSVNWSLGIVQSPHVAALIK*
Ga0074045_100450791	3300010341	Bog Forest Soil	ALATIVIGIYPEPFIRGVNWSLGIAQSPHVAAMLR*
Ga0137389_102413372	3300012096	Vadose Zone Soil	TALATIVIGVYPEPFIRSVNWSLGIVQSPHVAAMVK*
Ga0137385_105050401	3300012359	Vadose Zone Soil	GVTALATIVIGVYPEPFIRGVNWSLGIVQSPHVAAAVR*
Ga0137360_117787563	3300012361	Vadose Zone Soil	GVTALATLVIGVYPEPFIQSVNWSLGIVQSPHIAATRR*
Ga0137395_104555981	3300012917	Vadose Zone Soil	GMRCAVGVTALATIVIGVYPEPFIRGVNWSLGIVQSPHVAALVK*
Ga0137396_107086873	3300012918	Vadose Zone Soil	GMRCAVGVTALATIVIGVYPEPFIRGVNWSLGIVQSPHVAAMVK*
Ga0137407_102742504	3300012930	Vadose Zone Soil	ISVGMRVALGVTALATIVIGVYPEPFIRSVNWSLGIAQSPHVAAVMK*
Ga0137410_103184312	3300012944	Vadose Zone Soil	MRAALGITALATIVIGVYPEPFIQGVNWSLGIAQASHVAAMMK*
Ga0181518_100649025	3300014156	Bog	KIANAMLMRAPMETERLPISFGMRCTVGVTALATIVIGVFPEPFIRGVNWSLGIAQTPHVAAMLK*
Ga0181518_105418801	3300014156	Bog	AVGVAALATIVIGVYPEPFIRGVNWSLGIAQSPHVAAMIK*
Ga0181521_101442974	3300014158	Bog	ALATIVIGVYPEPFIRGVNWSLGIAQSPHVAAMLK*
Ga0181521_103312523	3300014158	Bog	LPISLGMRCTVGVTALATIVIGVYPEPFIRGVNWSLNIAQSPHVAALIK*
Ga0181536_103777123	3300014638	Bog	PMETERLPISLGMRCTLGVTALATLVIGIYPEPFIRGVNWSLRIAQSPHVAAMLK*
Ga0181522_104460962	3300014657	Bog	GLMTILIGVFPEPFIRTVNWSLLIASPHVSSMAR*
Ga0167661_10323141	3300015167	Glacier Forefield Soil	RCAVGITALATIVIGIYPEPFIRGVNWSLGIAQSPNVAAMLK*
Ga0137418_107170593	3300015241	Vadose Zone Soil	TERLPVSLGMRCAVGVTALATIVIGVYPEPFIRGVNWSLGIVQSPHVAAMVK*
Ga0181511_11632063	3300016702	Peatland	MRCAVGVAALATIVIGVYPEPFIRGVNWSLGIVQTPHVAAMIK
Ga0181505_108576913	3300016750	Peatland	ALATIVIGVFPEPFIRGVNWSLGIAQTPHVAAMLK
Ga0187856_10498934	3300017925	Peatland	ALATIVIGVYPEPFIRGVNWSLNIAQSPHVAAVLK
Ga0187877_13194531	3300017931	Peatland	RLPVSLGMRCAVGVTALATIVIGVYPEPFIRGVNWSLNIAQSPHVAALIK
Ga0187814_101339542	3300017932	Freshwater Sediment	FAVGLTALATIVIGVFPEPFIRTVNWSLGIAQSPHVAAMVR
Ga0187854_101179134	3300017938	Peatland	VGVAALATIVIGVYPEPFIRGVNWSLGIAQSPHVAAMIK
Ga0187853_100685154	3300017940	Peatland	LMRAPMESGRLPVSLGMRCAVGVTALATIVIGVYPEPFIRGVNWSLNIAQSPHVAAVLK
Ga0187853_104647941	3300017940	Peatland	MLMRAPVEAGRLPISVGMRLAVGVAALATIVIGVFPEPFIRGVNWSLGIVQTPHVAALIK
Ga0187819_102879591	3300017943	Freshwater Sediment	LGMRVAVGVTGLATIVIGIFPEPFIRTVNWSLGIASPHVAAMVR
Ga0187780_108075552	3300017973	Tropical Peatland	MRVAVGLTALATIVIGVFPEPFIRTVNWSLGIAQTPHVAAMMR
Ga0187782_110592002	3300017975	Tropical Peatland	PMEPGRLPVSLAMRFALGVTALATLVIGVYPEPFIRTVNWSLGIPQTPHVTAMMR
Ga0187815_100288111	3300018001	Freshwater Sediment	YLKIANSMLMRAPMEIARLPVSLGMRCAVGVTALATIVIGVFPEPFIRGVNWSLNIAQVPHVAAMLK
Ga0187868_11560563	3300018002	Peatland	PVSLGMRCAVGVTALATIVIGVYPEPFIRGVNWSLNIAQSPHVAAVLK
Ga0187884_100848564	3300018009	Peatland	LGMRCAVGVTALATIVIGVYPEPFIRSVNWSLGIAQTPPVATRLK
Ga0187884_103480801	3300018009	Peatland	GVTALATIVIGVYPQPLIKGVNWSLGIAQPPHAAALGK
Ga0187880_10353926	3300018016	Peatland	MRAPMETGRLPISLGMRCAVGVTALATIVIGVYPEPFIRSVNWSLGIAQSPHVAAMIR
Ga0187872_102082023	3300018017	Peatland	GRLPVSLGMRCAVGVTALATIVIGVYPEPFIRGVNWSLNIAQSPHVAAVLK
Ga0187874_103883412	3300018019	Peatland	APMETGRLPLSLGMRCALGVTALATLVIGVYPEPFIRGVNWSLGIAQSPHVAAMIK
Ga0187881_102550571	3300018024	Peatland	LGMRCAVGVTALATIVIGVYPEPFIRGVNWSLKIAQSPHAAAVL
Ga0187875_102414261	3300018035	Peatland	PVETERLPVSIGMRLAVGVPALATIVIGVFPEPFIRGVNWSLNIAQSPHVAAMLR
Ga0187862_100378244	3300018040	Peatland	METERLPVSLGMRCAVGVTALATIVIGVYPEPFIRGVNWSLNIAQSPHVAALIK
Ga0187862_107824472	3300018040	Peatland	ALATLVIGVYPEPFIRGVNWSLGIVQSPHVAAMIR
Ga0187887_107830731	3300018043	Peatland	PVEAGRLPISLGMRCAVGVAALATIVIGIYPEPFIRSVNWSLGIAQTPHVAAMLK
Ga0187851_101544441	3300018046	Peatland	CAVGVAALATIVIGIYPEPFIRSVNWSLGIAQTPHVAAMLK
Ga0187772_105908612	3300018085	Tropical Peatland	AALATLVIGVFPEPFIRSVNWSLGLAQTPHVAAMLR
Ga0187769_100080056	3300018086	Tropical Peatland	MRAPTEAGKLPLSLGMRFAVGVTALATIVIGVFPEPFIETVNWSLGIVQSPHMTAMMR
Ga0187769_104599572	3300018086	Tropical Peatland	TALATIVIGIFPEPFIQTVNWSLGLTQSPHIAAMMR
Ga0187770_107292643	3300018090	Tropical Peatland	EAERLPVSLGMKAAVGVTALATIVIGVFPEPFIRSVNWSLGIAQAPHVTAMVR
Ga0187852_12838011	3300019082	Peatland	PMETERLPVSLGMRCAVGVAALATIVIGVYPEPFIRGVNWSLGIAQSPHVAAMIK
Ga0182031_11882432	3300019787	Bog	ISVGMRFAVGIAALATIVIGVFPEPFIHGVNWSLNIAQNPHVAALVK
Ga0182031_14392351	3300019787	Bog	LYYYLKIANSMLVRAPVETGKLPISVGMRFAVGIAALATIVIGVFPEPFIHGVNWSLNIAQNPHVAALVK
Ga0193751_12049393	3300019888	Soil	AVSLGMRCAVGVTALATIVIGVYPEPFIRGVNWSLGIVQSPHVAAMVK
Ga0193724_11013042	3300020062	Soil	IANAIFVRPSLVTTRLPLSWGMRAALGVTALATIVIGIYPEPFIQSVNWSLGIAQASHVASVMN
Ga0210391_102319034	3300021433	Soil	GCAVGVTALATMVIGIYPEPVIRGVNWSIGIAQAPRVATRAK
Ga0210391_108610893	3300021433	Soil	PAEAGRLPVSLGMRCAVGVAALATIVIGVYPEPFIRGVNWSLGIAQTPHVAAMVK
Ga0242654_101964483	3300022726	Soil	RAPMETERLPVSLAMRCAVGVTALGTMVIGVYPEPFIRGVNWSLGIVQSPHVAAMVK
Ga0224550_10240531	3300022873	Soil	VGVTALATIVIGVYPEPFIRGVNWSLGIAQAPHVAAVVK
Ga0224545_10050461	3300022881	Soil	ERLPVSFGMRCAVGITALATLFIGIYPEPAIRSVNWSLGIRQPAPVAVIRK
Ga0208935_10181963	3300025414	Peatland	RAPTERERLPVSFGMRCAVGVAALATLFIGIYPEPAIRSVNWSLGIRQPAPVAVIKK
Ga0208355_10529381	3300025581	Arctic Peat Soil	ETERLPLSLGMRCALGVTALATIVIGVYPEPFIRGVNWSLGIVQSPHVAALMK
Ga0209584_100073441	3300025878	Arctic Peat Soil	DPERLPISLGMRCAVGVTALATIVIGVYPEPFIRGVNWSLGIVQSPHVAAMLK
Ga0179587_111586001	3300026557	Vadose Zone Soil	AALDITALATIVIGMYPEPFIQGVNWSLGIAQASHG
Ga0209529_10186691	3300027334	Forest Soil	RAPMESGRLPVSLGMRCAVGITALATLFIGVYPEPAIRSVNWSLGIRQTRPVAAVKK
Ga0208988_10583343	3300027633	Forest Soil	PMETERLPVSLGMRCAVGVTALATIVIGVYPEPFIRGVNWSLGIVQSPHVAAIVK
Ga0209701_100079088	3300027862	Vadose Zone Soil	SISLGMRAALGVTALATIVIGVYPEPFIRSVNWSLGIAQASHVAAVMK
Ga0209701_101251332	3300027862	Vadose Zone Soil	AVGVTALATIVIGVYPEPFIRSVNWSLGIVQSPHVAAMVK
Ga0209068_105980591	3300027894	Watersheds	VGVCALATIVIGVYPEPFIRTANWALGIVNSPSMAAVMK
Ga0209068_106756682	3300027894	Watersheds	SMETERLPISLGMRVALGITALATIVIGVYPEPFIRSVNWSLGIAQTPHVAAMLK
Ga0209698_106997021	3300027911	Watersheds	YYYLKIANSMLMRAPMETGRLPVSIGMRFAVGIAALATIVIGVFPEPFIHGVNWSLGIVQTPHVAALVK
Ga0302147_100964401	3300028566	Bog	MRFAVGLAALATIVIGIYPEPFIRSVNWSLNIVQSQHVAALVK
Ga0302224_103954001	3300028759	Palsa	IERERLPISMGLRCAVGVTALATIVIGIYPEPFIRGVNWSIGITQAPRIATRAK
Ga0311368_107668771	3300029882	Palsa	ERLPISMGLRCAVGVTALATIVIGIYPEPFIRGVNWSIGITQAPRVAIRAK
Ga0311330_110321921	3300029945	Bog	PVSIGMRFAVGITALATIVIGIYPEPFIRSVNWSLNIVQSPHVAMMVK
Ga0311371_104817891	3300029951	Palsa	TALATIVIGVFPEPFIRGVNWSLGIAQSPHVAAMLR
Ga0311331_101514926	3300029954	Bog	EKLPVSIGMRFAVGITALATIVIGIYPEPFIRSVNWSLNIVQSPHVAMMVK
Ga0311336_119196971	3300029990	Fen	GRLPVSLGMRFALGVCALATIVIGVYPEPFIRSVNWALGIAQSPHVAAMMK
Ga0302300_11093581	3300030042	Palsa	GLRCAVGVTALATIVIGIYPEPFIRGVNWSIGITQAPRIATRAK
Ga0302176_103477551	3300030057	Palsa	ISMGLRCAVGVTALATIVIGIYPEPFIRGVNWSIGITQAPRIATRAK
Ga0316363_102808781	3300030659	Peatlands Soil	NIANTMLMRAPVETERLPVSIGMRFTVGVTALATIVIGVFPEPFIRGVNWSLNIAQSPHVAAMLR
Ga0311335_106216801	3300030838	Fen	SAAMRVAVGVAALATIVIGVFPEPFIRGVNWSLGIAQVPHVAAIMR
Ga0073994_100515661	3300030991	Soil	PVSLGMRCAVGVTALGTIVIGVYPEPFIRGVNWSLGIVQSPHVAAMVK
Ga0302180_105697323	3300031028	Palsa	CAVGLTALATIVIGIYPEPFIRSVNWSLNLAPTPRVASRLK
Ga0302326_107935841	3300031525	Palsa	LPISMGLRCAVGVTALATIVIGIYPEPFIRGVNWSIGITQAPRVAIRAK
Ga0310686_1094091292	3300031708	Soil	METERLPISLGMRCAVGVTAFATIVIGVYPEPFIRSVNWSLGIVQSPHVAAAMR
Ga0307475_105812551	3300031754	Hardwood Forest Soil	VSLGMRCAVGVTALATIVIGVYPEPFIRGVNWSLGIVQSPHVAAMVK
Ga0307479_107960351	3300031962	Hardwood Forest Soil	SLGMRCAVGVTALATIVIGVYPEPFIRGVNWSLGIVQSPHVAAMVK
Ga0311301_103569261	3300032160	Peatlands Soil	MRCAVGVTALATIVIGVYPEPFIRGVNWSLNIPQPPHVAAMLK
Ga0335081_101073501	3300032892	Soil	LGMRAALGVTALATIVIGVYPEPFIRTVNWSLGIAQTPHVAAMLR
Ga0335076_101955521	3300032955	Soil	NAMLIRAPMDTDRLPISAGMRAAIVLTAVATIVIGVFPEPFIRTVNWSLGIVQAPHVAAVMR
Ga0334790_187415_1_108	3300033887	Soil	ALATIVIGVFPEPFIRGVNWSLNIAQSPHVAAMLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082784

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences