Metagenome / Metatranscriptome Family F082781

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082781
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	76 residues
Representative Sequence	MATSTSKRQTVEAALSGMRRVDCVRMVEEDRPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRYERPRAESGVA
Number of Associated Samples	97
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.34 %
% of genes near scaffold ends (potentially truncated)	29.20 %
% of genes from short scaffolds (< 2000 bps)	92.04 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.336 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (9.735 % of family members)
Environment Ontology (ENVO)	Unclassified (38.938 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.407 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.65% β-sheet: 29.13% Coil/Unstructured: 59.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF04324	Fer2_BFD	45.13
PF01593	Amino_oxidase	7.08
PF02574	S-methyl_trans	7.08
PF00210	Ferritin	6.19
PF02390	Methyltransf_4	3.54
PF00440	TetR_N	3.54
PF13450	NAD_binding_8	3.54
PF00005	ABC_tran	1.77
PF00590	TP_methylase	0.88
PF06964	Alpha-L-AF_C	0.88
PF08448	PAS_4	0.88
PF02803	Thiolase_C	0.88
PF00664	ABC_membrane	0.88
PF00271	Helicase_C	0.88
PF00970	FAD_binding_6	0.88
PF00174	Oxidored_molyb	0.88
PF04120	Iron_permease	0.88
PF00196	GerE	0.88
PF00106	adh_short	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	7.08
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	7.08
COG0030	16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)	Translation, ribosomal structure and biogenesis [J]	3.54
COG0220	tRNA G46 N7-methylase TrmB	Translation, ribosomal structure and biogenesis [J]	3.54
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	3.54
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	3.54
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.88
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.88
COG3534	Alpha-L-arabinofuranosidase	Carbohydrate transport and metabolism [G]	0.88
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.88

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.34 %
Unclassified	root	N/A	25.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.34 %
Unclassified	root	N/A	25.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.34 %
Unclassified	root	N/A	25.66 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	41.59 %
Unclassified	root	N/A	25.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.65 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39.82 %
Unclassified	root	N/A	25.66 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.66 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	21.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.88 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.66 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	19.47 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	7.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	1.77 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.77 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.88 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.66 %
Iamiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	18.58 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.77 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1.77 %
Yoonia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Yoonia	0.88 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.66 %
Actinomarinicola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola	18.58 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1.77 %
Yoonia tamlensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Yoonia → Yoonia tamlensis	0.88 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.88 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.66 %
Actinomarinicola tropica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	18.58 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.42 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1.77 %
Amycolatopsis anabasis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis anabasis	0.88 %
Yoonia tamlensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Yoonia → Yoonia tamlensis	0.88 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02JCKTD	Not Available	538	Open in IMG/M
2170459009\|GA8DASG02HUMDF	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300000956\|JGI10216J12902_106809457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1093	Open in IMG/M
3300004114\|Ga0062593_100990615	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300004114\|Ga0062593_101429708	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300004156\|Ga0062589_101568331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	651	Open in IMG/M
3300004157\|Ga0062590_100308353	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300004479\|Ga0062595_102444014	Not Available	519	Open in IMG/M
3300005093\|Ga0062594_100397338	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300005093\|Ga0062594_100951728	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300005329\|Ga0070683_101457931	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005338\|Ga0068868_100516269	Not Available	1048	Open in IMG/M
3300005340\|Ga0070689_101866766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	548	Open in IMG/M
3300005356\|Ga0070674_102169448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	507	Open in IMG/M
3300005438\|Ga0070701_10867753	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005439\|Ga0070711_101351444	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300005439\|Ga0070711_101435307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300005441\|Ga0070700_100711466	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005458\|Ga0070681_11579807	Not Available	581	Open in IMG/M
3300005459\|Ga0068867_100468031	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1077	Open in IMG/M
3300005538\|Ga0070731_10993009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300005543\|Ga0070672_100863590	Not Available	798	Open in IMG/M
3300005544\|Ga0070686_100580372	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300005548\|Ga0070665_100982262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	857	Open in IMG/M
3300005615\|Ga0070702_101072743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	642	Open in IMG/M
3300005764\|Ga0066903_102274228	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300005764\|Ga0066903_108928576	Not Available	508	Open in IMG/M
3300005841\|Ga0068863_102386705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	538	Open in IMG/M
3300006046\|Ga0066652_100913010	Not Available	837	Open in IMG/M
3300006059\|Ga0075017_101332203	Not Available	564	Open in IMG/M
3300006059\|Ga0075017_101538768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300006354\|Ga0075021_10607182	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300006791\|Ga0066653_10245414	Not Available	912	Open in IMG/M
3300006797\|Ga0066659_11307052	Not Available	605	Open in IMG/M
3300006852\|Ga0075433_10969330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300006854\|Ga0075425_100123249	All Organisms → cellular organisms → Bacteria	2958	Open in IMG/M
3300006854\|Ga0075425_100297438	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300006854\|Ga0075425_101868654	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300006871\|Ga0075434_100496941	Not Available	1241	Open in IMG/M
3300006904\|Ga0075424_102486442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300007076\|Ga0075435_100142192	Not Available	2014	Open in IMG/M
3300007076\|Ga0075435_100625219	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300007076\|Ga0075435_101884137	Not Available	525	Open in IMG/M
3300009012\|Ga0066710_104153567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	541	Open in IMG/M
3300009137\|Ga0066709_103163964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	601	Open in IMG/M
3300009148\|Ga0105243_10297504	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300009156\|Ga0111538_10225791	All Organisms → cellular organisms → Bacteria	2373	Open in IMG/M
3300009176\|Ga0105242_10804535	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300009177\|Ga0105248_12087799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	644	Open in IMG/M
3300009545\|Ga0105237_10821453	All Organisms → cellular organisms → Bacteria → Terrabacteria group	936	Open in IMG/M
3300010376\|Ga0126381_100235492	Not Available	2471	Open in IMG/M
3300010400\|Ga0134122_12362923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	578	Open in IMG/M
3300012200\|Ga0137382_10051294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2577	Open in IMG/M
3300012205\|Ga0137362_11443035	Not Available	574	Open in IMG/M
3300012212\|Ga0150985_118108366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	502	Open in IMG/M
3300012395\|Ga0134044_1128248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300012400\|Ga0134048_1380813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	538	Open in IMG/M
3300012403\|Ga0134049_1196911	Not Available	511	Open in IMG/M
3300012469\|Ga0150984_109384772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300012685\|Ga0137397_10531076	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300012923\|Ga0137359_10471196	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300012924\|Ga0137413_11560780	Not Available	538	Open in IMG/M
3300012929\|Ga0137404_12082573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	530	Open in IMG/M
3300012930\|Ga0137407_10156623	Not Available	2017	Open in IMG/M
3300012958\|Ga0164299_10385998	Not Available	894	Open in IMG/M
3300013297\|Ga0157378_10642772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1076	Open in IMG/M
3300013306\|Ga0163162_10492279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1357	Open in IMG/M
3300013306\|Ga0163162_13483454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	501	Open in IMG/M
3300013772\|Ga0120158_10331375	Not Available	723	Open in IMG/M
3300014325\|Ga0163163_10575137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1190	Open in IMG/M
3300014325\|Ga0163163_10853742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis anabasis	974	Open in IMG/M
3300015242\|Ga0137412_11134982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Yoonia → Yoonia tamlensis	552	Open in IMG/M
3300015371\|Ga0132258_11895510	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300015371\|Ga0132258_13149821	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300015371\|Ga0132258_13177906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1134	Open in IMG/M
3300015374\|Ga0132255_101951133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	893	Open in IMG/M
3300017792\|Ga0163161_11910230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	528	Open in IMG/M
3300017959\|Ga0187779_11256838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300018029\|Ga0187787_10313598	Not Available	593	Open in IMG/M
3300018431\|Ga0066655_10486565	Not Available	816	Open in IMG/M
3300018476\|Ga0190274_13465781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	532	Open in IMG/M
3300019356\|Ga0173481_10028636	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300025927\|Ga0207687_11297148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	626	Open in IMG/M
3300025927\|Ga0207687_11778849	Not Available	528	Open in IMG/M
3300025934\|Ga0207686_10400142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1046	Open in IMG/M
3300025935\|Ga0207709_10186355	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300025936\|Ga0207670_11483084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300025936\|Ga0207670_11498876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	573	Open in IMG/M
3300026023\|Ga0207677_10374568	All Organisms → cellular organisms → Bacteria → Proteobacteria	1200	Open in IMG/M
3300026088\|Ga0207641_12471735	Not Available	518	Open in IMG/M
3300026089\|Ga0207648_10325909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1381	Open in IMG/M
3300026089\|Ga0207648_11486159	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300026118\|Ga0207675_101771159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	637	Open in IMG/M
3300026121\|Ga0207683_11892837	Not Available	545	Open in IMG/M
3300027907\|Ga0207428_10968638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	599	Open in IMG/M
3300028379\|Ga0268266_11402747	Not Available	674	Open in IMG/M
3300028380\|Ga0268265_12189994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	560	Open in IMG/M
3300028381\|Ga0268264_11356025	Not Available	722	Open in IMG/M
3300028592\|Ga0247822_11484344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	572	Open in IMG/M
3300028819\|Ga0307296_10402862	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300030294\|Ga0311349_11168599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	719	Open in IMG/M
3300031240\|Ga0265320_10223632	Not Available	838	Open in IMG/M
3300031250\|Ga0265331_10412390	Not Available	606	Open in IMG/M
3300031716\|Ga0310813_11213913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	695	Open in IMG/M
3300031847\|Ga0310907_10780803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	533	Open in IMG/M
3300031854\|Ga0310904_10972522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	603	Open in IMG/M
3300032003\|Ga0310897_10146904	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300032012\|Ga0310902_10220024	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300032180\|Ga0307471_104019765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	520	Open in IMG/M
3300032770\|Ga0335085_10000053	All Organisms → cellular organisms → Bacteria	392234	Open in IMG/M
3300032782\|Ga0335082_10651229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	915	Open in IMG/M
3300032954\|Ga0335083_10003522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20244	Open in IMG/M
3300033412\|Ga0310810_10103470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3392	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.52%
Host-Associated	Host-Associated	42.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.87%
Plants	Host-Associated → Plants	42.48%
Aquatic	Environmental → Aquatic	2.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.81%
Sediment	Environmental → Aquatic → Sediment	2.65%
Roots	Host-Associated → Plants → Roots	1.77%
Peat	Environmental → Terrestrial → Peat	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.70%
Loam	Environmental → Terrestrial → Soil → Loam	11.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.19%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.77%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.77%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.54%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.77%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_00782210	2065487018	Soil	VTSRKLHTVAGALSGLRRVDCVKMVEDDRPRFYVVGVGHRFPIEREVSPTVALTLLRKLPCRYEWRRPHEEAS
F47_08976740	2170459009	Grass Soil	MAASTRKRQSVEAALSGMRRIDCVRMVEDDQPRFFVVGIGHRFPVEREVSPTVALALLDSVPCHYERPHGRIRVV
JGI10216J12902_1068094573	3300000956	Soil	MARKQSTNRETKPLQSVAAAISGLRRVDCVKMVEDDRPRFFVVGVGHRVPIEREVSPAVALSLLNKLPCRYEWRGAHKAAS*
Ga0062593_1009906152	3300004114	Soil	VASTSNTTGSAAAPPQTVESAVAGMRRVDYVRMVEGARTRFFVVGVGHRLPVEREVNASVALALLESVPCRYERPRVEGRVA*
Ga0062593_1014297081	3300004114	Soil	MRSTRKLHTVAAALSGLRRVDCVKMVEDDRPRFFVVGVGHRFPIEREVSATVALTLLNKLPCRYEWRRPQKVAS*
Ga0062589_1015683312	3300004156	Soil	VRSRKLHTVAGALSGLRRVDCVKMVEDDRPRFYVVGVGHRFPIEREVSPTVALTLLGKLPCRYEWRRPREAVS*
Ga0062590_1003083534	3300004157	Soil	AAVASTSNTTGSAAAPPQTVESAVAGMRRVDYVRMVEGARTRFFVVGVGHRLPVEREVNASVALALLESVPCRYERPRVEGRVA*
Ga0062595_1024440142	3300004479	Soil	VTSRKLHTVAGALSGLRRVDCVKMVEDDRPRFYVVGVGHRFPIEREVSPTVALTLLRKLPCRYEWRRPHEEAS*
Ga0062594_1003973383	3300005093	Soil	MATSASKRQTVEAALTGMRRVDCVRMVEEDRPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRYERPRTESGVA*
Ga0062594_1009517282	3300005093	Soil	MRQRAASARKLHTVDAALSGLRRVDCVKMVEDDEPRFFVVGVGHRFPIEREVSPTVAFTLLNQLPCRYEWRRPQKAAS*
Ga0070683_1014579311	3300005329	Corn Rhizosphere	ASKAARKMHSVAAATAGMRRVECVKMVEEDRPRFFVVGVGHRFPIEREVTTSVALALMKSLPCRHEWKRAENDRAEKDVV*
Ga0068868_1005162692	3300005338	Miscanthus Rhizosphere	VKSTRKPHTVDAALSGLRRVDCVKMVEDERPRFFIVGVGHRFPIEREVSPTVAAVLLDELPCRYEWRRASDN*
Ga0070689_1018667661	3300005340	Switchgrass Rhizosphere	VASTSNTTGSAAAPPQTVESAVAGMRRVDYVRMVEGARARFFVVGVGHRLPVEREVNASVALALLESVPCRYQRPRVEGRVA*
Ga0070674_1021694482	3300005356	Miscanthus Rhizosphere	PQTVESAVAGMRRVDYVRMVEGPRTRFFVVGVGHRLPVEREVNASVALALLESVPCRYERPRVEGRVA*
Ga0070701_108677531	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VESAVAGMRRVDYVRMVEGARTRFFVVGVGHRLPVEREVNASVALALLESVPCRYERPRVEGRVA*
Ga0070711_1013514441	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VKASTHKVQTVATALSGMRRVDCVRMVEESTPRFFVVGIGHRFPVEREVSAAVANALLEDFPCRYERPRRESKVG*
Ga0070711_1014353071	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTAATRKRQSVEAALSGMRRVDCVRMVEEDQARFFVVGIGHRFPVEREVSPAVALALLDSVPCRYEWPHGRIRVV*
Ga0070700_1007114663	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRSTRKLHTVGAALSGLRRVDCVKMVEDDRPRFFVVGVGHRFPIEREVSATVALTLLNKLPCRYEWRRPQKAAS*
Ga0070681_115798071	3300005458	Corn Rhizosphere	SVAAATAGMRRVECVKMVEDDRPRFFVVGVGHRFPIEREVTTSVALALMKSLPCRHEWKRAEHERAEKDVV*
Ga0068867_1004680311	3300005459	Miscanthus Rhizosphere	MRQRAASARKLHTVDAALSGLRRVDCVKMVEDDEPRFFVVGVGHRFPIEREVSPTVAFTLLNQLPCRYEWRRPQK
Ga0070731_109930092	3300005538	Surface Soil	LTKCWYAAGVDRGAPVARSRKRHTVGAALSGLRRVDYIRMVEDDRPRFFVVGVGHRLPVEREVSPAVALALLDTVPCHYEHPRAGASV*
Ga0070672_1008635901	3300005543	Miscanthus Rhizosphere	VASTSNTTGSAAAPPQTVESAVAGMRRVDYVRMVEGARTRFFVVGVGHRLPVEREVNASVALALLESVP
Ga0070686_1005803721	3300005544	Switchgrass Rhizosphere	PGVMRQRAASARKLHTVDAALSGLRRVDCVKMVEDDEPRFFVVGVGHRFPIEREVSPTVAFTLLNQLPCRYEWRRPQKAAS*
Ga0070665_1009822622	3300005548	Switchgrass Rhizosphere	VRPASKVARKMHTVASATAGMRRVECVKMVEDERPRFFVVGVGHRLPIEREIDTTVALALMKTLPCRYAWKRAATDVV*
Ga0070702_1010727431	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	EDGRSAAVASTSNTTGSAAAPPQTVESAVAGMRRVDYVRMVEGARTRFFVVGVGHRLPVEREVNASVALALLESVPCRYERPRVEGRVA*
Ga0066903_1022742282	3300005764	Tropical Forest Soil	MAASTSKRPAVEAALSGMRRVDFLRMVEDDRPRFFLVGVGHRFPVEREVSPAVALALLDSVPWRYEHRRASAPI*
Ga0066903_1089285762	3300005764	Tropical Forest Soil	MARRRLGSVDVAISGMRRVDCIRMVEDAQPRFFVVGVGHRFPVEREVSPSVARALLAEVPCRYDWHRTEKNAS*
Ga0068863_1023867052	3300005841	Switchgrass Rhizosphere	MATSTSKRHSVAAALSGMRRVDCVRMVEEDRPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRYERPRTESGVA*
Ga0066652_1009130102	3300006046	Soil	VKSRKLHTVAGALSGLRRVDCVKMVEDDRPRFYVVGVGHRFPIEREVSPTVASSLLGKLPCRYEWRRPHEAAS*
Ga0075017_1013322032	3300006059	Watersheds	MAIGSPRKRHTVESAVSGMRRVDCVRMVEDSRPRFFVVGIGHRFPVEREVSPAVARALLEEFPCRYERPRQHIKR*
Ga0075017_1015387681	3300006059	Watersheds	VKSASAKQMRSVGAALSGMRRIDCVRMVEDDRPRFFVVGVGHRFPVEREVSPAVASALLETLPC
Ga0075021_106071822	3300006354	Watersheds	MAIGAASKRHTVESAVSGMRRVDCVRMVEDTRPRFFVVGIGHRFPVEREVSPAVARALLETFPCRYERPRRHSKG*
Ga0066653_102454141	3300006791	Soil	MAASTRKRQSVEAALSGMRRIDCVRMVEDDQPRFFVVGIGHRFPVEREVSPAVALALLDSVRCRYEWPHTESGVA*
Ga0066659_113070522	3300006797	Soil	MESTRTLHTVAAALSGLRRVDCVKMVEDDRPRFFVVGVGHRFPIEREVSPNVALTLLDRLPCRYEWRAQKAAS*
Ga0075433_109693302	3300006852	Populus Rhizosphere	MTASTRKRQSVEAVLSGMRRVDYVRMVEDDRPRFFVVGIGHRFPVEREVSPAVALALVDSVPFHYERPRTESGVA*
Ga0075425_1001232494	3300006854	Populus Rhizosphere	MATPASKRQTVEAALTGMRRVDCVRMVEEDRPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRYERPRTESGVA*
Ga0075425_1002974382	3300006854	Populus Rhizosphere	MTASTRKRQSVEAVLSGMRRVDYVRMVEDDRPRFFVVGIGHRFPVEREVSPAVALALVDSIPFHYERPRTESGVA*
Ga0075425_1018686542	3300006854	Populus Rhizosphere	VKSRKLHTVAGALSGLRRVDCVKMVEDDRPRFYVVGVGHRFPIEREVSPTVALTLLHKLPCRYEWRRPHEEAS*
Ga0075434_1004969412	3300006871	Populus Rhizosphere	MTASTSKRQSVEAVLSGMRRVDYVRMVEDDRPRFFVVGIGHRFPVEREVSPAVALALVDSIPFHYERPRTESGVA*
Ga0075424_1024864422	3300006904	Populus Rhizosphere	MTASTRKRQSVEAVLSGMRRVDYVRMVEDDRPRFFVVGIGHRFPVELEVSPAVALALVDSVRFHYERPRTESGVA*
Ga0075435_1001421921	3300007076	Populus Rhizosphere	MTASTRKRQSVEAVLSGMRRVDYVRMVEDDRPRFFVVGIGHRFPVEREVSPAVALALLDSVPFHYERLRTESGVA*
Ga0075435_1006252191	3300007076	Populus Rhizosphere	MATPASKRQAVEAALTGMRRVDCVRMVEEDRPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRYERPRTESGVA*
Ga0075435_1018841371	3300007076	Populus Rhizosphere	LAASTRKRQSVDAALSGMRRIDCVRMVEGDRPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRHEWPRTESGVA*
Ga0066710_1041535671	3300009012	Grasslands Soil	MTASTRKRQSVEAALSGMRRVDCVRMVEDDRPRFFVVGIGHRFPVEREVSPAVALALLDSLPFHYERPRTESGVA
Ga0066709_1031639641	3300009137	Grasslands Soil	PYDRGASMTASTRKRQSVEAALSGMRRVDCVRMVEDDRPRFFVVGIGHRFPVEREVSPAVALALLDSLPFHYERPRTESGVA*
Ga0105243_102975044	3300009148	Miscanthus Rhizosphere	MPTSASKRQTVEAALTGMRRVDCVRMVEEDRPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRYERPRTESGVA*
Ga0111538_102257911	3300009156	Populus Rhizosphere	STSNTTGSAAAPPQTVESAVAGMRRVDYVRMVEGARTRFFVVGVGHRLPVEREVNASVALALLESVPCRYERPRVEGRVA*
Ga0105242_108045353	3300009176	Miscanthus Rhizosphere	RQTVEAALSGMRRVDCVRMVEEDRPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRYERPRTESGVA*
Ga0105248_120877991	3300009177	Switchgrass Rhizosphere	HSVAAALSGMRRVDCVRMVEEDRPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRYERPRTESGVA*
Ga0105237_108214531	3300009545	Corn Rhizosphere	MRIPRDATSPRDGKTLHSVDAALSGLRRVDCVKMVEDDRPRFFVVGVGHRFPVEREVSPAVAFSLLNTLPCRYEWRHPLEKAS*
Ga0126381_1002354923	3300010376	Tropical Forest Soil	VNSSRRQDTVDRAISGMRRVDCVRMVEDDRPRFFVVGVGHRFPVEREISPAVARELLTEVPCHYEWRHNPRRAG*
Ga0134122_123629233	3300010400	Terrestrial Soil	ASKRQTVEAALTGMRRVDCVRMVEEDRPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRYERPRTESGVA*
Ga0137382_100512942	3300012200	Vadose Zone Soil	MAASTRKRQSVEAALSGMRRIDCVRMVEDDQPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRYEWPHTESGVA*
Ga0137362_114430352	3300012205	Vadose Zone Soil	MAASTRKPQSVEAALSGMRRIDCVRMVEDDQPRFFVVGIGHRFPVEREVSPAVALALLDSFPCRYEWPHTESGVT*
Ga0150985_1181083662	3300012212	Avena Fatua Rhizosphere	FGKEPAVESTKKLRTVESAVSGMRRLDCVRMVEDDRPRFYLVGVGHRFPIEREVSPGVAAVLLEQLPCRYERRGEKVS*
Ga0134044_11282482	3300012395	Grasslands Soil	GASMTASTRKRQSVEAALSGMRRVDCVRMVEDERPRFFVVGIGHRFPVEREVSPAIALALLDSVPFHYERPRTESGVA*
Ga0134048_13808132	3300012400	Grasslands Soil	RQDRGALMAASTRKRQSVEAALSGMRRIDCVRMVEDDQPRFFVVGIGHRFPVEREVSPAVALALLDSVRCRYEWPHTESGVA*
Ga0134049_11969111	3300012403	Grasslands Soil	TASTRKRQSVEAALSGMRRVDCVRMVEDERPRFFVVGIGHRFPVEREVSPAVALALLASVPFHYERPRTESGVA*
Ga0150984_1093847723	3300012469	Avena Fatua Rhizosphere	MASTRTSYTVDAALSGLRRVDCVKIVEASQPRFFVVGIGHRFPTEREVSAAVARALMDTVPCRYQWRRGEREVG*
Ga0137397_105310763	3300012685	Vadose Zone Soil	MAASTRKRQSLEAALSGMRRIDCVRMVEDDQPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRYEWPPTESGVA*
Ga0137359_104711961	3300012923	Vadose Zone Soil	MAASTRKRQSVEAALSGMRRIDCVRMVEDDQPRFFVVGIGHRFPVEREVSPAVALALLDSFPCRYEWPHTESGVA*
Ga0137413_115607801	3300012924	Vadose Zone Soil	MTTTRSTRKLHTVASAISGMRRVDCVRMVEDDRPRFYVVGVGHRFPVEREVSAAVARELLGSVPCRYEWRRAAADVI*
Ga0137404_120825731	3300012929	Vadose Zone Soil	MAASTRKRQSVEAALSGMRRIDCVRMVEDDQPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRYAWPHSESGVA*
Ga0137407_101566233	3300012930	Vadose Zone Soil	MKIARSPRKLDTVAAATSGLRRVDCVRMVEDRQPRFFVVGVGHRVPVEREITASVAHALLEEVPCRYEWRRPQPAH*
Ga0164299_103859982	3300012958	Soil	VTSRKLHTVAGALSGLRRVDCVKMVEDDRPRFYVVGIGHRFPIEREVSPTVALTLLGKLPCRYEWRRPQKAAS*
Ga0157378_106427724	3300013297	Miscanthus Rhizosphere	VEAALTGMRRVDCVRMVEEDRPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRYERPRTESGVA*
Ga0163162_104922792	3300013306	Switchgrass Rhizosphere	MRQRAASARKLHTVDEALSGLRRVDCVKMVEDDEPRFFVVGVGHRFPIEREVSPTVAFTLLNQLPCRYEWRRPQKAAS*
Ga0163162_134834541	3300013306	Switchgrass Rhizosphere	VRLGFPDKPRYAGVEHFSRSAAMASTTASNRIPATVESAVSGMRRIDCIRMVEGDRPRFFVVGVGHRFPVEREVSPSVARVLLDTVPCRYERPRVDGRVA*
Ga0120158_103313752	3300013772	Permafrost	MESTRTLHTVAAALSGLRRVDCVKMVEDDRPRFFVVGVGHRFPIEREVSANVALTLLDRLPCRYEWRAQKTAS*
Ga0163163_105751373	3300014325	Switchgrass Rhizosphere	MQSARESSREPRTLRTVDAALSGLRRVDCVKMVEDDRPRFFVVGVGHRFPIEREVSPAVAFTLLNKLPCRYEWRRAHKEAS*
Ga0163163_108537421	3300014325	Switchgrass Rhizosphere	MRQRAASARKLHTVDAALSGLRRVDCVKMVEDDEPRFFVVGVGHRFPIEREVSPTVAFTLLNRLPCRYEWRRPQQAAS*
Ga0137412_111349822	3300015242	Vadose Zone Soil	MAASTRKPQSVEAALSGMRRIDCVRMVEDDQPRFFVVGIGHRFPVEREVSPAVALALLDSFPCRYEWPHTESGVA
Ga0132258_118955102	3300015371	Arabidopsis Rhizosphere	MASTVERAVSGMRRVDYVRMVEGDRPRFFVVGVGHRLPVEREISASVALELLEMVPCRYDRPRVDRVVA*
Ga0132258_131498213	3300015371	Arabidopsis Rhizosphere	MATSTSKRQTVEAALSGMRRVDCVRMVEEDRPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRYERPRAESGVA*
Ga0132258_131779063	3300015371	Arabidopsis Rhizosphere	MRQRAASARKLHTVDAALSGLRRVDCVKMVEDDEPRFFVVGVGHRFPIEREISPTVAFTLLNQLPCRYEWRRPQKAAS*
Ga0132255_1019511332	3300015374	Arabidopsis Rhizosphere	MASTVERAVSGMRRVDYVRMVESDRPRFFVVGVGHRLPVEREISASVALELLEMVPCRYDRPRVDRVVA*
Ga0163161_119102302	3300017792	Switchgrass Rhizosphere	MATSASKRQTVEAALTGMRRVDCVRMVEEDRPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRYERPRTESGVA
Ga0187779_112568382	3300017959	Tropical Peatland	VAPTTKSTMPSTRKRQSVEAALSGLRRVDCIRMIEDDRPRFFVVGVGHRLPVEREVTPAVALALLDTVPCRYERPRAESRAG
Ga0187787_103135982	3300018029	Tropical Peatland	VKSTRKLHTVESAVSGMRRLDCVRMVEDARPRFYLVGIGHRFPVEREVSAGVAATLLEQLPCRYERHRAKAS
Ga0066655_104865652	3300018431	Grasslands Soil	MTASTRKRQSVEAALSGMRRVDCVRMVEDDRPRFFVVGIGHRFPVEREVSPAVALALLASVPFHYERPRTESGVA
Ga0190274_134657812	3300018476	Soil	MRSTRKLHTVAAALSGLRRVDCVKMVEDDRPRFFVVGVGHRSPIEREVSAKVALTLLNKLPCRYEWRRPQKAAS
Ga0173481_100286362	3300019356	Soil	MRSTRKLHTVAAALSGLRRVDCVKMVEDDRPRFFVVGVGHRFPIEREVSATVALTLLNKLPCRYEWRRPQKVAS
Ga0207687_112971481	3300025927	Miscanthus Rhizosphere	VASTSNTTGSAAAPPQTVESAVAGMRRVDYVRMVEGARTRFFVVGVGHRLPVEREVNASVALALLESVPCRYERPRVEGRVA
Ga0207687_117788492	3300025927	Miscanthus Rhizosphere	RKLHTVDAALSGLRRVDCVKMVEDDEPRFFVVGVGHRFPIEREVSPTVAFTLLNRLPCRYEWRRPQKAAS
Ga0207686_104001422	3300025934	Miscanthus Rhizosphere	MPGVMRQRAASARKLHTVDAALSGLRRVDCVKMVEDDEPRFFVVGVGHRFPIEREVSPTVAFTLLNQLPCRYEWRRPQKAAS
Ga0207709_101863551	3300025935	Miscanthus Rhizosphere	MATSASKRQTVEAALTGMRRIDCVRMVEEDRPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRYERPRTESGVA
Ga0207670_114830841	3300025936	Switchgrass Rhizosphere	MAASTRKRQSVDAALSGMRRVDCVRMVEEDRPRFFVVGIGHRFPVEREVSPAIALALLDSVPFRYERPRAESRVA
Ga0207670_114988762	3300025936	Switchgrass Rhizosphere	VASTSNTTGSAAAPPQTVESAVAGMRRVDYVRMVEGARARFFVVGVGHRLPVEREVNASVALALLESVPCRYQRPRVEGRVA
Ga0207677_103745682	3300026023	Miscanthus Rhizosphere	VKSTRKAHTVDAALSGLRRVDCVKMVEDERPRFFIVGVGHRFPIEREVSPTVAAVLLDELPCRYEWRRASDN
Ga0207641_124717351	3300026088	Switchgrass Rhizosphere	MATSTSKRHSVAAALSGMRRVDCVRMVEEDRPRFFVVGIGHRFPVEREVSPAVALALLDSVPCRYERPRTESGVA
Ga0207648_103259094	3300026089	Miscanthus Rhizosphere	MRQRAASARKLHTVDAALSGLRRVDCVKMVEDDEPRFFVVGVGHRFPIEREVSPTVAFTLLNQLPCRYEWRRPQKAAS
Ga0207648_114861591	3300026089	Miscanthus Rhizosphere	VASTSNTTGSAAAPPQTVESAVAGMRRVDYVRMVEGARTRFFVVGVGHRLPVEREVNGRV
Ga0207675_1017711592	3300026118	Switchgrass Rhizosphere	VMRRRAGSARKLHSVDAALSGLRRVDCVKMVEDDEPRFFVVGVGHRFPIEREVSPTVAFTLLNQLPCRYEWRRPQKAAS
Ga0207683_118928372	3300026121	Miscanthus Rhizosphere	MPGVMRQRAASARKLHTVDAALSGLRRVDCVKMVEDDEPRFFVVGVGHRFPIEREVSPTVAFTLLNRLPCRYEWRRPQKAAS
Ga0207428_109686382	3300027907	Populus Rhizosphere	RAILREDGRSAAVASTSNTTGSAAAPPQTVESAVAGMRRVDYVRMVEGARTRFFVVGVGHRLPVEREVNASVALALLESVPCRYERPRVEGRVA
Ga0268266_114027473	3300028379	Switchgrass Rhizosphere	MHTVASATAGMRRVECVKMVEDERPRFFVVGVGHRLPIEREIDTTVALALMKTLPCRYAWKRAATDVV
Ga0268265_121899941	3300028380	Switchgrass Rhizosphere	VASTSNTTGSAAASPQTVESAVAGMRRVDYVRMVEGARTRFFVVGVGHRLPVEREVNASVALALLESVPCRYERPRVEGRVA
Ga0268264_113560252	3300028381	Switchgrass Rhizosphere	VASTSNTTGSAAAPPQTVESAVAGMRRVDYVRMVEGARTRFFVVGVGHRLPVEREVNASVALALLESVPCRY
Ga0247822_114843442	3300028592	Soil	AILREDGRSAAVASTSNTTGSAAAPPQTVESAVAGMRRVDYVRMVEGARTRFFVVGVGHRLPVEREVNASVALALLESVPCRYERPRVEGRVA
Ga0307296_104028622	3300028819	Soil	MPGMKPTRKLHSVPAALSGLRRIDYVRIVEADQPRFFVVGVGHRFPTEREVSPTVARALLGELPCRYQWRRAVNEAS
Ga0311349_111685992	3300030294	Fen	VGSTRKPKLQTVESAVSGMRRVDYVRMVEDLQPRFFVVGSGHRFPVEREVSPAVALSLLESVPCRYERPRHSSLVA
Ga0265320_102236323	3300031240	Rhizosphere	MRYHGLMKSARKLHTVESAVSGMRRVDCVRMVEDVQPRFFVVGIGHRFPVEREVSPAVARELLERLPCQYEWRRTNKVAN
Ga0265331_104123901	3300031250	Rhizosphere	IASRVSLSVASATSGMRRIDFVKMVEDDGLRFFVVGVGHRNPVQREVSPAVARILMEQVPCRHEWRR
Ga0310813_112139132	3300031716	Soil	MESTRTLHTVGAALSGLRRVDYVKMVEDDRPRFFVVGVGHRFPIEREVSANVARTLLDRLPCRYEWRSQKQAS
Ga0310907_107808032	3300031847	Soil	PPQTVESAVAGMRRVDYVRMVEGARTRFFVVGVGHRLPVEREVNASVALALLESVPCRYERPRVEGRVA
Ga0310904_109725222	3300031854	Soil	MRSTRKLHTVAAALSGLRRVDCVKMVEDDRPRFFVVGVGHRFPIEREVSATVALTLLNKLPCRYEWRRAQKVAS
Ga0310897_101469043	3300032003	Soil	MRSTRKLHTVAAALSGLRRVDCVKMVEDDRPRFFVVGVGHRFPIEREVSATVALTLLNKLPCRYEWRRPQKLSS
Ga0310902_102200241	3300032012	Soil	STSNTTGSAAAPPQTVESAVAGMRRVDYVRMVEGARTRFFVVGVGHRLPVEREVNASVALALLESVPCRYERPRVEGRVA
Ga0307471_1040197652	3300032180	Hardwood Forest Soil	MTASTTKRQSVEAALSGMRRVDCVRMVEDDQPRFFVVGIGHRFPVEREVSPAVALALLDSIPCRYERPRAESGVA
Ga0335085_10000053373	3300032770	Soil	MHTRRRDPVEAAISGMRRVDCVRMVEDVRPRFFVVGVGHRFPVEREVSPAVARVLMAQVPCHHEWHHADKAVR
Ga0335082_106512292	3300032782	Soil	MRNRRPDPVEAAISGMRRVDCVRMVEDLRPRFFVVGVGHRFPVEREVSPAVARALLSEVPCRYEWRRARRRAS
Ga0335083_100035221	3300032954	Soil	MHTRRRDPVEAAISGMRRVDCVRMVEDVRPRFFVVGVGHRFPVEREVSPAVARVLMAQVPCHHEWHHADK
Ga0310810_101034704	3300033412	Soil	MESTRTLHTVGAALSGLRRVDYLKMVEDDRPRFFVVGVGHRFPIEREVSANVARTLLDRLPCRYEWRSQKQAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082781

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences