NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F082740

Metagenome / Metatranscriptome Family F082740

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F082740
Family Type Metagenome / Metatranscriptome
Number of Sequences 113
Average Sequence Length 80 residues
Representative Sequence MGHRLDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKWGDEDWVAFALHDFTPLRSISSCQRARPPEYSYAGKR
Number of Associated Samples 95
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 84.07 %
% of genes near scaffold ends (potentially truncated) 17.70 %
% of genes from short scaffolds (< 2000 bps) 84.96 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction Yes
3D model pTM-score0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (95.575 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(8.850 % of family members)
Environment Ontology (ENVO) Unclassified
(30.088 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(39.823 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.74%    β-sheet: 29.63%    Coil/Unstructured: 54.63%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.67
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF04226Transgly_assoc 25.66
PF13453zf-TFIIB 4.42
PF13410GST_C_2 3.54
PF07676PD40 3.54
PF07883Cupin_2 3.54
PF13361UvrD_C 1.77
PF01266DAO 1.77
PF00326Peptidase_S9 1.77
PF13419HAD_2 0.88
PF13242Hydrolase_like 0.88
PF01066CDP-OH_P_transf 0.88
PF07332Phage_holin_3_6 0.88
PF00211Guanylate_cyc 0.88
PF03621MbtH 0.88
PF05019Coq4 0.88
PF00571CBS 0.88
PF00034Cytochrom_C 0.88
PF07635PSCyt1 0.88
PF00196GerE 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 113 Family Scaffolds
COG2261Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein familyGeneral function prediction only [R] 25.66
COG0558Phosphatidylglycerophosphate synthaseLipid transport and metabolism [I] 0.88
COG1183Phosphatidylserine synthaseLipid transport and metabolism [I] 0.88
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.88
COG3251MbtH family protein, regulates adenylation domains of NRPSsSecondary metabolites biosynthesis, transport and catabolism [Q] 0.88
COG5031Ubiquinone biosynthesis protein Coq4Coenzyme transport and metabolism [H] 0.88
COG5050sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferasesLipid transport and metabolism [I] 0.88

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.58 %
UnclassifiedrootN/A4.42 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_113923970All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria695Open in IMG/M
3300000956|JGI10216J12902_118957803All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300001686|C688J18823_11040732All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium519Open in IMG/M
3300004114|Ga0062593_100414906All Organisms → cellular organisms → Bacteria1210Open in IMG/M
3300005330|Ga0070690_100266418All Organisms → cellular organisms → Bacteria1217Open in IMG/M
3300005332|Ga0066388_100541058All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1795Open in IMG/M
3300005332|Ga0066388_100932647All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1442Open in IMG/M
3300005334|Ga0068869_100147659All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1821Open in IMG/M
3300005334|Ga0068869_101071442All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria704Open in IMG/M
3300005338|Ga0068868_100546649All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300005436|Ga0070713_100681122All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium981Open in IMG/M
3300005536|Ga0070697_101405907All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria623Open in IMG/M
3300005577|Ga0068857_100749400All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium930Open in IMG/M
3300005617|Ga0068859_100346131All Organisms → cellular organisms → Bacteria1581Open in IMG/M
3300005840|Ga0068870_11419191All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria509Open in IMG/M
3300005843|Ga0068860_101846675All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium626Open in IMG/M
3300006046|Ga0066652_100452851All Organisms → cellular organisms → Bacteria1182Open in IMG/M
3300006358|Ga0068871_102091128All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium539Open in IMG/M
3300006755|Ga0079222_10340678All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1006Open in IMG/M
3300006806|Ga0079220_10978258All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300006845|Ga0075421_101841950All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria650Open in IMG/M
3300006854|Ga0075425_100335981All Organisms → cellular organisms → Bacteria1739Open in IMG/M
3300006854|Ga0075425_103001691All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300006880|Ga0075429_100371474All Organisms → cellular organisms → Bacteria1252Open in IMG/M
3300006918|Ga0079216_10813970All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300006930|Ga0079303_10123010All Organisms → cellular organisms → Bacteria997Open in IMG/M
3300006969|Ga0075419_10657648All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium740Open in IMG/M
3300006969|Ga0075419_11024376All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria602Open in IMG/M
3300007076|Ga0075435_100851117All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria794Open in IMG/M
3300007788|Ga0099795_10204348All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300007790|Ga0105679_10981206All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1199Open in IMG/M
3300009111|Ga0115026_10034464All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2648Open in IMG/M
3300009120|Ga0117941_1003186All Organisms → cellular organisms → Bacteria5184Open in IMG/M
3300009148|Ga0105243_10098708All Organisms → cellular organisms → Bacteria2420Open in IMG/M
3300009148|Ga0105243_12891176All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium521Open in IMG/M
3300009167|Ga0113563_10259632All Organisms → cellular organisms → Bacteria1774Open in IMG/M
3300009167|Ga0113563_10450719All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1389Open in IMG/M
3300009177|Ga0105248_12852121All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium551Open in IMG/M
3300009545|Ga0105237_11714389All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium636Open in IMG/M
3300009792|Ga0126374_10200241All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1262Open in IMG/M
3300009870|Ga0131092_10475790All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1132Open in IMG/M
3300010043|Ga0126380_11452334All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium605Open in IMG/M
3300010043|Ga0126380_11866544All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium545Open in IMG/M
3300010047|Ga0126382_10269410Not Available1259Open in IMG/M
3300010301|Ga0134070_10140540All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium861Open in IMG/M
3300010337|Ga0134062_10014315All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2961Open in IMG/M
3300010358|Ga0126370_12283008All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium535Open in IMG/M
3300010359|Ga0126376_12525372All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium562Open in IMG/M
3300010360|Ga0126372_10540019All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1105Open in IMG/M
3300010362|Ga0126377_10426404All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1344Open in IMG/M
3300010362|Ga0126377_10817889All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium991Open in IMG/M
3300010373|Ga0134128_11622493All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1712Open in IMG/M
3300010403|Ga0134123_13058996All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium536Open in IMG/M
3300010869|Ga0126359_1386712All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium526Open in IMG/M
3300012212|Ga0150985_110270967All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300012212|Ga0150985_117312377All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium529Open in IMG/M
3300012212|Ga0150985_121754165All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium534Open in IMG/M
3300012469|Ga0150984_100162202All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium584Open in IMG/M
3300012469|Ga0150984_103880677All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300012469|Ga0150984_107356797All Organisms → cellular organisms → Bacteria1210Open in IMG/M
3300012469|Ga0150984_115653588All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300012892|Ga0157294_10030612All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1122Open in IMG/M
3300012929|Ga0137404_11623753All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium600Open in IMG/M
3300012940|Ga0164243_10020824All Organisms → cellular organisms → Bacteria → Proteobacteria8710Open in IMG/M
3300012944|Ga0137410_10068480All Organisms → cellular organisms → Bacteria2568Open in IMG/M
3300014325|Ga0163163_10342287All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1551Open in IMG/M
3300015200|Ga0173480_10136175Not Available1238Open in IMG/M
3300015214|Ga0172382_10422044Not Available1000Open in IMG/M
3300015245|Ga0137409_10416066All Organisms → cellular organisms → Bacteria1161Open in IMG/M
3300015371|Ga0132258_12249140All Organisms → cellular organisms → Bacteria1368Open in IMG/M
3300018083|Ga0184628_10262762All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium907Open in IMG/M
3300018432|Ga0190275_11231357All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium824Open in IMG/M
3300018476|Ga0190274_10064039All Organisms → cellular organisms → Bacteria2738Open in IMG/M
3300018931|Ga0193601_1059338All Organisms → cellular organisms → Bacteria1150Open in IMG/M
3300019874|Ga0193744_1004404All Organisms → cellular organisms → Bacteria2562Open in IMG/M
3300019874|Ga0193744_1051527All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria788Open in IMG/M
3300020027|Ga0193752_1199131All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales761Open in IMG/M
3300020027|Ga0193752_1209970Not Available734Open in IMG/M
3300021057|Ga0196981_1081319All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria502Open in IMG/M
3300021377|Ga0213874_10051650All Organisms → cellular organisms → Bacteria1263Open in IMG/M
3300021408|Ga0193708_1009667All Organisms → cellular organisms → Bacteria2447Open in IMG/M
3300021445|Ga0182009_10317112All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria789Open in IMG/M
3300022886|Ga0247746_1016522All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1571Open in IMG/M
3300022915|Ga0247790_10000147All Organisms → cellular organisms → Bacteria37390Open in IMG/M
3300024323|Ga0247666_1024378All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1284Open in IMG/M
3300025324|Ga0209640_10202464All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1686Open in IMG/M
3300025900|Ga0207710_10478905All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium644Open in IMG/M
3300025918|Ga0207662_10334226All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1014Open in IMG/M
3300025930|Ga0207701_10263028All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1503Open in IMG/M
3300025934|Ga0207686_11243495All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium610Open in IMG/M
3300025936|Ga0207670_10444002All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1045Open in IMG/M
3300026023|Ga0207677_10160197All Organisms → cellular organisms → Bacteria1747Open in IMG/M
3300027715|Ga0208665_10205136All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria620Open in IMG/M
3300027811|Ga0256868_10111390All Organisms → cellular organisms → Bacteria1212Open in IMG/M
3300027877|Ga0209293_10079619All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1433Open in IMG/M
3300028138|Ga0247684_1049157All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium681Open in IMG/M
3300028794|Ga0307515_10130184All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2778Open in IMG/M
3300031054|Ga0102746_10880479All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria776Open in IMG/M
3300031228|Ga0299914_10471799All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1087Open in IMG/M
3300031238|Ga0265332_10052094All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1758Open in IMG/M
3300031507|Ga0307509_10367485All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1156Open in IMG/M
3300031507|Ga0307509_10505471All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium892Open in IMG/M
3300031616|Ga0307508_10052785All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3610Open in IMG/M
3300031715|Ga0307476_10004763All Organisms → cellular organisms → Bacteria8167Open in IMG/M
3300031901|Ga0307406_10011847All Organisms → cellular organisms → Bacteria → Proteobacteria4955Open in IMG/M
3300031911|Ga0307412_11286442All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria658Open in IMG/M
3300031996|Ga0308176_10471852All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1268Open in IMG/M
3300032126|Ga0307415_100213563All Organisms → cellular organisms → Bacteria1541Open in IMG/M
3300032180|Ga0307471_101257189All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria903Open in IMG/M
3300033408|Ga0316605_10098827All Organisms → cellular organisms → Bacteria2247Open in IMG/M
3300033408|Ga0316605_10166499Not Available1813Open in IMG/M
3300033489|Ga0299912_10077892All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales2904Open in IMG/M
3300034268|Ga0372943_0003164All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium8225Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil7.96%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.19%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.42%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.54%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza3.54%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere3.54%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.65%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.65%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere2.65%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.65%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland1.77%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.77%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.77%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.77%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.77%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.77%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.77%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.77%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil1.77%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface1.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.77%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.89%
Lake SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.89%
CompostEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Compost0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.89%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.89%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.89%
Landfill LeachateEngineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate0.89%
Activated SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge0.89%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300006930Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWCEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009120Lake sediment microbial communities from Tanners Lake, St. Paul, MNEnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009870Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plantEngineeredOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010869Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012940Organic Plus compost microbial communities from Emeryville, California, USA - Original compost - Organic plus compost (OP)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015214Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R metaGEngineeredOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018931Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 9 hrs after wetting v1EnvironmentalOpen in IMG/M
3300019874Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1EnvironmentalOpen in IMG/M
3300020027Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1EnvironmentalOpen in IMG/M
3300021057Soil microbial communities from Anza Borrego desert, Southern California, United States - S3_20-13CEnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021408Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c1EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022886Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5EnvironmentalOpen in IMG/M
3300022915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4EnvironmentalOpen in IMG/M
3300024323Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027715Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)EnvironmentalOpen in IMG/M
3300027811Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeqEnvironmentalOpen in IMG/M
3300027877Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300028138Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25EnvironmentalOpen in IMG/M
3300028794Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EMHost-AssociatedOpen in IMG/M
3300031054Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 1C (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031228Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57EnvironmentalOpen in IMG/M
3300031238Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaGHost-AssociatedOpen in IMG/M
3300031507Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EMHost-AssociatedOpen in IMG/M
3300031616Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EMHost-AssociatedOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300033489Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_11392397023300000956SoilMGHRLDRGDVIDMLEESVIRGIPVHIVMQDGREFDDRVRDIGKWEGEDYVAFAEHEFTPLRQISTIRRAWPVEHTYDGKR*
JGI10216J12902_11895780333300000956SoilMGHRLDRGDVIDMLEESQIRGIPIEIHLRDGRKFEDRVKEIGKLDGEDFVVFKDHEATQLRRISDVRRAWPVEHTYDGKH*
C688J18823_1104073213300001686SoilMGHRFDRGDVIDMLEESAIRRIPVVVQLRNGRVFEDRVTDIGKWGEEDWVAFALHDFTPLRSISSCQRASPPAYTYAGKR*
Ga0062593_10041490613300004114SoilMGHRLDRGDLIDMLEESRMRRIPLTVTLRDGRTFDDRVTDIGKWEGEDHVAFADHEFTPLRRISSCRRAWPVEHTYAGKH*
Ga0070690_10026641823300005330Switchgrass RhizosphereMGHRFDRGDVIDMLEESAIRRIPVVVQLRNGRTFEDRVTDIGKWGEEDWVAFALHDFTPLRSISSCQRARPPAYTYAGKR*
Ga0066388_10054105833300005332Tropical Forest SoilMGHRLDRGDVIDMLEESQLKRAPVIVALRDGRVFEDRVQQIGKYEGEDHVAFAQHELIPLRRISSVRRARPPELTYAGKRV*
Ga0066388_10093264723300005332Tropical Forest SoilMGHRFDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKWGDEDWVAFALHDFTPLRSITSCQRARPPSYSYSGKR*
Ga0068869_10014765943300005334Miscanthus RhizosphereMGHRLDRGDVIDMLEESAIRHIPVVVQLRDGRVFEDRVTDIGKWQDEDWVAFAQHDFTPLRTISSCQRAVPPAHSYAGKR*
Ga0068869_10107144213300005334Miscanthus RhizosphereMGHRLDRGDVIDMLEESQLRHAPVIVALRDGRVFEDRVQQIGKYEGEDHVAFAQHELIPLRRIASVRRARPPELTYAGKRV*
Ga0068868_10054664933300005338Miscanthus RhizosphereMGHRFDRGDVIDMLEESAIRRIPVVVQLRNGRVFEDRVTDIGKWGEEDWVAFALHDFTPLRSISSCQRARPPAYTYAGKR*
Ga0070713_10068112213300005436Corn, Switchgrass And Miscanthus RhizosphereMGHRLDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKWGDEDWVAFALHDFTPLRSISSCQRARPPEYSYAGKR*
Ga0070697_10140590713300005536Corn, Switchgrass And Miscanthus RhizosphereMGHRLDRGDVIDMLEESQLRRAPVIVALRDGRVFEDRVQQIGKFEGEDHVAFAQHELIPLRRITSVRRARPPELTYAGKRV*
Ga0068857_10074940023300005577Corn RhizosphereMAHRFDRGDVIDMLEESAIRRIPVVVQLRDGRRFEDRVTDIGKWGEEDWVAFALHDFTPLRLISSCQRARPPAYTYAGKR*
Ga0068859_10034613133300005617Switchgrass RhizosphereMGHRFDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKWGDQDWVAFAQHDFTPLRTISSCQRAVPPAHSYAGKR*
Ga0068870_1141919123300005840Miscanthus RhizosphereMGHRLDRGDVIDMLEESALRRIPIVVELKNGQLFEDRVTEISKWNGEDHVAFSKHELTPLRRISKCSRAWPVEHTYAGKR*
Ga0068860_10184667523300005843Switchgrass RhizosphereMGHRLDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKWGDEDWVAFALHDFTPLRSITSCQ
Ga0066652_10045285143300006046SoilMGHRLDRGDVIDMLEESAMRRRPFVVELKNGHMFEDHVTDITKWNGEDHVAFSKHEFTPLRRISRCYRAWPVEHTYAGKR*
Ga0068871_10209112823300006358Miscanthus RhizosphereMGHRFDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKWENEDWVAFAQHDFTPLRAITSCQRAQPPAYSYAGKR*
Ga0079222_1034067813300006755Agricultural SoilMGHRFDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVADIGKWGDEDWVAFALHDFTPLRSITSCQRARPPSYSYAGKR*
Ga0079220_1097825813300006806Agricultural SoilMGHRFDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKWGDEDWVAFALHDFTPLRSICSDTTPGFGVKTVGS*
Ga0075421_10184195023300006845Populus RhizosphereMGHRLDRGDVIDMLEESLLRHAPVIVELRNGRVFEDRVQQIGKYEGEDHVAFAQHELTPLRRISSVR
Ga0075425_10033598133300006854Populus RhizosphereMGHRLDRGDVIDMLEESQLRRSPMIVALRDGRVFEDRVQQIGKFEGEDHVAFAQHELIPLRRISSVRRARPPELTYAGKRV*
Ga0075425_10300169113300006854Populus RhizosphereLMGHRFDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKWGDEDWVAFALHDFTPLRSITSCQRARPPSYSYAGKR*
Ga0075429_10037147423300006880Populus RhizosphereMGHRLDRGDVIDMLEESLLRHAPVIVELRNGRVFEDRVQQIGKYEGEDHVAFAQHELTPLRRISSVRRARPPELTYAGKRM*
Ga0079216_1081397023300006918Agricultural SoilMGHRLDVGDVIDMLEESRMRRIPVRVTLRDGSIFEDRVTDIGKWEGEDHVAFRDHEFTPIRRISTIQRAWPVEHTYAGKH*
Ga0079303_1012301023300006930Deep SubsurfaceMGHRLDRGDVIDMLEESVIRRTPVVVVMQDGRIFEDRVKEIGKWEGEDYVAFADHEFTPLRRITSCRRAWPPELTYAGKR*
Ga0075419_1065764823300006969Populus RhizosphereDVIDMLEESVLRHSPVIIELRDGRVFEDRVQQIGKYEGEDHVAFAQHELIALRRISSVRRARPPELTYAGKRL*
Ga0075419_1102437613300006969Populus RhizosphereMGHRLDRGDVIDMLEESLLRHAPVIVELRNGRVFEDRVQQIGKYEGEDHVAFAQHELTPLRRISSVRRARPPELTYAGKR
Ga0075435_10085111723300007076Populus RhizosphereMGHRLDRGDVIDMLEESQLRRSPVIVALRDGRVFEDRVQQIGKFEGEDHVAFAQHELIPLRRISSVRRARPPELTYAGKRV*
Ga0099795_1020434823300007788Vadose Zone SoilMGHRFDSGDVIDMLEESAIRRIPVVVQLRNGRVFEDRVTDIGKWGEEDWVAFALHDFTPLRSISSCQRAWPPAYTYAGKR*
Ga0105679_1098120633300007790SoilMGHRFDRGDVIDMLEESALLRIPVVVILQDGRMFEDRVQEIGKWEGEDYVAFADHEFTPLRQISSCRRARPPEYTYAGKR*
Ga0115026_1003446433300009111WetlandMWFGARFEKGDIMGHRLDRGDVIDMLEESVIRRTPVVVVMQDGRIFEDRVKEIGKWEGEDYVAFADHEFTPLRRITSCRRAWPPELTYAGKR*
Ga0117941_100318633300009120Lake SedimentMGHRYDRGDVIDMLEESQLRRIPVVVELRDGRTFEDRVQEIGKWEGEDYVAFADHEFTPLRQISQCRRAWPPELTYAGKR*
Ga0105243_1009870813300009148Miscanthus RhizosphereVIDMLEESAIRHIPVVVQLRDGRVFEDRVTDIGKWQDEDWVAFAQHDFTPLRTISSCQRAVPPAHSYAGKR*
Ga0105243_1289117623300009148Miscanthus RhizosphereMGHRFDRGDVIDMLEESAIRRIPVVVQLRNGRTFEDRVTDIGKWGEEDWVAFALHDFTPLRSISSCQRAWPPSYTYAGKR*
Ga0113563_1025963223300009167Freshwater WetlandsMWFGAGFEKGDIMGHRLDRGDVIDMLEESVIRRTPVVVVMQDGRIFEDRVKEIGKWEGEDYVAFADHEFTPLRRITSCRRAWPPELTYAGKR*
Ga0113563_1045071923300009167Freshwater WetlandsMGHRLDRGDVIDMLEESMIRGIPVVVELRDGRKFEDRVRDIGKWDGEDHVAFADHEFTPLRQISGIQRAWPPEYTYAGKR*
Ga0105248_1285212123300009177Switchgrass RhizosphereMGHRFDRGDVIDMLEESAIRRIPVVVRLRNGRVFEDRITHIGKWGEEDWVAFALHDFTPLRSISSCQHARPPAYTYAAKRWRIATERSSGRATSG
Ga0105237_1171438913300009545Corn RhizosphereMGHRFDRGDVIDMLEESAIRHTPVVVQLRNGRVFEDRVTDIGKWGEEDWVAFALHDFTPLRSISS
Ga0126374_1020024133300009792Tropical Forest SoilMGHRFDRGDVIDMLEESAIRRIPVVVQLRNGRTFEDRVTDIGKWGDEDWVAFALHDFTPLRSISSCQRARPPAYTYAGKR*
Ga0131092_1047579023300009870Activated SludgeMGHRIDRGDVIDMLEESITLRIPVVVELQDGRKFEDRVTQIGKFNGEDHVAFHDHEFTPLRQISRTARAVPREYSYAGKR*
Ga0126380_1145233423300010043Tropical Forest SoilMGHRFDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKWGDEDWVAFALHDFTPLRSISSCQRARPPAYSYAGKR*
Ga0126380_1186654423300010043Tropical Forest SoilMGHRFDRGDVIDMLEESAIRRIPVVVQLRNGRTFEDRVTDIGKWGEEDWVAFALHDFTPLRSISSCQRAWPPAYTYAGKR*
Ga0126382_1026941023300010047Tropical Forest SoilMGHRFDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKWGDQDWVAFAQHDFTPLRTISSCQRAWPPVYTYAGKR*
Ga0134070_1014054023300010301Grasslands SoilMGHRLDRGDVIDMLEESVIKRMPVVVLLQDGCTFEDRVKDIGKWDGEDYVAFADHEFTPLRQISSCRRAWPLEHTYAGKR*
Ga0134062_1001431523300010337Grasslands SoilMGHRFDRGDVIDMLEESAIRRIPVVVLLRDGRVFEDRVTDIGKWDGEDWVAFAQHDFTPLRSISSCQRARPPVYTYAGKR*
Ga0126370_1228300823300010358Tropical Forest SoilMGHRFDRGDVIDMLEESAIRRIPVIVQLRDGRVFEDRVTDIGKWGDEDWVAFALHDFTPLRSISSCQRARPPAYSYAGKR*
Ga0126376_1252537223300010359Tropical Forest SoilMGHRFDRGDVIDMLEESAIRRIPVVVQLRNGRVFEDRVTDIGKWGEEDWVAFALHDFTPLRAISSCQRAWPPVYTYAGKR*
Ga0126372_1054001923300010360Tropical Forest SoilMGHRFDRGDVIDMLEESAIRRIPVVVQLRNGRTFEDRVTDIGKWGDEDWVAFALHDFTPLRSISSCQRAWPPAYTYAGKR*
Ga0126377_1042640433300010362Tropical Forest SoilMGHRLDRGDVIDMIEESVLRRIPFEVTLKDGRVFEDRATQIAKWNGEDHVAFADHEPTPLRRIASVRRAWPLEHTYAGKY*
Ga0126377_1081788923300010362Tropical Forest SoilMGHRFDRGDVIDMLEESAIRRIPVVVQLRNGRVFEDRVTDIGKWGEEDWVAFALHDFTPLRSISSCQRARPPAYSYAGKR*
Ga0134128_1162249313300010373Terrestrial SoilHRLDRGDVIDMLEESAMRRIPVVVELRDGRVFEDRVTDIGKYRDEDWVAFVDHEFTPLRSISSCRRARPPEYTYAGKR*
Ga0134123_1305899613300010403Terrestrial SoilMGHRFDRGDVIDMLEESAIRRIPVVVQLRNGRVFEDRVTDIGKWGEEDWVAFALHDFTPLRSISSCQRAR
Ga0126359_138671213300010869Boreal Forest SoilMGHRFDRGDVIDMLEESAIRHIPVVVQLRDGRVFEDRVTDIGKWRDEDWVAFALHDFTRLRAISSCQRAWPPVYTYAGKR*
Ga0150985_11027096733300012212Avena Fatua RhizosphereMGHRLDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKYNDEDWVAFAMHDFTPLRSISSCQRARPPEYTYAGKR*
Ga0150985_11731237723300012212Avena Fatua RhizosphereGHRFDRGDVIDMLEESAILHTPVVVQLRNGRGFEDRVTDIGKWGEEDWVAFALHDFTPLRSISSCQRAWPPSYTYAGKR*
Ga0150985_12175416513300012212Avena Fatua RhizosphereIMGHRLDRGDVIDMLEESQIRRIPMRVTLRDGRTFEDRVTDIGKWDGEDHVAFADHEFTPLRRISSVARALPLEHTYAGKH*
Ga0150984_10016220213300012469Avena Fatua RhizosphereMGHRLDRGDVIDMLEESAIRHIPVVVQLRDGRVFEDRVTDIGKWQDEGWVAFAQHDFTPLRTISSCQRAVPPAHSYAGKR*
Ga0150984_10388067723300012469Avena Fatua RhizosphereVLFRSMGHRFDRGDVIDMLEESAMRKIPVVVHLHDGRVFEDRVTDIGKYQEQDWVAFAQHDFTPLKDITSCQRARPPEYSYAGKR*
Ga0150984_10735679733300012469Avena Fatua RhizosphereYVPMGHRFDRGDVIDMLEESAIRRIPVVVQLRNGRVFEDRVTDIGKWGEEDWVAFALHDFTPLRSISSCQRASPPAYTYAGKR*
Ga0150984_11565358823300012469Avena Fatua RhizosphereIMGHRLDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKYNDEDWVAFAMHDFTPLRSISSCQRARPPEYTYAGKR*
Ga0157294_1003061213300012892SoilLATRTDRARLREKEETMGHRLDRGDVIDMLEESVIRGIPVHIVMQDGREFDDRVRDIGKWEGEDYVAFAEHEFTPLRQISTIRRAWPVVHTYDGKR*
Ga0137404_1162375323300012929Vadose Zone SoilMGHRFDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKWENEDWVAFAQHDFTPLRAITSCQRAQPPAY
Ga0164243_1002082473300012940CompostMDRGDVIDMLEESRIRGIPVVVELRGGKRFEDRVTDIGKWDGEDHVAFADHEFTPLRQISKCMRAFPPEYTYAGKR*
Ga0137410_1006848013300012944Vadose Zone SoilMAHRFDRGDVIDMLEESAIRRIPVVVQLRNGRVFEDRVTDIGKWGEEDWVAFALHDFTPLRSISSCQRAWPPSYTYAGKR*
Ga0163163_1034228723300014325Switchgrass RhizosphereMGHRFDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKWGDQDWVAFAQHDFTPLRTISSCQRARPPVYTYAGKR*
Ga0173480_1013617533300015200SoilMGHRLDRGDVIDMLEESVIRGIPVHIVMQDGREFDDRVRDIGKWEGEDYVAFAEHEFTPLRQISTIRRAWPVVHTYDGKR*
Ga0172382_1042204423300015214Landfill LeachateMGHRIDRGDVIDMLEESRIRGTPVIVELRGGKRFEDRVTDIGKWDGEDHVAFADHEFTPLRQISQCLRAYPPEYTYAGKR*
Ga0137409_1041606643300015245Vadose Zone SoilMGHRLDRGDVIDMLEESAMRRIPVVVELRDGRVFEDRVTDIGKWQDEDWVAFVDHEFTPLRSISGCRRAQPPSHSYAGKR*
Ga0132258_1224914023300015371Arabidopsis RhizosphereMGHRLDRGDVIDMLEESITLKIPVVVELKDGHTFEDRVTDISKLDGEDHVEFQLHELTPLRHISRTARAYPPSHSYAGKR*
Ga0184628_1026276223300018083Groundwater SedimentMGHRFDRGDTIDMLEESAIRRIPVVVHLRDGRVFEDRVTEISKWRDEDWVAFVDHEFTPLRTISSCRRAQPPTYSYAGKR
Ga0190275_1123135723300018432SoilMGHRMDIGDFIDMLEESKMRRLPVRIELRDGRVFEDRVTDIGKWEGEDQVAFADHEFTPIRRISSIRRAFPVEHTYAGKR
Ga0190274_1006403943300018476SoilMGHRIDRGDVIDMLEESVIRRTPVVVVMKDGHTFEDRVKDIGKWDGEDYVAFADHEFTPLRQISSCRRAVAPEYTYAGKI
Ga0193601_105933823300018931SoilMGHRLDRGDVIDMLEESVIRRAPVVVVLQDGRTFEDRVKEIGKYEGEDYVAFQDHEFTPLRRISSCRRAQPPEYTYNGKR
Ga0193744_100440463300019874SoilEESAIRRIPVVVQLRDGRVFEDRVTDIGKWGDEDWVAFALHDFTPLRAISSCQRARPPAYSYAGKR
Ga0193744_105152723300019874SoilMGHRFDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKWGDEDWVAFALHDFTPLRAISSCQRARPPEYSYAGKR
Ga0193752_119913133300020027SoilGHRLDRGDVIDMLEESQLRGIPVEIHLRDGRKFEDRVKEIGKLDDEDIVVFADHESALLRRISNVRRAWPVEHTYAGKH
Ga0193752_120997013300020027SoilMGHRIDRGDVIDMLEESVTLRAPVVVVLQDGRIFEDRVKEIGKWEGEDWVAFADHEFTPLRQISSCRRARPPEYTYAGKV
Ga0196981_108131913300021057SoilMGHRIDRGDVIDMLEESITLKIPVVVELQDGRKFEDRVTQIGKYNGEDHVAFHDHEFTPLRQISRTARAVPREYTYAGKR
Ga0213874_1005165023300021377Plant RootsMGHRLDRGDVIDMLEESVMRKIPVVVELRDGRVFEDRVTDIGKYHDEDWVAFADHEFTPLRSISSCGRARPPEYTYAGKR
Ga0193708_100966733300021408SoilMGHRLDRGDVIDMLEESQLRGIPVEVQLRHGHKFEDRVREIGKVDGEDVVVFAQHEATPLRRISNVRRAWPVEHTYAGKQPS
Ga0182009_1031711213300021445SoilMGHRFDRGDVIDMLEESAIRHTPVVVQLRNGRVFEDRVTDIGKWGEEDWVAFALHDFTPLRSISSCQRAWPPAYTYAGKR
Ga0247746_101652223300022886SoilMGHRLDRGDVIDMLEESAIRRIPLVIELKNGHLFEDHVTDIAKWQGEDHVAFSQHELTPLRRISKCYRAWPVEHTYAGKR
Ga0247790_1000014793300022915SoilMGHRLDRGDVIDMLEESAMRRTPLVVALKNGQQFEDRVTDIAKWNGEDHVAFSRHELTPLRRIARCARAWPLEHTYAGKR
Ga0247666_102437823300024323SoilMGHRFDRGDVIDMLEESAIRRIPVVVQLRHGHVFEDRVTDIGKWGDQDWVAFAQHDFTPLRAISSCQRAWPPVYTYAGKR
Ga0209640_1020246433300025324SoilMGHRLDLGDVIDMLEESAIRRIPMIIELKNGQMFEDRVTDIAKWNGEDHVAFVHHEFTPLRRIAKCYRAWPVEYTYAGKH
Ga0207710_1047890523300025900Switchgrass RhizosphereMGHRLDRGDVIDMLEESAIRHIPVVVQLRDGRVFEDRVTDIGKWQDEDWVAFAQHDFTPLRTISSCQRAVPPAHSYAGKR
Ga0207662_1033422613300025918Switchgrass RhizosphereMGHRLDRGDVIDMLEESQLRHAPVIVALRDGRVFEDRVQQIGKYEGEDHVAFAQHELIPLRRIASVRRARPPELTYAGKRV
Ga0207701_1026302813300025930Corn, Switchgrass And Miscanthus RhizosphereMGHRFDRGDVIDMLEESAIRRIPVVVQLRNGRTFEDRVTDIGKWGEEDWVAFALHDFTPLRSISSCQRARPPAYTYAGKR
Ga0207686_1124349523300025934Miscanthus RhizosphereMGHRLDRGDVIDMLEESVMRRIPIVIELRDGRTFEDRATEIGQWNGEDHVAFALHEFVPLRRIASTRRAIPPTYSYAGKR
Ga0207670_1044400223300025936Switchgrass RhizosphereMGHRLDRGDVIDMLEESALRRIPIVVELKNGQLFEDRVTEISKWNGEDHVAFSKHELTPLRRISKCARAWPLEHTYAGKR
Ga0207677_1016019713300026023Miscanthus RhizosphereMGHRFDRGDVIDMLEEPAIRRIPVVVQLRNGRTFEDRVTDIGKWGEEDWVAFALHDFTPLRSISSCQRARPPAYTYAGKR
Ga0208665_1020513623300027715Deep SubsurfaceMWFGAGFEKGDIMGHRLDRGDVIDMLEESVIRRTPVVVVMQDGRIFEDRVKEIGKWEGEDYVAFADHEFTPLRRITSCRRAWPPELTYAGKR
Ga0256868_1011139023300027811SoilMGHRLDRGDLIDMLEESALRRIPMIVTLRRGPTFEDFVTDIGKWDGEDHVAFAAHEFTPLRRISNCRRAWPIEYTYAGKH
Ga0209293_1007961933300027877WetlandMGHRLDRGDVIDMLEESVIRRTPVVVVMQDGRIFEDRVKEIGKWEGEDYVAFADHEFTPLRRITSCRRAWPPELTYAGKR
Ga0247684_104915713300028138SoilMGHRLDRGDVIDMLEESAIRRIPVVVELRGGHVFEDRVTDIGKWHDEDWVAFAMHDFTPLRSIASCRRAQPPAHSYAGKR
Ga0307515_1013018423300028794EctomycorrhizaMGHRLDRGDVIDMLEESAIRRIPVVVQLRDGHVFEDRVTDIGKWHDEDWVAFAQHDFTPLRAISSCQRAQPPTYSYAGKR
Ga0102746_1088047913300031054SoilGHRFDRGDVIDMLEESAIRRIPVVVQLRNGRVFEDRVTDIGKWGEEDWVAFALHDFTPLRSISSCQRASPPAYTYAGKR
Ga0299914_1047179923300031228SoilMGHRLDRGDVIDMLEESQLRRIPVLITLRHGREFEDRVKDIGKWEGEDHVAFALHEFTPLRQISKCRRAWPIEYTYKGKR
Ga0265332_1005209433300031238RhizosphereMAHRFDRGDVIDMLEESAIRRIPVVVQLRNGHVFEDRVTDIGKWGEEDWVAFARHDFTPLRSISSCQRAWPPAYSYAGKRV
Ga0307509_1036748523300031507EctomycorrhizaMGHRFDRGDVIDMLEESAMRKIPVVVHLHDGRVFEDRVTDIGKYENEDWVAFAQHDFTPLKDITSCQRARPPEYSYAGKR
Ga0307509_1050547133300031507EctomycorrhizaMGHRLDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKWHDEDWVAFAMHDFTPLRSISSCQRARPPEYTYAGKR
Ga0307508_1005278523300031616EctomycorrhizaMGHRFDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKWGNEDWVAFALHDFTPLRAISSCQRAWPPVYSYAGKR
Ga0307476_10004763103300031715Hardwood Forest SoilMGHRFDRGDVIDMLEESAIRRIPVVVQLRNGRVFEDRVTDIGKWGEEDWVAFALHDFTPLRSISSCQRASPPAYTYAGKR
Ga0307406_1001184753300031901RhizosphereMGHRLDRGDVIDMLEESVMRHTPIVVELKNGQLFEDRATDIGKWNGEDHVAFSQHEYTPLRRISKLYRAWPLEHTYAGKR
Ga0307412_1128644223300031911RhizosphereMSHRLDRGDVIDMLEESAMRRIPLVVELKNGHQFEDHVTEIAKWEGEDHVAFSKHELTPLRRITRCSRAWPVEHTYAGKR
Ga0308176_1047185233300031996SoilMGHRLDRGDVIDMLEESAIRRIPVVVQLRDGRVFEDRVTDIGKYNDEDWVAFAMHDFTPLRSISSCQRARPPEYTYSGKR
Ga0307415_10021356323300032126RhizosphereMSHRLDRGDVIDMLEESAMRRIPLVVELKNGHQFEDHVTEIAKWEGEDHVAFSKHELTPLRRIARCSRAWPVEHTYAGKR
Ga0307471_10125718923300032180Hardwood Forest SoilMAHRFDRGDVIDMLEESAIRRIPVVVQLRNGRTFEDRVTDIGKWGEEDWVAFALHDFTPLRSISSCQRARPPAYSYAGKR
Ga0316605_1009882733300033408SoilMGHRLDRGDVIDMLEESMIRGIPVVVELRDGRKFEDRVRDIGKWDGEDHVAFADHEFTPLRQISGIQRAWPPEYTYAGKR
Ga0316605_1016649943300033408SoilMGHRLDRGDVIDMLEESVIRRMPVVVVMEDGRIFEDRVKEIGKWEGEDYVAFADHEFTPLRRITSCRRAWPPELTYAGKR
Ga0299912_1007789233300033489SoilMGHRLDRGDLIDMLEESALRRRPMIVTLRGGPTFEDFVTDIGKWDGEDHVAFAAHEFTPLRRISNCRRAWPIEYTYAGKH
Ga0372943_0003164_7959_82013300034268SoilMGHRFDRGDVIDMLEESALLRIPVVVQLRDGRVFEDRVTDIGKWQDEDWVAFALHDFTPLRTISSCQRAQPPTYSYAGKR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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