NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F082722

Metagenome / Metatranscriptome Family F082722

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F082722
Family Type Metagenome / Metatranscriptome
Number of Sequences 113
Average Sequence Length 46 residues
Representative Sequence MIKKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG
Number of Associated Samples 76
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 67.57 %
% of genes near scaffold ends (potentially truncated) 43.36 %
% of genes from short scaffolds (< 2000 bps) 88.50 %
Associated GOLD sequencing projects 57
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (66.372 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(61.062 % of family members)
Environment Ontology (ENVO) Unclassified
(68.142 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(80.531 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 16.67%    β-sheet: 6.25%    Coil/Unstructured: 77.08%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF136402OG-FeII_Oxy_3 3.54



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A66.37 %
unclassified Hyphomonasno rankunclassified Hyphomonas30.97 %
All OrganismsrootAll Organisms2.65 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10194870Not Available654Open in IMG/M
3300001748|JGI11772J19994_1026076Not Available801Open in IMG/M
3300005512|Ga0074648_1022942unclassified Hyphomonas → Hyphomonas sp.3404Open in IMG/M
3300005611|Ga0074647_1004066Not Available3861Open in IMG/M
3300006025|Ga0075474_10046315Not Available1481Open in IMG/M
3300006025|Ga0075474_10068363Not Available1177Open in IMG/M
3300006026|Ga0075478_10029807unclassified Hyphomonas → Hyphomonas sp.1822Open in IMG/M
3300006026|Ga0075478_10088261unclassified Hyphomonas → Hyphomonas sp.995Open in IMG/M
3300006027|Ga0075462_10083035unclassified Hyphomonas → Hyphomonas sp.1003Open in IMG/M
3300006027|Ga0075462_10142694Not Available733Open in IMG/M
3300006029|Ga0075466_1101071Not Available782Open in IMG/M
3300006405|Ga0075510_10673305All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon550Open in IMG/M
3300006637|Ga0075461_10204287Not Available591Open in IMG/M
3300006802|Ga0070749_10127125Not Available1494Open in IMG/M
3300006802|Ga0070749_10129654unclassified Hyphomonas → Hyphomonas sp.1477Open in IMG/M
3300006802|Ga0070749_10489176Not Available671Open in IMG/M
3300006802|Ga0070749_10493805Not Available667Open in IMG/M
3300006802|Ga0070749_10673409Not Available554Open in IMG/M
3300006810|Ga0070754_10099236unclassified Hyphomonas → Hyphomonas sp.1441Open in IMG/M
3300006810|Ga0070754_10343268Not Available662Open in IMG/M
3300006810|Ga0070754_10475729Not Available540Open in IMG/M
3300006867|Ga0075476_10035472unclassified Hyphomonas → Hyphomonas sp.2073Open in IMG/M
3300006867|Ga0075476_10179013Not Available780Open in IMG/M
3300006869|Ga0075477_10326000unclassified Hyphomonas → Hyphomonas sp.606Open in IMG/M
3300006874|Ga0075475_10127753Not Available1129Open in IMG/M
3300006874|Ga0075475_10331466Not Available622Open in IMG/M
3300006916|Ga0070750_10335679unclassified Hyphomonas → Hyphomonas sp.640Open in IMG/M
3300006916|Ga0070750_10372813Not Available599Open in IMG/M
3300006919|Ga0070746_10260259unclassified Hyphomonas → Hyphomonas sp.807Open in IMG/M
3300006919|Ga0070746_10372493Not Available644Open in IMG/M
3300006919|Ga0070746_10471984Not Available555Open in IMG/M
3300006920|Ga0070748_1130493unclassified Hyphomonas → Hyphomonas sp.943Open in IMG/M
3300007234|Ga0075460_10080281Not Available1190Open in IMG/M
3300007236|Ga0075463_10120705Not Available846Open in IMG/M
3300007345|Ga0070752_1250605Not Available688Open in IMG/M
3300007346|Ga0070753_1208929Not Available720Open in IMG/M
3300007538|Ga0099851_1164409Not Available821Open in IMG/M
3300007539|Ga0099849_1203355Not Available744Open in IMG/M
3300007541|Ga0099848_1214856unclassified Hyphomonas → Hyphomonas sp.685Open in IMG/M
3300007640|Ga0070751_1330475Not Available563Open in IMG/M
3300007960|Ga0099850_1200043Not Available786Open in IMG/M
3300008012|Ga0075480_10205372unclassified Hyphomonas → Hyphomonas sp.1039Open in IMG/M
3300008012|Ga0075480_10228560Not Available971Open in IMG/M
3300009001|Ga0102963_1234465Not Available728Open in IMG/M
3300009001|Ga0102963_1349886unclassified Hyphomonas → Hyphomonas sp.580Open in IMG/M
3300009027|Ga0102957_1306282unclassified Hyphomonas → Hyphomonas sp.582Open in IMG/M
3300009027|Ga0102957_1327715Not Available563Open in IMG/M
3300009149|Ga0114918_10112117unclassified Hyphomonas → Hyphomonas sp.1676Open in IMG/M
3300010296|Ga0129348_1281034Not Available557Open in IMG/M
3300010297|Ga0129345_1349616Not Available509Open in IMG/M
3300010299|Ga0129342_1195853Not Available719Open in IMG/M
3300010299|Ga0129342_1236044Not Available640Open in IMG/M
3300010316|Ga0136655_1155503Not Available682Open in IMG/M
3300010368|Ga0129324_10294527unclassified Hyphomonas → Hyphomonas sp.639Open in IMG/M
3300013010|Ga0129327_10823027Not Available528Open in IMG/M
3300017950|Ga0181607_10014217Not Available6259Open in IMG/M
3300017962|Ga0181581_10713812Not Available602Open in IMG/M
3300017963|Ga0180437_10296658unclassified Hyphomonas → Hyphomonas sp.1232Open in IMG/M
3300017964|Ga0181589_10569118Not Available724Open in IMG/M
3300017967|Ga0181590_10141958Not Available1844Open in IMG/M
3300017967|Ga0181590_10828369Not Available614Open in IMG/M
3300017987|Ga0180431_10231578unclassified Hyphomonas → Hyphomonas sp.1388Open in IMG/M
3300017991|Ga0180434_11204814Not Available567Open in IMG/M
3300018080|Ga0180433_10327864unclassified Hyphomonas → Hyphomonas sp.1199Open in IMG/M
3300018416|Ga0181553_10055324unclassified Hyphomonas → Hyphomonas sp.2610Open in IMG/M
3300018421|Ga0181592_10492233Not Available849Open in IMG/M
3300018424|Ga0181591_10178764Not Available1682Open in IMG/M
3300019708|Ga0194016_1015535Not Available819Open in IMG/M
3300019765|Ga0194024_1095184Not Available679Open in IMG/M
3300021957|Ga0222717_10108111unclassified Hyphomonas → Hyphomonas sp.1732Open in IMG/M
3300021957|Ga0222717_10217865Not Available1124Open in IMG/M
3300021958|Ga0222718_10041433Not Available2990Open in IMG/M
3300021958|Ga0222718_10112622Not Available1586Open in IMG/M
3300021958|Ga0222718_10149303unclassified Hyphomonas → Hyphomonas sp.1321Open in IMG/M
3300021958|Ga0222718_10253570unclassified Hyphomonas → Hyphomonas sp.933Open in IMG/M
3300021958|Ga0222718_10613429Not Available508Open in IMG/M
3300021964|Ga0222719_10541746unclassified Hyphomonas → Hyphomonas sp.689Open in IMG/M
3300021964|Ga0222719_10716648unclassified Hyphomonas → Hyphomonas sp.562Open in IMG/M
3300021964|Ga0222719_10827138Not Available506Open in IMG/M
3300022063|Ga0212029_1050437Not Available602Open in IMG/M
3300022068|Ga0212021_1004489unclassified Hyphomonas → Hyphomonas sp.2045Open in IMG/M
3300022176|Ga0212031_1056968Not Available660Open in IMG/M
3300022183|Ga0196891_1021359unclassified Hyphomonas → Hyphomonas sp.1235Open in IMG/M
3300022183|Ga0196891_1052009unclassified Hyphomonas → Hyphomonas sp.744Open in IMG/M
3300022187|Ga0196899_1014230All Organisms → Viruses3063Open in IMG/M
3300022200|Ga0196901_1146045Not Available791Open in IMG/M
3300022200|Ga0196901_1171170Not Available712Open in IMG/M
3300022200|Ga0196901_1193410Not Available656Open in IMG/M
3300022200|Ga0196901_1244756Not Available558Open in IMG/M
3300024262|Ga0210003_1099562unclassified Hyphomonas → Hyphomonas sp.1325Open in IMG/M
3300025543|Ga0208303_1025951Not Available1607Open in IMG/M
3300025543|Ga0208303_1037909Not Available1238Open in IMG/M
3300025610|Ga0208149_1007130Not Available3562Open in IMG/M
3300025647|Ga0208160_1175405Not Available503Open in IMG/M
3300025671|Ga0208898_1086196Not Available995Open in IMG/M
3300025671|Ga0208898_1091110Not Available952Open in IMG/M
3300025671|Ga0208898_1120443unclassified Hyphomonas → Hyphomonas sp.759Open in IMG/M
3300025759|Ga0208899_1105441Not Available1043Open in IMG/M
3300025769|Ga0208767_1037414Not Available2411Open in IMG/M
3300025818|Ga0208542_1097911Not Available848Open in IMG/M
3300025828|Ga0208547_1058048unclassified Hyphomonas → Hyphomonas sp.1310Open in IMG/M
3300025840|Ga0208917_1240381Not Available585Open in IMG/M
3300025889|Ga0208644_1100990Not Available1420Open in IMG/M
3300025889|Ga0208644_1348905Not Available565Open in IMG/M
3300026187|Ga0209929_1029228All Organisms → Viruses → Predicted Viral1669Open in IMG/M
3300026187|Ga0209929_1097860Not Available765Open in IMG/M
3300027917|Ga0209536_100358885unclassified Hyphomonas → Hyphomonas sp.1822Open in IMG/M
3300034374|Ga0348335_023814Not Available2859Open in IMG/M
3300034374|Ga0348335_087506unclassified Hyphomonas → Hyphomonas sp.1026Open in IMG/M
3300034374|Ga0348335_101025Not Available907Open in IMG/M
3300034375|Ga0348336_091769unclassified Hyphomonas → Hyphomonas sp.1059Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous61.06%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water8.85%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh7.08%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient6.19%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water5.31%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment3.54%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface1.77%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment1.77%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.89%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.89%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.89%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.89%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300001748Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)EnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005611Saline surface water microbial communities from Etoliko Lagoon, GreeceEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006405Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017963Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaGEnvironmentalOpen in IMG/M
3300017964Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017987Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_1 metaGEnvironmentalOpen in IMG/M
3300017991Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_2 metaGEnvironmentalOpen in IMG/M
3300018080Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaGEnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019708Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_2-3_MGEnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022063Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022176Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025818Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025828Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300026187Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1019487023300000116MarineMIKECKNCKRKEDYKGQFDCEHWVEDQAVILCDDCFFNDLYKTGKKDE*
JGI11772J19994_102607613300001748Saline Water And SedimentGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNGKL*
Ga0074648_102294253300005512Saline Water And SedimentMIKKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG*
Ga0074647_100406663300005611Saline Water And SedimentMIKKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNGKL*
Ga0075474_1004631553300006025AqueousMIRKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG*
Ga0075474_1006836333300006025AqueousQFDCEDWSEDQIVILCDDCFFNDLYKKDDSSRKFLR*
Ga0075478_1002980733300006026AqueousMIKECKNCKRKEDYEGQFDCEDWNEDQVVILCDDCFFNDLFNKGESNG*
Ga0075478_1008826133300006026AqueousMIRKCGNCKREEDHEGQFDCEDWNEDQNAVLLCDDCFFNDLYKVKLDNK*
Ga0075462_1008303523300006027AqueousMIKECKNCKRKEDYEGQFDCEHWVEDQAVILCDDCFFNDLFNEKKDE*
Ga0075462_1014269433300006027AqueousMIRKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKTGKKDE*
Ga0075466_110107123300006029AqueousMIRKCGNCKREEDHEGQFDCEDWSEDQAVILCDDCFFNDLYKKGESNGKL*
Ga0075510_1067330523300006405AqueousMIRKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKG
Ga0075461_1020428723300006637AqueousMIKECKNCKRKEDYEGQFDCEHWVEDQVVILCDDCFFNDLFNKGESNG*
Ga0070749_1012712513300006802AqueousMIRKCGNCKREEDHEGQFDCEDWSEDQIVILCDDCFFNDLYKKDDSSRKFLR*
Ga0070749_1012965443300006802AqueousMIKKCGNCKREEDHEDQFDCEDWNEDQAVILCDDCFFNNLYKKGESND*
Ga0070749_1048917633300006802AqueousMIKECKNCKRKEDHEDQFDCEDWSEDQVVILCDDCFFNDLYNKRKKDE*
Ga0070749_1049380543300006802AqueousREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG*
Ga0070749_1067340913300006802AqueousRSLERRKMIRKCGNCKREEDHEGQFDCEDWSEDQAVILCDDCFFNDLYKKGESNG*
Ga0070754_1009923643300006810AqueousMIKKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNNLYKKGESND*
Ga0070754_1034326823300006810AqueousMIRKCGNCKREEDYENQFDCEDWSEDQIVILCDDCFFNDLYKKDDSSRKFLR*
Ga0070754_1047572933300006810AqueousMIRKCSNCEREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKTGKKDE*
Ga0075476_1003547233300006867AqueousMIRKCGNCKREEDYEGQFDCEDWSEDQIVILCDDCFFNDLYKKDDSSRKFLR*
Ga0075476_1017901313300006867AqueousCSNCEREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG*
Ga0075477_1032600023300006869AqueousMIRKCDNCKRKEDYEGQFDCEHWVEDQVVILCDDCFFNDLFNKGESNG*
Ga0075475_1012775313300006874AqueousCKREEDHEGQFDCEDWNEDQVVILCDDCFFNDLFNKGESNG*
Ga0075475_1033146613300006874AqueousNCEREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG*
Ga0070750_1033567923300006916AqueousMIKECKNCKRKEDYEGQFDCEDWNEDQAVILCDDCFFNDLYKKG
Ga0070750_1037281313300006916AqueousEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG*
Ga0070746_1026025913300006919AqueousMIKECKNCKRKEDYEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESN
Ga0070746_1037249313300006919AqueousRKMIRKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKTGKKDE*
Ga0070746_1047198423300006919AqueousMIKECKNCKRKEDYEGQFDCEDWNENQTVILCDDCFFNDLYKTGKKDE*
Ga0070748_113049323300006920AqueousMIRKCGNCEREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNGKL*
Ga0075460_1008028113300007234AqueousHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG*
Ga0075463_1012070543300007236AqueousNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG*
Ga0070745_133273333300007344AqueousLTTPTWSLERRIMIKECKNCKRKEDYEGQFDCEHWVEDQAVILCDDCFFNDLFNEKKDE*
Ga0070752_125060533300007345AqueousMIRKCGNCKREEDYEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG*
Ga0070753_120892913300007346AqueousRKMIRKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG*
Ga0099851_116440913300007538AqueousECKNCKRKEDYEGQFDCEHWVEDQVVILCDDCFFNDLFNEKKDE*
Ga0099849_120335533300007539AqueousCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG*
Ga0099847_112975533300007540AqueousLTTPTWSLERRIMIKECKNCKRKEDHEGQFDCEHWVEDQEAVILCDDCFFNDLFNEKKDE
Ga0099848_121485623300007541AqueousMIRKCGNCEREEDHEGQFDCEDWNEDQAVILCDDCFFND
Ga0070751_133047533300007640AqueousMIKECKNCKRKEDYEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG*
Ga0099850_120004313300007960AqueousRIMIKECKNCKRKEDYEGQFDCEHWVEDQVVILCDDCFFNDLFNEKKDE*
Ga0075480_1020537213300008012AqueousMIKKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFF
Ga0075480_1022856033300008012AqueousMIRKCSNCEREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG*
Ga0102963_123446513300009001Pond WaterKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG*
Ga0102963_134988613300009001Pond WaterMIRECKNCKRKENYEGQYDCEDWSEDQVVILCDDCFFNDLYNKGESNGKL*
Ga0102957_130628223300009027Pond WaterMIRECKNCKRKEDYEGQFDCEDWNEDQVVILCDDCFFNDLY
Ga0102957_132771523300009027Pond WaterMIKKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYNKGESNGKL*
Ga0114918_1011211723300009149Deep SubsurfaceMIKECKNCKRKEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNDIL*
Ga0129348_128103413300010296Freshwater To Marine Saline GradientMIKECKNCKRKEDHEGQFDCEHWVEDQAVILCDDCFFNDLYKTGKKDE*
Ga0129345_134961613300010297Freshwater To Marine Saline GradientIKECKNCKRKEDHEDQFDCEDWSEDQVVILCDDCFFNDLYKTRKKDE*
Ga0129342_119585313300010299Freshwater To Marine Saline GradientWSLERRIMIKECKNCKRKEDYEGQFDCEHWVEDQAVILCDDCFFNDLYKKGESND*
Ga0129342_123604443300010299Freshwater To Marine Saline GradientCEREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG*
Ga0136655_115550333300010316Freshwater To Marine Saline GradientERRIMIKECKNCKRKEDYEGQFDCEDWNEDQAVILCDDCFFNDLFNEKKDE*
Ga0129324_1029452723300010368Freshwater To Marine Saline GradientMIKECKNCKRKEDHEDQFDCEDWSEDQVVILCDDCFFNDLY
Ga0129327_1082302723300013010Freshwater To Marine Saline GradientMIKECKNCKRKEDYEGQFDCEDWNEDQAVILCDDCFFNDLFNEKKDE*
Ga0181607_10014217193300017950Salt MarshMIRKCGNCKREEDHEGQFDCEDWSEDQAVILCDDCFFNDLYKKGESNG
Ga0181581_1071381213300017962Salt MarshCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNGKL
Ga0180437_1029665823300017963Hypersaline Lake SedimentMIRKCGNCKREEDYEGQFDCEDWNEDQAIILCDDCFFNDLYKKGESNG
Ga0181589_1056911823300017964Salt MarshMIRKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNGKL
Ga0181590_1014195863300017967Salt MarshCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG
Ga0181590_1082836913300017967Salt MarshEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNGKL
Ga0180431_1023157833300017987Hypersaline Lake SedimentMIKECKNCKRKEDHEDQFDCEDWSEDQVVILCDDCFFNDLYNKRKKDE
Ga0180434_1120481423300017991Hypersaline Lake SedimentMIRECKNCKRKENYEGQYDCEDWSEDQVVILCDDCFFNDLYNKGESNGKL
Ga0180433_1032786433300018080Hypersaline Lake SedimentMIKECKNCKRKEDHEDQFDCEDWSEDQVVILCDDCFFNDLYNKKKSNE
Ga0181553_1005532483300018416Salt MarshMIRKCGNCEREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGEINGKL
Ga0181592_1049223313300018421Salt MarshDHEGQFDCEDWSEDQAVILCDDCFFNDLYKKGESNG
Ga0181591_1017876453300018424Salt MarshNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG
Ga0194016_101553533300019708SedimentMIRKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKTGKKDE
Ga0194024_109518433300019765FreshwaterMIKECKNCKRKEDYEGQFDCEHWVEDQVVILCDDCFFNDLFNEKKDE
Ga0222717_1010811133300021957Estuarine WaterMIKKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG
Ga0222717_1021786543300021957Estuarine WaterMIRKCGNCKREEDHEGQYDCEDWSEDQVVILCDDCFFNDLYNKGESNGKL
Ga0222718_1004143373300021958Estuarine WaterMIKKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYNKGEKNG
Ga0222718_1011262263300021958Estuarine WaterMIKKCGNCKREEDHEGQFDCEDWSEDQNAVLLCDDCFFNDLYKVKLDNK
Ga0222718_1014930323300021958Estuarine WaterMIRECKNCKRKEDYEGQFDCEDWNEDQVVILCDDCFFNDLYKKGESNGKM
Ga0222718_1025357013300021958Estuarine WaterMIKKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYK
Ga0222718_1061342913300021958Estuarine WaterMIRECKNCKRKEDYEGQFDCEDWNEDQVVILCDDCFFNDLYNKGESNGKL
Ga0222719_1054174623300021964Estuarine WaterMIRKCGNCKREEDHEGQFDCEDWNEDQNAVLLCDDCFFNDLYKVKLDNK
Ga0222719_1071664813300021964Estuarine WaterMIKKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFN
Ga0222719_1082713813300021964Estuarine WaterMLKQCDNCKREENHEGQFDCEHWVEDQNAVLLCDDCFFNDLYKGESND
Ga0212029_105043723300022063AqueousMIKECKNCKRKEDHEGQFDCEDWNEDQVVILCDDCFFNDLYKKGESNG
Ga0212021_100448943300022068AqueousMIRKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG
Ga0212031_105696833300022176AqueousMIKECKNCKRKEDHEDQFDCEDWSEDQVVILCDDCFFNDLYKTRKKDE
Ga0196891_102135933300022183AqueousMIRKCGNCEREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNGKL
Ga0196891_105200913300022183AqueousMIKECKNCKRKEDYEGQFDCEHWVEDQAVILCDDCFFNDLFNEKKDE
Ga0196899_101423083300022187AqueousMIRKCGNCKREEDYEGQFDCEDWSEDQIVILCDDCFFNDLYKKDDSSRKFLR
Ga0196901_114604513300022200AqueousMIRKCSNCEREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG
Ga0196901_117117013300022200AqueousKNCKRKEDYEGQFDCEHWVEDQVVILCDDCFFNDLFNEKKDE
Ga0196901_119341013300022200AqueousMIKECKNCKRKEDYEGQFDCEHWVEDQAVILCDDCFFNDLYKKGESND
Ga0196901_124475633300022200AqueousAGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNGKL
Ga0210003_109956223300024262Deep SubsurfaceMIKECKNCKRKEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNDIL
Ga0208303_102595153300025543AqueousMIKECKNCKRKEDHEGQFDCEHWVEDQEAVILCDDCF
Ga0208303_103790963300025543AqueousMIKECKNCKRKEDYEGQFDCEDWNEDQAVILCDDCFFNDLFNEKKDE
Ga0208149_100713043300025610AqueousMIRKCGNCKREEDYENQFDCEDWSEDQIVILCDDCFFNDLYKKDDSSRKFLR
Ga0208160_117540533300025647AqueousRRIMIKECKNCKRKEDHEDQFDCEDWSEDQVVILCDDCFFNDLYKTRKKDE
Ga0208898_108619643300025671AqueousMIRKCDNCKRKEDYEGQFDCEHWVEDQVVILCDDCFFNDLFNKGESNG
Ga0208898_109111013300025671AqueousKECKNCKRKEDYEGQFDCEHWVEDQVVILCDDCFFNDLFNEKKDE
Ga0208898_112044313300025671AqueousMIKKCGNCKREEDHEGQFDCEDWNEDQAVILCDDCFFNNLYKKGESND
Ga0208899_110544113300025759AqueousREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKTGKKDE
Ga0208767_103741413300025769AqueousTPTWSLERRIMIKECKNCKRKEDYEGQFDCEHWVEDQAVILCDDCFFNDLFNEKKDE
Ga0208542_109791133300025818AqueousMIRKCGNCEREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG
Ga0208547_105804813300025828AqueousMIKECKNCKRKEDYEGQFDCEDWNEDQVVILCDDCFFNDLFNKGESNG
Ga0208917_124038133300025840AqueousRRKMIRKCGNCEREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG
Ga0208644_110099053300025889AqueousMIRKCSNCEREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKTGKKDE
Ga0208644_134890523300025889AqueousMIRKCDNCKREEDHEGQFDCEDWNEDQVVILCDDCFFNDLFNKGESNG
Ga0209929_102922853300026187Pond WaterCKNCKRKENYEGQYDCEDWSEDQVVILCDDCFFNDLYNKGESNGKL
Ga0209929_109786013300026187Pond WaterKREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG
Ga0209536_10035888523300027917Marine SedimentMIKECKNCKRKEDYEGQFDCEHWVEDQVVILCDDCFFNDLFNKGESNG
Ga0348335_023814_1687_18333300034374AqueousMIKKCGNCKREEDHEDQFDCEDWNEDQAVILCDDCFFNNLYKKGESND
Ga0348335_087506_907_10263300034374AqueousMIRKCGNCEREEDHEGQFDCEDWNEDQAVILCDDCFFNDL
Ga0348335_101025_2_1273300034374AqueousCEREEDHEGQFDCEDWNEDQAVILCDDCFFNDLYKKGESNG
Ga0348336_091769_953_10573300034375AqueousMIKKCGNCKREEDHEGQFDCEDWNEDQAVILCDDC


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