Metagenome / Metatranscriptome Family F082658

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082658
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	69 residues
Representative Sequence	MDELVAIQAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSYDSSSRSRAKARHQPRP
Number of Associated Samples	106
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.65 %
% of genes near scaffold ends (potentially truncated)	96.46 %
% of genes from short scaffolds (< 2000 bps)	96.46 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.274 % of family members)
Environment Ontology (ENVO)	Unclassified (25.664 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.938 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.05% β-sheet: 0.00% Coil/Unstructured: 58.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF01609	DDE_Tnp_1	7.96
PF05598	DUF772	2.65
PF09339	HTH_IclR	0.88
PF01656	CbiA	0.88
PF02371	Transposase_20	0.88
PF00171	Aldedh	0.88
PF03811	Zn_Tnp_IS1	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	7.96
COG3293	Transposase	Mobilome: prophages, transposons [X]	7.96
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	7.96
COG5421	Transposase	Mobilome: prophages, transposons [X]	7.96
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	7.96
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	7.96
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.88
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.88
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.88
COG3677	Transposase InsA	Mobilome: prophages, transposons [X]	0.88
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	40.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	40.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.94 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	40.71 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	38.94 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	40.71 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	38.94 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	40.71 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	38.94 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.88 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10122803	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	633	Open in IMG/M
3300000754\|JGI11851J11668_1002037	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	820	Open in IMG/M
3300002245\|JGIcombinedJ26739_101367038	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	601	Open in IMG/M
3300002560\|JGI25383J37093_10200546	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	525	Open in IMG/M
3300002561\|JGI25384J37096_10248400	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	519	Open in IMG/M
3300002908\|JGI25382J43887_10137446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1255	Open in IMG/M
3300002912\|JGI25386J43895_10046963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1249	Open in IMG/M
3300003993\|Ga0055468_10051165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1050	Open in IMG/M
3300003993\|Ga0055468_10254348	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005161\|Ga0066807_1037527	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	543	Open in IMG/M
3300005206\|Ga0068995_10069488	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	670	Open in IMG/M
3300005338\|Ga0068868_102203062	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	525	Open in IMG/M
3300005347\|Ga0070668_100302145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1342	Open in IMG/M
3300005363\|Ga0008090_14174173	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300005518\|Ga0070699_100285472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1479	Open in IMG/M
3300005556\|Ga0066707_10431680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	855	Open in IMG/M
3300005598\|Ga0066706_10251177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1377	Open in IMG/M
3300005598\|Ga0066706_11517487	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	504	Open in IMG/M
3300005713\|Ga0066905_102071781	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	529	Open in IMG/M
3300006576\|Ga0074047_11072598	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300006797\|Ga0066659_10522663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	955	Open in IMG/M
3300006844\|Ga0075428_101451071	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	719	Open in IMG/M
3300006918\|Ga0079216_10624810	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	748	Open in IMG/M
3300007255\|Ga0099791_10131582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1163	Open in IMG/M
3300009012\|Ga0066710_102333179	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	777	Open in IMG/M
3300009093\|Ga0105240_11255485	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	783	Open in IMG/M
3300009094\|Ga0111539_10754814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1132	Open in IMG/M
3300009162\|Ga0075423_12972230	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	519	Open in IMG/M
3300009168\|Ga0105104_10137362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1321	Open in IMG/M
3300009444\|Ga0114945_10396035	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	823	Open in IMG/M
3300009553\|Ga0105249_10238442	All Organisms → cellular organisms → Bacteria	1797	Open in IMG/M
3300009626\|Ga0114943_1002716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1169	Open in IMG/M
3300009816\|Ga0105076_1084888	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	601	Open in IMG/M
3300009820\|Ga0105085_1051207	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	750	Open in IMG/M
3300009823\|Ga0105078_1019817	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	772	Open in IMG/M
3300009837\|Ga0105058_1114399	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300010323\|Ga0134086_10032689	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1719	Open in IMG/M
3300010361\|Ga0126378_12372513	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	606	Open in IMG/M
3300010362\|Ga0126377_10501253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1246	Open in IMG/M
3300010366\|Ga0126379_11552351	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300010375\|Ga0105239_13637966	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	501	Open in IMG/M
3300010398\|Ga0126383_11242787	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300010398\|Ga0126383_11942453	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300011417\|Ga0137326_1024256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1299	Open in IMG/M
3300011437\|Ga0137429_1187481	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300012160\|Ga0137349_1039461	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300012189\|Ga0137388_10443588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1203	Open in IMG/M
3300012204\|Ga0137374_10030550	All Organisms → cellular organisms → Bacteria	5898	Open in IMG/M
3300012204\|Ga0137374_10369458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1150	Open in IMG/M
3300012206\|Ga0137380_10037482	All Organisms → cellular organisms → Bacteria	4469	Open in IMG/M
3300012211\|Ga0137377_10334361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1451	Open in IMG/M
3300012212\|Ga0150985_121216762	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300012349\|Ga0137387_10124423	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1820	Open in IMG/M
3300012363\|Ga0137390_10520376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1162	Open in IMG/M
3300012917\|Ga0137395_10223798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1316	Open in IMG/M
3300012922\|Ga0137394_11442591	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	548	Open in IMG/M
3300012957\|Ga0164303_10433745	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	822	Open in IMG/M
3300012989\|Ga0164305_10820761	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	773	Open in IMG/M
3300013306\|Ga0163162_10501985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1343	Open in IMG/M
3300014154\|Ga0134075_10159793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	964	Open in IMG/M
3300014154\|Ga0134075_10345167	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300014301\|Ga0075323_1098778	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300015264\|Ga0137403_10095471	All Organisms → cellular organisms → Bacteria	2986	Open in IMG/M
3300015372\|Ga0132256_100542738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1275	Open in IMG/M
3300016357\|Ga0182032_10759723	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300018051\|Ga0184620_10257834	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	585	Open in IMG/M
3300018074\|Ga0184640_10519355	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	522	Open in IMG/M
3300018075\|Ga0184632_10089032	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300018075\|Ga0184632_10199944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	880	Open in IMG/M
3300019255\|Ga0184643_1437311	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	575	Open in IMG/M
3300019259\|Ga0184646_1399866	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	595	Open in IMG/M
3300020199\|Ga0179592_10129516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1158	Open in IMG/M
3300021086\|Ga0179596_10121682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1212	Open in IMG/M
3300021418\|Ga0193695_1037557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1045	Open in IMG/M
3300022756\|Ga0222622_10245421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1210	Open in IMG/M
3300025324\|Ga0209640_10059220	All Organisms → cellular organisms → Bacteria	3320	Open in IMG/M
3300026118\|Ga0207675_100517395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1189	Open in IMG/M
3300026296\|Ga0209235_1090162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1345	Open in IMG/M
3300026313\|Ga0209761_1119792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1281	Open in IMG/M
3300026332\|Ga0209803_1155674	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	881	Open in IMG/M
3300026358\|Ga0257166_1008869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1215	Open in IMG/M
3300026547\|Ga0209156_10203016	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300027332\|Ga0209861_1030039	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	805	Open in IMG/M
3300027511\|Ga0209843_1021334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1250	Open in IMG/M
3300027643\|Ga0209076_1215262	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	523	Open in IMG/M
3300027655\|Ga0209388_1068918	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1019	Open in IMG/M
3300027809\|Ga0209574_10025682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1375	Open in IMG/M
3300027949\|Ga0209860_1051450	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	546	Open in IMG/M
3300027952\|Ga0209889_1028879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1219	Open in IMG/M
3300027952\|Ga0209889_1059166	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	794	Open in IMG/M
3300027954\|Ga0209859_1017979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1260	Open in IMG/M
(restricted) 3300028043\|Ga0233417_10649462	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	505	Open in IMG/M
3300028592\|Ga0247822_11270150	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	616	Open in IMG/M
3300028710\|Ga0307322_10099297	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	747	Open in IMG/M
3300028722\|Ga0307319_10140605	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	781	Open in IMG/M
3300028793\|Ga0307299_10378793	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	530	Open in IMG/M
3300028807\|Ga0307305_10117741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1227	Open in IMG/M
3300028878\|Ga0307278_10120249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1179	Open in IMG/M
3300030006\|Ga0299907_11264475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	526	Open in IMG/M
3300030620\|Ga0302046_11122767	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	621	Open in IMG/M
3300030903\|Ga0308206_1016138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1199	Open in IMG/M
3300030904\|Ga0308198_1002966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1658	Open in IMG/M
3300031198\|Ga0307500_10305511	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	507	Open in IMG/M
3300031228\|Ga0299914_10402065	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300031668\|Ga0318542_10122609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1272	Open in IMG/M
3300031719\|Ga0306917_11275132	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	569	Open in IMG/M
3300031724\|Ga0318500_10117345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1226	Open in IMG/M
3300031820\|Ga0307473_10477715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	836	Open in IMG/M
3300031910\|Ga0306923_11553970	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300031949\|Ga0214473_10566642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1258	Open in IMG/M
3300032035\|Ga0310911_10809410	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	541	Open in IMG/M
3300032089\|Ga0318525_10640394	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	541	Open in IMG/M
3300033417\|Ga0214471_10700747	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	796	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.50%
Host-Associated	Host-Associated	11.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.45%
Aquatic	Environmental → Aquatic	15.04%
Plants	Host-Associated → Plants	11.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.45%
Sediment	Environmental → Aquatic → Sediment	7.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.08%
Freshwater	Environmental → Aquatic → Freshwater	3.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.54%
Marine	Environmental → Aquatic → Marine	2.65%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.77%
Phylloplane	Host-Associated → Plants → Phylloplane	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.29%
Sand	Environmental → Terrestrial → Soil → Sand	8.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.31%
Loam	Environmental → Terrestrial → Soil → Loam	4.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.65%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.65%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.77%
Lake	Environmental → Aquatic → Freshwater → Lake	0.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.85%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	8.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.65%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.77%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.50%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	8.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.54%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.65%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.65%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.77%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.89%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000754	Amended soil microbial communities from Kansas Great Prairies, USA - acetate Total DNA F2.4TB	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009626	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP1	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300012160	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014301	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027332	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027949	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027954	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)	Environmental	Open in IMG/M
3300028043 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MG	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101228031	3300000597	Forest Soil	VAIQAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSCDSSSRSRAKARHQHRP*
JGI11851J11668_10020372	3300000754	Soil	AALMDELVAIQAAAAMEEGLISPAHLLVDTFPAEQGSQRVTDATTLYKAQKKSSNSSHASHREV*
JGIcombinedJ26739_1013670381	3300002245	Forest Soil	ALMEELGAIQAAAAMDEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSCTSSSGSVSSARSRPXD*
JGI25383J37093_102005461	3300002560	Grasslands Soil	HRIDTELMDELVAIQAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSYDSSSRSRAKARHQPRP*
JGI25384J37096_102484002	3300002561	Grasslands Soil	ELVAIQAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSYDSSSRSRAKARHQPRP*
JGI25382J43887_101374461	3300002908	Grasslands Soil	FVLPETLAQFRHRIDTELMDELVAIQAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSYDSSSRSRAKARHQPRP*
JGI25386J43895_100469632	3300002912	Grasslands Soil	DALVAIQAAAAMEAGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKCFTSSSGSASSARSRPRD*
Ga0055468_100511652	3300003993	Natural And Restored Wetlands	AMQEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKNSCASSRRPRAKAQRRPKH*
Ga0055468_102543481	3300003993	Natural And Restored Wetlands	AAMEEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKTFMSSSESASSVPEPPRP*
Ga0066807_10375271	3300005161	Soil	VLPETLAQFRRRIDQDLMDELVAIQAAAAMEAGLVSPAHLLVDTFPAEQGSQRVTAAMPLYKAQKNSCTSLNASARSARSRPHD*
Ga0068995_100694881	3300005206	Natural And Restored Wetlands	AHLLVDTFPSEQGSQRVTDATTLYKAQKKSYNSSSRSRAKARHQPRPCISKPRR*
Ga0068868_1022030621	3300005338	Miscanthus Rhizosphere	QAAAAMDEGLVSPAHLLVDTFPAEQGSQRVTEATTLYKAQKKSSNSSCPSRSTAPPEQPH
Ga0070668_1003021452	3300005347	Switchgrass Rhizosphere	LAQFRRRIDQDLMDDLVAIQAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKNSCTSSSASASRARSQPRD*
Ga0008090_141741731	3300005363	Tropical Rainforest Soil	QFRHRIDTALMDELVAIQAAAAMAKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKACDSSHRSRAKARHQPRP*
Ga0070699_1002854723	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LAQFRSRLDDALMDELLALQAAAAMDEGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKKSSNSSCPSRSTAPPEQPH*
Ga0066707_104316801	3300005556	Soil	LVAIQAAAAMEAGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKCCTSSSGSASNARARPRA*
Ga0066706_102511773	3300005598	Soil	IQAAAAMEEGLVSPAHLLVDTFPSEQGSQRVTDATTLSKAQKKAYNSSSGSRGSLLSPRPH*
Ga0066706_115174872	3300005598	Soil	MEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSYDSSSRSRAKARHQPRP*
Ga0066905_1020717811	3300005713	Tropical Forest Soil	PAHLLVDTFPSEQGSQRVTDATTLYKAQKKSCDSSSRSRAKARHQHRP*
Ga0074047_110725981	3300006576	Soil	AIPAAEAMEKGLVSPAHLLVDTLPSEQGSQRVTDATTLYKAQKKACASSRRSHAKAPRRPRP*
Ga0066659_105226632	3300006797	Soil	FRHRLDQELLDALVAIQAAAAMEAGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKCCTSSSGSASNARARPRA*
Ga0075428_1014510712	3300006844	Populus Rhizosphere	DDLVAIQAAAAMEEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAKKNSCTSSSVSASSARSRPRD*
Ga0079216_106248102	3300006918	Agricultural Soil	LLAIQAAEAMEKGLASPAHLLVDTFPAEQGSQRVTDATTLYKAQKKSFASSGRSRTKARRRPRP*
Ga0099791_101315822	3300007255	Vadose Zone Soil	AAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKAFDSSSRSHAKAPRRPRP*
Ga0066710_1023331791	3300009012	Grasslands Soil	AAMDEGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKKSSTSLTTSRSSAPSEPPR
Ga0105240_112554852	3300009093	Corn Rhizosphere	LPETLAQFRRRMDQALMDDLVAIQAAAAMEEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKNSCTSSSASASRARSQPRD*
Ga0111539_107548142	3300009094	Populus Rhizosphere	DLVAIQAAAAMEEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAKKNSCTSSSVSASSARSRPRD*
Ga0075423_129722301	3300009162	Populus Rhizosphere	AEAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKAFDSSSRSHAKAPRRPRP*
Ga0105104_101373622	3300009168	Freshwater Sediment	EILAQFRQRIDAELMDERRAIQAAAAMEKGLVSPAPLLVDTFPAEQGSQRVTDATTLYKVQKKSCDASSRSRTKAPRRPRH*
Ga0114945_103960351	3300009444	Thermal Springs	ELLAIQAAAAMEEGLVSPAHLLVDTFPGAQGSQRVTDATTLYKAQKQSATSSRPSRRNAPRKRPR*
Ga0105249_102384421	3300009553	Switchgrass Rhizosphere	TLAQFRRRMDQDLMDDLVAIQAAAAMEKGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKKSCISSSASASSARSRPRD*
Ga0114943_10027162	3300009626	Thermal Springs	GLVSPAHLLVDTFPSEQGSQRVTDATTLYKVQKKSCDSSRQSHTKAPHRPRP*
Ga0105076_10848882	3300009816	Groundwater Sand	RLDQEGLDELVAIQAAAAMAEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKACNSSSGSRGSLLSPRPH*
Ga0105085_10512072	3300009820	Groundwater Sand	TEQQMRRPEKSPRHRSRLDQEGLDELVAIQAAAAMAEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKACNSSSGSRGSLLSPRPH*
Ga0105078_10198172	3300009823	Groundwater Sand	QAAAAMVEGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKKPATQRANHPGSLLAPRPY
Ga0105058_11143991	3300009837	Groundwater Sand	IQAAEAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKAFDSSSRSHAKAPRRPRPCVSKQRH*
Ga0134086_100326892	3300010323	Grasslands Soil	LPETLAQFRHRLDQELLDALVAIQAAAAMEAGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKCCTSSSGSASNARARPRA*
Ga0126378_123725131	3300010361	Tropical Forest Soil	TLAPFRRRMDQDLMDDLVAIQAAAAMEEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKTSCPSSSVSASSARSRPRD*
Ga0126377_105012531	3300010362	Tropical Forest Soil	AMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSCDSSSRSRAKARHQHRP*
Ga0126379_115523511	3300010366	Tropical Forest Soil	GLVSPAHLLVDTFPSEPGSQRVTDATTLYQAQKKACDASSRSRAKARHQHRP*
Ga0105239_136379662	3300010375	Corn Rhizosphere	AAAMEAGLVSPAHLVVDTFPCEQGSQRVTDGTTLYKAQKKSCDSSSRSRAKARHQRRP*
Ga0126383_112427872	3300010398	Tropical Forest Soil	DTELLDELVAIQAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSCDSSSRSRAKARHQHRP*
Ga0126383_119424532	3300010398	Tropical Forest Soil	AKGLVSPAHLLVDTFPSEPGSQRVTDATTLYQAQKKACDASSRSRAQARHQHRP*
Ga0137326_10242561	3300011417	Soil	KLLAIQAAEAMEKALVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKACASSRRSHAKAPRRPRP*
Ga0137429_11874812	3300011437	Soil	IQAAEAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKACASSRRSHAKAPRRPRP*
Ga0137349_10394611	3300012160	Soil	LGARRAAAAMGAGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKNSCTSSSGSVRSARSRPPD*
Ga0137388_104435881	3300012189	Vadose Zone Soil	LAQFRSRLDQEVLDELVAIQAAAAMAEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKACNSSSGSRGSLLSPRPH*
Ga0137374_100305501	3300012204	Vadose Zone Soil	ETLVQFRRRIDQDLLDDLGAIQAAAAMQEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSCTSSSGSVSSARSRPPD*
Ga0137374_103694582	3300012204	Vadose Zone Soil	QAAAAMEAGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKNSCTSSNASARSARSRPRD
Ga0137380_100374823	3300012206	Vadose Zone Soil	MDELVAIQAAAAMEQGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKNSFDSSRR*
Ga0137377_103343611	3300012211	Vadose Zone Soil	PETLAQFRSRLDQELMEALVAIQAAAAMEEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKAYNSSSGSRGSLLSPRPH*
Ga0150985_1212167621	3300012212	Avena Fatua Rhizosphere	ELMDELVAIQAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSCDSSSRSRAKARHQHRP*
Ga0137387_101244232	3300012349	Vadose Zone Soil	MDELVAIQAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSYDSSSRSRAKARHQPRP*
Ga0137390_105203762	3300012363	Vadose Zone Soil	ELVAIQAAAAMAEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKACNSSSGSRGSLLSPRPH*
Ga0137395_102237981	3300012917	Vadose Zone Soil	LVAIQAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSYDSSSRSRAKARHQPRP*
Ga0137394_114425911	3300012922	Vadose Zone Soil	AHFVLPETLAQFRRRIDQDLMDDLVAIQAAAAMEAGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKFCTSSSASASSARSRPRD*
Ga0164303_104337452	3300012957	Soil	CRMDQDYLDDLVATQAAPAMEKGPASPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSCISSSASASSARSRPRD*
Ga0164305_108207611	3300012989	Soil	IDTELMDELVAIQAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSCISSSASASSARSRPRD*
Ga0163162_105019853	3300013306	Switchgrass Rhizosphere	FRRRMDQALMDDLVAIQAAAAMEEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAKKNSCTSSSVSASSARSRPRD*
Ga0134075_101597932	3300014154	Grasslands Soil	AAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSYDSSSRSRAKARHQPRP*
Ga0134075_103451672	3300014154	Grasslands Soil	DELLALQAAAAMDEGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKKSSNSSCPSRSTAPPEQPH*
Ga0075323_10987781	3300014301	Natural And Restored Wetlands	QRIDPALMDELLAIQAAAAMQAGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKNSYDSSWRSHTKARRRPRP*
Ga0137403_100954717	3300015264	Vadose Zone Soil	PEMLTQFRSRIDEALMDDLLAIQAAAAMEEGLVSPAHLVIDTFPAEQGSQRVTDAATLYKAQQKSSSSSTPSRRKAPRQRPR*
Ga0132256_1005427382	3300015372	Arabidopsis Rhizosphere	LPETLAQFRHRIDTELMDELVAIQAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSCDSSSRSRAKARHQRRP*
Ga0182032_107597231	3300016357	Soil	GLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKNSFDSSRRLRAKAPRRPRPCVSKRRS
Ga0184620_102578341	3300018051	Groundwater Sediment	ETLAQFRHRLDAELMDELVAIQAAAAMEQGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKKSFDSSRRLHAKAPRRPSPCVSKRRS
Ga0184640_105193551	3300018074	Groundwater Sediment	MDTLVAIQAAAAMEAGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKNFCTSSNMSARSVRSQQRS
Ga0184632_100890324	3300018075	Groundwater Sediment	IDQDLMDTLVAIQAAAAMDAGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKNSCTSWNASARSARSRARV
Ga0184632_101999441	3300018075	Groundwater Sediment	QFRSRIDEALMDELGAIQAAAAMDEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSCTSSSGSVSSARSRPPD
Ga0184643_14373111	3300019255	Groundwater Sediment	QFRSRLDQALMDELVAIQAAAAMDEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKCCASSSVSPVRGPHLPRP
Ga0184646_13998662	3300019259	Groundwater Sediment	DATLMDELLALQAAAAVDAGLVSPAHLVVDTFPSEQGSQRVTDTATLYKAKKKSSRSSPTSPTSARPRARR
Ga0179592_101295162	3300020199	Vadose Zone Soil	GLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSYDSSSRSRAKARHQPRP
Ga0179596_101216821	3300021086	Vadose Zone Soil	HLLVDTFPSEQGSQRVTDATTLYKAQKKSYDSSSRSRAKARHQPRP
Ga0193695_10375571	3300021418	Soil	ALMEELGAIQAAAAMDEGLVSPAHLLVDTFPSEQGSQRVTDAATLYKAQKKSCTSSSGSVSSARSRPPD
Ga0222622_102454211	3300022756	Groundwater Sediment	HFVLPETLAQFRSRLDQELMEALVAIQAAAAMEEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKAYNSSSGSRGSLLSPRPH
Ga0209640_100592205	3300025324	Soil	IQAAAAMDEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSCTSSRGSVRSARSRPP
Ga0207675_1005173951	3300026118	Switchgrass Rhizosphere	QAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSCDSSSRSRAKARHQRRP
Ga0209235_10901621	3300026296	Grasslands Soil	HRIDTELMDELVAIQAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSYDSSSRSRAKARHQPRP
Ga0209761_11197922	3300026313	Grasslands Soil	RHRIDTELMDELVAIQAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSYDSSSRSRAKARHQPRP
Ga0209803_11556742	3300026332	Soil	AHFVLPETLAQFRHRIDTELMDELVAIQAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSYDSSSRSRAKARHQPRP
Ga0257166_10088692	3300026358	Soil	RLDAELMDELVAIQAAAAMEQGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKNSFDSSRRLRAKAPRRPRPCVSKRRS
Ga0209156_102030161	3300026547	Soil	LQAAAAMDEGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKKSSNSSCPSRSTAPPGQP
Ga0209861_10300391	3300027332	Groundwater Sand	QFRRRIDQDLMDALVAIQAAAAMEAGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKNSYTSSNASARSARSRPRA
Ga0209843_10213342	3300027511	Groundwater Sand	MDELVAIQAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSYDSSSRSRAKARHQPRP
Ga0209076_12152621	3300027643	Vadose Zone Soil	HRLDAELMDELVAIQAAAAMEQGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKNSFDSSRR
Ga0209388_10689182	3300027655	Vadose Zone Soil	MDELVAIQAAAAMEQGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKKSFDSSRRLRAKAPRRPRP
Ga0209574_100256821	3300027809	Agave	MDELIAIQAAAAMDEGLVSPAPLLVDTFPSEQGSQRVTDATTLYKAQKKPSNSSNASHSNVLPAPRR
Ga0209860_10514502	3300027949	Groundwater Sand	MDELVAIQAAAAMDEGLVSPAHLLVDTFPTEQGSQRVTDATTLYKAQKKPSSLSRTSRSSAPPAPQS
Ga0209889_10288791	3300027952	Groundwater Sand	DQEGLDELVAIQAAAAMAEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKACNSSSGSRGSLLSPRPH
Ga0209889_10591662	3300027952	Groundwater Sand	ELLAIQAAAAMDEGLVSPAHLLVDTFPAEQGSQRVSDASTLYNAQKKSSSSSRASRRNAPRKRRR
Ga0209859_10179791	3300027954	Groundwater Sand	LDEALIDELLAIQAAAAMDEGLVSPAHLLVDTFPAEQGSQRVSDASTLYNAQKKSSSSSRASRRNAPRKRRR
(restricted) Ga0233417_106494622	3300028043	Sediment	FRQRIDTALMDELVAIQAAVAMEQGIVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKNSCDSSSRSRAKARRRHRP
Ga0247822_112701502	3300028592	Soil	LVAIQAAAAMEEGLVSPAHLLVDTFPSEQGSQRVPDATTLYKAQKKSCTSSSTSVSSARSRPRD
Ga0307322_100992971	3300028710	Soil	QFRSRLDQELMEALVAIQAAAAMEEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKAYNSSSGSRGSLLSPRPH
Ga0307319_101406052	3300028722	Soil	ETLAQFRGRIDQDLMDTLVAIQAAAAMDAGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKNSSTSWNASASSVRFQARA
Ga0307299_103787931	3300028793	Soil	TLVAIQAAAAMEAQLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKNSCTSWNASARSARSRARV
Ga0307305_101177411	3300028807	Soil	DRIDQDLMDTLVAIQAAAAMEAQLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKNSCTSWNASARSARSRARV
Ga0307278_101202491	3300028878	Soil	ELMEALVAIQAAAAMEEGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKAYNSSSGSRGSLLSPRPH
Ga0299907_112644752	3300030006	Soil	TLCEFRSRIDEALMDELLAIQAAAAMDEGLVSPAHLVVATFPCEQGSQRVTDATTLYKAQKKSSSSSRALRRRARSRPQS
Ga0302046_111227671	3300030620	Soil	QFRHRIDAELMDALLAIQAAAAMQEGLVSPAPLLVDPFPAEQGSQRVTDATTLYKAQKKSCDASRRSPAKARRRPRP
Ga0308206_10161381	3300030903	Soil	ELMEALVAIQAAAAMEEGLVSPAHLLVDTVPSEQGSQRVTDATTLSKAQKKAYNSSSGSRGSLLSPRPH
Ga0308198_10029661	3300030904	Soil	IDQDLMDTLVAIQAAAAMEAQLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKNSCTSWNASARSARSRARV
Ga0307500_103055112	3300031198	Soil	LAQFRRRLDQDLMDDLVAIQAAAAMEEGLVSPAHLLVDPFPAEQGSQRVTDATTLYKAQKKACNSSSGSPGSALSPPPH
Ga0299914_104020653	3300031228	Soil	LVAIQCAAAMEDGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKPFISSRASASSAPELPRP
Ga0318542_101226093	3300031668	Soil	VLPETLAQFRHRIDTELLDELVAIQAAAAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSCDSSSRSRAKARHQHRP
Ga0306917_112751321	3300031719	Soil	AIQAAAAMEQGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKNSFDSSRRLRAKAPRRPRPCVSKRRS
Ga0318500_101173452	3300031724	Soil	DQELLDALVAIQAAAAMEAGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKCCTSSSGSASSARSRPRD
Ga0307473_104777151	3300031820	Hardwood Forest Soil	AAMEKGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKSCDSSSRSRAKARPQHRP
Ga0306923_115539701	3300031910	Soil	QFRHRLDAELMDELVAIQAAAAMEQGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKNSFDSSRRLRAKAPRRPRPCVSKRRS
Ga0214473_105666422	3300031949	Soil	VLPETLAQFRQRIDQDVMDELVALQAAAAMEAGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKNSCTSLHGSARSARSRPHV
Ga0310911_108094101	3300032035	Soil	QGLVSPAHLLVDTFPAEQGSQRVTDATTLYKAQKNSFDSSRRLRAKAPRRPRPCVSKRRS
Ga0318525_106403942	3300032089	Soil	HRLDQELLDALVAIQAAAAMEAGLVSPAHLLVDTFPSEQGSQRVTDATTLYKAQKKCCTSSSGSASSARSRPRD
Ga0214471_107007471	3300033417	Soil	GLVSPAHLLVDTFPSEQGSQRVTDATTLYKVQKKSCDSSRRSRTKQQFPASRVLCPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters