Metagenome / Metatranscriptome Family F082657

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082657
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	118 residues
Representative Sequence	MGRRGLPVSVAALAVCAALGLLGPSAGSASWDQVLVKVVTIHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEKNVDRWGNLPTLGPFAVVNPEGQGRRFRRFSWGY
Number of Associated Samples	93
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	56.25 %
% of genes near scaffold ends (potentially truncated)	98.23 %
% of genes from short scaffolds (< 2000 bps)	94.69 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.115 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (38.053 % of family members)
Environment Ontology (ENVO)	Unclassified (31.858 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.637 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 15.86% β-sheet: 20.00% Coil/Unstructured: 64.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00990	GGDEF	76.99
PF00106	adh_short	0.88
PF05345	He_PIG	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	84.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.31 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	84.07 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	46.90 %
Parvularculales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales	0.88 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	46.02 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Parvularculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae	0.88 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	46.02 %
Parvularcula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula	0.88 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	46.02 %
Parvularcula bermudensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula → Parvularcula bermudensis	0.88 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	46.02 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.88 %
Parvularcula bermudensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula → Parvularcula bermudensis	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	46.02 %
Pseudonocardia sp. P2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. P2	0.88 %
Parvularcula bermudensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula → Parvularcula bermudensis	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Unclassified	root	N/A	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459013\|GO6OHWN02G7KMT	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300000880\|AL20A1W_1153625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711	Open in IMG/M
3300000880\|AL20A1W_1394216	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300001333\|A21PFW6_1002775	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300001535\|A3PFW1_10089744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula → Parvularcula bermudensis	862	Open in IMG/M
3300001536\|A1565W1_10895945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	594	Open in IMG/M
3300001538\|A10PFW1_12232648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300004156\|Ga0062589_101715848	All Organisms → cellular organisms → Bacteria → Proteobacteria	627	Open in IMG/M
3300005181\|Ga0066678_10062130	All Organisms → cellular organisms → Bacteria	2161	Open in IMG/M
3300005186\|Ga0066676_10253054	All Organisms → cellular organisms → Bacteria → Proteobacteria	1151	Open in IMG/M
3300005330\|Ga0070690_101093891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	632	Open in IMG/M
3300005331\|Ga0070670_102068215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300005335\|Ga0070666_10642169	All Organisms → cellular organisms → Bacteria → Proteobacteria	776	Open in IMG/M
3300005343\|Ga0070687_101036624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300005456\|Ga0070678_101302982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	676	Open in IMG/M
3300005518\|Ga0070699_101226722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	688	Open in IMG/M
3300005518\|Ga0070699_101947596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300005526\|Ga0073909_10199808	All Organisms → cellular organisms → Bacteria → Proteobacteria	863	Open in IMG/M
3300005535\|Ga0070684_102264448	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300005547\|Ga0070693_101542105	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005561\|Ga0066699_10180999	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300005568\|Ga0066703_10164651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1336	Open in IMG/M
3300006577\|Ga0074050_11465799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. P2	537	Open in IMG/M
3300009101\|Ga0105247_10838486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	705	Open in IMG/M
3300009137\|Ga0066709_102103028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300010304\|Ga0134088_10310693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	762	Open in IMG/M
3300012001\|Ga0120167_1082341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	670	Open in IMG/M
3300012011\|Ga0120152_1020934	All Organisms → cellular organisms → Bacteria	2465	Open in IMG/M
3300012096\|Ga0137389_10866258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	775	Open in IMG/M
3300012189\|Ga0137388_12026712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300012201\|Ga0137365_11004315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300012208\|Ga0137376_10258372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1511	Open in IMG/M
3300012210\|Ga0137378_10533036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1082	Open in IMG/M
3300012210\|Ga0137378_11093333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	712	Open in IMG/M
3300012211\|Ga0137377_10190084	All Organisms → cellular organisms → Bacteria	1971	Open in IMG/M
3300012211\|Ga0137377_10282772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1592	Open in IMG/M
3300012211\|Ga0137377_10768433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	897	Open in IMG/M
3300012211\|Ga0137377_11087216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300012285\|Ga0137370_10519201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	730	Open in IMG/M
3300012349\|Ga0137387_10263668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1243	Open in IMG/M
3300012351\|Ga0137386_10646203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	761	Open in IMG/M
3300012356\|Ga0137371_10363477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1124	Open in IMG/M
3300012685\|Ga0137397_10492459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	913	Open in IMG/M
3300012907\|Ga0157283_10061333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	898	Open in IMG/M
3300012910\|Ga0157308_10088103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	891	Open in IMG/M
3300012922\|Ga0137394_11299680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300012927\|Ga0137416_10897822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300012930\|Ga0137407_12028039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300012951\|Ga0164300_10341444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	800	Open in IMG/M
3300012960\|Ga0164301_10087315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1747	Open in IMG/M
3300012960\|Ga0164301_10804916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300012961\|Ga0164302_10835781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300012972\|Ga0134077_10360394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	621	Open in IMG/M
3300012975\|Ga0134110_10613482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300012976\|Ga0134076_10505137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300012985\|Ga0164308_11690875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	587	Open in IMG/M
3300012989\|Ga0164305_10825249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	772	Open in IMG/M
3300012989\|Ga0164305_10942528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300013294\|Ga0120150_1019887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1374	Open in IMG/M
3300013294\|Ga0120150_1103887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300013296\|Ga0157374_10782628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	969	Open in IMG/M
3300013772\|Ga0120158_10495118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300014056\|Ga0120125_1070440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	789	Open in IMG/M
3300014058\|Ga0120149_1089623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300014827\|Ga0120171_1069254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	983	Open in IMG/M
3300015077\|Ga0173483_10130735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1085	Open in IMG/M
3300015245\|Ga0137409_10363580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1259	Open in IMG/M
3300018027\|Ga0184605_10426734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300018061\|Ga0184619_10104685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1273	Open in IMG/M
3300018061\|Ga0184619_10468100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300018071\|Ga0184618_10155976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	935	Open in IMG/M
3300018431\|Ga0066655_10128116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1470	Open in IMG/M
3300019255\|Ga0184643_1322104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	672	Open in IMG/M
3300019255\|Ga0184643_1419599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300019868\|Ga0193720_1056171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300019873\|Ga0193700_1059429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	587	Open in IMG/M
3300020001\|Ga0193731_1081946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	840	Open in IMG/M
3300020006\|Ga0193735_1169495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300021344\|Ga0193719_10038099	All Organisms → cellular organisms → Bacteria	2081	Open in IMG/M
3300021344\|Ga0193719_10369404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300021418\|Ga0193695_1066717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	782	Open in IMG/M
3300021510\|Ga0222621_1023368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1251	Open in IMG/M
3300025934\|Ga0207686_11316898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300025938\|Ga0207704_10191569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1488	Open in IMG/M
3300026537\|Ga0209157_1289521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300027846\|Ga0209180_10152183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1333	Open in IMG/M
3300028715\|Ga0307313_10031027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1508	Open in IMG/M
3300028715\|Ga0307313_10148433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300028719\|Ga0307301_10193319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	660	Open in IMG/M
3300028720\|Ga0307317_10056769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1262	Open in IMG/M
3300028720\|Ga0307317_10164573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	746	Open in IMG/M
3300028754\|Ga0307297_10315475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300028778\|Ga0307288_10027958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1848	Open in IMG/M
3300028778\|Ga0307288_10320898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300028791\|Ga0307290_10042744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1626	Open in IMG/M
3300028793\|Ga0307299_10059803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1408	Open in IMG/M
3300028796\|Ga0307287_10238810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300028803\|Ga0307281_10424388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300028807\|Ga0307305_10050660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1913	Open in IMG/M
3300028811\|Ga0307292_10241173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300028819\|Ga0307296_10088737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1652	Open in IMG/M
3300028824\|Ga0307310_10042779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1866	Open in IMG/M
3300028824\|Ga0307310_10365424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711	Open in IMG/M
3300028828\|Ga0307312_10071886	All Organisms → cellular organisms → Bacteria	2100	Open in IMG/M
3300028828\|Ga0307312_10173597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1376	Open in IMG/M
3300028828\|Ga0307312_10198202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1288	Open in IMG/M
3300028828\|Ga0307312_10665421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300028880\|Ga0307300_10025084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1594	Open in IMG/M
3300028884\|Ga0307308_10040458	All Organisms → cellular organisms → Bacteria	2183	Open in IMG/M
3300028884\|Ga0307308_10292710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	780	Open in IMG/M
3300028885\|Ga0307304_10391396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300031200\|Ga0307496_10034021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	803	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.81%
Host-Associated	Host-Associated	6.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.73%
Aquatic	Environmental → Aquatic	7.08%
Plants	Host-Associated → Plants	6.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.73%
Sediment	Environmental → Aquatic → Sediment	4.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.42%
Freshwater	Environmental → Aquatic → Freshwater	2.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.42%
Loam	Environmental → Terrestrial → Soil → Loam	5.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	61.06%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	12.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	38.05%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	12.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.54%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300001333	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300012001	Permafrost microbial communities from Nunavut, Canada - A24_80cm_12M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014827	Permafrost microbial communities from Nunavut, Canada - A3_80cm_18M	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N57_05366600	2170459013	Grass Soil	EIILRMGRRGLPVYVAALAVCAGLGLLGPSAGSASWDQVLVKVVTIHYKTHDGYRRAAYVVLPDWYGSGNNPPLPLIISPHGRGVSAEKNVDRWGNLPTLGPFAVVNPEGQGRRFRRFSWGYXGQIDDLARMPEIVRRAIPWLRIESEAHLCVRHEQWAARRRCCSR
AL20A1W_11536252	3300000880	Permafrost	GCGIILRMGRRGLPVSLAVLAVCTGLGLLGPSAGSASWDQVLVKVVTIHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPTLGPFAVVNPEGQGRRFRRFSWGYAGQIEDLARIPTIIRRAXXXXXXXXAWAARRLCCSPHATRSSSPARPRSTR*
AL20A1W_13942162	3300000880	Permafrost	MGRRGLPVSFAVFAACAALGLLGPSAGKASWDLVQVKVVTIHYRTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPLLGPLAVVNPEGQGRKFRRFSWGYAGQIDDLARMPQL
A21PFW6_10027751	3300001333	Permafrost	MGRRGLPVSFAVFAACAALGLLGPSAGKASWDLVQVKVVTIHYRTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPLL
A3PFW1_100897441	3300001535	Permafrost	ALGLLGPSAGKASWDLVQVKVVTIHYRTHDGYPRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPMLGPFAVVNPEGQGRKFRRFSWGYADSGNATI*
A1565W1_108959451	3300001536	Permafrost	MGRRGLPVFVAALVACALLGLLGPSAGTASWDQVLVKVVTIHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPTLGPFAVVNPEGQGRRFRRFSWGYAGQIEDLARIPTIIRRAIPWLRIEPK
A10PFW1_122326481	3300001538	Permafrost	QEPRRHGDGEAEVPQPRGCRRRSGTSLGISLSGQAAVPGGCGIILRMGRRGLPVCVAMLAVCAGLGLLGPSAGSASWDQVLVKVVTIHYKTHDGHRRAAYVVLPDWYSPGNNPTLPLIISPHGRGVSAEENVDRWGNLPTLGPFAVVNPEGQGRRFRRFSWGYAGQIEDLARMPTIIRRAIPWLRIEPK
Ga0062589_1017158481	3300004156	Soil	MGRRGLPVYVAALAVCAGLGLLGPSAGSASWEQVLVKVVTLHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEKN
Ga0066678_100621301	3300005181	Soil	MGRRGLPVTLAALAVSGALGVLGPSSANASWDQVHVRVVTFHYATHGGHRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPSVGPFAVVNPEGQGRRFGQFSWGYPGQIADLARMPQLVSRNIPWLRIEPRRVYAFGTSMGGQET
Ga0066676_102530542	3300005186	Soil	MGRRGLPVSLIAFVACAALGLLGPSAGRASWDQIQVKVVTIHYKTHDGYRRAAFVVLPNWYGPGDNPPLPLIISPHGRGVSAEENVDRWGS
Ga0070690_1010938911	3300005330	Switchgrass Rhizosphere	MGRRGLPVSLAVLAVCAGLVLLGPTGGRASWDQVEVKVVTIHYKTHDGYRRAAYVVVPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPNVGRLRSSILRDKAAGSDASPGA
Ga0070670_1020682151	3300005331	Switchgrass Rhizosphere	MGRRGLPVSLAVLAVCAGLVLLGPAGGRASWDQVEVKVVTIHYKTHDGYRRAAYVVVPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPNVGPFAVVNPEGQGRRFRRFSW
Ga0070666_106421691	3300005335	Switchgrass Rhizosphere	MGRRGLPVSLAVLAVCAGLVLLGPTGGRASWGQVEVKVVTIHYKTHDGYRRAAYVVVPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPN
Ga0070687_1010366241	3300005343	Switchgrass Rhizosphere	MGRRGLPVSLAVLAVCAGLVLLGPTGGRASWDQVEVKVVTIHYKTHDGYRRAAYVVVPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPNDGPFAVVNPEGQGRRFRRFSWGYPGQIEDLARMPEIVRRAIPWLRLAPKRIYAFGTSMGGQE
Ga0070678_1013029822	3300005456	Miscanthus Rhizosphere	MGRRGLPVSLAVLAVCAGLVLLGPTGGRASWDQVEVKVVTIHYKTQDGYRRAAYVVVPDWYGPGNNPPLPLIISPHGRGVSAEVNVDRWGNLPNDGPFAVVNPEGQGRRFRRFSWG
Ga0070699_1012267221	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MGRRGLPVYVAALAICAGLGLLGPSAGSASWDQVLVKVVTIHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEKNVDRWGNLPTLGPFAVVNPEGQGRRFRRYSWGYAGQIDDLARMPEIVRRAIPWLRIEPKRIYAFGTSMGGQE
Ga0070699_1019475962	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MIPRMGRRGLPVPLAALLVSALLGVLGSSSANAAWDQVQVRVVTFHYQTHDGHRRAAYVVLPGWYGPANNPPLPLIISPHGRGVSAAANVDRWGNLPLLG
Ga0073909_101998082	3300005526	Surface Soil	MGRRGLPVSLAVLAVCAGLVLLGPTGGRASWSQVEVKVVTIHYKTHDGYRRAAYVVVPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPRLGSFAVVNPEGQG
Ga0070684_1022644482	3300005535	Corn Rhizosphere	MGRRGLPVSLAVLAVCAGLVLLGPTGGRASWDQVEVKVVTIHYKTHDGYRRAAYVVVPDWYGPGNNPPLPLIISPHGRGVSAE
Ga0070693_1015421051	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MGRRGLPVCLAALAVCAGLGLLGPSAGSASWDQVLVKVLTIHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEKNVDRWGNLPTLGPFAVVN
Ga0066699_101809991	3300005561	Soil	MTRRSLIFLLVLSAAIGLFGAGAARASWERVQVQVITIHYTTHDGFRRDAYVVLPEWYGPWSNPPLPLIISPHGRGVSAEENVDRWGDLPALGSFAVVNPEGQGRRLENFSW
Ga0066703_101646511	3300005568	Soil	MGRRGLPVTLAVLAVAAVLGVLGPSSANAFWDQVHVRVVTFHYATHDGHRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVD
Ga0074050_114657991	3300006577	Soil	RPLHGPLPCPTMLARSTLAALAVSAALGVLGPSAANASWDLVQVKVVTFHYTTHDGHRRAAFVVLPDGYGPDNNPPLPLIISPHGRGVSAAENVDRWGNLPNLGPFAVVNPEGQGRKFEHFSWGYPGQIADLARMPQLVRRAIPWLQIEPGRTYAFGTSMGGQETLLLVARHPKLLAG
Ga0105247_108384861	3300009101	Switchgrass Rhizosphere	VLAVCAGLVLLGPTGGRASWDQVEVKVVTIHYKIHDGYRRAAYVVVPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPNDGPFAVVNPEGQGRRFRRFSWGYPGQIEDLARMPEI
Ga0066709_1021030282	3300009137	Grasslands Soil	MGRRGLPVTLAVLAVAAVLGVVGPSSANAFWDQVHVRVVTFHYATHDGHRRAAYVVLPDWYRPGVNPPVPLVISPHGRGVSAEENVDRWGNLPNLGPFVVVNPEGQGRRFGQFSWGYPGQIADLARMPQLVSR
Ga0134088_103106931	3300010304	Grasslands Soil	MGRRGLPVSLIAFVACAALGLLGPSAGRASWDQIQVKVVTIHYKTHDGYRRAAYVVLPNWYGPGDNPPLPLIISPHGRGVSAEENVDRWGSIPLLGPFAVVNPEGQGRRLRGFSWGYAGQIEDLARMPQIVRRAIPWLR
Ga0120167_10823411	3300012001	Permafrost	MGRRGLPVFVAALVACALLGLLGPSAGTASWDQVLVKVVTIHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPTLGPFAVVNPEGQGRRFRRFSWGYAGQIEDLARIPTIIRRAIPWLRIEPKRIY
Ga0120152_10209343	3300012011	Permafrost	MGRRGLPVSFAVFAACVALGLLGPSAGKASWDLVQVKVVTIHYRTHDGYPRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPMLGPFAVVNPEGQGRKFRRFSWGYADSGNATI*
Ga0137389_108662582	3300012096	Vadose Zone Soil	MGRRGLPVALAILAVSVALGALGPSAASASWDRVQVRVVTFHYKTHDGDHRAAYVVLPDWYGPGANPPVPLIISPHGRGVSAEENVDRWGNLPKLGPFAVVNP
Ga0137388_120267121	3300012189	Vadose Zone Soil	MGRRGLPVTLTTLAVAAVLGVLGPSSANASWDQVHVRVVTFHYVTHDGHRRAAHVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPSLGPFAVVNPEGQGRRFEQFSWGYPGQIADLARMPQLVRRNIPWLQIERGRIYAFG
Ga0137365_110043152	3300012201	Vadose Zone Soil	MGRRGLPVSLIAFVACAALGLLGPSAGRASWDQIQVKVVTIHYKTHDGYRRAAYVVLPNWYGPGDNPPLPLIISPHGRGVSAEENVDRWGNIPLLGPFAVVNPEGQGRRLRRFSWGYAGQ
Ga0137376_102583722	3300012208	Vadose Zone Soil	MGRRGLPVTLAALAVSGALGVLGPSSANASWDQVHVRVVTFHYATHGGHRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPSVGPFAVVNPEGQGRRFGQFSWGYPGQIADLARMPQ
Ga0137378_105330362	3300012210	Vadose Zone Soil	MGRRGLPVVLAALTVCAALWALGPTSAKASWDQVQVKVVTFHYRTHAGHRRAALVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNL
Ga0137378_110933331	3300012210	Vadose Zone Soil	MGRRGLPVTLAALLVSALLGVLGSSSANAAWDQVQVRVVTFHYQTHDGHRRAAYVVLPDWYGPANNPPLPLIISPHGRGVSAEENVDRWGNLPSVGPFAVVNPEGQGRRFEDFSWGYPGQITDLARMPQLVHRNIPWLRIEPRR
Ga0137377_101900843	3300012211	Vadose Zone Soil	VFAACAALGLLGPSAGRASWDQVQVKVVTIHYKTHDGYRRAAYVVLPDWYGPGDNPTLPLIISPHGRGVSAEENVD
Ga0137377_102827721	3300012211	Vadose Zone Soil	MGRRGLPAALAILGVSVALGALGPSAASASWDQAQVRVVTFHYKTRDGHRRAAYVVLPDWYRPGVNPPVPLVISPHGRGVSAEENVDRWGNLPNLGPFA
Ga0137377_107684331	3300012211	Vadose Zone Soil	MGRRGLPITLAALAVSAVLGTFGPSAASASWDQVRVKVVTFDYKTHDGHRRAAYVVLPDWYGPSNNPPLPLVISPHGRGVSAEENVDRWGNLPTLGPFAVVNPQGQGRRFQRFSWGY
Ga0137377_110872162	3300012211	Vadose Zone Soil	MGRRGLPVVLAALTVCAALWALGPTSAKASWDQVQVKVVTFHYRTHAGHRRAALVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPTLGPFAVVNPEGQGRRFERFSWGYS
Ga0137370_105192011	3300012285	Vadose Zone Soil	MGRRGLPVTLAALAVSGALGVLGPSSANASWDQVHVRVVTFHYATHGGHRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPSVGPFAVVNPEGQGRRFGQFSWGYPGQIADLARMPQLVSRNIPWLRIEPRRVYAFGTSMGGQE
Ga0137387_102636681	3300012349	Vadose Zone Soil	MGRRGLPVSLIAFFACAALGLLGPSAGRASWDQIQVKVVTIHYKTHDGYRRAAYVVLPNWYGPGDNPPLPLIISPHGRGVSAEENVDRWGNIPLLGPFAVVNPEGQGRRLRRFSWGYAGQIEDLARMPQIVRRAIPWLRIEPKGIYAFGTSMGG
Ga0137386_106462032	3300012351	Vadose Zone Soil	MGRRGLPVSLIAFVACAALGLLGPSASRASWDQIQVKVVTIHYKTHDGYRRAAYVVLPNWYGPGDNPPLPFIISPHGRGVSAEENVDRWGNIPLLGPLAVVNPEGQGRRLRRFSWGYAGQIEDLARMPQIVRHAIPWLRIEPKGIYAFGTSMGGQ
Ga0137371_103634771	3300012356	Vadose Zone Soil	MGRRGLPVSLIAFVACAALGLLGPSAGRASWDQIQVKVVTIHYKTHDGYRRAAYVVLPNWYGPGDNPPLPFIISPHGRGVSAEENVDRWG
Ga0137397_104924591	3300012685	Vadose Zone Soil	MGRRGLPVTLAVLAVAAVLGVLGPSSANASWDQVHVRVVTFHYATHDGHRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPSVGPFAVVNPEGQGRRFGQFSW
Ga0157283_100613331	3300012907	Soil	MGRRGLPVYVAALAVCAGLGLLGPSAGSASWDQVLVKVVTIHYKTHNGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRG
Ga0157308_100881031	3300012910	Soil	MGRRGLPVYVAALAVCAGLGLLGPSAGSASWDQVLVKVVTIHYKTHDGYRRAAYVVLPGWYGPSNNPPLPLIISPHGRGVSAEKNVDRWGNLPTVGQFAVANPEGQGRR
Ga0137394_112996801	3300012922	Vadose Zone Soil	MGRRGLPVTLAVLGVAAVLGVLGPSSANAFWDQVHVRVVTFHYATHDGHRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWANLPSVGPFAVVNPEGQGRRFGQFSWGYPGQIADLARMPQLVSRNIPWLRIEPRRVYAFGTSMGG
Ga0137416_108978222	3300012927	Vadose Zone Soil	MGRRGLPVILAVLAVAAVLGVLGPSSANAFWDQVHVRVVTFHYATHDGHRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENIDRWGNLPSLGPFAVVNPEGQGRRLEQFSWGYPGQ
Ga0137407_120280392	3300012930	Vadose Zone Soil	MGRRGLPVTLAALLVSALLGVLGSSSANAAWDQVQVRVVTFHYQTHDGHRRAAYVVLPDWYGPANNPPLPLIISPHGRGVSAEENVDRWGNLPTVGPFAVVNPEGQG
Ga0164300_103414442	3300012951	Soil	MGRRGLPVSLAALAACAGLVLLGPSGGRASWNQVEVKVVTIHYKTHDGYRRAAYVVVPDWYGPGNNPLLPLIISPHGRGVSAEENVDRWGNLPQLGPFAVVNPEGQGRRFRRFSWGYAGQIDDLARMPEIVRRAIPWLRLAPKRVYAFGTSMGG
Ga0164301_100873151	3300012960	Soil	VLTACAGLVLLGPSGGRASWNQVEVKVVTIHYKTHDGYRRAAYVVVPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLP
Ga0164301_108049161	3300012960	Soil	MGRRGLPVCVAALAVCAGLGLLGPSAGSASWDQILVKVVTIHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEKNVERWGNLPTLGPFAVVNPEGQGRRFRRYSWGYAGQIDDLARMPEIV
Ga0164302_108357811	3300012961	Soil	MGRRGLPVCVAALAVCAGLGLLGPSPGSASWDQVLVKVVTVHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAERNVDRWGNLPTLGPFAVVNPEGQG
Ga0134077_103603942	3300012972	Grasslands Soil	MGRRGLPVSLIAFVACAALGLLGPSAGRASWDQIQVKVVTIHYKTHDGYRRAAYVVLPNWYGPGDNPPLPLIISPHGRGVSAEENVDRWGSIPLLGPFAVVNPEGQGR
Ga0134110_106134821	3300012975	Grasslands Soil	MGRRGLPVTLAALICAAVWAWAPASSRASWDQVHVKVVTFHYRTHDGHRRAAFVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPSMGPFAVVNPEGQGRRFGQFSWGYPGQIADLARMPQLVSRNI
Ga0134076_105051371	3300012976	Grasslands Soil	MGRRGLPVTIAALAVSAVLGALGPSAARASWDQVRVKVVTFHYKTHDGHRRAAYVVLPDWYGPGNNPPLPLVISPHGRGVSAEENVDRWGNLPTMGPFAVVNPQGQGRRFQRF
Ga0164308_116908751	3300012985	Soil	MGRRGLPVYVAALAVCAGLGLLGPSAGSASWDQVLVKVVTVHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEKNVERWGNLPTLGPFAVVNPEGQ
Ga0164305_108252491	3300012989	Soil	MLGMGRRGLPVSLAVLAACAALGLLGPAAGKAGWNLVQVKVVTIHYTTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAAANVDRWGNLPLLGSFAVVNPEGQGRRFR
Ga0164305_109425282	3300012989	Soil	MGRRGLPVSLAALAACAGLVLLGPSGGRASWNQVEVKVVTIHYKTHDGYRRAAYVVVPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPKLGPFAVVNPEGQGRRFRRLSWGYP
Ga0120150_10198871	3300013294	Permafrost	MGRRGLPVSFAVFAACAALGLLGPSAGKASWDLVQVKVVTIHYRTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPMLGPFAVVNPEGQGRKFRRFSWGY
Ga0120150_11038871	3300013294	Permafrost	VFAACTALGLLGPSAGRASWNQVQVKVVTIHYRTHDGYRRAAYVVLPDWYGPADNPPLPLIISPHGRGVSAEENVDRWGNLPLLGPFAVVNPEGQGRKFRRFSWGYAGQIDDLARMPQLVRRAIPWLRIEQKGIYAFGTSMGGQET
Ga0157374_107826281	3300013296	Miscanthus Rhizosphere	VLAVCAGLVLLGPTGGRASWDQVEVKVVTIHYKTHDGYRRAAYVVVPDWYGPGNNPPLPLIISPHGRGVSAEENVD
Ga0120158_104951181	3300013772	Permafrost	VFAACTALGLLGPSAGRASWNQVQVKVVTIHYKTHDGYRRAAYVVLPDWYGPADNPPLPLIISPHGRGVSA
Ga0120125_10704401	3300014056	Permafrost	VTLDDELALKVELLGPSAGKASWDLVQVKVVTIHYRTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPLLGPFAVVNPEGQGRKFKRFSWGYPG
Ga0120149_10896232	3300014058	Permafrost	MLAVCAGLGLLGPSAGSASWDQVLVKVVTIHYKTHDGHRRAAYVVLPDWYSPGNNPTLPLIISPHGRGVSAEENVDRWGNLPTLGPFA
Ga0120171_10692542	3300014827	Permafrost	MGRRGLPVSFAVFAACVALGLLGPSAGKASWDLVQVKVVTIHYKTHDGHRRAAYVVLPDWYSLGNNPPLPLIISPHGRGVGARANIRRWGDLPARGGFAVINPEGQGRKLTLFSWGDPGE
Ga0173483_101307352	3300015077	Soil	MGRRGLPVYVAALAVCAGLGLLGPSAGSASWDQVLVKVVTIHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAE
Ga0137409_103635802	3300015245	Vadose Zone Soil	MGRRGLPVTLAVLAVAAVLGVLAPSSANAFWDQVHVRVVTFHYATHDGHRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWANLPSVGPFAVVNPEGQ
Ga0184605_104267341	3300018027	Groundwater Sediment	MGRRGLTVTLAALAASAVLGAFGPSAASASWDQVRVKVVTFHYKTHDGHRRAAYVVLPDWYRPGNNPPLPLVISPHGRGVSAEENVDRWGNL
Ga0184619_101046852	3300018061	Groundwater Sediment	MGRRGLPVSLIVFAACAAGGLLGPSAGKASWDLVQVKVVTIHYKTHDGHRRAAYVVLPDWYGPGDNPPLPLIISPHGRGVSAEENVDRWGN
Ga0184619_104681002	3300018061	Groundwater Sediment	MGRRGLPGSVAVLAVCAGIGLLGPSAGSASWDQVLVKVVTIHYKTHDGYRRAAYVVLPNWYGPGNNPPLPLIISPH
Ga0184618_101559761	3300018071	Groundwater Sediment	MGRRGLPVFVAALAACAGLGLLGPSAGSASWNQVLVKEVTIHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPTLGPFAVVNPEGQGRRFRRFSWGYAGQIEDLARMPTIVRRAIPWLRIEPKRIYAFGTSMGGQETL
Ga0066655_101281161	3300018431	Grasslands Soil	MGRRGLPVTLAALAVAAVLGVGASAADASWNQVQVKVVTFHYKTHDGHRRAAYVVLPDWYGPGTNPPVPLIISPHGRGVSGEENVDRWGNLPNLGPFAVVNPEGQGRR
Ga0184643_13221041	3300019255	Groundwater Sediment	MGRRGLPVTIAALAVSAVLGALGPSAASASWEQVRVKVVTFHYKTHDGHRRAAYVVLPDWYGPGNNPPLPLVISPHGRGVSAEENVDRWGNLPTLGPFAVVNPQGQGRRFQRFSWGYPGQIEDLARMPQLVRRALPW
Ga0184643_14195991	3300019255	Groundwater Sediment	MGRRGLPVFVAVLAVCAGLGLLGPSAGNASWDRVLVKVVTIHYKTHDGYRRAAYVVLPDWYGPDNNPPLPLIISPHGRGVSAEENVARWGNLPTLGPFAVVNPEGQGRRFRR
Ga0193720_10561711	3300019868	Soil	MGRRGLPVYLAALAVCAGLGLLGPSAGSASWDQVLVKVVTIHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEKNVDRWG
Ga0193700_10594292	3300019873	Soil	MGRRGLPVYLAALAVCAGLGLLGPSAGNASWDQVLVKVVTIHYRTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEKNVDRWGNLPTLGPFAVVNPEGQGRRFRRFSWGYAGQIEDLARMP
Ga0193731_10819462	3300020001	Soil	MGRRGLTVTLAALAASAVLGAFGPSAASASWDQVRVKVVTFHYKTHDGHRRAAYVVLPDWYRPGNNPPLPLVISPHGRGVSAEENVDRWGNLPTL
Ga0193735_11694952	3300020006	Soil	MGRRGLPVTLAALAVSAVLGALGPSAASASWDQVRVKVVTFHYKTHDGHRRAAYVVLPDWYGPDNNPPLPLIISPHGRGVSAEENVDRWGNLPTLGPFAVVNPQGQ
Ga0210382_101300491	3300021080	Groundwater Sediment	MGRRGLAVTLAALAVSAALGVLGPSAANASWDLVQVRVVTFHYTTHDGHRRAAFVVLPDWYGPDNNPPLPLIIS
Ga0193719_100380991	3300021344	Soil	MGRRGLPVTLAALAVSAVLGALGPSAASASWDQVRVKVVTFHYKTHDGHRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPTLGPFAVVNPQGQGRRFQRFSWGYPGQ
Ga0193719_103694041	3300021344	Soil	MGRRGLPGSVAVLAVCAGMGLLGPSSGSASWDQVLVKVVTIHYKTHDGYRRAAYVVVPDWYGAGNNPPLPLIISPHGRGV
Ga0193695_10667171	3300021418	Soil	MGRRGLAVTLAALAVSAVFGTVGPSAASASWDQVRVKVVTFHYKTHDGHRRAAYVVLPDWYGPGNNPPLPLVISPHGRGVSAEENVD
Ga0222621_10233681	3300021510	Groundwater Sediment	MGRRGLAVTLAALAVSAALGVLGPSAANASWDLVQVRVVTFHYTTHDGHRRAAFVVLPDWYGPDNNPPLPLIISPHGRGVSAEENVDRWGNLPNLGPFAVVNPEGQGRRFEHFSWGYPGQIADLARMLQL
Ga0207686_113168981	3300025934	Miscanthus Rhizosphere	MGRRGLPVSLAVLAVCAGLVLLGPTGGRASWDQVEVKVVTIHYKTHDGYRRAAYVVVPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPNVGP
Ga0207704_101915691	3300025938	Miscanthus Rhizosphere	MGRRGLPVSLAVLAVCAGLVLLGPTGGRASWDQVEVKVVTIHYKTHDGYRRAAYVVVPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPNVGPFAVVNPEGQGRRFRRFSWGYPGQIEDLARMPEIVRRAIPWLRLAPKRIYAFGTSMGGQ
Ga0209157_12895211	3300026537	Soil	MGRRGLPVTLAALAVAAVLGVGASAADASWNQVQVKVVTFHYKTHDGHRRAAYVVLPDWYGPGNNPPLPLVISPHGRGVSAEENVDRWGNLPTLGPFAVVN
Ga0209180_101521832	3300027846	Vadose Zone Soil	MGRRGLPVALAILAVSVALGALGPSAASASWDRVQVRVVTFHYKTHDGDHRAAYVVLPDWYGPGANPPVPLIISPHGRGVSAEENVDRWGNLPKLGPFAVVNPEGQGRRFEHFSWGYPGQIADLARMPQLVRRAIPWLHIEPGRIYAFGTSM
Ga0307313_100310272	3300028715	Soil	MGRRGLPVYLAALAVCAGLGLLGPSAGNASWDQVLVKVVTIHYRTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEKNVDR
Ga0307313_101484331	3300028715	Soil	MGRRGLPVTLAALAVSAVLGALGPSAASASWDQVRVKVVTFHYKTHDGHRRAAYVVLPAWYGPDNNPPLPLIISPHGRGVSAEENVDRW
Ga0307301_101933192	3300028719	Soil	MGRRGLPVYVAALAVCAALGLLGPSAGSASWDQVLVKVVTIHYKTHDGYRRAAYVVVPDWYGAGDNPPLPLIISPHGRGVSAEQNVARWGNLPTLGSFAVVNPEGQGRRFRRFSWGYAGQIEDLARMPQIIRRAIPWLRIEPKRIYAFGTSMGGQE
Ga0307317_100567691	3300028720	Soil	MGRRGLPVFVAVLAVCAGLGLLGPSAGNASWDRVLVKVVTIHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPTLGPFAVVNPEGQGRRFRRFSWGY
Ga0307317_101645731	3300028720	Soil	MGRRGLPVYVAALAVCAALGLLGPSAGSASWDQVLVKVVTIHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSA
Ga0307297_103154751	3300028754	Soil	MGRRGLPVYVVALAVCAGLGLLGPSAGTASWDQVLVKVVTIHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEKNVDRWGNLPTLGPFAVVNPEGQGRRFRRFSWGYAGQIEDLARMPQIVRRAIPWLRIEPKRVYAFGTSMGGQE
Ga0307288_100279581	3300028778	Soil	MGRRGLPVYLAALAVCAGLGLLGPSAGNASWDQVLVKVVTIHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEKNVDRWGNLPTLGPFAVVNPEGQGRR
Ga0307288_103208982	3300028778	Soil	MGRRGLAVTLAALAVSAALGVLGPSAANASWDLVQVRVVTFHYTTHDGHRRAAFVVLPDWYGPDNNPPLPLIISPHGRGVSAEENVDRWGNLPNLGPFAVVNPEGQGRRFEHFSWGYPGQIADLARMPQLVRRAIPWLQIEPGRTYAF
Ga0307290_100427441	3300028791	Soil	MGRRGLPVTLAALAVSAVLGALGPSAASASWDQVRVKVVTFHYKTHDGHRRAAYVVLPDWYGPDNNPPLPLIISPHGRGVSAEENVDRWGNLPTLGPFAVVNPQGQGRRFQRFSWGYPGQIEDLARM
Ga0307299_100598031	3300028793	Soil	MGRRGLPVTLAALAVSAVLGGLGPSAASASWDQVRVKVVTFHYKTHDGHRRAAYVVLPDWYGPDNNPPLPLIISPHGRGVSAEENVDRWGNLPTLGPFAVVNPQGQGRRFQRFSW
Ga0307287_102388102	3300028796	Soil	MGRRGLPGSVAVLAVCAGIGLLGPSSGSASWDQVLVKVVTIHYKTHDGYRRAAYVVVPDWYGAGNNPPLPLIISPHGRGVSAEQN
Ga0307281_104243881	3300028803	Soil	QPKIFSPTRTAVPGGCGIIQRMGRRGLPVSLAVLAVCGGLVLLGPSAGSATWDQVHVKVVTIHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEENVDRWGNLPTLGPFAVVNPEGQGRRFRRFSWGYPGQIADLARMPEIVRRAIPWLRLAPKRIYSF
Ga0307305_100506601	3300028807	Soil	MGRRGLPISVAVLAVCAGIGLLGPSAGSASWDQVLVKVVTIHYKTHDGHRRAAYVVVPDWYGPGNNPPLPLIISPHGRGVSAKQNVARWGNLPTLGPFAVVNPEGQGRRFRRFSWGYAGQIDDLARMPQIIRRAIPWLRIEPKRIYAFGTSMGG
Ga0307292_102411732	3300028811	Soil	MGRRGLPVYLAALAVCAGLGLLGPSAGNASWDQVLVKVVTIHYRTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEKNVDRWGNLPTLGPFAVVNPEGQGRRFRRF
Ga0307296_100887371	3300028819	Soil	MGRRGLPGSVAVLAVCAGIGLLGPSSGSASWDQVLVKVVTIHYKTHDGYRRAAYVVVPDWYGAGNNPPLPLIISPHGRGVSAEQNVARWGNLPTLGSFAVVNPEGQGRRFRRFSWGYAGQIEDLARMPQITRRAIPWLR
Ga0307310_100427793	3300028824	Soil	MGRRGLPVYLAALAVCGGLGLLGPSAGNASWDQVLVKVVTIHYRTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEK
Ga0307310_103654241	3300028824	Soil	MGRRGLPVTIAALAVSAVLGALGPSAASASWEQVRVKVVTFHYKTHDGHRRAAYVVLPDWYGPGNNPPLPLVISPHGRGVSAEENVDRWGNLPTLGPFAVVNPQGQGRRFQRFSWGYPGQIEDLARMPQLVRRALPWLQIAPHRVYAFGTSMGGQETLLLVARHP
Ga0307312_100718861	3300028828	Soil	MGRRGLPVYVAALAVCAGLGLLGPSAGRASWDQVLVKVVTIHYKTHDGYRRAAYVVLPDWYGPSNNPLLPLIISPHGRGVSAEKNVDRWGNLPTLGPFAVVNPEGQGRRF
Ga0307312_101735971	3300028828	Soil	MGRRGLPISVAVLAVCAGIGLLGPSAGSASWDQVLVKVVTIHYKTHDGHRRAAYVVVPDWYGPGNNPPLPLIISPHGRGVSAKQNVARWGNLPTLGPFAVVNPEGQGRRFRRFSWGYAGQIEDLARMPQIIRRAIPWLRIEPKRIYA
Ga0307312_101982021	3300028828	Soil	MGRRGLPVTLAALAVSAVLGALGPSAASASWDQVRVKVVTFHYKTHDGHRRAAYVVLPDWYRPGNNPPLPLIISPHGRGVSAEENVDRWGNLPTLGPFAVVNPQGQGRRFQRFSWGYPGQIEDLARMPQLDRRALP
Ga0307312_106654211	3300028828	Soil	MGRRGLPVSVAALAVCAALGLLGPSAGSASWDQVLVKVVTIHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEKNVDRWGNLPTLGPFAVVNPEGQGRRFRRFSWGY
Ga0307300_100250841	3300028880	Soil	MGRRGLAVTLAALAVSAALGVLGPSAANASWDLVQVRVVTFHYTTHDGHRRAAFVVLPDWYGPDNNPPLPLIISPHGRGVSAEENVDRWGNLPNLGPFAVVNPEGQGRRFEHFSWGYPGQIADLARMPQLVRRAIPWLQIEPGRTYAFGTSMGGQETLLLVARHPKLL
Ga0307308_100404583	3300028884	Soil	MGRRGLPVYLAALAVCAGLGLLGPSAGNASWDQVLVKVVTIQYRTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEKNVDRWGNLPTLGPFAVVNPEGQ
Ga0307308_102927101	3300028884	Soil	MGRRGLPVYVAALAVCAGLGLLGPSAGRASWDQVLVKVVTIHYKTHDGYRRAAYVVLPDWYGPSNNPLLPLIISPHGRGVSAEKNVDRWGNLPTLGPFAVVNPEGQGRRFRRFSWGYAGQIEDLARMPQIVRRAIPWLRIEPKRI
Ga0307304_103913961	3300028885	Soil	MGRRGLPVYVAALAVCAGLGLLGPSAGRASWDQVLVKVVTIHYKTHDGYRRAAYVVLPDWYGPSNNPLLPLIISPHGRGVSAEKNVDRWGNLPTLGPFAVVNPEGQGRRFRRFSLGYAGQ
Ga0307496_100340211	3300031200	Soil	MGRRGLPVYIAALVVCAGLGLLGPSAGSASWDQVLVKVVTIHYKTHDGYRRAAYVVLPDWYGPGNNPPLPLIISPHGRGVSAEKNVDRWGNLPTLGAFAVVNPEGQG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082657

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences