Metagenome / Metatranscriptome Family F082655

Basic Information
Family ID	F082655
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	48 residues
Representative Sequence	MDRGPAGVDDAGPRTPGVRGSRRLLAAGLAAVVVLLGVIAVLAIRL
Number of Associated Samples	108
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.84 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	88.50 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Bacteria (66.372 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.009 % of family members)
Environment Ontology (ENVO)	Unclassified (26.549 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.903 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.54% β-sheet: 0.00% Coil/Unstructured: 59.46%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF04185	Phosphoesterase	21.24
PF11774	Lsr2	10.62
PF03704	BTAD	7.08
PF13460	NAD_binding_10	2.65
PF04672	Methyltransf_19	2.65
PF09992	NAGPA	1.77
PF00903	Glyoxalase	1.77
PF04545	Sigma70_r4	1.77
PF13193	AMP-binding_C	1.77
PF01266	DAO	0.88
PF02146	SIR2	0.88
PF07883	Cupin_2	0.88
PF08241	Methyltransf_11	0.88
PF13560	HTH_31	0.88
PF00535	Glycos_transf_2	0.88
PF01242	PTPS	0.88
PF00196	GerE	0.88
PF00501	AMP-binding	0.88
PF01804	Penicil_amidase	0.88
PF08032	SpoU_sub_bind	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	21.24
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	7.08
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	7.08
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.88
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	0.88
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.37 %
Unclassified	root	N/A	33.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.37 %
Unclassified	root	N/A	33.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.37 %
Unclassified	root	N/A	33.63 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	58.41 %
Unclassified	root	N/A	33.63 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	55.75 %
Unclassified	root	N/A	33.63 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	46.02 %
Unclassified	root	N/A	33.63 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.88 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.63 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	4.42 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	3.54 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.65 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.88 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	0.88 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.88 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.88 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.63 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	4.42 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3.54 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.65 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.88 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.88 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.63 %
Aeromicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium	4.42 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.65 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.88 %
Kineosporia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	0.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.63 %
Aeromicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium	4.42 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.65 %
Microbacterium kyungheense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium kyungheense	0.88 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.88 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.88 %
Kineosporia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	0.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.63 %
Aeromicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium	4.42 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.65 %
Streptomyces sp. NRRL S-444	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NRRL S-444	0.88 %
Microbacterium kyungheense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium kyungheense	0.88 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.88 %
Kineosporia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	0.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10180169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1436	Open in IMG/M
3300005164\|Ga0066815_10124213	Not Available	504	Open in IMG/M
3300005186\|Ga0066676_10289877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1080	Open in IMG/M
3300005330\|Ga0070690_100030165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3368	Open in IMG/M
3300005434\|Ga0070709_10138134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1671	Open in IMG/M
3300005435\|Ga0070714_100499959	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300005438\|Ga0070701_10407882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	863	Open in IMG/M
3300005439\|Ga0070711_102016745	All Organisms → cellular organisms → Bacteria → Terrabacteria group	508	Open in IMG/M
3300005445\|Ga0070708_100127026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2358	Open in IMG/M
3300005451\|Ga0066681_10589590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium	685	Open in IMG/M
3300005536\|Ga0070697_101949654	Not Available	526	Open in IMG/M
3300005545\|Ga0070695_100549393	Not Available	900	Open in IMG/M
3300005555\|Ga0066692_10531712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	746	Open in IMG/M
3300005563\|Ga0068855_101911424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	601	Open in IMG/M
3300005602\|Ga0070762_10677745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	690	Open in IMG/M
3300005610\|Ga0070763_10816250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300006028\|Ga0070717_11132628	Not Available	712	Open in IMG/M
3300006578\|Ga0074059_11740378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	688	Open in IMG/M
3300006804\|Ga0079221_10270813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	978	Open in IMG/M
3300006804\|Ga0079221_11353486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	563	Open in IMG/M
3300006954\|Ga0079219_10972001	Not Available	699	Open in IMG/M
3300009098\|Ga0105245_11444150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium	738	Open in IMG/M
3300009792\|Ga0126374_11226614	Not Available	602	Open in IMG/M
3300010048\|Ga0126373_10651611	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300010396\|Ga0134126_11215204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	837	Open in IMG/M
3300010397\|Ga0134124_12467768	Not Available	562	Open in IMG/M
3300010398\|Ga0126383_12652244	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300010400\|Ga0134122_12684312	Not Available	550	Open in IMG/M
3300010937\|Ga0137776_1303326	Not Available	535	Open in IMG/M
3300011269\|Ga0137392_10986577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	692	Open in IMG/M
3300012356\|Ga0137371_10785306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	726	Open in IMG/M
3300012488\|Ga0157343_1031812	Not Available	535	Open in IMG/M
3300012896\|Ga0157303_10291773	Not Available	517	Open in IMG/M
3300012923\|Ga0137359_10804522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	814	Open in IMG/M
3300012957\|Ga0164303_10121319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1334	Open in IMG/M
3300012957\|Ga0164303_10848496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NRRL S-444	634	Open in IMG/M
3300012958\|Ga0164299_10818946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium	666	Open in IMG/M
3300013102\|Ga0157371_10071896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2449	Open in IMG/M
3300013105\|Ga0157369_11106023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	810	Open in IMG/M
3300013296\|Ga0157374_12096440	Not Available	592	Open in IMG/M
3300013308\|Ga0157375_13111283	Not Available	554	Open in IMG/M
3300014325\|Ga0163163_10143446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2431	Open in IMG/M
3300015373\|Ga0132257_104157680	Not Available	526	Open in IMG/M
3300015374\|Ga0132255_100282801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2382	Open in IMG/M
3300017947\|Ga0187785_10200319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	869	Open in IMG/M
3300017959\|Ga0187779_10255266	Not Available	1111	Open in IMG/M
3300019877\|Ga0193722_1123203	Not Available	595	Open in IMG/M
3300020062\|Ga0193724_1125793	Not Available	504	Open in IMG/M
3300020580\|Ga0210403_10763769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	771	Open in IMG/M
3300020582\|Ga0210395_10146439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1761	Open in IMG/M
3300020583\|Ga0210401_11532246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300021170\|Ga0210400_10745420	Not Available	804	Open in IMG/M
3300021401\|Ga0210393_10974591	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300021403\|Ga0210397_11013006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium	644	Open in IMG/M
3300021404\|Ga0210389_10251090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1383	Open in IMG/M
3300021404\|Ga0210389_10635119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Aeromicrobium	838	Open in IMG/M
3300021406\|Ga0210386_10357432	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300021420\|Ga0210394_10863320	All Organisms → cellular organisms → Bacteria → Terrabacteria group	789	Open in IMG/M
3300021432\|Ga0210384_10043713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4101	Open in IMG/M
3300021479\|Ga0210410_10791573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	833	Open in IMG/M
3300021560\|Ga0126371_12180226	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300024227\|Ga0228598_1044117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	882	Open in IMG/M
3300024279\|Ga0247692_1063346	Not Available	577	Open in IMG/M
3300024288\|Ga0179589_10004772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3577	Open in IMG/M
3300025885\|Ga0207653_10014547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2470	Open in IMG/M
3300025913\|Ga0207695_11499974	Not Available	555	Open in IMG/M
3300025915\|Ga0207693_11484190	Not Available	501	Open in IMG/M
3300025916\|Ga0207663_11722076	Not Available	504	Open in IMG/M
3300025928\|Ga0207700_11614897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	573	Open in IMG/M
3300025934\|Ga0207686_10803111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	754	Open in IMG/M
3300025939\|Ga0207665_11593774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	518	Open in IMG/M
3300025972\|Ga0207668_10363872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1213	Open in IMG/M
3300025981\|Ga0207640_11693513	Not Available	571	Open in IMG/M
3300026088\|Ga0207641_10189513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1889	Open in IMG/M
3300026214\|Ga0209838_1035106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300026310\|Ga0209239_1365067	Not Available	506	Open in IMG/M
3300026547\|Ga0209156_10241880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	842	Open in IMG/M
3300026899\|Ga0209326_1002630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1427	Open in IMG/M
3300027504\|Ga0209114_1107118	Not Available	521	Open in IMG/M
3300027765\|Ga0209073_10225405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	721	Open in IMG/M
3300027783\|Ga0209448_10241903	Not Available	596	Open in IMG/M
3300027889\|Ga0209380_10221610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1111	Open in IMG/M
3300027895\|Ga0209624_10658769	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300028379\|Ga0268266_11669089	Not Available	612	Open in IMG/M
3300028381\|Ga0268264_10966621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	857	Open in IMG/M
3300028906\|Ga0308309_10772335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	835	Open in IMG/M
3300029999\|Ga0311339_11840838	Not Available	524	Open in IMG/M
3300031545\|Ga0318541_10138841	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300031549\|Ga0318571_10220402	Not Available	687	Open in IMG/M
3300031573\|Ga0310915_10063526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2414	Open in IMG/M
3300031744\|Ga0306918_10271657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1299	Open in IMG/M
3300031771\|Ga0318546_10213016	Not Available	1322	Open in IMG/M
3300031782\|Ga0318552_10024194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2726	Open in IMG/M
3300031793\|Ga0318548_10046189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1974	Open in IMG/M
3300031796\|Ga0318576_10623315	Not Available	508	Open in IMG/M
3300031798\|Ga0318523_10256672	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300031805\|Ga0318497_10643890	Not Available	594	Open in IMG/M
3300031893\|Ga0318536_10167165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1119	Open in IMG/M
3300031912\|Ga0306921_11545666	Not Available	723	Open in IMG/M
3300031954\|Ga0306926_11486011	Not Available	782	Open in IMG/M
3300032009\|Ga0318563_10542359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	628	Open in IMG/M
3300032039\|Ga0318559_10416810	Not Available	626	Open in IMG/M
3300032076\|Ga0306924_12273246	Not Available	551	Open in IMG/M
3300032090\|Ga0318518_10355666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	752	Open in IMG/M
3300032261\|Ga0306920_100009141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13213	Open in IMG/M
3300032770\|Ga0335085_10081109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium kyungheense	4257	Open in IMG/M
3300032770\|Ga0335085_11011554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	897	Open in IMG/M
3300032782\|Ga0335082_11565261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	531	Open in IMG/M
3300032805\|Ga0335078_12350899	Not Available	556	Open in IMG/M
3300032892\|Ga0335081_11378735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	789	Open in IMG/M
3300033134\|Ga0335073_10730709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1076	Open in IMG/M
3300033158\|Ga0335077_10202139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2233	Open in IMG/M
3300033158\|Ga0335077_10908534	Not Available	886	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.07%
Host-Associated	Host-Associated	15.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.30%
Plants	Host-Associated → Plants	15.93%
Aquatic	Environmental → Aquatic	1.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.19%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%
Peat	Environmental → Terrestrial → Peat	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.21%
Loam	Environmental → Terrestrial → Soil → Loam	19.47%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.77%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.89%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.39%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.89%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.01%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012488	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610	Host-Associated	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026899	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027504	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082655

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_101801693	3300001686	Soil	MERGPAGGDGAGSRASGARASQRWLVAGTVAAAILLGVIAVLATRLATAS
Ga0066815_101242132	3300005164	Soil	MDRGPAGVDGAGPRPPGVRGSRRLIAVGTAAVVVLLGVIAVLATRLAGAPPAA
Ga0066676_102898772	3300005186	Soil	MDRGPAGVDGAGPRTPGVRGSRRLIAVGTAAVVVLLGVIAVLATRLADA
Ga0070690_1000301654	3300005330	Switchgrass Rhizosphere	MDPGPAGVDGAGPRTPRARGPRRLLVAGTAAVVVLLAVIAVLAIRLADTPPAAKAAAPRPAPTPPSLT
Ga0070709_101381341	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MVRGPAGVDSAGPRLPGVRGSRRLLAAGLAVVVILLGVIAGLAFRL
Ga0070714_1004999591	3300005435	Agricultural Soil	MDRGPAGVDGAGPRLPGVRGSRRLLAAGLAVVVILLGVIA
Ga0070701_104078821	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MDPGPAGVDGAGSRTPRARGPRRLLVAGTAAVVVLLAVIAVLAIRL
Ga0070711_1020167451	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MVRGPDGAGSHTPGVRGSRRLLAGLAAVVVLLVVIAVLATRLADAP
Ga0070708_1001270262	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDPGPAGVDGAGPRTPRTRGPRRLLVAGTAAVVVLLVVIAVLAIRLAGTPPAAK
Ga0066681_105895902	3300005451	Soil	MVRGPDGAGSHTPGVRGSRRLLAGLAGVVVLLVVIAVLATRLADAPPAAN
Ga0070697_1019496541	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDPGPAGVDGAGPRTPRARGPRRLLVAGTAAVVVLLAVIAVLAIRLADTPPAAKA
Ga0070695_1005493932	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MDRGPDGAGSHTPGVRGSRRLLAAGLVAVVVLLVVIAVLATRLADA
Ga0066692_105317122	3300005555	Soil	MDRGSDGAGSHTPGVRGSRRLLAAGLAAVVVLLGVIAVLATRLAGAAPEASAR
Ga0068855_1019114241	3300005563	Corn Rhizosphere	MDRGPDGAGSHTPGVRGSRRLLAAGLVAVVVLLVVIAVLATRLAD
Ga0070762_106777451	3300005602	Soil	MDRGPAGGDGAGPPTPGVRGSRRLLAAGLAVVVVLLVVIAVLATR
Ga0070763_108162501	3300005610	Soil	MDREPGGVDDAGPSTPGVRGSRRLLAAGLAAVVVLLVVIAVLATRLAGAAPAA
Ga0070717_111326282	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDRGPAGVDGAGPRLPGVRGSRRLLAAGLAVVVILLGVIAG
Ga0074059_117403781	3300006578	Soil	MDRGPAGVDGAGPRTPGARGSRRLLVAGTAAVVVLLAVIAVLATRLAGT
Ga0079221_102708132	3300006804	Agricultural Soil	MDPGPAGVDGAGPRTPRARGPRRLLVAGTAAVVVLL
Ga0079221_113534862	3300006804	Agricultural Soil	MDRGPDGAGSHTPGVRGSRRLLAAGLVAVVVLLVVIAVLATRLADT
Ga0079219_109720012	3300006954	Agricultural Soil	MVRGPAGVDSAGPRSPGVRGSRRLLAAGLAVVVILLGVIAGLAFRL
Ga0105245_114441502	3300009098	Miscanthus Rhizosphere	MDRGPDGAGSHTPGVRGSRRLLAAGLVAVVVLLVVIAVLATRLA
Ga0126374_112266141	3300009792	Tropical Forest Soil	MDRGPAGVDDAGPRTPGVRGSRRLLAAGLVAVAVLLGVITVL
Ga0126373_106516111	3300010048	Tropical Forest Soil	MNREPAALDGTGPRVAGVRRSRRLLAAGLAVVLLGVTAGLAIWLSGAAPAASP
Ga0134126_112152042	3300010396	Terrestrial Soil	MDREPAGDDGAGPRPGPGPAGVRGSRRLLAAGAGVLVLLLVVIAVLAT
Ga0134124_124677682	3300010397	Terrestrial Soil	MDPGPAGVDGAGPRPPGARGSRRLLAVGTAALVVLLGVIAVLATRLADAPPAAKAATPRP
Ga0126383_126522441	3300010398	Tropical Forest Soil	MDREPAGAGSRPPGFRGSRRLLVAGLAVVVVLLVAVAVLATLLAGGT
Ga0134122_126843122	3300010400	Terrestrial Soil	MDPGPAGVDGAGPRTPRARGPRRLLVAGTAAVVVLLVVIAVLAIRLA
Ga0137776_13033261	3300010937	Sediment	MDRGPAGGDDVGPRTPGVRGSRRLLAAGLVAVLVLLGVIAVLVTR
Ga0137392_109865772	3300011269	Vadose Zone Soil	MDRGPDGAGSHTPGVRGSRRLLAAGLAAVVVLLVVIAVLATRLADAPPEANAKAA
Ga0137371_107853062	3300012356	Vadose Zone Soil	MDRGSDGAGSHTPGVRGSRRLLAAGLAAVVVLLGVIAVLATRLAGAAPEASARAGTP
Ga0157343_10318122	3300012488	Arabidopsis Rhizosphere	MDPGPAGVDGAGLRTPRARGPRRLLVAGTAAVVVLLAVIAVLAIRLAGTPPAAKAATPRP
Ga0157303_102917731	3300012896	Soil	MDPGPAGVDGAGPRTPGARGSRRLLVAGIAAVVVLLAVIAVLATRLAGTPSAAKAATPRRTP
Ga0137359_108045221	3300012923	Vadose Zone Soil	MDRGPDGVDGAGPRTPGIRGSRRLLTAGLAAVVVLLGVIAVL
Ga0164303_101213191	3300012957	Soil	MDPGPAGVDGAGPRTPGARGPRRLLVAGAAAMVVLLAVIAVLAIRLA
Ga0164303_108484962	3300012957	Soil	MDRGPAGVDGAGPRPSRVRGTRRLIVAGTAVVVVLLVVIA
Ga0164299_108189461	3300012958	Soil	MDRGPDGAGSHTPGVRGSRRLLAAGLVAVVVLLVVIAVLA
Ga0157371_100718961	3300013102	Corn Rhizosphere	MDPGPAGVDGAGPRTPRARGPRRLLVAGTAAVVVLLAVIAVLAIR
Ga0157369_111060232	3300013105	Corn Rhizosphere	MDPGPAGVDGAGPRTPRARGPRRLLVAGTAAVVVLLAVIAVLAIRLAGTPPAAKAATPRPAPTPT
Ga0157374_120964402	3300013296	Miscanthus Rhizosphere	MDPGPAGVDGAGPRTPRARGPRRLLVAGTAAVVVLLAVIAVL
Ga0157375_131112831	3300013308	Miscanthus Rhizosphere	MDRGPAGVDGAGPRTPGVRGSRRLIAIGTADVVVLLGVIAVLATRL
Ga0163163_101434462	3300014325	Switchgrass Rhizosphere	MDPGPAGVDGAGPRTPRARGPRRLLVAGTAAVVVLLAVIAVLAIRL
Ga0132257_1041576801	3300015373	Arabidopsis Rhizosphere	MARGPAGVDGAGPRTPAVRGSRRLIAVGTAAAVVLLGVIAVLAARLAGAPPA
Ga0132255_1002828011	3300015374	Arabidopsis Rhizosphere	MDPGPAGVDGAGLRTPRARGPRRLLVAGTAAVVVLLAVIAV
Ga0187785_102003191	3300017947	Tropical Peatland	MDRGPDGVDDAGPRTPGVRGSRRLLAAGLVAVAVLLGVITVLAI
Ga0187779_102552661	3300017959	Tropical Peatland	MDSGPAGVDGAGPRTPGVRSSRRLLAAGLAAVVVLLGVIAVLAIRLSGPAPAASAQ
Ga0193722_11232031	3300019877	Soil	MDRGPAGVDGAGPRPPGVRGSRRLIAVGTAAVVVLLGVIAVL
Ga0193724_11257931	3300020062	Soil	MDRGPAGVDGAGPRTPGVRGSRRLIAIGTAAVVVLLGVIAVLATRLADAPPAARAA
Ga0210403_107637692	3300020580	Soil	MDRGPDGAGSHTPGVRGSRRLLAAGLVAVAVLLGVIAVLAIRLSGAAPGASA
Ga0210395_101464394	3300020582	Soil	MDRGPAGVDGAGPRTPGVSGSRRLLAAGIVVVVLLLG
Ga0210401_115322462	3300020583	Soil	MDPGPAGVDGAGPPTPGVRGSRRLLAAGLAAVVVLLVVIAVLATRLAS
Ga0210400_107454203	3300021170	Soil	MDRGPAGVDGAGPRTPGGRGSRRLLAAGLAVVVVLLGVIAVLATRLSGAAPAASAQ
Ga0210393_109745911	3300021401	Soil	MDRGPAGVDGAGPRPSGVRGSRRLLATGIAVLVVLLGVIAVLATQV
Ga0210397_110130062	3300021403	Soil	MDRGPDGAGSHTPGVRGSRRLLAGLAAVVVLLVVIAVLATR
Ga0210389_102510902	3300021404	Soil	MDPGPAGVDGAGPRTPRAGGPRRLLVAGTAAVVVLLAVIAVLAFRLAGTPP
Ga0210389_106351192	3300021404	Soil	MVRGPDGAGSHTPGVRGSRRLLAGLAAVVVLLVVIAVLAT
Ga0210386_103574321	3300021406	Soil	MDRGPAGVDGAGPRPSGARGSRRLLATGIAVVVVLLGVIAV
Ga0210394_108633202	3300021420	Soil	MDRGPAGVDGAGPRTPGVRGSRRLLAAGLVAVVVLLGVIAVLAT
Ga0210384_100437137	3300021432	Soil	MDRGPDGAGSHTPGVRGSRRLLAGLAAVVVLLVVIAVLATRLADAPPEA
Ga0210410_107915732	3300021479	Soil	MDRGPAGGDGAGPPTPGVRGSRRLLAAGLAVVVVPPVVIAVLA
Ga0126371_121802261	3300021560	Tropical Forest Soil	MNREPAALDGTGPRVAGVRRSRRLLAAGLAVVLLGVTAGLAI
Ga0228598_10441171	3300024227	Rhizosphere	MDRGPAGVDGAGPRTPGVSGSRRLLAAGLVVVVLLLG
Ga0247692_10633462	3300024279	Soil	MDPGPAGVDGAGPRTPRARGPRRLLVAGTAAVVVLLAVIAVLAIRLAGTPPAAKAA
Ga0179589_100047728	3300024288	Vadose Zone Soil	MDRGPDGAGSHTPGVRGSRRLLAAGLGAVVVMLVVIAVL
Ga0207653_100145472	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MDPGPAGVDGAGPRTPRARGPRRLLVAGTAAVVVLLAVIAVLAIRLADTPPAAKAAAPRPAPTPP
Ga0207695_114999741	3300025913	Corn Rhizosphere	MDPGPAGVDGAGPRTPRARGPRRLLVAGTAAVVVLLAVIAVLAIRLADTPPAAKAAA
Ga0207693_114841901	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MERGPAGVDDGAGPRLPGVGGSRRLLAAGLAVVVILLGVIAGLAFRLSGPA
Ga0207663_117220761	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MDRGPAGVDGAGPRPPPVRGTRRLIVAGTAVVVVLLVVIAVLATR
Ga0207700_116148972	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MDRGPDGAGSHTPGVRGSRRLLAAGLAAVVVLLAVIA
Ga0207686_108031111	3300025934	Miscanthus Rhizosphere	MDPGPAGVDGAGPRTPRARGPRRLLVAGTAAVVVLLAVIAVLAIRLADT
Ga0207665_115937741	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MVRGPDGAGSHTPGVRGSRRLLAGLAAVVVLLVVIAVLASRLADAPPEAKAATPGPAP
Ga0207668_103638722	3300025972	Switchgrass Rhizosphere	MDPGPAGVDGAGSRTPGARGSRRLLVAGTAAVVVLLAVIAVLATRLAG
Ga0207640_116935131	3300025981	Corn Rhizosphere	MDPGPAGVDGAGPRTPRARGPRRLLVAGTAAVVVLLAVIAVLAIRLADTPPAAKAAAP
Ga0207641_101895131	3300026088	Switchgrass Rhizosphere	MDPGPAGVDGAGPRTPRARGPRRLLVAGTAAVVVLLAVIAVLAIRLADTPPA
Ga0209838_10351061	3300026214	Soil	MERGSAGADGAGPRPPGARRPRRLLATGTAVVVLLAVIAVLATRLA
Ga0209239_13650671	3300026310	Grasslands Soil	MERGPAGVDGAGPPTPGVRGSRRLLAAGLAAVVILLAVIAVLAARLSGAA
Ga0209156_102418801	3300026547	Soil	MDRGPAGVDNAGPPTPGVRGSRRLLAAGLAAVVILLAVIAVLAARLSGA
Ga0209326_10026302	3300026899	Forest Soil	MDPGPAGVDGAGPRTPRARGPRRLLVAGTAAVVVLLAVIAVLAIRLAGTPPAAKAATP
Ga0209114_11071181	3300027504	Forest Soil	MDRGPAGVDDARSATPGVRGSRRLLAAGLAVVAVLLVVVAVLALQLSSSPPA
Ga0209073_102254051	3300027765	Agricultural Soil	MDPGPAGVDGAGPRTPGARGPRRLLAAAAAAMVVLLAVIAVL
Ga0209448_102419031	3300027783	Bog Forest Soil	MDRGPAGVEGARPRTPGVSGSRRLLAAGLAVVVLLLVVIAVLATRLS
Ga0209380_102216102	3300027889	Soil	MDPGPAGVDGAGPPTPGVSGSRRLLAAGLAVVVLLLGVIAVLATRLSGAAP
Ga0209624_106587691	3300027895	Forest Soil	MDRGPAGDDGAGPRPSGVRGSRRLLATGIAVVVILLGVIAVLATQVSGRPP
Ga0268266_116690891	3300028379	Switchgrass Rhizosphere	MDPGPAGVDGAGPRTPRARGPRRLLVAGTAAVVVLLAVIAVLAIRLASTPP
Ga0268264_109666212	3300028381	Switchgrass Rhizosphere	MDPGPAGVDGAGPRTPRARGPRRLLVAGTAAVVVLLAVIAVLAIRLAGTP
Ga0308309_107723352	3300028906	Soil	MDRGPAGGDGAGPPTPGVRGSRRLLAAGLAVVVVLLVVIAVLATRLAGSPPAAKAAKAATPS
Ga0311339_118408382	3300029999	Palsa	MGRGPADADGGGTRPSGVRRTRRLAVAGLAGTMVLLVVIAVLATRLASVSGTAP
Ga0318541_101388413	3300031545	Soil	MDREPAVDGSGPRPAGVRRSRRLLAAGLAVVLLGVIAVLAIRLA
Ga0318571_102204022	3300031549	Soil	MDRGPAGVDGADSGTPRVRRSRRLLAAGLAAAVVLLGVIAVLAA
Ga0310915_100635264	3300031573	Soil	MDRGPTGVDDAGPRTPGVRGSRRLLAAGLAAVVVLLGVIAVLAIRLSG
Ga0306918_102716571	3300031744	Soil	MDRGPTGVDDAGPRTPGVRGSRRLLAAGLAAVVVLLGVIAVLAIRLS
Ga0318546_102130162	3300031771	Soil	MDRGPTGAGPRTPGVRGSRRLLAAGLAGVLILLGVIAVLA
Ga0318552_100241941	3300031782	Soil	MDREPAVDGSGPRPAGVRRSRRLLAAGLAVVLLGVIAVLAIRLAGAAQ
Ga0318548_100461891	3300031793	Soil	MDREPAAVDGTGPRLAGVRRSRRLLAAGLAVVLLGVIAVLAIR
Ga0318576_106233151	3300031796	Soil	MDRGPTGVDDVGPRTPGVRGSRRLLAAGLLAVAVLLGVVTVLAIRLSGA
Ga0318523_102566722	3300031798	Soil	MDREPADVDGTGSRLAGVRRSRRLLAAGLAVVLLGVIAVLAFRLSGA
Ga0318497_106438902	3300031805	Soil	MDRGPAGVDDAGPRTPGVRGSRRLLAAGLAAVVVLIGVIAVLAIRL
Ga0318536_101671651	3300031893	Soil	MDRGPAGVDDAGPRTPGVRGSRRLLAAGLVAVAVLLGVIAMLAIRLSGAPAG
Ga0306921_115456661	3300031912	Soil	MDRGPAGVDDAGPRTPGVRGSRRLLAAGLAAVVVLLGVIAVLAI
Ga0306926_114860112	3300031954	Soil	MDRGPAGVDDAGPRTPGVRGSRRLLAAGLAAVVVLLGVIAVL
Ga0318563_105423592	3300032009	Soil	MDRGPTGAGPRTPGVRGSRPLLAAGLAGVLILLGVIAVLATRL
Ga0318559_104168101	3300032039	Soil	MDRGPTGVDDVGPRTPGVRGSRRLLAAGLLAVAVLLG
Ga0306924_122732461	3300032076	Soil	VDRVPAGVDGTGSRRPGARGSRRLLAAGLAVLVVLLG
Ga0318518_103556661	3300032090	Soil	MDRGPTGAGPRTPGVRGSRPLLAAGLAGVLILLGVIAVLATRLYGTAPGAS
Ga0306920_10000914118	3300032261	Soil	MDRGPTGVDDAGPRTPGVRGSRRLLAAGLAAVVVLLGVIAVLAI
Ga0335085_100811093	3300032770	Soil	MDRGPAGVDDAGPRTPGVRGSRRLLAAGLAAVVVLLGVIAVLAIRL
Ga0335085_110115542	3300032770	Soil	MDRGPTGAGPRTPGARGSRRLLAAGLAAVVILLGVIAVLATRLY
Ga0335082_115652612	3300032782	Soil	MDRGPEGAGSHTPGVRGSRRLLAAGLAAVAVLLAVIAVLAARLAGTAP
Ga0335078_123508992	3300032805	Soil	MDRGPAGVDGAGPRLPGVRGSRRLLAAGLAVVVILLGVIAGL
Ga0335081_113787352	3300032892	Soil	MDRGPDGVDDAGPRTPGVRGSRRLLAAGLVAVAVLIGVIAVLAIRLSGAPAG
Ga0335073_107307091	3300033134	Soil	MDREPAAPDGAGPPPVGGRGSRRLPVAGLAVVVVLLVTVAVLATRLS
Ga0335077_102021391	3300033158	Soil	MDRGPTGAGSRTPGVRGSRRLLAAGLAAVAVLLGVIAVLAIRLS
Ga0335077_109085341	3300033158	Soil	MDRGPAGVDGAGPRTPGARGPRRLLAAGLAVVAVLLGVIAVLAGRLSGAAPA

Hidden Markov Model


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