Metagenome / Metatranscriptome Family F082652

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082652
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	69 residues
Representative Sequence	MKTTAASARSLAAHAVARILREGVTLDAALKDALAAANPKLAPSVRSLSYGAVRGYYRHEAILGRLLSTPVRS
Number of Associated Samples	88
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.67 %
% of genes near scaffold ends (potentially truncated)	65.49 %
% of genes from short scaffolds (< 2000 bps)	63.72 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.522 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.894 % of family members)
Environment Ontology (ENVO)	Unclassified (25.664 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.212 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.39% β-sheet: 0.00% Coil/Unstructured: 38.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF02911	Formyl_trans_C	87.61
PF01327	Pep_deformylase	7.96
PF03060	NMO	0.88
PF00389	2-Hacid_dh	0.88
PF01476	LysM	0.88
PF06969	HemN_C	0.88
PF02481	DNA_processg_A	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0223	Methionyl-tRNA formyltransferase	Translation, ribosomal structure and biogenesis [J]	87.61
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	7.96
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	1.77
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.88
COG0635	Coproporphyrinogen-III oxidase HemN (oxygen-independent) or related Fe-S oxidoreductase	Coenzyme transport and metabolism [H]	0.88
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.52 %
Unclassified	root	N/A	42.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.52 %
Unclassified	root	N/A	42.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.52 %
Unclassified	root	N/A	42.48 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	56.64 %
Unclassified	root	N/A	42.48 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	33.63 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.88 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	15.04 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	3.54 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.77 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	15.04 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	3.54 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.77 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.88 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	15.04 %
unclassified Steroidobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae	1.77 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1.77 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.77 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.88 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	15.04 %
Steroidobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	1.77 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1.77 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.77 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.88 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004091\|Ga0062387_101590900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	527	Open in IMG/M
3300004092\|Ga0062389_103006293	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300004092\|Ga0062389_104282506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	537	Open in IMG/M
3300005147\|Ga0066821_1021531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	547	Open in IMG/M
3300005436\|Ga0070713_100195374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1825	Open in IMG/M
3300005610\|Ga0070763_10168859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1153	Open in IMG/M
3300005995\|Ga0066790_10153608	All Organisms → cellular organisms → Bacteria → Proteobacteria	985	Open in IMG/M
3300006578\|Ga0074059_12155591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1274	Open in IMG/M
3300006606\|Ga0074062_12274840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	625	Open in IMG/M
3300009500\|Ga0116229_11225313	All Organisms → cellular organisms → Bacteria → Proteobacteria	598	Open in IMG/M
3300009650\|Ga0105857_1068913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	933	Open in IMG/M
3300009701\|Ga0116228_10735563	All Organisms → cellular organisms → Bacteria → Proteobacteria	664	Open in IMG/M
3300009787\|Ga0116226_11577939	All Organisms → cellular organisms → Bacteria → Proteobacteria	607	Open in IMG/M
3300012202\|Ga0137363_11135771	All Organisms → cellular organisms → Bacteria → Proteobacteria	664	Open in IMG/M
3300012924\|Ga0137413_10010564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	4505	Open in IMG/M
3300012944\|Ga0137410_11016419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	706	Open in IMG/M
3300014168\|Ga0181534_10363184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	794	Open in IMG/M
3300014169\|Ga0181531_10660378	Not Available	649	Open in IMG/M
3300014201\|Ga0181537_10887351	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300014657\|Ga0181522_10362351	Not Available	864	Open in IMG/M
3300014658\|Ga0181519_11038590	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300015245\|Ga0137409_10705475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	843	Open in IMG/M
3300015245\|Ga0137409_10883212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	730	Open in IMG/M
3300017948\|Ga0187847_10564964	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300017975\|Ga0187782_11366418	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	556	Open in IMG/M
3300018020\|Ga0187861_10437158	All Organisms → cellular organisms → Bacteria → Proteobacteria	545	Open in IMG/M
3300020034\|Ga0193753_10446125	Not Available	502	Open in IMG/M
3300020061\|Ga0193716_1177673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	830	Open in IMG/M
3300020580\|Ga0210403_11428544	Not Available	523	Open in IMG/M
3300020582\|Ga0210395_11155829	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300021168\|Ga0210406_10334126	Not Available	1225	Open in IMG/M
3300021170\|Ga0210400_11329457	All Organisms → cellular organisms → Bacteria → Proteobacteria	575	Open in IMG/M
3300021180\|Ga0210396_10354234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1294	Open in IMG/M
3300021404\|Ga0210389_10261250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1355	Open in IMG/M
3300021407\|Ga0210383_10229552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1591	Open in IMG/M
3300021407\|Ga0210383_10653924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	905	Open in IMG/M
3300021420\|Ga0210394_11829506	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300021474\|Ga0210390_11657573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	502	Open in IMG/M
3300021479\|Ga0210410_10007130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9671	Open in IMG/M
3300021479\|Ga0210410_10186494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1856	Open in IMG/M
3300021479\|Ga0210410_11712823	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300022532\|Ga0242655_10306482	All Organisms → cellular organisms → Bacteria → Proteobacteria	518	Open in IMG/M
3300022726\|Ga0242654_10116166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	858	Open in IMG/M
3300022726\|Ga0242654_10121821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	843	Open in IMG/M
3300026498\|Ga0257156_1137128	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300026557\|Ga0179587_10091776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1824	Open in IMG/M
3300027176\|Ga0208992_1044265	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300027609\|Ga0209221_1185883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	504	Open in IMG/M
3300027667\|Ga0209009_1178488	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300027698\|Ga0209446_1189790	Not Available	529	Open in IMG/M
3300027860\|Ga0209611_10388586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	802	Open in IMG/M
3300028146\|Ga0247682_1005662	Not Available	2168	Open in IMG/M
3300028808\|Ga0302228_10509263	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300028813\|Ga0302157_10140677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1448	Open in IMG/M
3300029945\|Ga0311330_10916817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	654	Open in IMG/M
3300030503\|Ga0311370_10785799	Not Available	1100	Open in IMG/M
3300030503\|Ga0311370_12275600	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300030520\|Ga0311372_12537331	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300030524\|Ga0311357_10201512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1945	Open in IMG/M
3300030693\|Ga0302313_10062792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1601	Open in IMG/M
3300030737\|Ga0302310_10112130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1676	Open in IMG/M
3300030739\|Ga0302311_10258927	Not Available	1284	Open in IMG/M
3300030739\|Ga0302311_10937140	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300030906\|Ga0302314_10519650	Not Available	1273	Open in IMG/M
3300031128\|Ga0170823_15637194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1820	Open in IMG/M
3300031233\|Ga0302307_10376888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	722	Open in IMG/M
3300031236\|Ga0302324_101538484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	862	Open in IMG/M
3300031258\|Ga0302318_10639237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium	537	Open in IMG/M
3300031525\|Ga0302326_10948839	All Organisms → cellular organisms → Bacteria → Proteobacteria	1216	Open in IMG/M
3300031708\|Ga0310686_112079730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	800	Open in IMG/M
3300031708\|Ga0310686_116026711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	569	Open in IMG/M
3300031715\|Ga0307476_10861381	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300031754\|Ga0307475_11382824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	543	Open in IMG/M
3300032180\|Ga0307471_100505543	All Organisms → cellular organisms → Bacteria → Proteobacteria	1357	Open in IMG/M
3300034091\|Ga0326724_0388597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	744	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.81%
Host-Associated	Host-Associated	6.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.34%
Aquatic	Environmental → Aquatic	19.47%
Plants	Host-Associated → Plants	6.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.41%
Freshwater	Environmental → Aquatic → Freshwater	18.58%
Peat	Environmental → Terrestrial → Peat	15.93%
Peat Moss	Host-Associated → Plants → Peat Moss	6.19%
Sediment	Environmental → Aquatic → Sediment	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.93%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	6.19%
Loam	Environmental → Terrestrial → Soil → Loam	5.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.24%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	18.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.93%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	6.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.42%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.89%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	12.39%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	9.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.08%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	6.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.65%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.77%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.77%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061	Environmental	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027176	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030693	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_2	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_103199092	3300004080	Bog Forest Soil	MKGSAASARSLAAHAVARILREGVTLDAALKDALVAADPQLAPSVRSLSYGAVRG
Ga0062385_107350822	3300004080	Bog Forest Soil	MKAAASARSLAAHAVARVLREGVTLDAALKDALSGTDPKLHASVRSLSYGAVRGYFRHEAILAK
Ga0062384_1003459272	3300004082	Bog Forest Soil	MKTTGAGARSLAAHAVARILREGVTLDAALKDALAAADPKLAPTVRSLSYGAVRGYYRHEAILRS
Ga0062387_1005415581	3300004091	Bog Forest Soil	MKTTGAGARSLAAHAVARILREGVTLDAALKDALAAADPKLAPTVRSLSYGAVRGYYRHEAI
Ga0062387_1015909001	3300004091	Bog Forest Soil	MKTTAASARSLAAHAVARILREGVTLDAALKDALAAANPKLAPSVRSLSYGAVRGYYRHEAILGRLLSTPVRS
Ga0062389_1008464812	3300004092	Bog Forest Soil	MRGAAASARSVAAFAVARVLREGVTLDAALKDALVAADPKLFSAVRSLSYGA
Ga0062389_1030062931	3300004092	Bog Forest Soil	MTAAVASARSLSSHAVARVLREGVTLDTALKDALAAADLSLHASVRSLSYGAVRGYYRHEALLGMLL
Ga0062389_1042825061	3300004092	Bog Forest Soil	MRTTAGSARSLAAHAVARVLREGVTLDAALKGALATADPQLAPSVRSLSYGAVRGYYRHEAILGRLLSVPVRSLD
Ga0062388_1002367503	3300004635	Bog Forest Soil	MLRVAMKTTAGSARSLAAHAVARILREGVTLDAALKDALAAADSKLGPSVRSL
Ga0062388_1020940542	3300004635	Bog Forest Soil	MKSAAASARSLSAHAVARVLREGVTLDAALKDALVAADPKLFSAVRSLSYGAVRGYFRHE
Ga0066821_10215311	3300005147	Soil	MRTAGGSARSLAAHAVARILREGVTLDAALKDALAAADPKLAPSVRSLSYGAVRGYFRHEAILRSLLSAPVRS
Ga0070713_1001953743	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRTTGGSARSLAAHALARILREGVTLDAALKDALAAADPKLAPSVRSLSYGAVRGYFRHEAILRSLLS
Ga0070763_101688592	3300005610	Soil	MRGVAASARSVAAHAVARVLREGVTLDAALKDALVAADPKLFSAVRSLSYGAVRGFYRHEAILAKLLSTPVR
Ga0066790_101536081	3300005995	Soil	VSTMPAATTPVARSISAYAVARILREGVTLDQALAGALAAANPAIAPTVRSLCYGAVRGYYRHEAILSRLLSQPVGSLDYLVR
Ga0066790_101957402	3300005995	Soil	MKGAAASARSLAAHAVARLLREGVTLDAALKDALVGADAKLYPSVRSLAYGAVRGYFRHEAIL
Ga0074059_121555911	3300006578	Soil	MRTTGGSARSLAAHAVARILREGVTLDAALKDALAAADPKLAPSVRSLSYGAVRGYFRHEAILRSLL
Ga0074062_122748402	3300006606	Soil	MRTTGGSARSLAAHAVARILREGVTLDAALKDALAAADPKLAPSVRSLSYGAVRGYFRHEAILRSLLSAPVRSL
Ga0116229_102797481	3300009500	Host-Associated	MTNPAAGARSLAAYAVARILREGVTLDAALHDALVAAPAALVPTVRSLSYGAIRGY
Ga0116229_112253131	3300009500	Host-Associated	MNQVPKDTAAGARSVATYAVARILREGVTLDAALHDALATAPGSLAPSVRSLSYGAIRGYFRHEAILGK
Ga0105857_10689131	3300009650	Permafrost Soil	MRAATASARSLAAHAVARLLREGVTLDAALKDALVAADPKLVPSVRSLSYGAVRGFFRHEAILGKLLSTPVRSLDF
Ga0116228_107355631	3300009701	Host-Associated	MNGAAAGARSVAAHAVARIIREGVTLDAALHDAVATAPEGLVPSIRSLTYGAIRGYYRHEAILGRLLSQP
Ga0116226_115779392	3300009787	Host-Associated	MSESTLPPPAGSARSLAAHLVARILKEGITLDTALQHALSAAPAAFGSAVRSLSYGAVRGYYRHEAILGRALSQ
Ga0126347_15886612	3300010867	Boreal Forest Soil	MKGAGASARSLAAHAVARLLREGVTLDAALKDALVAADAKLYSSVRSLGYGAVRGYFR
Ga0126350_113700512	3300010880	Boreal Forest Soil	MKTTGASARSLAAYAVARILREGVTLDAALKDALAAADPKLAPSVRSLSYGAVRGYF
Ga0137363_111357711	3300012202	Vadose Zone Soil	MNNAAAGARSVAAHAVARILREGITLDAALHDALAATPATLGPSVRSLSYGAVRGYYRHEAILSRLLSQPVRSLDVLVGALM
Ga0137385_112768742	3300012359	Vadose Zone Soil	MNNPAAGARSVAAHAVARILREGVTLDAALHDALAATPAGLGPSVRSLSYGAVRGYYR
Ga0137413_100105641	3300012924	Vadose Zone Soil	MKNPAAGARSLAAYAVARILREGVTLDAALHDALAAAPETLGPSVRSLSYGAVRGYFRHEAILGRVLSQPVRSL
Ga0137419_114828851	3300012925	Vadose Zone Soil	MNNPAAGARSLAAYAVARILREGVTLDAALHDALAAAPAGLSPSVRSLGYGAVRGYFRHEAIL
Ga0137419_116310992	3300012925	Vadose Zone Soil	MRGAAASARSLSAHAVARVLREGVTLDAALRDALVAADPKLFSSVRSLSYGAVRGYFR
Ga0137410_110164192	3300012944	Vadose Zone Soil	MRTMGGSARSLAAHALARILREGVTLDAALKDALAAADPKLAPSVRSLSYGAVRGYYRHEAILRSLLSAPVR
Ga0181534_103631841	3300014168	Bog	MSNPAAGARALAASVVARILREGVTLDSALQEALAELPANLKSAARSLSYGAVRGYFRHEAILAKLLS
Ga0181531_106603781	3300014169	Bog	MNNPAAGARSLAAHAVARILREGITLDAALHHALAAAPPALGPPVRSLSYGAVRGFYRHEAILGRVLSQPVRALETYVRALL
Ga0181537_108873512	3300014201	Bog	MNQAVKDTAVGARSVATYAVARILREGVTLDAALRDALATAPATLGPSVRSLSYGAIRGYFRHEALLGKLLSQPVRSLDLQLRALLSV
Ga0181537_112357592	3300014201	Bog	LAAHATARVLREGVTLDSALQDALAAADPKLQSTVRSLGFGAVRGYFRYVAVL
Ga0181522_103623511	3300014657	Bog	MKGASATARSLSAHAVARVLREGVTLDVALKDALVASDPKLFSAVRSLSYGAVRGYFRHEAVLAKLLSGPVRSLDFLVRALLSV
Ga0181519_110385901	3300014658	Bog	MKNPAAGARSLAAFAVARILREGVTLDTALRDALSGAPAHLNAAVRSLCYGAIRGYFRHEAILSRVLSQPVRSLDV
Ga0167644_11054031	3300015206	Glacier Forefield Soil	MKGAAASARSVSAHAVARVLREGVTLDAALKDALVGADPKLFSAVRSLSYGAVRGYFRHEAILAK
Ga0137409_107054752	3300015245	Vadose Zone Soil	MRTMGGSARSLAAHALARILREGVTLDAALKDALAAADPKLAPSVRSLSYGAVRGYYRHEAILRSLLSAPVRSLDFLVR
Ga0137409_108832121	3300015245	Vadose Zone Soil	MKNPAAGARSLAAYAVARISREGVTLDAALHDALAAAPETLGPSVRFLSYGAVRGYFRHEAILGRVLSQPVRSLNTY
Ga0187847_105649641	3300017948	Peatland	VKGAGADARSLAAYAVARILREGVTLDAALHDALAGVPLILVPTVRSLSYGAVRGYYRHEAILGRLLSQPVRSLDSLLRAL
Ga0187847_108517591	3300017948	Peatland	MNNPAAGARSLAAHAVARILREGVTLDVALHDALVAAPASLRPSVRSLSYGAVRGYFR
Ga0187782_113664181	3300017975	Tropical Peatland	MSARTAMVAGVDARSLAVHAVARVLRDGITLDEALEATLAAAPLPRPPAAEPFAVAPAVRSLGYGAVRGYFRHEALLGRLLSQPVKSLDLRVRALFSVALFE
Ga0187861_104371582	3300018020	Peatland	MNAAAGARARAAYVLARILREGVTLDVSLHDALANAPAGFAPAVRSLSYGAVRGYYRHEAILGRLLSQPVRS
Ga0187887_103391851	3300018043	Peatland	MKNPAAGARSLAAYAVARILREGVTLDAALHDALAAAPAGLGPSVRSLSY
Ga0193752_11303901	3300020027	Soil	MRGNAASARSLAAHAVARVLREGVTLDAALKNALVAANPALFPSVRSLSYGAV
Ga0193753_104461252	3300020034	Soil	MKGAAASARSLAAHAVARLLREGVTLDAALKDALVGADAKLYSSVRSLGYGAVRGYFRHEAILGKLLSTPVRSLDFLVRALLS
Ga0193716_11776732	3300020061	Soil	MKGAAASARSLAAHAVARLLREGVTLDAALKDALVGADAKLYSSVRSLGYGAVRGYFRHEAILGKLLSTPVRSLDFLVRALLSVALYE
Ga0210403_114285442	3300020580	Soil	MNSPAAGARAVAAHAVARILREGVTLDAALHDALAATPTGLGPSVRSLCYGAVRGYYRHEAILSRLLTQPVRSLDLLV
Ga0210403_115095892	3300020580	Soil	MKTTGASARSLAAYAVARILREGVTLDAALKDALAAADPKLGPSVRSLSYGAVRGYFR
Ga0210399_112952711	3300020581	Soil	MKTSGAGARSLAAHAVARILREGVTLDAALKDALAAADPKLAPTVRSLSYGAVRGY
Ga0210395_111558291	3300020582	Soil	MKGTVASARSLSAYAVARVLREGVTLDAALKDALVAADPKLFSAVRSLSFGAVRGYFRHEAVLAKLLSQPVRSLD
Ga0210406_103341261	3300021168	Soil	MKGAAASARSVSAHAVARVLREGVTLDAALKDALVAADPRLFSAVRSLSYGAVRGYFRHEAILAKLLSQPVRSLDFLVRALLSV
Ga0210400_113294571	3300021170	Soil	MKTTGASARSLAAYAVARILREGVTLDAALKDALAAADPKLGPSVRSLSYGAVRGYFRHEAILRSVLSAPVKSLDLLVRALLS
Ga0210396_103542343	3300021180	Soil	MKGVAASARSVSAHAVARVLREGVTLDAALKDALVAADPKLFSAVRSLSYGAVRGYFRHEAILGKLLSQPVR
Ga0210388_100339631	3300021181	Soil	MKGAAASARSLSAHAVARVLREGVTLDAALKDALVGVDPKLFSAVRSLSYGAVRGYFRHE
Ga0210397_101469983	3300021403	Soil	MRGAAASARSLSAHAVARVLREGVTLDAALKDALVAADPKLFASVRSLSYGA
Ga0210389_102612501	3300021404	Soil	MKATGASARSLAAYAVARILREGVTLDAALKDALAAADPKLAPSVRSLSYGAVRGYFRHEAILRSVLSAP
Ga0210383_102295521	3300021407	Soil	MKGVAASARSVSAHAVARVLREGVTLDAALKDALVAADPKLFSAVRSLSYGAVRGYFRHEAILGKLLSQPV
Ga0210383_106539242	3300021407	Soil	MKGAAASARSVSAHAVARVLREGVTLDAALKDALVGADPKLFSAVRSLSYGAVRGYFRHEAVLAKLLSQ
Ga0210394_118295061	3300021420	Soil	MTAAAATARSLSAHAVARVLREGVTLDTALKDALAAADPNLHASVRSLSYGAVRGYYRHEAILGMLLT
Ga0210384_104007321	3300021432	Soil	MTTMTASARSLAAYAVARILREGVTLDAALKDALAAANPKLAPSVRSLSYGAVR
Ga0210384_104089782	3300021432	Soil	MKTTAASARSLAAYAVARILREGVTLDAALKDALVAANPQLGRTVRSLSYGAVRGYYR
Ga0210390_116575731	3300021474	Soil	MRVAAAIARSVSAHAVARVLREGVTLDAALKDALAAAEPKLHPSVRSLSYGAVRGYYRHEALLGMLLTQPV
Ga0210392_100436164	3300021475	Soil	MKTTGASARSLAAYAVARILREGVTLDAALKDALAAADPKLAPSVRSLSYGAVRG
Ga0210410_100071301	3300021479	Soil	LRGAAASARSLAAHAVARLLREGVTLDAALKDALVAADAKLHSPVRSLGYGAVRGYFRHEAILGKLLSPPV
Ga0210410_101864943	3300021479	Soil	MRGAAASARSLSAHAVARVLREGVTLDAALKDALVAVDPKLFSSVRSLSYGAVRGYFRHEAILAKLVSGPVRALDFLVRALL
Ga0210410_108191411	3300021479	Soil	MRGAAASARSLSAHAVARVLREGVTLDAALKGALVAADPKLFSSVRSLSYGAVRGYF
Ga0210410_117128231	3300021479	Soil	MKGTVASARSLSAYAVARVLREGVTLDAALKDALVAADPKLFSAVRSLSFGAVRGYFRHEAVLAKLLSQ
Ga0242655_103064821	3300022532	Soil	MRGAAASARSLSAHAVARVLREGVTLDAALKDALVAVDPKLFSSVRSLSYGAVRGYFRHEAILAKLL
Ga0242654_101161661	3300022726	Soil	LKGTVASARSLAAYAVARVLREGVTLDAALKDALVAADSKLHPSVRSLSYGAVRGYFRHEAILGKLLSTPVRSLDF
Ga0242654_101218211	3300022726	Soil	LRGAAASARSLAAHAVARLLREGVTLDAALKDALVAADAKLHSPVRSLGYGAVRGYFRHEAILGKLLSTPVRSLDFL
Ga0257156_11371282	3300026498	Soil	MTASARSLAAHAVARILREGVTLDAALKDALAAANPKLAPSVRSLSYGAVRGYYRHEAILRSVLTAP
Ga0179587_100917761	3300026557	Vadose Zone Soil	MNSPAAGARSVAAHAVARILREGVTLDAALHDALAATPAGLGPSVRSLSYGAVRGYYRHEAILSRLLTQPVR
Ga0208992_10442652	3300027176	Forest Soil	MRASAASARSLAAYAVARLLREGVTLDAALKDALVAADPKLYPSVRSLSFGAVRGYFRHEAILGKLLSTPVRSLDF
Ga0208982_10173483	3300027574	Forest Soil	MRASAASARSLAAYAVARLLREGVTLDAALKDALVAADPKLYPSVRSLSFGAVR
Ga0209221_11858832	3300027609	Forest Soil	MKGAAASARSVAAFAVARVLREGVTLDAALKDALVAADPKLFSAVRSLSYGAVRGFYRHEAMLAKLLSTPVRSLDFLVRALLS
Ga0209009_11784882	3300027667	Forest Soil	MKTTGVGMKTTGASARSLAAYAVARILREGVTLDAALKDALAAADPKLAPSVRSLSYGAVRGYFRHEAILRSV
Ga0209446_11897901	3300027698	Bog Forest Soil	MNTVAGGARSLASHAVARILRDGVTLDAALQSALAAAPTALAPSVRSLSFGAVRGYYRHEAVLGRLLSQP
Ga0209611_103489371	3300027860	Host-Associated	MTNPAAGARSLAAYAVARILREGVTLDAALHDALVAAPAALVPTVRSLSYGAIRGYYRHEAI
Ga0209611_103885862	3300027860	Host-Associated	MKGAAAGARSLAAHAVARILREGVTLDAALHDALVAAPVGLGPTVRSLSYGAMRGYFRHEALLGKLLSQPVRSLEPLVRALF
Ga0209611_104255172	3300027860	Host-Associated	VKSAAAGARSLAAHALARILREGVTLDAALRDALVATDPKLAPSVRSLTYGAVRGYYR
Ga0209698_104208352	3300027911	Watersheds	VNAARSISAYAVARVLREGVTLDVALAGALAATDPALAPSVRSLCYGAVRGYFRHEA
Ga0247682_10056624	3300028146	Soil	MRTTGGSARSLAAHAVARILREGVTLDAALKDALAAADPKLAPSVRSLSYGAVRGYFRHEAILRSLLSAPVRSLDFLVRALL
Ga0137415_113924892	3300028536	Vadose Zone Soil	MNNAAAGARSVAAHAVARILREGITLDAALHDALAATPATLGPSVRSLSYGAVRGYY
Ga0302228_105092632	3300028808	Palsa	MNQAVKDTAAGARSVVTYAVARILREGVTLDAALRDALATAPATLGPSVRSLSYGAIRGYFRHEAILGKLLSQ
Ga0302157_101406773	3300028813	Bog	MTHPAASARIIACFAVARILREGVTLDAALRAALIAAPADVGPAVRSLSYGAVRGYYRHEAILGEVLSQPVRSLEFNVR
Ga0311330_109168171	3300029945	Bog	VLREGVTLDSALQDALAAADPKLKSAVRSLTFGAIRGYFRYVAILGRVSSTPVKSLEFLVQGILAVALYEL
Ga0311338_103134693	3300030007	Palsa	MRGAAASARSLSAYAVARVLREGVTLDAALKDALAAVDAKLHAPVRSLSYGAVRGYYRHE
Ga0311370_107857992	3300030503	Palsa	MRAVAASARSVAAHAVARVLREGVTLDAALKDALVGADPKLFSAVRSLSYGAVRGFYRHEAILAKLLSTPVRSLDFLVRALLSVALY
Ga0311370_122756001	3300030503	Palsa	LAAHATARVLREGVTLDSALQDALAAADPKLQPTVRSLGFGAVRGYFRYVAVLARLASTPVKSLDFL
Ga0311372_125373311	3300030520	Palsa	MNQVSKDTASGARSVATYAVARILREGVTLDAALHDALATAPPSLGPSVRSLSYGAIRGYFRHEAILGKLLSQPVRSLDLQLR
Ga0311357_102015121	3300030524	Palsa	MRGAAASARSLSAYAVARVLREGVTLDAALKDALAAVDAKLHAPVRSLSYGAVRGYYRHEAILGMLLSQPVRSLDFLV
Ga0302313_100627921	3300030693	Palsa	MNQAVKDTAAGARSVATYAVARILREGVTLDAALRDALAAAPASLGPSVRSLSYGAIRGYFRHEAILGKLLSQPVRSLDLQLR
Ga0302310_101121303	3300030737	Palsa	MNQAVKDTAAGARSVATYAVARILREGVTLDAALRDALAAAPASLGPSVRSLSYGAIRGYFRHEAILGK
Ga0302311_102589271	3300030739	Palsa	MRGAAASARSLSAYAVARVLREGVTLDAALKDALAAVDAKLHAPVRSLSYGAVRGYYRHEAILGM
Ga0302311_109371402	3300030739	Palsa	MNQAVKDTAAGARSVVTYAVARILREGVTLDAALRDALATAPATLGPSVRSLSYGAIRGYFRHEAILGKLLS
Ga0302314_105196503	3300030906	Palsa	MRGAAASARSLSAYAVARVLREGVTLDAALKDALAAVDAKLHAPVRSLSYGAVRGYYRHEAILGMLLSQP
Ga0073998_115505112	3300031023	Soil	MTASARSLAAYAVARILREGVTLDAALKDALAAANPKLAPSVRSLSYGAVRGYNREKNKEFIQT
Ga0265760_101072311	3300031090	Soil	MKTTGAGARSLAAHAVARILREGVTLDAALKDALAAADPKLAPAVRSLSYGAVRGYYRHE
Ga0170823_156371941	3300031128	Forest Soil	MTASARSLAAHAVARILREGVTLDAALKDALAAANPKLAPSVRSLSYGAVRGYYRHEAILRSVL
Ga0302307_103768882	3300031233	Palsa	VKTTAGSARSLAAHAVARILREGVTLDTVLKDALVAADPQLAPSVRSLSYGAVRGYYRHEAILGRLLSAPVRS
Ga0302324_1015384841	3300031236	Palsa	MNQAVNDTAAGARSVATYAVARILREGVTLDAALRDALAAAPASLGPSVRSLSYGAIRGYFRHEAILGKLLSQPVRSLDLQL
Ga0302318_106392372	3300031258	Bog	VNAAGGARSLAAHVLARILRDRVTLDTALQNALVAADAALVSPVRSLSYGAARGFFRHEAILGRLLSQPVRSLDPLVRSLLSV
Ga0302326_109488391	3300031525	Palsa	MSALGADARSLAVHAVARILRDGVTLDEALAGTLAAAPHASAPAVRSLSYGAVRGYFRHEAVLGHLLSQRVKSLDLPV
Ga0310686_1046009721	3300031708	Soil	MTGAAASARSLAGYAVARVLREGVTLDAALKDALAAADSQLRPSVRSLSYGAVRGYYRHE
Ga0310686_1120797301	3300031708	Soil	MTAAAATARSLSAHAVARVLREGVTLDTALKDALAAADSSLHPSVRSLSYGAVRGYYRHEAILGM
Ga0310686_1160267112	3300031708	Soil	MKAAAGSARSLAAHAVARILREGVTLDAALKGALTTADPQLAPSVRSLSYGAVRGYYRHEAILGRLLSTPVRSLDFLVRALLS
Ga0310686_1166312931	3300031708	Soil	MKGTAASARSLAAYAVARVLREGVTLDAALKDALVAADSKLHASVRSLSYGAVRGY
Ga0307476_108613812	3300031715	Hardwood Forest Soil	VKTSAGSARSLAAHAVARILREGVTLDAVLKDALAAADPQLAPSVRSLSYGAVRGYYRHEAILGRLLSAPVRSLDH
Ga0307475_113828241	3300031754	Hardwood Forest Soil	MTSMAASARSLAAYAVARILREGVTLDAALKDALAAANPKLAPSVRSLSYGAVRGYYRHEAILRSVL
Ga0307478_113335381	3300031823	Hardwood Forest Soil	MRSAAASARSLSAHAVARVLREAVTLDTALTDALVAADPKLHPSVRSLS
Ga0307471_1005055432	3300032180	Hardwood Forest Soil	MKTTAASARSLAAYAVARILREGVTLDAALKDALAAADPKLAPSVRSLSYGAVRGYFRHEAILRSVLSAPVKSLDLLVRA
Ga0326724_0388597_494_742	3300034091	Peat Soil	MKNPAAGARSLAAHAVARILREGVTLDAALHDALAAAPAGLGPSVRSLSYGAVRGYFRHEAILARVLSQPVRSLDLYVRALLS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082652

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences