Metagenome / Metatranscriptome Family F082636

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082636
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	64 residues
Representative Sequence	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDAFNEIHPE
Number of Associated Samples	86
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.63 %
% of genes near scaffold ends (potentially truncated)	92.92 %
% of genes from short scaffolds (< 2000 bps)	84.96 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.575 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (56.637 % of family members)
Environment Ontology (ENVO)	Unclassified (68.142 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (54.867 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.62% β-sheet: 7.69% Coil/Unstructured: 27.69%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF01850	PIN	38.05
PF07364	DUF1485	27.43
PF02604	PhdYeFM_antitox	7.08
PF12762	DDE_Tnp_IS1595	1.77
PF04367	DUF502	1.77
PF08241	Methyltransf_11	0.88
PF00106	adh_short	0.88
PF01402	RHH_1	0.88
PF01548	DEDD_Tnp_IS110	0.88
PF07171	MlrC_C	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG5476	Microcystin degradation protein MlrC, contains DUF1485 domain	General function prediction only [R]	28.32
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	7.08
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	7.08
COG2928	Uncharacterized membrane protein	Function unknown [S]	1.77
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.58 %
Unclassified	root	N/A	4.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.58 %
Unclassified	root	N/A	4.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.58 %
Unclassified	root	N/A	4.42 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	92.92 %
Unclassified	root	N/A	4.42 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	78.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.42 %
Unclassified	root	N/A	4.42 %

Name	Rank	Taxonomy	Distribution
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	10.62 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	4.42 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	4.42 %
Unclassified	root	N/A	4.42 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.54 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.77 %

Name	Rank	Taxonomy	Distribution
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	10.62 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	4.42 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.42 %
Unclassified	root	N/A	4.42 %
Rhodovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae	0.88 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.88 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	9.73 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.42 %
Unclassified	root	N/A	4.42 %
Nitrospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum	0.88 %
Fodinicurvata	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Fodinicurvata	0.88 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.88 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Caulobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter	5.31 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.42 %
Unclassified	root	N/A	4.42 %
Fodinicurvata sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Fodinicurvata → Fodinicurvata sediminis	0.88 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.88 %
Nitrospirillum amazonense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense	0.88 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Caulobacter sp. K31	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. K31	5.31 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.42 %
Unclassified	root	N/A	4.42 %
Sphingomonas sp. URHD0007	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0007	0.88 %
Fodinicurvata sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Fodinicurvata → Fodinicurvata sediminis	0.88 %
Nitrospirillum amazonense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense	0.88 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004082\|Ga0062384_101400076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300004635\|Ga0062388_100117578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1946	Open in IMG/M
3300005436\|Ga0070713_100130098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2219	Open in IMG/M
3300005446\|Ga0066686_11050163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0007	526	Open in IMG/M
3300005468\|Ga0070707_102198452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	519	Open in IMG/M
3300006606\|Ga0074062_11503192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	520	Open in IMG/M
3300006794\|Ga0066658_10606909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	596	Open in IMG/M
3300007255\|Ga0099791_10352537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	705	Open in IMG/M
3300010048\|Ga0126373_12640344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300010359\|Ga0126376_12071585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300010360\|Ga0126372_10918293	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300010360\|Ga0126372_12429565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300010376\|Ga0126381_101257563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1070	Open in IMG/M
3300010376\|Ga0126381_102629160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	720	Open in IMG/M
3300010398\|Ga0126383_11093652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	887	Open in IMG/M
3300012205\|Ga0137362_11394817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300012208\|Ga0137376_11360068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300012363\|Ga0137390_10411862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1329	Open in IMG/M
3300012582\|Ga0137358_10014882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4922	Open in IMG/M
3300012927\|Ga0137416_10786579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	841	Open in IMG/M
3300016294\|Ga0182041_11396533	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300016294\|Ga0182041_11664209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300016319\|Ga0182033_10375642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1195	Open in IMG/M
3300016341\|Ga0182035_10539267	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300016357\|Ga0182032_11209524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300016371\|Ga0182034_10176679	All Organisms → cellular organisms → Bacteria → Proteobacteria	1631	Open in IMG/M
3300016371\|Ga0182034_10322769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1245	Open in IMG/M
3300016371\|Ga0182034_11110105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	686	Open in IMG/M
3300016371\|Ga0182034_11883811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300016422\|Ga0182039_10252471	All Organisms → cellular organisms → Bacteria → Proteobacteria	1437	Open in IMG/M
3300016445\|Ga0182038_11089596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	710	Open in IMG/M
3300020579\|Ga0210407_10279120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1303	Open in IMG/M
3300020580\|Ga0210403_10909782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	693	Open in IMG/M
3300021170\|Ga0210400_10062627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2902	Open in IMG/M
3300021178\|Ga0210408_10115644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2113	Open in IMG/M
3300021358\|Ga0213873_10066471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. K31	986	Open in IMG/M
3300021439\|Ga0213879_10135913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300021439\|Ga0213879_10148275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	680	Open in IMG/M
3300021476\|Ga0187846_10204006	All Organisms → cellular organisms → Bacteria → Proteobacteria	828	Open in IMG/M
3300021478\|Ga0210402_11594273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300021560\|Ga0126371_10840599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. K31	1063	Open in IMG/M
3300027812\|Ga0209656_10123132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1332	Open in IMG/M
3300027903\|Ga0209488_10105852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2111	Open in IMG/M
3300031231\|Ga0170824_121473844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. K31	1150	Open in IMG/M
3300031446\|Ga0170820_12622657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	737	Open in IMG/M
3300031474\|Ga0170818_114499024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1026	Open in IMG/M
3300031543\|Ga0318516_10860577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300031544\|Ga0318534_10052175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2292	Open in IMG/M
3300031545\|Ga0318541_10875569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300031546\|Ga0318538_10354108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. K31	793	Open in IMG/M
3300031572\|Ga0318515_10376445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300031573\|Ga0310915_10361240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. K31	1030	Open in IMG/M
3300031713\|Ga0318496_10116118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1446	Open in IMG/M
3300031719\|Ga0306917_11482343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300031723\|Ga0318493_10390531	All Organisms → cellular organisms → Bacteria → Proteobacteria	760	Open in IMG/M
3300031747\|Ga0318502_10035972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2537	Open in IMG/M
3300031747\|Ga0318502_10236397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. K31	1064	Open in IMG/M
3300031751\|Ga0318494_10431829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300031764\|Ga0318535_10293757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	727	Open in IMG/M
3300031764\|Ga0318535_10364597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300031765\|Ga0318554_10605048	All Organisms → cellular organisms → Bacteria → Proteobacteria	617	Open in IMG/M
3300031765\|Ga0318554_10820188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	520	Open in IMG/M
3300031779\|Ga0318566_10332238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	751	Open in IMG/M
3300031781\|Ga0318547_10492873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	756	Open in IMG/M
3300031782\|Ga0318552_10432168	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300031792\|Ga0318529_10057323	All Organisms → cellular organisms → Bacteria → Proteobacteria	1692	Open in IMG/M
3300031793\|Ga0318548_10319542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	762	Open in IMG/M
3300031796\|Ga0318576_10389620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300031797\|Ga0318550_10334139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	734	Open in IMG/M
3300031798\|Ga0318523_10010409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3759	Open in IMG/M
3300031819\|Ga0318568_10423633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	829	Open in IMG/M
3300031821\|Ga0318567_10421708	All Organisms → cellular organisms → Bacteria → Proteobacteria	756	Open in IMG/M
3300031845\|Ga0318511_10111718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	1171	Open in IMG/M
3300031846\|Ga0318512_10184184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1017	Open in IMG/M
3300031859\|Ga0318527_10033531	All Organisms → cellular organisms → Bacteria → Proteobacteria	1926	Open in IMG/M
3300031880\|Ga0318544_10118140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	1006	Open in IMG/M
3300031880\|Ga0318544_10221840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	730	Open in IMG/M
3300031890\|Ga0306925_10100565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3077	Open in IMG/M
3300031890\|Ga0306925_10907833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	905	Open in IMG/M
3300031893\|Ga0318536_10086325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1560	Open in IMG/M
3300031893\|Ga0318536_10202738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	1010	Open in IMG/M
3300031896\|Ga0318551_10057722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Fodinicurvata → Fodinicurvata sediminis	1976	Open in IMG/M
3300031896\|Ga0318551_10157233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1243	Open in IMG/M
3300031897\|Ga0318520_10128539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1450	Open in IMG/M
3300031912\|Ga0306921_11030138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	927	Open in IMG/M
3300031941\|Ga0310912_10350970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1146	Open in IMG/M
3300031941\|Ga0310912_10762429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	748	Open in IMG/M
3300031941\|Ga0310912_10823227	All Organisms → cellular organisms → Bacteria → Proteobacteria	716	Open in IMG/M
3300031941\|Ga0310912_11087360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300031946\|Ga0310910_10572251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	896	Open in IMG/M
3300031947\|Ga0310909_10757233	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300031959\|Ga0318530_10279620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	689	Open in IMG/M
3300032010\|Ga0318569_10028528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2308	Open in IMG/M
3300032035\|Ga0310911_10013962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3730	Open in IMG/M
3300032043\|Ga0318556_10359443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300032044\|Ga0318558_10706834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300032051\|Ga0318532_10079026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1150	Open in IMG/M
3300032055\|Ga0318575_10381246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	715	Open in IMG/M
3300032064\|Ga0318510_10136201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	960	Open in IMG/M
3300032064\|Ga0318510_10465159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense	544	Open in IMG/M
3300032090\|Ga0318518_10617342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300032261\|Ga0306920_101619303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	920	Open in IMG/M
3300032261\|Ga0306920_104266817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	514	Open in IMG/M
3300032261\|Ga0306920_104477103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300033289\|Ga0310914_10048645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3484	Open in IMG/M
3300033290\|Ga0318519_10601717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	668	Open in IMG/M
3300033290\|Ga0318519_10901503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	546	Open in IMG/M
3300033290\|Ga0318519_11057846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.11%
Host-Associated	Host-Associated	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.58%
Aquatic	Environmental → Aquatic	3.54%
Plants	Host-Associated → Plants	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.69%
Freshwater	Environmental → Aquatic → Freshwater	3.54%
Cave	Environmental → Terrestrial → Cave	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.54%
Loam	Environmental → Terrestrial → Soil → Loam	1.77%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	75.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.93%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.77%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	56.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.08%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.19%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.65%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062384_1009953621	3300004082	Bog Forest Soil	MAASARLMVLMSQEERASLNAKARALGVSAGEVVRRAVQAFELGTEDEAAELR
Ga0062384_1014000762	3300004082	Bog Forest Soil	MVLMSPEERASLDVKARTLGVSAGEVVRRAVQAFELGTVAEATELRELIDMFNQLHPE
Ga0062388_1001175784	3300004635	Bog Forest Soil	MAASARLMVLMSPEERASLDVKARTLGVSAGEVVRRAVQAFELGTVAEATELRELIDMFNQLHPE
Ga0070713_1001300981	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAASARLMILMSPEERAALDAKARALGVSAGEVVRRAVLAFELGTEEEAAELRTLIDAFNELHPETLRIADECHRKVAET
Ga0066686_110501631	3300005446	Soil	MAASARLMVLMSPEERASLDAKARTLGVSAGEVVRRAVQAFKLGTEEEAAELRGLIDVFNEL
Ga0070707_1021984521	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MVLISPEERAALDVKARTLGVSAGEVVRRAVQAFELGTEEEAAELRSLIDLFNQLHPETLRIAD
Ga0074062_115031922	3300006606	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEAEAAELRELIDV
Ga0066658_106069093	3300006794	Soil	MAASARLMVLMSPEERAALDVTARMLGVSAGEVVRRAVQAFELGTEEETAELRSLIDLFNQLHP
Ga0099791_103525372	3300007255	Vadose Zone Soil	MVLMSPEERSALDVTARMLGVSAGEVVRRAVQAFELGTEEEAAELRSLIDLFNQLPPETLRIA
Ga0126373_126403441	3300010048	Tropical Forest Soil	MVLMSPEERASLDAKARTLGVSAGEVVRRAVQAFELGTQEEAAELRALID
Ga0126376_120715851	3300010359	Tropical Forest Soil	MAATARLMVLMSPEERASLDVKARMLGVSAGEVVRRAVQAFELGTEEEAAELRALIDAFNELHPETLRVA
Ga0126372_109182931	3300010360	Tropical Forest Soil	MVLMSPEERASLNTKARMLGVSAGEVVRRAVQAFELGTEEEAAELRALVDVFNQIHPETLQIAD
Ga0126372_124295651	3300010360	Tropical Forest Soil	MVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDVFNELHPETL
Ga0126381_1012575633	3300010376	Tropical Forest Soil	MVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRRLIDAFNELHPETLRIADECHRKVAEIL
Ga0126381_1026291602	3300010376	Tropical Forest Soil	MVLMSPEERASLDAKARTLGVSAGEVVRRAVQAFELGTQEEAAELRALIDAFN
Ga0126383_110936521	3300010398	Tropical Forest Soil	MVLMSPQERAALDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRGLIDA
Ga0137362_113948171	3300012205	Vadose Zone Soil	MILMSPEERAALDTKARTLGVSAGEVVRRSVQAFELGTEEEAAELRALIDVFDQLHPETLRIADECH
Ga0137376_113600682	3300012208	Vadose Zone Soil	MILMSPEERAALDSKARALGVSAGEVVRRAVQAFELGTEEEAAELRSLIDVFNQLHPETLRIADECHRK
Ga0137390_104118622	3300012363	Vadose Zone Soil	MVLMSPEERAMLDTKARALGLSAGEVVRRAVQAFEVGTEEEAGELRALIDAFNELHPETLRIADEC
Ga0137358_100148821	3300012582	Vadose Zone Soil	MVLMSPEERAAVGVKARTLGVSAGEVVRRAVQAFALGTEEEATELRSLIDPFNRSTPR
Ga0137416_107865794	3300012927	Vadose Zone Soil	MVLKSPEERAALDVKARTLGVSAGEVVRRAVQAFELGTEEEAAELRSLIDLF
Ga0182041_113965332	3300016294	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEQEAAELRSLIDAFSEIHP
Ga0182041_116642091	3300016294	Soil	MVASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRSLIDAFNELHPETLR
Ga0182033_103756422	3300016319	Soil	MAATARLMVLMSPEERASLDVKARTLGVSAGEVVRRAVQAFELGTEEEAAKLRSLIDAFNELHPETLRIADE
Ga0182035_105392671	3300016341	Soil	MAASARLMVLMSPEERESLNAKARALGVSAGEVVRRAVGAFELGTEEEAAELRALIDVFN
Ga0182032_112095241	3300016357	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDVFNEIHPETLRMADECHRKVEEAM
Ga0182034_101766792	3300016371	Soil	MAASARLMVLMSPEERASLNTKARMLGVSAGEVVRRAVQAFELGTEEEAAELRALVDVFNQIHPE
Ga0182034_103227694	3300016371	Soil	MAASARLMVLMSPAERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDMFNEIHPDTLRIADECH
Ga0182034_111101051	3300016371	Soil	MPASARLMVLMSPEERASLDRKARTLGVSAGEVVRRAVQAFELGTEEEAAELRAL
Ga0182034_118838111	3300016371	Soil	MPASARLMVLMSPEERASLDAKARALGVSAGEVVRRAVQAFELGTEEEAAELRELIDVFDQLHPETLRIAD
Ga0182039_102524711	3300016422	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALVDV
Ga0182038_110895961	3300016445	Soil	MAASARLMVLMSPEERAALDTKARTLGVSAGEVVRRAIQAFELGTEEEAAELRGL
Ga0210407_102791204	3300020579	Soil	MPATARLMVLMSPEERAALDAKARALGVSAGEVVRRAVQAFELGTEEEAAELRTLIDAFNELHPETLRIADECHRKVERR
Ga0210403_109097822	3300020580	Soil	MAASARLMVLMSPEERAALDVKARTLGVSAGEVVRRAVEAFELGTEEEAAELRSLIDLFNQLH
Ga0210400_100626275	3300021170	Soil	MPATARLMVLMSPEERAALDAKARALGVSAGEVVRRAVQAFELGTEEEAAELRTLIDAFNELHPETLRIADECHRKVERL
Ga0210408_101156444	3300021178	Soil	EERAALDAKARALGVSAGEVVRRAVQAFELGTEEEAAELRTLIDAFNELHPETLRIADECHRKVERL
Ga0213873_100664713	3300021358	Rhizosphere	MAASARLMVLMSPEERASLDTKARALGVSAGEVVRRAVQAFELGTEEEATELRALIEVFNQVHPETLRIADEAHRK
Ga0213879_101359131	3300021439	Bulk Soil	MAASARLMVLMSPEERASLNAKARALGVSAGEVVRRAVDAFELGSEEEAAELRSLIEVFNQI
Ga0213879_101482751	3300021439	Bulk Soil	MTASARLMVLMSPEERASLDTKARALGVSAGEVVRRAVQAFELGTEEEAAELRALI
Ga0187846_102040062	3300021476	Biofilm	MAASSRLMVLMSPEDRASLDLKARTLGVSAGEVVRRAVRDFEIGTEDEAAELRALIDAFDQLHPETLRIADETH
Ga0210402_115942732	3300021478	Soil	MAASARLMVLMSPQERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRSLIDAFNELHPETLRIADESHRTV
Ga0126371_108405993	3300021560	Tropical Forest Soil	MAASARLMILMSPGERASLDAKARALGVSAGEVVRRAVDAFELGTEEEAAELRSLI
Ga0209656_101231322	3300027812	Bog Forest Soil	MPASARLMVLMSPEERAALNAKARALGVSAGEVVRRAVQAFELGTEEAAAELRALIEAFNQIHPETLRIA
Ga0209488_101058524	3300027903	Vadose Zone Soil	MAASARLMVLMSPEERAALDVTARMLGVSAGEVVRRAVQAFELGTEEEAAELRSL
Ga0170824_1214738441	3300031231	Forest Soil	MAASARLMILMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRGLIDAFN
Ga0170820_126226572	3300031446	Forest Soil	MAASARLMILMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRNLIDAFNELHPETLRIA
Ga0170818_1144990242	3300031474	Forest Soil	MAASARLMILMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRGLIDAFNEE
Ga0318516_101223821	3300031543	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAAEVVRRAVQAFELGTEEEAAELRA
Ga0318516_108605771	3300031543	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRGLID
Ga0318534_100521754	3300031544	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAAEVVRRAVQAFELGTEEEAAELRALIDVFNEIHPE
Ga0318541_108755691	3300031545	Soil	MPASARLMVLMSPEERASLDRKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDAFN
Ga0318538_103541081	3300031546	Soil	MVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRGLIDAFNELHPETLRIADECHRR
Ga0318515_101900281	3300031572	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAAEVVRRAVQAFELGTEEEAAELEG
Ga0318515_103764451	3300031572	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDVFNEIHPETLRMADECHRK
Ga0310915_103612403	3300031573	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVEAFELGTEEEAAELRALIDVFNEIHPETLQIADDC
Ga0318496_101161181	3300031713	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRDLVEVFNQIHPE
Ga0306917_114823431	3300031719	Soil	MAVSARLMVLMSPEERASLDAKARALGVSAGEVVRRAVQAFELGTEAEAAELRELIDVFNQL
Ga0318493_103905312	3300031723	Soil	MAASARLMVLMSPEERASLNTKARMLGVSAGEVVRRAVQAFELGTEEEAAELRALVD
Ga0318502_100359721	3300031747	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRDLVEVFNQIH
Ga0318502_102363971	3300031747	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVEAFELGTEEEAAELRALIDVFNEIHPETLQIAD
Ga0318494_104318293	3300031751	Soil	MVASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRSLIDAFN
Ga0318535_102937572	3300031764	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDVFN
Ga0318535_103645972	3300031764	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVEAFELGTEEEAAELRALIDVFNEIHPE
Ga0318554_106050481	3300031765	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALVDVFNQIHPETLQ
Ga0318554_108201881	3300031765	Soil	MAVSARLMVLMSPEERASLDAKARALGVSAGEVVRRAVQAFELGTEAEAAELRELVDVFNQLHPETLQI
Ga0318566_103322382	3300031779	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRGLIDAFNELHPE
Ga0318547_104928733	3300031781	Soil	MAISARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDV
Ga0318552_104321682	3300031782	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVQAFELGTEEEATELRALVDVFNQIHPETLQI
Ga0318529_100573232	3300031792	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRDLVEVFNQIHPETLQIADECHRKVAE
Ga0318548_103195421	3300031793	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDVFNEIH
Ga0318576_103896203	3300031796	Soil	MVASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELSGLIDA
Ga0318550_103341392	3300031797	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDVFNEIHPETLRMADECHRKVE
Ga0318523_100104091	3300031798	Soil	MAATARLMVLMSPEERALLNTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRGLIDAFN
Ga0318523_102912761	3300031798	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVQAFELGTEEEAAELR
Ga0318568_104236331	3300031819	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDVFNEIHPETLRMADECH
Ga0318567_104217081	3300031821	Soil	MAASARLMVLMSPEERASLNTKARMLGVSAGEVVRRAVQAFELGTEEEAAELRALVDVFNQIHPETLQIADE
Ga0318511_101117183	3300031845	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVEAFELGTEEEAAELRALIDV
Ga0318512_101841842	3300031846	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRDLVE
Ga0318527_100335313	3300031859	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRDLVEVFN
Ga0318544_101181403	3300031880	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAAEVVRRAVQAFELGTEEEAAELRALIDVFNEIHPETLRMADE
Ga0318544_102218401	3300031880	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVEAFELGTEEEAAELRALIDVFNEIHPETLQIADDCHRKLA
Ga0318544_102492541	3300031880	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRA
Ga0306925_101005651	3300031890	Soil	MAASARLMVLMSPDERASLDTKARTLGVSAGEVVRRAVQAFELGSEEEAAELRGLIDAF
Ga0306925_109078333	3300031890	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDVFNEIHPETLRMADE
Ga0318536_100863254	3300031893	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDVFNEIHPETLRMADECHR
Ga0318536_102027383	3300031893	Soil	MPASARLMVLMSPEERASLDRKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDAFNELHPET
Ga0318551_100577223	3300031896	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRDLVDVFNQIHPDTL
Ga0318551_101572331	3300031896	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRDLVEV
Ga0318520_101285394	3300031897	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVEAFELGTEEEAAELRALIDVFNEIHPETLQIADDCHRKLAES
Ga0306921_110301383	3300031912	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRSLID
Ga0310912_103509701	3300031941	Soil	MVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRSLIDAFNELHPETLRIADES
Ga0310912_107624293	3300031941	Soil	MVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRGLIDAFNEIHPETLRIADES
Ga0310912_108232272	3300031941	Soil	MAASARLMVLMSPEERASLNTKARMLGVSAGEVVRRAVQAFELGTEEEAAELRALVDVFN
Ga0310912_110873602	3300031941	Soil	MAISARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDVFNEIHPDTLRIADECHRKVAES
Ga0310910_105722513	3300031946	Soil	MPASARLMVLMSPEERASLDVKARTLGVSAGEVVRRAVQAFELGTEEEAAELRAL
Ga0310909_107572332	3300031947	Soil	MAVSARLMVLMSPEERASLDAKARALGVSAGEVVRRAVQAFELGTEAEAAELRELIDVFNQLHPG
Ga0318530_102796202	3300031959	Soil	MPASARLMVLMSPEERASLDRKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALI
Ga0318569_100285283	3300032010	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRELVDVFNQIHPETLQI
Ga0310911_100139626	3300032035	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDVFNEIHPETLQ
Ga0318556_103594432	3300032043	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDAFNEIHPE
Ga0318558_107068342	3300032044	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDVFNEIHPETLRMADECHRKVEEA
Ga0318532_100790262	3300032051	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRDLVDVFN
Ga0318575_103812461	3300032055	Soil	MAASARLMVLMSPEERASLNTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDVFNEIHPETLQIADDC
Ga0318510_101362014	3300032064	Soil	MVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRGLIDAFNEIHPETL
Ga0318510_104651591	3300032064	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDAFNEIH
Ga0318518_106173422	3300032090	Soil	MATPARLMVLMSPEERAALNDKARALGVSAGEVVRRAVQAFELGSEEEAAELRSLIELFNQLHPET
Ga0306920_1016193031	3300032261	Soil	MPASARLMVLMTPEERASLDAKARALGVSAGEVVRRAVQAFELGTEEEAAELRELIDAFNQLHP
Ga0306920_1042668172	3300032261	Soil	MAATARLMVLMSPEERASLDVKARTLGVSAGEVVRRAVQAFELGTEEEAAKLRSLIDAFNELHPETLRIADECHRKVAE
Ga0306920_1044771032	3300032261	Soil	MSPEERAALDAKARTLGVSAGEVVRRTVQAFELGTEEDAAELQGLIDAFNQLHPET
Ga0310914_100486451	3300033289	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRALIDVFNEI
Ga0318519_106017171	3300033290	Soil	MVASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRGLIDAFN
Ga0318519_109015031	3300033290	Soil	MAASARLMVLMSPEERASLDAKARALGVSAGEVVRRAVGAFELGTEEEAAELRALIDVFD
Ga0318519_110578461	3300033290	Soil	MAASARLMVLMSPEERASLDTKARTLGVSAGEVVRRAVQAFELGTEEEAAELRGLI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082636

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences