Metagenome / Metatranscriptome Family F082615

Basic Information
Family ID	F082615
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	49 residues
Representative Sequence	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFG
Number of Associated Samples	85
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	97.35 %
% of genes from short scaffolds (< 2000 bps)	93.81 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (68.142 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (25.664 % of family members)
Environment Ontology (ENVO)	Unclassified (36.283 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (52.212 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68 1JGI25913J50563_10259531 2Ga0073913_100100333 3Ga0075461_101025081 4Ga0075461_101408193 5Ga0075471_105141782 6Ga0075471_106766922 7Ga0070749_102812543 8Ga0075464_101985281 9Ga0075464_107359201 10Ga0075464_109987812 11Ga0075472_104232803 12Ga0070753_12645591 13Ga0099848_12461702 14Ga0099850_10063476 15Ga0099850_12841692 16Ga0105747_12432352 17Ga0105152_101156521 18Ga0129351_11243273 19Ga0129333_105965591 20Ga0129333_115360392 21Ga0157203_10337381 22Ga0157629_10934681 23Ga0164292_110688922 24Ga0129327_104112633 25Ga0129327_108056062 26Ga0177922_100783392 27Ga0177922_105433202 28Ga0177922_105929002 29Ga0177922_107682551 30Ga0181364_10472561 31Ga0181350_10564191 32Ga0181347_10513511 33Ga0181365_10823051 34Ga0181365_11314232 35Ga0181352_11142331 36Ga0181352_11691192 37Ga0181356_12456721 38Ga0181358_12279502 39Ga0181346_12761872 40Ga0181346_13222702 41Ga0181348_10551374 42Ga0181359_11088683 43Ga0181359_12053631 44Ga0181359_12119652 45Ga0181359_12451351 46Ga0211732_13899343 47Ga0211733_100162223 48Ga0211726_107370241 49Ga0211735_107991803 50Ga0222715_102743541 51Ga0222714_101862741 52Ga0222713_102921941 53Ga0222713_105528093 54Ga0222712_107005091 55Ga0212029_10491991 56Ga0212020_10717661 57Ga0181353_11090083 58Ga0181353_11564081 59Ga0181354_10719761 60Ga0181354_11728651 61Ga0196901_10815971 62Ga0196901_11799861 63Ga0196901_11808091 64Ga0196901_12255851 65Ga0181351_11337831 66Ga0181351_11873491 67Ga0181351_12224661 68Ga0210003_12434761 69Ga0255215_10290371 70Ga0255217_10178781 71Ga0244775_109802593 72Ga0255194_10014625 73Ga0255187_10489542 74Ga0256299_11293241 75Ga0255293_10738272 76Ga0208161_11596011 77Ga0208160_11431032 78Ga0208795_11418152 79Ga0208899_11508103 80Ga0208767_12221151 81Ga0208427_11740713 82Ga0208644_11471251 83Ga0208644_11685321 84Ga0255074_10359101 85Ga0255098_10659921 86Ga0255070_10108764 87Ga0255073_10199041 88Ga0255065_10076681 89Ga0255100_10699952 90Ga0255100_10813072 91Ga0209864_10081783 92Ga0209552_11080283 93Ga0255101_10100024 94Ga0208942_11202703 95Ga0209357_11123841 96Ga0209500_103155773 97Ga0209353_103177681 98Ga0209354_100936381 99Ga0209354_102232391 100Ga0255200_10604901 101Ga0255214_10179553 102Ga0307380_109959152 103Ga0307378_109297473 104Ga0307376_105718741 105Ga0307375_107888221 106Ga0315297_114754032 107Ga0315285_106286751 108Ga0315294_109559341 109Ga0315274_115465121 110Ga0334998_0305286_1_147 111Ga0335066_0291064_797_925 112Ga0335066_0648031_1_138 113Ga0335048_0154718_1133_1309
Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68 1JGI25913J50563_10259531 2Ga0073913_100100333 3Ga0075461_101025081 4Ga0075471_106766922 5Ga0075464_101985281 6Ga0075472_104232803 7Ga0129327_108056062 8Ga0181350_10564191 9Ga0181346_12761872 10Ga0181359_12053631 11Ga0181353_11090083 12Ga0181351_12224661
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68 1JGI25913J50563_10259531 2Ga0073913_100100333 3Ga0075461_101025081 4Ga0075471_106766922 5Ga0075464_101985281 6Ga0075472_104232803 7Ga0129327_108056062 8Ga0181350_10564191 9Ga0181346_12761872 10Ga0181359_12053631 11Ga0181353_11090083 12Ga0181351_12224661
Powered by MSAViewer

Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 41.30% β-sheet: 6.52% Coil/Unstructured: 52.17%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF04586	Peptidase_S78	1.77
PF04860	Phage_portal	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	1.77

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	31.86 %
Unclassified	root	N/A	68.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.14 %
Viruses	superkingdom	All Organisms → Viruses	31.86 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	25.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Unclassified	root	N/A	68.14 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	25.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Unclassified	root	N/A	68.14 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Unclassified	root	N/A	68.14 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	25.66 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	25.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Unclassified	root	N/A	68.14 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	6.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Unclassified	root	N/A	68.14 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %
Unclassified	root	N/A	68.14 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6.19 %

Scaffold	Taxonomy	Length	IMG/M Link
3300003431\|JGI25913J50563_1025953	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	927	Open in IMG/M
3300005940\|Ga0073913_10010033	All Organisms → Viruses → Predicted Viral	1280	Open in IMG/M
3300006637\|Ga0075461_10102508	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	899	Open in IMG/M
3300006637\|Ga0075461_10140819	Not Available	742	Open in IMG/M
3300006641\|Ga0075471_10514178	Not Available	593	Open in IMG/M
3300006641\|Ga0075471_10676692	Not Available	503	Open in IMG/M
3300006802\|Ga0070749_10281254	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	937	Open in IMG/M
3300006805\|Ga0075464_10735920	Not Available	611	Open in IMG/M
3300006805\|Ga0075464_10998781	Not Available	525	Open in IMG/M
3300007346\|Ga0070753_1264559	Not Available	621	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	94.69%
Terrestrial	Environmental → Terrestrial	5.31%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	59.29%
Marine	Environmental → Aquatic → Marine	35.40%
Soil	Environmental → Terrestrial → Soil	5.31%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	3.54%
Coastal	Environmental → Aquatic → Marine → Coastal	29.20%
Lake	Environmental → Aquatic → Freshwater → Lake	17.70%
Lentic	Environmental → Aquatic → Freshwater → Lentic	26.55%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.89%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.89%
River	Environmental → Aquatic → Freshwater → River	14.16%
Sand	Environmental → Terrestrial → Soil → Sand	1.77%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.31%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.42%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.89%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	29.20%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	26.55%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	14.16%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	13.27%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.31%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.54%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	23.89%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.89%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.89%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.42%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.89%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	14.16%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.08%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.31%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.89%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	25.66%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.89%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.89%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	4.42%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	0.89%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	1.77%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.54%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.54%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003431	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN	Environmental	Open in IMG/M
3300005940	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M

Showing 1 to 10 of 85 entries

Previous1 2 3 4 5…9Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25913J50563_10259531	3300003431	Freshwater Lake	MATSTYLSNPVVLIGATSASTTDITDQVSACTVNYIVEALEDTAFGSTARTNTAGL
Ga0073913_100100333	3300005940	Sand	MATSTYLSSPVVLIGATSASTTDISDQVSACTVNYIVEAL
Ga0075461_101025081	3300006637	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFG
Ga0075461_101408193	3300006637	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALED
Ga0075471_105141782	3300006641	Aqueous	MPTSTYLSNPVVLIGASSASTTDITDQVSAVTVNYVVEALEDTAFGSTART
Ga0075471_106766922	3300006641	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFGSTARTNTAGLQSNSAT
Ga0070749_102812543	3300006802	Aqueous	MPTSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTNTAG
Ga0075464_101985281	3300006805	Aqueous	MATSTYLSNPTVTIGAASGSAVDITDQVSAVTVNY
Ga0075464_107359201	3300006805	Aqueous	MATSTYLSNPVVTIGAASGSAVDITDQVSAVTVNYVVEALEDTAFGSTARTNTA
Ga0075464_109987812	3300006805	Aqueous	MATTTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTAR
Ga0075472_104232803	3300006917	Aqueous	MATSTYLSNPKVQIGAAIGSLTDITDQVSAATLTVTKEALEDTAFGSTSRTMTAG
Ga0070753_12645591	3300007346	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFGSTARTNTAGLQSNSATLTV
Ga0099848_12461702	3300007541	Aqueous	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTNTAGLQSNS
Ga0099850_10063476	3300007960	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNVEALEDT
Ga0099850_12841692	3300007960	Aqueous	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTA
Ga0105747_12432352	3300007974	Estuary Water	MATSTYLSNPVVLIGATSASTTDITDQVSACTVNFIVEALED
Ga0105152_101156521	3300009039	Lake Sediment	MATSTYLSNPVVLIGATSASTTDISDQVSACTVNYIVEALEDTAFGS
Ga0129351_11243273	3300010300	Freshwater To Marine Saline Gradient	MATSTYLSNPKVEVGASSGSVTDITDQVSSCVVNFNVEALEDTAFGSTARTNTAGLQSNS
Ga0129333_105965591	3300010354	Freshwater To Marine Saline Gradient	MATSTYLSNPKVEVGASSGSVTDITDQVSSCVVNFNVEALEDTAFGST
Ga0129333_115360392	3300010354	Freshwater To Marine Saline Gradient	MATSTYLSNPVVLIGASSASTTDITDQVSAVTVNYVVEALEDTAFGSTARTNTAGLQSNSATL
Ga0157203_10337381	3300012663	Freshwater	MPTSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALED
Ga0157629_10934681	3300012752	Freshwater	MATSTYLSNPVVKVGAAIGSIVDITDQVSAATLTVTAEALEDTAFGSTSRTMTAGLFSNS
Ga0164292_110688922	3300013005	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTN
Ga0129327_104112633	3300013010	Freshwater To Marine Saline Gradient	MATSTYLSNPKVEIGASSGSVVDITDQVTSCVVNFNVEALED
Ga0129327_108056062	3300013010	Freshwater To Marine Saline Gradient	MASATYLSNPVVLIGATSASTTDITNMVSACSLTVLKEALEDTSFGQTSRT
Ga0177922_100783392	3300013372	Freshwater	MATSTYLSNPVVLIGATSASTTDITDQVSACTVNYIVEA
Ga0177922_105433202	3300013372	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYLVEALEDTAFGSTARTNTAGLQSNSATLTLY
Ga0177922_105929002	3300013372	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTNTAGLQSNSATL
Ga0177922_107682551	3300013372	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEAL
Ga0181364_10472561	3300017701	Freshwater Lake	MATSTYLSNSKVEIGSSSVSVTDITDQVSACTVNFIVEALENTAFGSTARTNTGGLQNNSAS
Ga0181350_10564191	3300017716	Freshwater Lake	MATSTYLSNSVVEIGASSVSVTDITDQVTAVTVNFVVEA
Ga0181347_10513511	3300017722	Freshwater Lake	MATSTYLSNPTVTIGAASGSAVDITDQVSAVTVNYVVEAL
Ga0181365_10823051	3300017736	Freshwater Lake	MATSTYLSNSKVEIGSSSVSVTDITDQVSACTVNFIVEA
Ga0181365_11314232	3300017736	Freshwater Lake	MATSTYLSNSKVEIGSSSVSVTDITDQVSAVTVNFIVSYP
Ga0181352_11142331	3300017747	Freshwater Lake	MATSTYPSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTN
Ga0181352_11691192	3300017747	Freshwater Lake	MPTSTYLSNPVVLIGASSAAPTDIPDQVSAVTVNYLVEALED
Ga0181356_12456721	3300017761	Freshwater Lake	MATSTYLSNSVVEIGASSVSVTDITDQVTAVTVNFVVEALED
Ga0181358_12279502	3300017774	Freshwater Lake	MATSTYLSNSVVEIGASSVSVTDITDQVTAVTVNFVVEALEDT
Ga0181346_12761872	3300017780	Freshwater Lake	MATSTYLSNSKVEIGSSSVSVTDITDQVSACTVNFIVEALENTAFGATART
Ga0181346_13222702	3300017780	Freshwater Lake	MATSTYLSNSVVEIGASSVSVTDITDQVTAVTVNFVVEALEDTAFGS
Ga0181348_10551374	3300017784	Freshwater Lake	MATSTYLSNSKVEIGSSSVSVTDITDQVSACTVNFIVE
Ga0181359_11088683	3300019784	Freshwater Lake	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNY
Ga0181359_12053631	3300019784	Freshwater Lake	MATSTYLSNSVIEIGPSSASVTDITDQVTAVTVNFVVEALEDTAFGSTARTNTGGLQNNSASITLY
Ga0181359_12119652	3300019784	Freshwater Lake	MATSTYLSNAVVLIGASSAATTDITDQVSAVTVNYVVEALE
Ga0181359_12451351	3300019784	Freshwater Lake	MATSTYLSNSVVEIGASSVSVTDITDQVTAVTVNYVVEALED
Ga0211732_13899343	3300020141	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVE
Ga0211733_100162223	3300020160	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTNTA
Ga0211726_107370241	3300020161	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEA
Ga0211735_107991803	3300020162	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFG
Ga0222715_102743541	3300021960	Estuarine Water	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFGSTARTNTAGLQSNSATLTVY
Ga0222714_101862741	3300021961	Estuarine Water	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAF
Ga0222713_102921941	3300021962	Estuarine Water	MATSTYLSNPVVLIGATSAATTDITDQVSAVTVNYVVEALEAT
Ga0222713_105528093	3300021962	Estuarine Water	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNVEALEDTAFGSTARTNTAG
Ga0222712_107005091	3300021963	Estuarine Water	MATSTYLSNPVVLVGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTNTAGLQS
Ga0212029_10491991	3300022063	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNVEALE
Ga0212020_10717661	3300022167	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFGSTA
Ga0181353_11090083	3300022179	Freshwater Lake	MATSTYLSNPVVLIGATSAATTDITDQVSAATLTVTAEALEDTAFGSI
Ga0181353_11564081	3300022179	Freshwater Lake	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAF
Ga0181354_10719761	3300022190	Freshwater Lake	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVV
Ga0181354_11728651	3300022190	Freshwater Lake	MATSTYLSNPVVLIGASSASTTDITDQVSAVTVNYVVEAL
Ga0196901_10815971	3300022200	Aqueous	MATSTYLSNPKVEVGASSGSVTDITDQVSSCVVNFNVEALED
Ga0196901_11799861	3300022200	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNVEALEDTAFGSTARTNT
Ga0196901_11808091	3300022200	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNVEALEDTAFGSTARTNTAGLQSN
Ga0196901_12255851	3300022200	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYN
Ga0181351_11337831	3300022407	Freshwater Lake	MATSTYLSNSVVEIGASSVSVTDITDQVTAVTVNFVVEALEDTA
Ga0181351_11873491	3300022407	Freshwater Lake	MATSTYLSNPKVEIGASSVSVTNITDNVSACVVNFNVEALEDTAFGSTARTNTAGLQSNSATL
Ga0181351_12224661	3300022407	Freshwater Lake	MATSTYLSNPKVEIGASSVSVTNITDNVSACVVNFN
Ga0210003_12434761	3300024262	Deep Subsurface	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNV
Ga0255215_10290371	3300024278	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYV
Ga0255217_10178781	3300024282	Freshwater	MPTSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGST
Ga0244775_109802593	3300024346	Estuarine	MATSTYLSNPTVTIGTSSATAVDITDQISAVTVNYVVE
Ga0255194_10014625	3300024494	Freshwater	MPTSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTNT
Ga0255187_10489542	3300024510	Freshwater	MATSTYLSNPVVLIGASSASTTDITDQVSAVTVNYVVEALEDTAFGSTARTNTAG
Ga0256299_11293241	3300024533	Freshwater	MATSTYLSSPVVLIGATSASTTDISDQVSACTVNYIVEALEDTAFGSTARTNTA
Ga0255293_10738272	3300024851	Freshwater	MPTSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTART
Ga0208161_11596011	3300025646	Aqueous	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTNTAGL
Ga0208160_11431032	3300025647	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSAVTVNY
Ga0208795_11418152	3300025655	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDT
Ga0208899_11508103	3300025759	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFGSTARTN
Ga0208767_12221151	3300025769	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFGSTARTNTAGLQSNSATL
Ga0208427_11740713	3300025771	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNVEALEDTAFGST
Ga0208644_11471251	3300025889	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFGSTARTNTAGLQS
Ga0208644_11685321	3300025889	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFGS
Ga0255074_10359101	3300027121	Freshwater	MATSTYLSNPTVTIGASSATAVDITDQISAVTVNYIVEALEDTAFGSTARTNTAGLQSN
Ga0255098_10659921	3300027126	Freshwater	MATSTYLSNPKVQVGAAIGSITDITDQVSAATLTVTKEALEDTAFGSTSRTMTA
Ga0255070_10108764	3300027133	Freshwater	MATSTYLSNPVVLIGATSAATTDITDQVSAATLTVTAEALEDTAF
Ga0255073_10199041	3300027135	Freshwater	MATSTYLSNPTVTIGASSATAVDITDQISAVTVNYIVEALEDTAFG
Ga0255065_10076681	3300027142	Freshwater	MATSTYLSNPVVLIGATSAATTDITDQVSAATLTVTAEALED
Ga0255100_10699952	3300027152	Freshwater	MATSTYLSNPTVTIGASSATAVDITDQISAVTVNYIVEALEDTAFGSTARTNTA
Ga0255100_10813072	3300027152	Freshwater	MATSTYLSNPTVLIGATSASTTDITDQVSACTVNYIVEALEDTAFG
Ga0209864_10081783	3300027547	Sand	MATSTYLSSPVVLIGATSASTTDISDQVSACTVNYIVEALEDTAFGSTARTNT
Ga0209552_11080283	3300027563	Freshwater Lake	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALED
Ga0255101_10100024	3300027588	Freshwater	MATSTYLSNPVVLIGATSAATTDITDQVSAATLTVTAEALEDTA
Ga0208942_11202703	3300027627	Freshwater Lentic	MATSTYLSNSKVEIGSSSASVTDITDQVSACTVNFLVEALENTAFGATARTNTGGLQNNSASLTVY
Ga0209357_11123841	3300027656	Freshwater Lake	MATSTYLSNSVVEIGASSVSVTDITDQVTAVTVNFVVEALEDTAFGSTARTNTGGLQNNS
Ga0209500_103155773	3300027782	Freshwater Lake	MATSTYLSNPTVTIGAASGSAVDITDQVSAVTVNYVVEALEDTA
Ga0209353_103177681	3300027798	Freshwater Lake	MATSTYLANSVVEIGPSSASVTDITDQVTAVTVNFVVEALEDTAFGSTARTNTGGLQNNSASITL
Ga0209354_100936381	3300027808	Freshwater Lake	MATSTYLSNPKVEIGASSVSVTNITDNVSACVVNFNVEALEDTAFGSTARTNTAGLQSN
Ga0209354_102232391	3300027808	Freshwater Lake	MATSTYLANSVVEIGASSVSVTDITDQVTAVTVNFVVEALEDTAFGST
Ga0255200_10604901	3300028066	Freshwater	MPTSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEAL
Ga0255214_10179553	3300028258	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTNTAGLQSN
Ga0307380_109959152	3300031539	Soil	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNVEALEDTAFGSTARTNTA
Ga0307378_109297473	3300031566	Soil	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNVEALEDTAF
Ga0307376_105718741	3300031578	Soil	MSTSTYLSNPKVEVGASSGSVVDITDQVSSCVVNF
Ga0307375_107888221	3300031669	Soil	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNF
Ga0315297_114754032	3300031873	Sediment	MATSTYLSNPVVLIGSSSASTTDITDQVSACTVNYIVEALEDTAFGSTAR
Ga0315285_106286751	3300031885	Sediment	MATSTYLSNPVVLIGSSSASTTDISDQVSACTVNYIVEALEDTAFGSTARTNTAGLQSNSATLTLY
Ga0315294_109559341	3300031952	Sediment	MATSTYLSNPVVLIGSSSASTTDISDQVSACTVNYIVEALEDTAFGSTARTNTAGLQSNSATLTLYAS
Ga0315274_115465121	3300031999	Sediment	MATSTYLSNPVVLIGSSSASTTDISDQVSACTVNYIVEALEDTAFGSTARTNTAGLQS
Ga0334998_0305286_1_147	3300034019	Freshwater	MPTSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTA
Ga0335066_0291064_797_925	3300034112	Freshwater	MATSTYLSNPVVLIGATSAATTDITDQVSAATLTVTAEALEDT
Ga0335066_0648031_1_138	3300034112	Freshwater	MPTSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFG
Ga0335048_0154718_1133_1309	3300034356	Freshwater	MATSTYLSNPVVLIGATSASTTDITDQVSACTVNYIVEALEDTAFGSTARTNTAGLQSN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082615

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences