Metagenome / Metatranscriptome Family F082615

Overview

Basic Information

• Family ID: F082615
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 113
• Average Sequence Length: 49 residues
• Representative Sequence: MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFG
• Number of Associated Samples: 85
• Number of Associated Scaffolds: 113

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 100.00 %
• % of genes near scaffold ends (potentially truncated): 97.35 %
• % of genes from short scaffolds (< 2000 bps): 93.81 %
• Associated GOLD sequencing projects: 80
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (68.142 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (25.664 % of family members)
• Environment Ontology (ENVO): Unclassified (36.283 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (52.212 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: Yes
• Secondary Structure distribution:
  α-helix: 41.30%
  β-sheet: 6.52%
  Coil/Unstructured: 52.17%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF04586	Peptidase_S78	1.77
PF04860	Phage_portal	0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	1.77

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.14 %
All Organisms	root	All Organisms	31.86 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.14 %
Viruses	superkingdom	All Organisms → Viruses	31.86 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.14 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	25.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.14 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	25.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.14 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	25.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.14 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	25.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.14 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	6.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.14 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.19 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300003431|JGI25913J50563_1025953	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	927
3300005940|Ga0073913_10010033	All Organisms → Viruses → Predicted Viral	1280
3300006637|Ga0075461_10102508	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	899
3300006637|Ga0075461_10140819	Not Available	742
3300006641|Ga0075471_10514178	Not Available	593
3300006641|Ga0075471_10676692	Not Available	503
3300006802|Ga0070749_10281254	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	937
3300006805|Ga0075464_10735920	Not Available	611
3300006805|Ga0075464_10998781	Not Available	525
3300007346|Ga0070753_1264559	Not Available	621
3300007541|Ga0099848_1246170	Not Available	627
3300007960|Ga0099850_1006347	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5474
3300007960|Ga0099850_1284169	Not Available	631
3300007974|Ga0105747_1243235	Not Available	601
3300009039|Ga0105152_10115652	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1093
3300010300|Ga0129351_1124327	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1027
3300010354|Ga0129333_10596559	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	959
3300010354|Ga0129333_11536039	Not Available	545
3300012663|Ga0157203_1033738	Not Available	713
3300012752|Ga0157629_1093468	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3044
3300013005|Ga0164292_11068892	Not Available	500
3300013010|Ga0129327_10411263	Not Available	719
3300013010|Ga0129327_10805606	Not Available	533
3300013372|Ga0177922_10078339	Not Available	723
3300013372|Ga0177922_10543320	Not Available	529
3300013372|Ga0177922_10592900	Not Available	620
3300013372|Ga0177922_10768255	Not Available	591
3300017701|Ga0181364_1047256	Not Available	678
3300017716|Ga0181350_1056419	All Organisms → Viruses → Predicted Viral	1032
3300017736|Ga0181365_1082305	Not Available	788
3300017736|Ga0181365_1131423	Not Available	598
3300017747|Ga0181352_1114233	Not Available	732
3300017747|Ga0181352_1169119	Not Available	571
3300017761|Ga0181356_1245672	Not Available	512
3300017774|Ga0181358_1227950	Not Available	596
3300017780|Ga0181346_1276187	Not Available	578
3300017780|Ga0181346_1322270	Not Available	519
3300017784|Ga0181348_1055137	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1619
3300019784|Ga0181359_1108868	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1006
3300019784|Ga0181359_1205363	Not Available	631
3300019784|Ga0181359_1211965	Not Available	616
3300019784|Ga0181359_1245135	Not Available	547
3300020141|Ga0211732_1389934	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	850
3300020160|Ga0211733_10016222	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	964
3300020161|Ga0211726_10737024	Not Available	687
3300020162|Ga0211735_10799180	All Organisms → Viruses → Predicted Viral	1306
3300021960|Ga0222715_10274354	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	969
3300021961|Ga0222714_10186274	Not Available	1210
3300021962|Ga0222713_10292194	Not Available	1042
3300021962|Ga0222713_10552809	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	679
3300021963|Ga0222712_10700509	Not Available	571
3300022063|Ga0212029_1049199	Not Available	609
3300022167|Ga0212020_1071766	Not Available	583
3300022179|Ga0181353_1109008	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	673
3300022179|Ga0181353_1156408	Not Available	521
3300022190|Ga0181354_1071976	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1145
3300022190|Ga0181354_1172865	Not Available	662
3300022200|Ga0196901_1081597	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1152
3300022200|Ga0196901_1179986	Not Available	688
3300022200|Ga0196901_1180809	Not Available	686
3300022200|Ga0196901_1225585	Not Available	591
3300022407|Ga0181351_1133783	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	913
3300022407|Ga0181351_1187349	Not Available	705
3300022407|Ga0181351_1222466	Not Available	611
3300024262|Ga0210003_1243476	Not Available	714
3300024278|Ga0255215_1029037	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	882
3300024282|Ga0255217_1017878	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1174
3300024346|Ga0244775_10980259	Not Available	668
3300024494|Ga0255194_1001462	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4101
3300024510|Ga0255187_1048954	Not Available	570
3300024533|Ga0256299_1129324	Not Available	504
3300024851|Ga0255293_1073827	Not Available	627
3300025646|Ga0208161_1159601	Not Available	553
3300025647|Ga0208160_1143103	Not Available	585
3300025655|Ga0208795_1141815	Not Available	608
3300025759|Ga0208899_1150810	Not Available	795
3300025769|Ga0208767_1222115	Not Available	615
3300025771|Ga0208427_1174071	Not Available	698
3300025889|Ga0208644_1147125	All Organisms → Viruses → Predicted Viral	1085
3300025889|Ga0208644_1168532	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	984
3300027121|Ga0255074_1035910	Not Available	615
3300027126|Ga0255098_1065992	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	529
3300027133|Ga0255070_1010876	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1596
3300027135|Ga0255073_1019904	All Organisms → Viruses → Predicted Viral	1199
3300027142|Ga0255065_1007668	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2315
3300027152|Ga0255100_1069995	Not Available	628
3300027152|Ga0255100_1081307	Not Available	570
3300027547|Ga0209864_1008178	All Organisms → Viruses → Predicted Viral	1159
3300027563|Ga0209552_1108028	Not Available	741
3300027588|Ga0255101_1010002	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1553
3300027627|Ga0208942_1120270	Not Available	730
3300027656|Ga0209357_1112384	Not Available	758
3300027782|Ga0209500_10315577	Not Available	657
3300027798|Ga0209353_10317768	Not Available	656
3300027808|Ga0209354_10093638	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1225
3300027808|Ga0209354_10223239	Not Available	760
3300028066|Ga0255200_1060490	Not Available	526
3300028258|Ga0255214_1017955	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1222
3300031539|Ga0307380_10995915	Not Available	669
3300031566|Ga0307378_10929747	Not Available	716
3300031578|Ga0307376_10571874	Not Available	723
3300031669|Ga0307375_10788822	Not Available	538
3300031873|Ga0315297_11475403	Not Available	550
3300031885|Ga0315285_10628675	Not Available	706
3300031952|Ga0315294_10955934	Not Available	719
3300031999|Ga0315274_11546512	Not Available	627
3300034019|Ga0334998_0305286	Not Available	944
3300034112|Ga0335066_0291064	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	927
3300034112|Ga0335066_0648031	Not Available	540
3300034356|Ga0335048_0154718	All Organisms → Viruses → Predicted Viral	1309

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	94.69%
Terrestrial	Environmental → Terrestrial	5.31%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	59.29%
Marine	Environmental → Aquatic → Marine	35.40%
Soil	Environmental → Terrestrial → Soil	5.31%

Type

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	29.20%
Lentic	Environmental → Aquatic → Freshwater → Lentic	26.55%
Lake	Environmental → Aquatic → Freshwater → Lake	17.70%
River	Environmental → Aquatic → Freshwater → River	14.16%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.31%
Clay	Environmental → Terrestrial → Soil → Clay	3.54%
Sand	Environmental → Terrestrial → Soil → Sand	1.77%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.89%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.89%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	29.20%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	26.55%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	14.16%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	13.27%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.31%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.42%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.54%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.89%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.89%

Habitat

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	25.66%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	23.89%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	14.16%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.08%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.31%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	4.42%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.42%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.54%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.54%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	1.77%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.89%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.89%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.89%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.89%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.89%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.89%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300003431	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN	Environmental
3300005940	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14	Environmental
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental
3300009039	Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm	Environmental
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental
3300012752	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES162 metaT (Metagenome Metatranscriptome)	Environmental
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental
3300022063	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)	Environmental
3300022167	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)	Environmental
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental
3300024262	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)	Environmental
3300024278	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Law_RepC_8d	Environmental
3300024282	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepB_8d	Environmental
3300024346	Whole water sample coassembly	Environmental
3300024494	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Yuk_RepB_8h	Environmental
3300024510	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepA_8h	Environmental
3300024533	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepC_8h (Metagenome Metatranscriptome)	Environmental
3300024851	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepC_8h (Metagenome Metatranscriptome)	Environmental
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental
3300025647	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)	Environmental
3300025655	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)	Environmental
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental
3300025771	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)	Environmental
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental
3300027121	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepC_8h	Environmental
3300027126	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepC_8d	Environmental
3300027133	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepB_8h	Environmental
3300027135	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepB_8h	Environmental
3300027142	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_0h	Environmental
3300027152	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepB_8d	Environmental
3300027547	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14 (SPAdes)	Environmental
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental
3300027588	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepC_8d	Environmental
3300027627	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)	Environmental
3300027656	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes)	Environmental
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental
3300028066	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepB_8h	Environmental
3300028258	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Law_RepB_8d	Environmental
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental
3300031669	Soil microbial communities from Risofladan, Vaasa, Finland - TR-1	Environmental
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25913J50563_10259531	3300003431	Freshwater Lake	MATSTYLSNPVVLIGATSASTTDITDQVSACTVNYIVEALEDTAFGSTARTNTAGL
Ga0073913_100100333	3300005940	Sand	MATSTYLSSPVVLIGATSASTTDISDQVSACTVNYIVEAL
Ga0075461_101025081	3300006637	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFG
Ga0075461_101408193	3300006637	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALED
Ga0075471_105141782	3300006641	Aqueous	MPTSTYLSNPVVLIGASSASTTDITDQVSAVTVNYVVEALEDTAFGSTART
Ga0075471_106766922	3300006641	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFGSTARTNTAGLQSNSAT
Ga0070749_102812543	3300006802	Aqueous	MPTSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTNTAG
Ga0075464_101985281	3300006805	Aqueous	MATSTYLSNPTVTIGAASGSAVDITDQVSAVTVNY
Ga0075464_107359201	3300006805	Aqueous	MATSTYLSNPVVTIGAASGSAVDITDQVSAVTVNYVVEALEDTAFGSTARTNTA
Ga0075464_109987812	3300006805	Aqueous	MATTTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTAR
Ga0075472_104232803	3300006917	Aqueous	MATSTYLSNPKVQIGAAIGSLTDITDQVSAATLTVTKEALEDTAFGSTSRTMTAG
Ga0070753_12645591	3300007346	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFGSTARTNTAGLQSNSATLTV
Ga0099848_12461702	3300007541	Aqueous	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTNTAGLQSNS
Ga0099850_10063476	3300007960	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNVEALEDT
Ga0099850_12841692	3300007960	Aqueous	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTA
Ga0105747_12432352	3300007974	Estuary Water	MATSTYLSNPVVLIGATSASTTDITDQVSACTVNFIVEALED
Ga0105152_101156521	3300009039	Lake Sediment	MATSTYLSNPVVLIGATSASTTDISDQVSACTVNYIVEALEDTAFGS
Ga0129351_11243273	3300010300	Freshwater To Marine Saline Gradient	MATSTYLSNPKVEVGASSGSVTDITDQVSSCVVNFNVEALEDTAFGSTARTNTAGLQSNS
Ga0129333_105965591	3300010354	Freshwater To Marine Saline Gradient	MATSTYLSNPKVEVGASSGSVTDITDQVSSCVVNFNVEALEDTAFGST
Ga0129333_115360392	3300010354	Freshwater To Marine Saline Gradient	MATSTYLSNPVVLIGASSASTTDITDQVSAVTVNYVVEALEDTAFGSTARTNTAGLQSNSATL
Ga0157203_10337381	3300012663	Freshwater	MPTSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALED
Ga0157629_10934681	3300012752	Freshwater	MATSTYLSNPVVKVGAAIGSIVDITDQVSAATLTVTAEALEDTAFGSTSRTMTAGLFSNS
Ga0164292_110688922	3300013005	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTN
Ga0129327_104112633	3300013010	Freshwater To Marine Saline Gradient	MATSTYLSNPKVEIGASSGSVVDITDQVTSCVVNFNVEALED
Ga0129327_108056062	3300013010	Freshwater To Marine Saline Gradient	MASATYLSNPVVLIGATSASTTDITNMVSACSLTVLKEALEDTSFGQTSRT
Ga0177922_100783392	3300013372	Freshwater	MATSTYLSNPVVLIGATSASTTDITDQVSACTVNYIVEA
Ga0177922_105433202	3300013372	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYLVEALEDTAFGSTARTNTAGLQSNSATLTLY
Ga0177922_105929002	3300013372	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTNTAGLQSNSATL
Ga0177922_107682551	3300013372	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEAL
Ga0181364_10472561	3300017701	Freshwater Lake	MATSTYLSNSKVEIGSSSVSVTDITDQVSACTVNFIVEALENTAFGSTARTNTGGLQNNSAS
Ga0181350_10564191	3300017716	Freshwater Lake	MATSTYLSNSVVEIGASSVSVTDITDQVTAVTVNFVVEA
Ga0181347_10513511	3300017722	Freshwater Lake	MATSTYLSNPTVTIGAASGSAVDITDQVSAVTVNYVVEAL
Ga0181365_10823051	3300017736	Freshwater Lake	MATSTYLSNSKVEIGSSSVSVTDITDQVSACTVNFIVEA
Ga0181365_11314232	3300017736	Freshwater Lake	MATSTYLSNSKVEIGSSSVSVTDITDQVSAVTVNFIVSYP
Ga0181352_11142331	3300017747	Freshwater Lake	MATSTYPSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTN
Ga0181352_11691192	3300017747	Freshwater Lake	MPTSTYLSNPVVLIGASSAAPTDIPDQVSAVTVNYLVEALED
Ga0181356_12456721	3300017761	Freshwater Lake	MATSTYLSNSVVEIGASSVSVTDITDQVTAVTVNFVVEALED
Ga0181358_12279502	3300017774	Freshwater Lake	MATSTYLSNSVVEIGASSVSVTDITDQVTAVTVNFVVEALEDT
Ga0181346_12761872	3300017780	Freshwater Lake	MATSTYLSNSKVEIGSSSVSVTDITDQVSACTVNFIVEALENTAFGATART
Ga0181346_13222702	3300017780	Freshwater Lake	MATSTYLSNSVVEIGASSVSVTDITDQVTAVTVNFVVEALEDTAFGS
Ga0181348_10551374	3300017784	Freshwater Lake	MATSTYLSNSKVEIGSSSVSVTDITDQVSACTVNFIVE
Ga0181359_11088683	3300019784	Freshwater Lake	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNY
Ga0181359_12053631	3300019784	Freshwater Lake	MATSTYLSNSVIEIGPSSASVTDITDQVTAVTVNFVVEALEDTAFGSTARTNTGGLQNNSASITLY
Ga0181359_12119652	3300019784	Freshwater Lake	MATSTYLSNAVVLIGASSAATTDITDQVSAVTVNYVVEALE
Ga0181359_12451351	3300019784	Freshwater Lake	MATSTYLSNSVVEIGASSVSVTDITDQVTAVTVNYVVEALED
Ga0211732_13899343	3300020141	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVE
Ga0211733_100162223	3300020160	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTNTA
Ga0211726_107370241	3300020161	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEA
Ga0211735_107991803	3300020162	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFG
Ga0222715_102743541	3300021960	Estuarine Water	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFGSTARTNTAGLQSNSATLTVY
Ga0222714_101862741	3300021961	Estuarine Water	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAF
Ga0222713_102921941	3300021962	Estuarine Water	MATSTYLSNPVVLIGATSAATTDITDQVSAVTVNYVVEALEAT
Ga0222713_105528093	3300021962	Estuarine Water	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNVEALEDTAFGSTARTNTAG
Ga0222712_107005091	3300021963	Estuarine Water	MATSTYLSNPVVLVGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTNTAGLQS
Ga0212029_10491991	3300022063	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNVEALE
Ga0212020_10717661	3300022167	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFGSTA
Ga0181353_11090083	3300022179	Freshwater Lake	MATSTYLSNPVVLIGATSAATTDITDQVSAATLTVTAEALEDTAFGSI
Ga0181353_11564081	3300022179	Freshwater Lake	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAF
Ga0181354_10719761	3300022190	Freshwater Lake	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVV
Ga0181354_11728651	3300022190	Freshwater Lake	MATSTYLSNPVVLIGASSASTTDITDQVSAVTVNYVVEAL
Ga0196901_10815971	3300022200	Aqueous	MATSTYLSNPKVEVGASSGSVTDITDQVSSCVVNFNVEALED
Ga0196901_11799861	3300022200	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNVEALEDTAFGSTARTNT
Ga0196901_11808091	3300022200	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNVEALEDTAFGSTARTNTAGLQSN
Ga0196901_12255851	3300022200	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYN
Ga0181351_11337831	3300022407	Freshwater Lake	MATSTYLSNSVVEIGASSVSVTDITDQVTAVTVNFVVEALEDTA
Ga0181351_11873491	3300022407	Freshwater Lake	MATSTYLSNPKVEIGASSVSVTNITDNVSACVVNFNVEALEDTAFGSTARTNTAGLQSNSATL
Ga0181351_12224661	3300022407	Freshwater Lake	MATSTYLSNPKVEIGASSVSVTNITDNVSACVVNFN
Ga0210003_12434761	3300024262	Deep Subsurface	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNV
Ga0255215_10290371	3300024278	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYV
Ga0255217_10178781	3300024282	Freshwater	MPTSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGST
Ga0244775_109802593	3300024346	Estuarine	MATSTYLSNPTVTIGTSSATAVDITDQISAVTVNYVVE
Ga0255194_10014625	3300024494	Freshwater	MPTSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTNT
Ga0255187_10489542	3300024510	Freshwater	MATSTYLSNPVVLIGASSASTTDITDQVSAVTVNYVVEALEDTAFGSTARTNTAG
Ga0256299_11293241	3300024533	Freshwater	MATSTYLSSPVVLIGATSASTTDISDQVSACTVNYIVEALEDTAFGSTARTNTA
Ga0255293_10738272	3300024851	Freshwater	MPTSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTART
Ga0208161_11596011	3300025646	Aqueous	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTNTAGL
Ga0208160_11431032	3300025647	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSAVTVNY
Ga0208795_11418152	3300025655	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDT
Ga0208899_11508103	3300025759	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFGSTARTN
Ga0208767_12221151	3300025769	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFGSTARTNTAGLQSNSATL
Ga0208427_11740713	3300025771	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNVEALEDTAFGST
Ga0208644_11471251	3300025889	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFGSTARTNTAGLQS
Ga0208644_11685321	3300025889	Aqueous	MATSTYLSNPKVEVGASSGSVVDITDQVSSCVVNYNVEALEDTAFGS
Ga0255074_10359101	3300027121	Freshwater	MATSTYLSNPTVTIGASSATAVDITDQISAVTVNYIVEALEDTAFGSTARTNTAGLQSN
Ga0255098_10659921	3300027126	Freshwater	MATSTYLSNPKVQVGAAIGSITDITDQVSAATLTVTKEALEDTAFGSTSRTMTA
Ga0255070_10108764	3300027133	Freshwater	MATSTYLSNPVVLIGATSAATTDITDQVSAATLTVTAEALEDTAF
Ga0255073_10199041	3300027135	Freshwater	MATSTYLSNPTVTIGASSATAVDITDQISAVTVNYIVEALEDTAFG
Ga0255065_10076681	3300027142	Freshwater	MATSTYLSNPVVLIGATSAATTDITDQVSAATLTVTAEALED
Ga0255100_10699952	3300027152	Freshwater	MATSTYLSNPTVTIGASSATAVDITDQISAVTVNYIVEALEDTAFGSTARTNTA
Ga0255100_10813072	3300027152	Freshwater	MATSTYLSNPTVLIGATSASTTDITDQVSACTVNYIVEALEDTAFG
Ga0209864_10081783	3300027547	Sand	MATSTYLSSPVVLIGATSASTTDISDQVSACTVNYIVEALEDTAFGSTARTNT
Ga0209552_11080283	3300027563	Freshwater Lake	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALED
Ga0255101_10100024	3300027588	Freshwater	MATSTYLSNPVVLIGATSAATTDITDQVSAATLTVTAEALEDTA
Ga0208942_11202703	3300027627	Freshwater Lentic	MATSTYLSNSKVEIGSSSASVTDITDQVSACTVNFLVEALENTAFGATARTNTGGLQNNSASLTVY
Ga0209357_11123841	3300027656	Freshwater Lake	MATSTYLSNSVVEIGASSVSVTDITDQVTAVTVNFVVEALEDTAFGSTARTNTGGLQNNS
Ga0209500_103155773	3300027782	Freshwater Lake	MATSTYLSNPTVTIGAASGSAVDITDQVSAVTVNYVVEALEDTA
Ga0209353_103177681	3300027798	Freshwater Lake	MATSTYLANSVVEIGPSSASVTDITDQVTAVTVNFVVEALEDTAFGSTARTNTGGLQNNSASITL
Ga0209354_100936381	3300027808	Freshwater Lake	MATSTYLSNPKVEIGASSVSVTNITDNVSACVVNFNVEALEDTAFGSTARTNTAGLQSN
Ga0209354_102232391	3300027808	Freshwater Lake	MATSTYLANSVVEIGASSVSVTDITDQVTAVTVNFVVEALEDTAFGST
Ga0255200_10604901	3300028066	Freshwater	MPTSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEAL
Ga0255214_10179553	3300028258	Freshwater	MATSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTARTNTAGLQSN
Ga0307380_109959152	3300031539	Soil	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNVEALEDTAFGSTARTNTA
Ga0307378_109297473	3300031566	Soil	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNFNVEALEDTAF
Ga0307376_105718741	3300031578	Soil	MSTSTYLSNPKVEVGASSGSVVDITDQVSSCVVNF
Ga0307375_107888221	3300031669	Soil	MATSTYLSNPKVEVGASSGSVVDITDQVTSCVVNF
Ga0315297_114754032	3300031873	Sediment	MATSTYLSNPVVLIGSSSASTTDITDQVSACTVNYIVEALEDTAFGSTAR
Ga0315285_106286751	3300031885	Sediment	MATSTYLSNPVVLIGSSSASTTDISDQVSACTVNYIVEALEDTAFGSTARTNTAGLQSNSATLTLY
Ga0315294_109559341	3300031952	Sediment	MATSTYLSNPVVLIGSSSASTTDISDQVSACTVNYIVEALEDTAFGSTARTNTAGLQSNSATLTLYAS
Ga0315274_115465121	3300031999	Sediment	MATSTYLSNPVVLIGSSSASTTDISDQVSACTVNYIVEALEDTAFGSTARTNTAGLQS
Ga0334998_0305286_1_147	3300034019	Freshwater	MPTSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFGSTA
Ga0335066_0291064_797_925	3300034112	Freshwater	MATSTYLSNPVVLIGATSAATTDITDQVSAATLTVTAEALEDT
Ga0335066_0648031_1_138	3300034112	Freshwater	MPTSTYLSNPVVLIGASSAATTDITDQVSAVTVNYVVEALEDTAFG
Ga0335048_0154718_1133_1309	3300034356	Freshwater	MATSTYLSNPVVLIGATSASTTDITDQVSACTVNYIVEALEDTAFGSTARTNTAGLQSN