Metagenome / Metatranscriptome Family F082518

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082518
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	71 residues
Representative Sequence	MAGIRERLSDALLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR
Number of Associated Samples	98
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.10 %
% of genes near scaffold ends (potentially truncated)	35.40 %
% of genes from short scaffolds (< 2000 bps)	89.38 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.115 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.620 % of family members)
Environment Ontology (ENVO)	Unclassified (51.327 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.912 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.06% β-sheet: 0.00% Coil/Unstructured: 31.94%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF01544	CorA	46.90
PF01220	DHquinase_II	25.66
PF07690	MFS_1	2.65
PF07167	PhaC_N	0.88
PF03466	LysR_substrate	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	46.90
COG0757	3-dehydroquinate dehydratase	Amino acid transport and metabolism [E]	25.66
COG3243	Poly-beta-hydroxybutyrate synthase	Lipid transport and metabolism [I]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	89.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	89.38 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	72.57 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	30.09 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	20.35 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	30.09 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	20.35 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	20.35 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	16.81 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	20.35 %
Geodermatophilaceae bacterium URHB0062	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	15.93 %
Archangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium	0.88 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	20.35 %
Geodermatophilaceae bacterium URHB0062	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	15.93 %
unclassified Archangium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → unclassified Archangium	0.88 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	20.35 %
Geodermatophilaceae bacterium URHB0062	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	15.93 %
Archangium sp. CY-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → unclassified Archangium → Archangium sp. CY-1	0.88 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.88 %
Unclassified	root	N/A	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908016\|OU_2_1_1_newblercontig117377	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300002568\|C688J35102_120710517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1397	Open in IMG/M
3300004153\|Ga0063455_100550731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	735	Open in IMG/M
3300004479\|Ga0062595_100016949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	2626	Open in IMG/M
3300005327\|Ga0070658_11615652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	561	Open in IMG/M
3300005329\|Ga0070683_100385052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1336	Open in IMG/M
3300005329\|Ga0070683_101506569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	647	Open in IMG/M
3300005331\|Ga0070670_100492376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	1089	Open in IMG/M
3300005337\|Ga0070682_100280425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	1214	Open in IMG/M
3300005344\|Ga0070661_101397139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	589	Open in IMG/M
3300005347\|Ga0070668_101328778	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005356\|Ga0070674_101663477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300005367\|Ga0070667_100734188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	915	Open in IMG/M
3300005367\|Ga0070667_101836103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	570	Open in IMG/M
3300005436\|Ga0070713_100195342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1825	Open in IMG/M
3300005456\|Ga0070678_101336690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	668	Open in IMG/M
3300005466\|Ga0070685_10392897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	959	Open in IMG/M
3300005530\|Ga0070679_100434499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	1258	Open in IMG/M
3300005543\|Ga0070672_101567257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	591	Open in IMG/M
3300005544\|Ga0070686_101170631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	638	Open in IMG/M
3300005547\|Ga0070693_100181699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1354	Open in IMG/M
3300005547\|Ga0070693_100243177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	1190	Open in IMG/M
3300005548\|Ga0070665_101915975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	598	Open in IMG/M
3300005577\|Ga0068857_101074122	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300005617\|Ga0068859_100897704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	971	Open in IMG/M
3300005618\|Ga0068864_100436949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1249	Open in IMG/M
3300005718\|Ga0068866_10106300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	1557	Open in IMG/M
3300005718\|Ga0068866_10565250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	763	Open in IMG/M
3300005719\|Ga0068861_100022874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	4506	Open in IMG/M
3300005842\|Ga0068858_100795645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	922	Open in IMG/M
3300006028\|Ga0070717_10385870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1256	Open in IMG/M
3300006028\|Ga0070717_12126844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	505	Open in IMG/M
3300006755\|Ga0079222_10016334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	2861	Open in IMG/M
3300006755\|Ga0079222_10885451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	746	Open in IMG/M
3300006755\|Ga0079222_11463940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	637	Open in IMG/M
3300006804\|Ga0079221_10577888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	751	Open in IMG/M
3300006881\|Ga0068865_101475943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	609	Open in IMG/M
3300009011\|Ga0105251_10150295	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300009094\|Ga0111539_10252472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2053	Open in IMG/M
3300009101\|Ga0105247_10967240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	662	Open in IMG/M
3300009148\|Ga0105243_10257212	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300009156\|Ga0111538_11258309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	935	Open in IMG/M
3300009176\|Ga0105242_11139493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	796	Open in IMG/M
3300009553\|Ga0105249_10631177	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300010044\|Ga0126310_10344738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1042	Open in IMG/M
3300010371\|Ga0134125_10742531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1081	Open in IMG/M
3300012212\|Ga0150985_105727423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1555	Open in IMG/M
3300012212\|Ga0150985_111429285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1052	Open in IMG/M
3300012469\|Ga0150984_123140258	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300012891\|Ga0157305_10170425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602	Open in IMG/M
3300012984\|Ga0164309_11345283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300012985\|Ga0164308_10029162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3340	Open in IMG/M
3300012986\|Ga0164304_11374963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300012988\|Ga0164306_10463165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	967	Open in IMG/M
3300013100\|Ga0157373_10249181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1256	Open in IMG/M
3300013102\|Ga0157371_10053501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2867	Open in IMG/M
3300013105\|Ga0157369_10128894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2681	Open in IMG/M
3300013296\|Ga0157374_10425656	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300013297\|Ga0157378_10559332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1150	Open in IMG/M
3300013297\|Ga0157378_10803697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	966	Open in IMG/M
3300013306\|Ga0163162_10043909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	4475	Open in IMG/M
3300014745\|Ga0157377_11426699	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Archangium → unclassified Archangium → Archangium sp. CY-1	547	Open in IMG/M
3300014969\|Ga0157376_12431768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	563	Open in IMG/M
3300017965\|Ga0190266_10153591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1038	Open in IMG/M
3300020078\|Ga0206352_10680236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	559	Open in IMG/M
3300020080\|Ga0206350_10981013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	609	Open in IMG/M
3300021445\|Ga0182009_10296299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	814	Open in IMG/M
3300025321\|Ga0207656_10298322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	797	Open in IMG/M
3300025899\|Ga0207642_10053266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1840	Open in IMG/M
3300025904\|Ga0207647_10372491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	807	Open in IMG/M
3300025908\|Ga0207643_10020478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	3630	Open in IMG/M
3300025909\|Ga0207705_10410763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1047	Open in IMG/M
3300025909\|Ga0207705_11514449	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300025919\|Ga0207657_10704530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	784	Open in IMG/M
3300025924\|Ga0207694_10273082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1387	Open in IMG/M
3300025928\|Ga0207700_10438223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1150	Open in IMG/M
3300025934\|Ga0207686_10857478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	731	Open in IMG/M
3300025937\|Ga0207669_11035845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	691	Open in IMG/M
3300025944\|Ga0207661_10758832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	893	Open in IMG/M
3300025949\|Ga0207667_10887904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	884	Open in IMG/M
3300025961\|Ga0207712_10694190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	888	Open in IMG/M
3300025981\|Ga0207640_10197168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1523	Open in IMG/M
3300025981\|Ga0207640_11834603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	548	Open in IMG/M
3300026035\|Ga0207703_10193623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1803	Open in IMG/M
3300026067\|Ga0207678_10389494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1205	Open in IMG/M
3300026075\|Ga0207708_10023074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4700	Open in IMG/M
3300026095\|Ga0207676_10209228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1729	Open in IMG/M
3300026116\|Ga0207674_10687999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	987	Open in IMG/M
3300026116\|Ga0207674_11032118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	791	Open in IMG/M
3300026118\|Ga0207675_100015884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7021	Open in IMG/M
3300026121\|Ga0207683_10462928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1169	Open in IMG/M
3300027787\|Ga0209074_10022180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1727	Open in IMG/M
3300027787\|Ga0209074_10152568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	832	Open in IMG/M
3300027809\|Ga0209574_10060062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	992	Open in IMG/M
3300028379\|Ga0268266_10362549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	1364	Open in IMG/M
3300028380\|Ga0268265_10582372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1067	Open in IMG/M
3300028381\|Ga0268264_11676164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	646	Open in IMG/M
3300028587\|Ga0247828_10123272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1262	Open in IMG/M
3300028587\|Ga0247828_10207134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1026	Open in IMG/M
3300028592\|Ga0247822_10049118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2944	Open in IMG/M
3300028597\|Ga0247820_11211503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	545	Open in IMG/M
3300028704\|Ga0307321_1115066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	554	Open in IMG/M
3300028708\|Ga0307295_10042441	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300028709\|Ga0307279_10060253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	639	Open in IMG/M
3300028714\|Ga0307309_10061167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	839	Open in IMG/M
3300028809\|Ga0247824_11061855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	515	Open in IMG/M
3300030336\|Ga0247826_10523649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	899	Open in IMG/M
3300030336\|Ga0247826_11312131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	583	Open in IMG/M
3300031093\|Ga0308197_10014605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1593	Open in IMG/M
3300032013\|Ga0310906_10400888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	906	Open in IMG/M
3300032080\|Ga0326721_10382538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	810	Open in IMG/M
3300033550\|Ga0247829_11583478	Not Available	540	Open in IMG/M
3300033551\|Ga0247830_10556721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	905	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	54.87%
Environmental	Environmental	45.13%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	54.87%
Terrestrial	Environmental → Terrestrial	44.25%
Unclassified	Environmental → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.89%
Unclassified	Environmental → Unclassified → Unclassified	0.89%
Phylloplane	Host-Associated → Plants → Phylloplane	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	20.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.93%
Loam	Environmental → Terrestrial → Soil → Loam	14.16%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.77%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.77%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	20.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.39%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.19%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.77%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.31%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_02350870	2124908016		MAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLAGR
C688J35102_1207105172	3300002568	Soil	MAVIRERLSDALLRFGTEAAMDRVALERSLATAPDARGSHDALGALEVARWFDAAVLWVGWRLRPRHLLAHR*
Ga0063455_1005507311	3300004153	Soil	MAVIRERLSDALLRFGTEAAMDRVALERSLATAPDARGSHDALGALEVARWFDAAVLWVGWRLRPRHLL
Ga0062595_1000169495	3300004479	Soil	MAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLAGR*
Ga0070658_116156521	3300005327	Corn Rhizosphere	VGAVVGIRARLSDALLKFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0070683_1003850522	3300005329	Corn Rhizosphere	MVGIRERLSAALLRFGTEAAMDRVALERTLAAAPDARGSRDALGALEVARWFDTAVLWVGWRLQPRHLVAHR*
Ga0070683_1015065692	3300005329	Corn Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVTLERSLAAVPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLAGR*
Ga0070670_1004923762	3300005331	Switchgrass Rhizosphere	MVGIRERLSAALLRFGTEAAMDRVALERTLAAAPDARGSRDALGALEVARWFDTAILWVGWRLQPRHLVAHR*
Ga0070682_1002804254	3300005337	Corn Rhizosphere	MVGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDTAILWVGWRLQPRHLVAHR*
Ga0070661_1013971392	3300005344	Corn Rhizosphere	TVGAVVGIRERLSDALLKFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0070668_1013287781	3300005347	Switchgrass Rhizosphere	FGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0070674_1016634771	3300005356	Miscanthus Rhizosphere	FGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLLAGR*
Ga0070667_1007341881	3300005367	Switchgrass Rhizosphere	VGAVVGIRERLSDALLKFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0070667_1018361032	3300005367	Switchgrass Rhizosphere	VSPRTVGAMAALRERLSEALLRFGTEAAMDRVSIQRSLATTQGARGGQEALGAMEVARWVDAAVLWMGWRLRPRHLIAPR*
Ga0070713_1001953422	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAAIRERLSEALLRFGTEAAMDRVLVQRSLAAAHGARGSQEALGAMEVARWVDGAVLWIGWRLRPRHGIVHQ*
Ga0070678_1013366901	3300005456	Miscanthus Rhizosphere	MDGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSLDALSALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0070685_103928972	3300005466	Switchgrass Rhizosphere	MDGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDAGDALSALEVARWFDAAVLWVGW
Ga0070679_1004344991	3300005530	Corn Rhizosphere	LLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0070672_1015672572	3300005543	Miscanthus Rhizosphere	MVGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0070686_1011706311	3300005544	Switchgrass Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0070693_1001816995	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	EARRTVGAVVGIRERLSDALLKFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDTAILWVGWRLQPRHLVAHR*
Ga0070693_1002431772	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAGIRERVSDALLRFGTEAAMDRVALERSLAAAPDARGNDALGALEVARWFDAAVLWV
Ga0070665_1019159752	3300005548	Switchgrass Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVALERSLAAAPDARGNDALGALEVARWFDAAVLWVG
Ga0068857_1010741223	3300005577	Corn Rhizosphere	MVGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWAGWRLRPRHLVAHR*
Ga0068859_1008977044	3300005617	Switchgrass Rhizosphere	MVGIRERLSAALLKFGTEAAIDRVALQRSLAAAPDARGSLDALSALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0068864_1004369494	3300005618	Switchgrass Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVALERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLAGR*
Ga0068866_101063005	3300005718	Miscanthus Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLADG*
Ga0068866_105652504	3300005718	Miscanthus Rhizosphere	LSDALLKFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0068861_1000228743	3300005719	Switchgrass Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALELARWFDAAVLWVGWRLRPRHLLADR*
Ga0068858_1007956451	3300005842	Switchgrass Rhizosphere	MVGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSRDALSALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0070717_103858705	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	IRERLSEALLRFGTEAAMDRVLVQRSLAAAHGARGSQEALGAMEVARWVDGAVLWIGWRLRPRHGIVHQ*
Ga0070717_121268442	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0079222_100163343	3300006755	Agricultural Soil	MDGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDAGDALSALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0079222_108854512	3300006755	Agricultural Soil	VPGLARYRGVVAAIREHLSGALLKFGTEAAMDRLTLQRSLAAASDTRSSGDALGALEAARWFEAAVLWVGWRLQPRHL
Ga0079222_114639402	3300006755	Agricultural Soil	MAGIRERLSDALLRFGTEAAMDRVALERSLAAAPDARGDDALGALEVARWFDAAVLWVGWRLRPRHLLADR*
Ga0079221_105778882	3300006804	Agricultural Soil	VAAIRERLSGALLKFGTDAAVDRLTLQRSLAAASDDQSCGDALGALEAARWFEAAVLWVGWRLKPRHLLGPR*
Ga0068865_1014759432	3300006881	Miscanthus Rhizosphere	MVGIRERLSAALLKFGTEAAIDRVALQRSLAAAPDARGSGDALSALEVARWFDAAVLWVGWRLQPRHLVAHR*
Ga0105251_101502951	3300009011	Switchgrass Rhizosphere	MDGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWAGWRLRPRHLVAHR*
Ga0111539_102524725	3300009094	Populus Rhizosphere	MAGIRERVSDALLRFGTEAAMDRVALERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLADG*
Ga0105247_109672403	3300009101	Switchgrass Rhizosphere	LLRFGTEAAMDRVALQRSLAAAPDARGSLDALSALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0105243_102572123	3300009148	Miscanthus Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLADR*
Ga0111538_112583094	3300009156	Populus Rhizosphere	GIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSLDALSALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0105242_111394934	3300009176	Miscanthus Rhizosphere	VGIRERLSDALLKFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0105249_106311771	3300009553	Switchgrass Rhizosphere	VGAVVGIRERLSDALLKFGTEAAMDRVALQRSLAAAPDARGSRDALSALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0126310_103447381	3300010044	Serpentine Soil	MAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLVDR*
Ga0134125_107425312	3300010371	Terrestrial Soil	MAGIRERLSDALLRFGTEAAMDRVALERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLADG*
Ga0150985_1057274232	3300012212	Avena Fatua Rhizosphere	MAAIRERLSEALLRFGTEAAMDRALLQRSLAAAHGTRGSQEALGAMEVARWVDAAVLWMGWRLRPRHLIAPR*
Ga0150985_1114292852	3300012212	Avena Fatua Rhizosphere	MAGIRERLSDALLRFGTEAAMDRMTLQRSLAAAPDARGSDALGALEVARWFDAAVLWVGWRLRPRHLLANG*
Ga0150984_1231402582	3300012469	Avena Fatua Rhizosphere	MAGIRERLSDALLRFGTEAAMDRMTLQRSLAAAPDDRGSDALSALEVARWFDAAVLWVGWRLRPRHLLANG*
Ga0157305_101704252	3300012891	Soil	MAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHL
Ga0164309_113452831	3300012984	Soil	MVGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLV
Ga0164308_100291624	3300012985	Soil	VGAVVGIRERLSEALLKFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0164304_113749632	3300012986	Soil	GAMAALRERLSEALLRFGTEAAMDRVSIQRSLATTQGARGGQEALGAMEVARWVDAAVLWMGWRLRPRHLIAPR*
Ga0164306_104631654	3300012988	Soil	MAGIRERVSDALLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0157373_102491812	3300013100	Corn Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVALERTLAAAPDARGSRDALGALEVARWFDTAILWVGWRLQPRHLVAHR*
Ga0157371_100535012	3300013102	Corn Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDGRGNDALGALEVARWFDAAVLWVGWRLRPRHLLAGR*
Ga0157369_101288943	3300013105	Corn Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVTLERSLAAVPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLADG*
Ga0157374_104256561	3300013296	Miscanthus Rhizosphere	MDGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLQPRHLVAHR*
Ga0157378_105593322	3300013297	Miscanthus Rhizosphere	MVGIRERLSAALLRFGTEAAMDRVALERTLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLLADG*
Ga0157378_108036971	3300013297	Miscanthus Rhizosphere	RLSDALLRFGTEAAMDRVALERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0163162_100439093	3300013306	Switchgrass Rhizosphere	MAGIRERLSYALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLAGR*
Ga0157377_114266992	3300014745	Miscanthus Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVALERSLAAAPDARGNDALGALELARSFDAAVLWVGWRRRPRHLLPER*
Ga0157376_124317681	3300014969	Miscanthus Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR*
Ga0190266_101535914	3300017965	Soil	MVGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR
Ga0206352_106802362	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	VGAVVGIRERLSDALLKFGTEAAMDRVALQRSLAAAPDARGSLDALSALEVARWFDAAVLWVGWRLRPRHLVAHR
Ga0206350_109810131	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVG
Ga0182009_102962992	3300021445	Soil	MVGIRERLSAALLRFGTEAAMDRVALERRLAAAPDGRGSRDALGALEVARWFDAAVLWVGWRLRPRHLLAHR
Ga0207656_102983223	3300025321	Corn Rhizosphere	VGAVVGIRERLSDALLKFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR
Ga0207642_100532663	3300025899	Miscanthus Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLADG
Ga0207647_103724912	3300025904	Corn Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLADR
Ga0207643_100204782	3300025908	Miscanthus Rhizosphere	MDGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSLDALSALEVARWFDAAVLWVGWRLRPRHLVAHR
Ga0207705_104107634	3300025909	Corn Rhizosphere	GIRARLSDALLKFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR
Ga0207705_115144492	3300025909	Corn Rhizosphere	MVGIRERLSAALLRFGTEAAMDRVALERTLAAAPDARGSRDALGALEVARWFDTAILWVGWRLQPRHLVAHR
Ga0207657_107045301	3300025919	Corn Rhizosphere	GPAARGGGEARRTVGAMVGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR
Ga0207694_102730822	3300025924	Corn Rhizosphere	VGAVVGIRARLSDALLKFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR
Ga0207700_104382233	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VSPRTVGAMAAIRERLSEALLRFGTEAAMDRAALQRSLAAAHGARGSQEALGAMEVARWVDGAVLWIGWRLRPRHGIVHQ
Ga0207686_108574783	3300025934	Miscanthus Rhizosphere	VGIRERLSDALLKFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR
Ga0207669_110358453	3300025937	Miscanthus Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVALERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLAGR
Ga0207661_107588321	3300025944	Corn Rhizosphere	MVGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSLDALSALEVARWFDAAVLWVGWRLRPRHLVAHR
Ga0207667_108879041	3300025949	Corn Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRH
Ga0207712_106941904	3300025961	Switchgrass Rhizosphere	RERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLAGR
Ga0207640_101971682	3300025981	Corn Rhizosphere	VGAVVGIRERLSDALLKFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDTAILWVGWRLQPRHLVAHR
Ga0207640_118346031	3300025981	Corn Rhizosphere	ARRTVDVMAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLAGR
Ga0207703_101936232	3300026035	Switchgrass Rhizosphere	VGAVVGIRARLSDALLKFGTEAAMDRVALQRSLAAAPDARGSLDALSALEVARWFDAAVLWVGWRLRPRHLVAHR
Ga0207678_103894944	3300026067	Corn Rhizosphere	MDGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR
Ga0207708_100230741	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRL
Ga0207676_102092285	3300026095	Switchgrass Rhizosphere	GAMDGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR
Ga0207674_106879992	3300026116	Corn Rhizosphere	MVGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSRDALSALEVARWFDAAVLWVGWRLRPRHLVAHR
Ga0207674_110321181	3300026116	Corn Rhizosphere	LSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLAGR
Ga0207675_1000158846	3300026118	Switchgrass Rhizosphere	MAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALELARWFDAAVLWVGWRLRPRHLLADR
Ga0207683_104629281	3300026121	Miscanthus Rhizosphere	MAGIRERVSDALLRFGTEAAMDRVALERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLAGR
Ga0209074_100221803	3300027787	Agricultural Soil	MDGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDAGDALSALELARWFDAAVLWVGWRLRPRHLVAHR
Ga0209074_101525682	3300027787	Agricultural Soil	MAGIRERLSDALLRFGTEAAMDRVALERSLAAAPDARGDDALGALEVARWFDAAVLWVGWRLRPRHLLADR
Ga0209574_100600621	3300027809	Agave	MAGIRERLSDALLRFGTDAAMDRVTLQRSLAAAPDARGSDALGALEVARWFDAAVLWVGWRLRP
Ga0268266_103625492	3300028379	Switchgrass Rhizosphere	VSPRTVGAMAALRERLSEALLRFGTEAAMDRVSIQRSLATTQGARGGQEALGAMEVARWVDAAVLWMGWRLRPRHLIAPR
Ga0268265_105823722	3300028380	Switchgrass Rhizosphere	MVGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDTAVLWVGWRLRPRHLVAHR
Ga0268264_116761641	3300028381	Switchgrass Rhizosphere	TVDVMAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLAGR
Ga0247828_101232722	3300028587	Soil	MVGIRERLSAALLTFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR
Ga0247828_102071341	3300028587	Soil	ERVSDALLRFGTEAAMDRVALERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLADG
Ga0247822_100491185	3300028592	Soil	MAGIRERVSDALLRFGTEAAMDRVALERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLADG
Ga0247820_112115032	3300028597	Soil	LLRFGTEAAMDRVALERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLADG
Ga0307321_11150663	3300028704	Soil	LRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLANR
Ga0307295_100424412	3300028708	Soil	VDVMAGIRERLSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLADR
Ga0307279_100602531	3300028709	Soil	MVGIRERLSEALLRFGTEAAMDRVTLQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLLVHR
Ga0307309_100611671	3300028714	Soil	LSDALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRPRHLLADR
Ga0247824_110618551	3300028809	Soil	LLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAH
Ga0247826_105236492	3300030336	Soil	MVGIRERLSAALLRFGTEAAMDRVALQRSLAAAPDARGNDALGALEVARWFDAAVLWVGWRLRSRHLLADR
Ga0247826_113121311	3300030336	Soil	SAALLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR
Ga0308197_100146051	3300031093	Soil	AIRERLSEALLRFGTEAAMDRALLQRSLATARGGRGIQEALGAMEVARWVDAAVLWMGWRLRPRHLIAPR
Ga0310906_104008884	3300032013	Soil	GPAGRGGGEARRTVDVMAGIRERVSDALLRFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR
Ga0326721_103825382	3300032080	Soil	MAGIRKRLSAALLRFGTEAAMDRVTLERSLAAAPDARGNDALGALEVARWFEAAVLWVGWRLRPRHLLADR
Ga0247829_115834781	3300033550	Soil	MAAICERLSEALLRFGTEAAMDRVSLQRSLATAPGARGSQEALGAMEVARWVDAAALWMGWRLRPRHLIAPR
Ga0247830_105567214	3300033551	Soil	ARRTVGAMVGIRERLSAALLTFGTEAAMDRVALQRSLAAAPDARGSRDALGALEVARWFDAAVLWVGWRLRPRHLVAHR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082518

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences