Metagenome / Metatranscriptome Family F082501

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082501
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	136 residues
Representative Sequence	MRRAFGARAIWGVALAGLAVVGGCSSGQQPRKPTSEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR
Number of Associated Samples	98
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.43 %
% of genes near scaffold ends (potentially truncated)	31.86 %
% of genes from short scaffolds (< 2000 bps)	82.30 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.115 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (9.735 % of family members)
Environment Ontology (ENVO)	Unclassified (50.442 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.717 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 30.54% Coil/Unstructured: 69.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13489	Methyltransf_23	14.16
PF08242	Methyltransf_12	12.39
PF13345	Obsolete Pfam Family	7.08
PF13349	DUF4097	5.31
PF12847	Methyltransf_18	3.54
PF13847	Methyltransf_31	1.77
PF08241	Methyltransf_11	0.88
PF02870	Methyltransf_1N	0.88
PF04389	Peptidase_M28	0.88
PF01035	DNA_binding_1	0.88
PF07394	DUF1501	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	1.77
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	75.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	75.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	37.17 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	26.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	37.17 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	26.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	37.17 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	26.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	37.17 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	14.16 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	12.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	37.17 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	14.16 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	12.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001991\|JGI24743J22301_10076939	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	701	Open in IMG/M
3300004114\|Ga0062593_100695789	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	990	Open in IMG/M
3300004463\|Ga0063356_100124674	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2869	Open in IMG/M
3300004463\|Ga0063356_100432037	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1709	Open in IMG/M
3300004463\|Ga0063356_100603582	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1484	Open in IMG/M
3300005288\|Ga0065714_10440340	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	561	Open in IMG/M
3300005290\|Ga0065712_10099863	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300005293\|Ga0065715_10871577	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	581	Open in IMG/M
3300005328\|Ga0070676_10182296	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300005328\|Ga0070676_10326661	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1048	Open in IMG/M
3300005329\|Ga0070683_100031766	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4804	Open in IMG/M
3300005331\|Ga0070670_100567466	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300005333\|Ga0070677_10024729	All Organisms → cellular organisms → Bacteria	2237	Open in IMG/M
3300005337\|Ga0070682_100356148	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300005338\|Ga0068868_100119804	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2146	Open in IMG/M
3300005344\|Ga0070661_100137455	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1840	Open in IMG/M
3300005347\|Ga0070668_100875046	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005353\|Ga0070669_100003647	All Organisms → cellular organisms → Bacteria	11102	Open in IMG/M
3300005353\|Ga0070669_100487700	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1021	Open in IMG/M
3300005354\|Ga0070675_100575747	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300005355\|Ga0070671_100013222	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6649	Open in IMG/M
3300005356\|Ga0070674_100322684	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1239	Open in IMG/M
3300005364\|Ga0070673_100654881	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	962	Open in IMG/M
3300005456\|Ga0070678_100154022	All Organisms → cellular organisms → Bacteria	1855	Open in IMG/M
3300005456\|Ga0070678_100529315	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300005457\|Ga0070662_100912341	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300005564\|Ga0070664_100059894	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3240	Open in IMG/M
3300005564\|Ga0070664_100679817	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300005577\|Ga0068857_102508678	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	506	Open in IMG/M
3300005616\|Ga0068852_100385370	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300005718\|Ga0068866_10533436	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005843\|Ga0068860_100289960	All Organisms → cellular organisms → Bacteria	1601	Open in IMG/M
3300006031\|Ga0066651_10056266	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300006046\|Ga0066652_100006505	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7035	Open in IMG/M
3300006755\|Ga0079222_12295012	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	538	Open in IMG/M
3300006844\|Ga0075428_101025237	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300006853\|Ga0075420_100421691	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300006876\|Ga0079217_10139234	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1157	Open in IMG/M
3300006918\|Ga0079216_11687070	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300007004\|Ga0079218_10034611	All Organisms → cellular organisms → Bacteria	2973	Open in IMG/M
3300009094\|Ga0111539_11641652	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	745	Open in IMG/M
3300009100\|Ga0075418_11544047	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	721	Open in IMG/M
3300009156\|Ga0111538_10236132	All Organisms → cellular organisms → Bacteria	2316	Open in IMG/M
3300009174\|Ga0105241_12225189	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	544	Open in IMG/M
3300009176\|Ga0105242_11651459	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	676	Open in IMG/M
3300009177\|Ga0105248_12128710	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	638	Open in IMG/M
3300009177\|Ga0105248_12273965	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	617	Open in IMG/M
3300009553\|Ga0105249_10786019	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1015	Open in IMG/M
3300009789\|Ga0126307_10026921	All Organisms → cellular organisms → Bacteria → Proteobacteria	4401	Open in IMG/M
3300009789\|Ga0126307_10206279	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1577	Open in IMG/M
3300009789\|Ga0126307_10346545	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1196	Open in IMG/M
3300009840\|Ga0126313_10428393	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1052	Open in IMG/M
3300010039\|Ga0126309_10147346	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1262	Open in IMG/M
3300010166\|Ga0126306_10986804	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	686	Open in IMG/M
3300011119\|Ga0105246_10902627	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	792	Open in IMG/M
3300011423\|Ga0137436_1171094	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	576	Open in IMG/M
3300012212\|Ga0150985_100405763	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1142	Open in IMG/M
3300012212\|Ga0150985_111936796	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	757	Open in IMG/M
3300012469\|Ga0150984_104407564	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	601	Open in IMG/M
3300012907\|Ga0157283_10097230	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	782	Open in IMG/M
3300012910\|Ga0157308_10457869	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	509	Open in IMG/M
3300012913\|Ga0157298_10042425	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1005	Open in IMG/M
3300012914\|Ga0157297_10174150	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	722	Open in IMG/M
3300013100\|Ga0157373_11114176	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	592	Open in IMG/M
3300013296\|Ga0157374_12316644	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	564	Open in IMG/M
3300014326\|Ga0157380_11133271	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	823	Open in IMG/M
3300014745\|Ga0157377_10842438	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	680	Open in IMG/M
3300018465\|Ga0190269_11546343	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	549	Open in IMG/M
3300018476\|Ga0190274_10454782	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1263	Open in IMG/M
3300018476\|Ga0190274_11494237	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	767	Open in IMG/M
3300022756\|Ga0222622_10004055	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6425	Open in IMG/M
3300022756\|Ga0222622_10404865	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	961	Open in IMG/M
3300025315\|Ga0207697_10031935	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2154	Open in IMG/M
3300025907\|Ga0207645_10188424	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1355	Open in IMG/M
3300025911\|Ga0207654_11178158	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	558	Open in IMG/M
3300025920\|Ga0207649_10902733	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	693	Open in IMG/M
3300025923\|Ga0207681_10031244	All Organisms → cellular organisms → Bacteria	3477	Open in IMG/M
3300025925\|Ga0207650_10047569	All Organisms → cellular organisms → Bacteria	3161	Open in IMG/M
3300025926\|Ga0207659_10469521	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1062	Open in IMG/M
3300025931\|Ga0207644_10124191	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1968	Open in IMG/M
3300025933\|Ga0207706_10150544	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2046	Open in IMG/M
3300025936\|Ga0207670_10467497	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1019	Open in IMG/M
3300025937\|Ga0207669_10320538	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1186	Open in IMG/M
3300025944\|Ga0207661_10308005	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1421	Open in IMG/M
3300025960\|Ga0207651_10369901	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1212	Open in IMG/M
3300026035\|Ga0207703_10688672	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	971	Open in IMG/M
3300026089\|Ga0207648_10614262	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1003	Open in IMG/M
3300026121\|Ga0207683_10161517	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2026	Open in IMG/M
3300026142\|Ga0207698_10412387	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1294	Open in IMG/M
3300026306\|Ga0209468_1102248	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	916	Open in IMG/M
3300028379\|Ga0268266_11005287	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	807	Open in IMG/M
3300028380\|Ga0268265_11757383	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	626	Open in IMG/M
3300030496\|Ga0268240_10007189	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300030496\|Ga0268240_10123756	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	621	Open in IMG/M
3300030988\|Ga0308183_1045454	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	863	Open in IMG/M
3300031058\|Ga0308189_10470350	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	536	Open in IMG/M
3300031548\|Ga0307408_100141289	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300031716\|Ga0310813_12407046	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	500	Open in IMG/M
3300031824\|Ga0307413_10177067	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300031901\|Ga0307406_10435275	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1048	Open in IMG/M
3300031903\|Ga0307407_11129702	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	610	Open in IMG/M
3300031911\|Ga0307412_11453328	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	622	Open in IMG/M
3300031938\|Ga0308175_100341706	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1543	Open in IMG/M
3300031938\|Ga0308175_100359152	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1508	Open in IMG/M
3300031939\|Ga0308174_10089818	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2180	Open in IMG/M
3300031939\|Ga0308174_10382379	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1130	Open in IMG/M
3300031943\|Ga0310885_10332885	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	793	Open in IMG/M
3300032012\|Ga0310902_10957271	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	592	Open in IMG/M
3300032074\|Ga0308173_10509402	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1079	Open in IMG/M
3300032075\|Ga0310890_11166209	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	626	Open in IMG/M
3300032126\|Ga0307415_102385419	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	520	Open in IMG/M
3300033550\|Ga0247829_10387719	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1147	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	62.83%
Environmental	Environmental	37.17%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	62.83%
Terrestrial	Environmental → Terrestrial	34.51%
Aquatic	Environmental → Aquatic	2.65%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	43.36%
Soil	Environmental → Terrestrial → Soil	34.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.47%
Sediment	Environmental → Aquatic → Sediment	2.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	23.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.42%
Loam	Environmental → Terrestrial → Soil → Loam	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.65%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.65%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	23.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.39%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.65%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	9.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	7.08%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.65%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24743J22301_100769392	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	QQPRKPTNEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0062593_1006957891	3300004114	Soil	GGCASGQKQPSTNDPAAGTIDLNTGRRVSGNSDKTTVVVDNQNLNEMTIYAYQGTQRLRLGKVRANATTQLVIPSSMIGGVVQMRFYAEPLATGGQRAYLSELIPVQPGDQVDFLIPFTR
Ga0063356_1001246742	3300004463	Arabidopsis Thaliana Rhizosphere	MRSSSERRVSSGHGTTGARAIWTVAVAVLAIAGGCATGQKTSKEPTPEAVDLNSGTRRSDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELRIPSSIVSGVVQMRFYAEPMVTGGQRAYLSEMIPVQPGDQVDFLIPFTR*
Ga0063356_1004320371	3300004463	Arabidopsis Thaliana Rhizosphere	MRNSKGWASLVLGSIDARAIWGIALAGLAVVGGCASGQKQPVPAPASGTVDLNSGGRVSDKTTVVVDNQNLNEMTIYAYQGTQRLRLGRVRGSATTELQIPTSIVSGPVQMRFYAEPMVTGGQRSYLSEMIPVQPGDQIDFLIPFTR*
Ga0063356_1006035823	3300004463	Arabidopsis Thaliana Rhizosphere	MRNSKGWASLVLCSIDARAIWGIALAGLAVVGGCASGQKQPVPASAPGAVDLNSSGGRPSDKTTVVVDNQNLNEMTIYAYQGTQRLRLGRVRGSATTELKIPTSIVSGLVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR*
Ga0065714_104403401	3300005288	Miscanthus Rhizosphere	MRRSREWASSMRRTFGARAIWGVALAGLAVVGGCSSGQQPRKPTNEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0065712_100998631	3300005290	Miscanthus Rhizosphere	MRRAFGARAIWGVALAGLAVVGGCSSGQQPRKPTNEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0065715_108715771	3300005293	Miscanthus Rhizosphere	RAFGARAIWGVALAGLAVVGGCSSGQQPRKPTNEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0070676_101822963	3300005328	Miscanthus Rhizosphere	MRNSKGWAALVLGSIDARAIWGISLAGLAVVGGCGGGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATATTELKIPNSIVSGPVQMRFYAEPMVT
Ga0070676_103266611	3300005328	Miscanthus Rhizosphere	GQKQPVPASAPGAVDLNSSGGRPSDKTTVVVDNQNLNEMTIYAYQGTQRLRLGRVRGSATTELKIPTSIVSGLVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR*
Ga0070683_1000317664	3300005329	Corn Rhizosphere	MLGAFGARAIWGIALAGLAAVGGCTSGRQGQKPSSEPTSGVVDLNGNRSSGKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASSTTELQIPSSLISGLVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0070670_1005674662	3300005331	Switchgrass Rhizosphere	MRRSREWASSMRRAFGARAIWGVALAGLAVVGGCSSGQQPRKPTSEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0070677_100247292	3300005333	Miscanthus Rhizosphere	MRNSKGWAALVLGSIDARAIWGISLAGLAVVGGCGGGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATATTELKIPNSIVSGPVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR*
Ga0070682_1003561482	3300005337	Corn Rhizosphere	MLGAFGARAIWGVALAGLAVVGGCSSGQQPRKPTNEPTTGTVDLNSGRTLNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0068868_1001198043	3300005338	Miscanthus Rhizosphere	MRRSREWASSMRRAFGARAIWGVALAGLAVVGGCSSGQQPRKPTNEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0070661_1001374551	3300005344	Corn Rhizosphere	MRRSGEWASSMLGAFGARAIWGVALAGLAVVGGCSSGQQPRKPTNEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0070668_1008750461	3300005347	Switchgrass Rhizosphere	MRRAIGARAIWGVALAGLAVVGGCSSGQQPRKPTSEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATATTELKIPNSIVSGPVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR*
Ga0070669_1000036471	3300005353	Switchgrass Rhizosphere	MRRTFGARAIWGVALAGLAVVGGCSSGQQPRKPTNEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0070669_1004877001	3300005353	Switchgrass Rhizosphere	MGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATATTELKIPNSIVSGPVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR*
Ga0070675_1005757471	3300005354	Miscanthus Rhizosphere	MLGAFGARAIWGVALAGLAVVIGCASGRQGQKPSSEATSGAVDLNGNRGSGKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASSTTELQIPSSLISGLVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0070671_1000132224	3300005355	Switchgrass Rhizosphere	MRRAFGARAIWGVALAGLAVVGGCSSGQQPRKPTSEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0070674_1003226842	3300005356	Miscanthus Rhizosphere	MRSSKGWASLALGSIDARAIWGMALAGLAVVGGCGGGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATATTELKIPNSIVSGPVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR*
Ga0070673_1006548811	3300005364	Switchgrass Rhizosphere	AFGARAIWGVALAGLAVVIGCASGRQGQKPSSEATSGAVDLNGNRGSGKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASSTTELQIPSSLISGLVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0070678_1001540223	3300005456	Miscanthus Rhizosphere	MALAGLAVVGGCGGGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATATTELKIPNSIVSGPVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR*
Ga0070678_1005293152	3300005456	Miscanthus Rhizosphere	MLGAFGARAIWGVALAGLAVVIGCASGRQGQKPSSEATSGAVDLNGNRGSGKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASSTTELQIPSSLISGLVQIRFYAEPMVTGGQRAYISEMIPVQP
Ga0070662_1009123411	3300005457	Corn Rhizosphere	MRRSREWASSMRRAIGARAIWGVALAGLAVVGGCSSGQQPRKPTSEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0070664_1000598944	3300005564	Corn Rhizosphere	MRSSNERASSVRGAVGPRAIWAIALAGLAIVGGCASGQKQPSTNDPAAGTIDLNTGRRVSGNSDKTTVVVDNQNLNEMTIYAYQGTQRLRLGKVRANATTQLVIPSSMIGGVVQMRFYAEPLATGGQRAYLSELIPVQPGDQVDFLIPFTR*
Ga0070664_1006798172	3300005564	Corn Rhizosphere	MRNSRGWASLALGSIDARAIWGMALAGLAVAGGCGGGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRVRATATTELKIPNSMVSGPVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR*
Ga0068857_1025086781	3300005577	Corn Rhizosphere	MRSSNEGASSVRRAIGSRAIWAIALAGLTAVGGCASGRKDPPATDASGPVDLNTGRRVSKNGDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRVRANGTTELVIPSSMISGVVQLRFYAEPMVTGGQRSYLSELIPVQPGDQIDFLIPF
Ga0068852_1003853702	3300005616	Corn Rhizosphere	MRRSREWASSMRRAIGARAIWGVALAGLAVVGGCSSGQQPRKPTNEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0068866_105334362	3300005718	Miscanthus Rhizosphere	MRNSKGWASLALGSIDARAIWGISLAGLAVVGGCGGGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0068860_1002899602	3300005843	Switchgrass Rhizosphere	MRSAFGARAIWRIALAGLTVVGACSSGQQPRKPSSEPTTGGTVDLNGGRTSNKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0066651_100562663	3300006031	Soil	VGGCATGQKTASAPPDEAVDLNSGGRTSNRTTVVVDNQNLNEMTIYAYQGTQRLRLGRARGSATTEIRIPSSLLSGLVELRFYAVPMTSGSRAYLSEVIPVQPGDQVDFLIPFTR*
Ga0066652_1000065058	3300006046	Soil	MRRSSGWASSVRGALGARAIWRIALAGLAVVGGCATGQKTASAPPDEAVDLNSGGRTSNRTTVVVDNQNLNEMTIYAYQGTQRLRLGRARGSATTEIRIPSSLLSGLVELRFYAVPMTSGSRAYLSEVIPVQPGDQVDFLIPFTR*
Ga0079222_122950121	3300006755	Agricultural Soil	MRSSNEGASSVRRVIGPRAIWAVALAGLLAAGGCATGRKQPPASQADGPIDLNTGRRVSKNADKTTVVVDNQNLNEMTIYAYQGTQRMRLGRVRANATTELVIPSSIVSGVVQMRFFAEPMATGGQRSYLSEVIPVQPGDQIDFLIPFTR*
Ga0075428_1010252371	3300006844	Populus Rhizosphere	MRSSNEWAPSVLGSIGARAIWAIALSGLGVVGGCTRGQQPPPATQPAPGVVDLNSSGGRTNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0075420_1004216911	3300006853	Populus Rhizosphere	MRSSNEWAPSVLGSIGARAIWAIALSGLGVVGGCTRGQQPPPATQPAPGVVDLNSSGGRTNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRVRGSATTELRIPTSIVSGLVQMRFYAEPMVTG
Ga0079217_101392342	3300006876	Agricultural Soil	MRRSNEWWASSRRGAFGARAIWGVALAGLALVGGCATGQKTSSQPSTGAVDLNTGERGKSDKTTVLVDNQNLNEMTIYAYQGTQRMRLGRARATATTELRIPSSIVSGVVQMRFYAEPMVTGGQRAYVSEMIPVQPGDQVDFLIPYTR*
Ga0079216_116870702	3300006918	Agricultural Soil	MRRSNEVWASSRRGAFGARAIWGVALAGLALVGGCATGQKPSSQPSTGAVDLNTGERGRSDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRVRATATTVLRIPSSMVSGVVQMRFYAEPMVTG
Ga0079218_100346111	3300007004	Agricultural Soil	VALAGLALVGGCATGQKTSSQPSTGAVDLNTGERGKSDKTTVLVDNQNLNEMTIYAYQGTQRMRLGRARATATTELRIPSSIVSGVVQMRFYAEPMVTGGQRAYVSEMIPVQPGDQVDFLIPYTR*
Ga0111539_116416522	3300009094	Populus Rhizosphere	MRNSKGWASLALGSIDARAIWGIALAGLAVVGGCAGGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATATTELKIPNSIVSGPVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR*
Ga0075418_115440471	3300009100	Populus Rhizosphere	RGQQPPPATQPAPGVVDLNSSGGRTNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRVRGSATTELRIPTSIVSGLVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR*
Ga0111538_102361324	3300009156	Populus Rhizosphere	VGGCSSGQQPRKPSSEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0105241_122251891	3300009174	Corn Rhizosphere	QRPPATEAAGPIDLNSGRRVSKNADKTTVVVDNQNLNEMTIYAYQGTQRMRLGRVRSNATTELVIPSSMISGVVQIRFYAEPMVTGGQRAYLSEVIPVQPGDQIDFLIPFTR*
Ga0105242_116514591	3300009176	Miscanthus Rhizosphere	MRSAFGARAIWRIAPAGLTVVGACSSGQQPRKPSSEPTTGGTVDLNGGRTSNKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRVYISEMIPVQLGDQVDFLIPFTR*
Ga0105248_121287102	3300009177	Switchgrass Rhizosphere	MRRAIGARAIWGVALAGLAVVGGCSSGQQPRKPTNEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0105248_122739652	3300009177	Switchgrass Rhizosphere	GAFGARAIWGVALAGLAVVIGCASGRQGQKPSSEATSGAADLNGNRGSGKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASSTTELQIPSSLISGLVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0105238_108156431	3300009551	Corn Rhizosphere	MRASSVRRVIGPRAIWAIALAGLALAGGCASGGKRPSSTDASGPIDLNTGRRISKNADKTTVVVDNQNLNEMTIYAYQGTQRMRLGRAKSQGLTELKIPSSIVNGVVQMRFLAEPM
Ga0105249_107860192	3300009553	Switchgrass Rhizosphere	VGGCSSGQQPRKPTNEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0126307_100269215	3300009789	Serpentine Soil	MRGFGEVWAMSGRRAVSARAIWGIALAVLALGGCASGRGASETPPPGSVDLNTGERSPDKTTVLVDNQNLNEMTIYAYQGTQRMRLGRAKSSGITELRIPASLVSGVVQMRFFAQPMVTGGQRAYLSEMIPVQPGDQVDFLIPFTR*
Ga0126307_102062792	3300009789	Serpentine Soil	MRNSKGWASLVLGSIDARAIWGMALAGLAVLGGCTGGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATATTELRIPTSIVSGPVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR*
Ga0126307_103465451	3300009789	Serpentine Soil	ALGGCATGKGTIEPPSSGGMDLNTGGPRRDESATTVRVDNQNLNEMTIYAYQGTQRMRLGRARSSGVTEMRIPSSMVSGVVQMRFYAQPMVTGGQRSYLSETIPVQPGDQVDFLIPFTR*
Ga0126313_104283931	3300009840	Serpentine Soil	MRRSNEWASSVWSAFGARAIWGIALAGLAVVGGCASGQKTGKTASAPTTGVIDLNTGRAVSSAAGKTTVVVDNQNLNEMTIYAYQGTQRMRLGRVRASATTVLQIPASMISGVVQMRFFAEPMVTGGQRAYLSETIPVQPGDQVDFLIPFTR*
Ga0126309_101473461	3300010039	Serpentine Soil	IALAVLALGGCASGRGGSETPPPGSVDLNTGERSPDKTTVLVDNQNLNEMTIYAYQGTQRMRLGRAKSSGLTELRIPKSLVSGVVQMRFYAQPMVTGGQRAYLSEMIPVQPGDQVDFLIPFTR*
Ga0126306_109868041	3300010166	Serpentine Soil	MALAGLALVAGCATGQKTANEPPSGAIDLNSGQRSADKTTVLVDNQNLNEMTIYAYQGTQRMRLGRARATSTTELRIPSSIVSGVVQMRFYAEPMVTGGQRAYLSEMIPVQPGDQVDFLIPYTR*
Ga0105246_109026271	3300011119	Miscanthus Rhizosphere	MRRTFGARAIWGVALAGLAVVGGCSSGQQPRKPTSEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0137436_11710941	3300011423	Soil	LGSIGARAIWGIALAGLAVVGGCARGHKQPAPTPGAVDLNGGGRSNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRVRGSATTELKIPTSIVSGPVQMRFYAEPMVTGGQRAYLSETIPVQPGDQVDFLIPYTR*
Ga0150985_1004057631	3300012212	Avena Fatua Rhizosphere	LSVVGGCAHNQKPATAPSSSVVDLNGGHTTDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRAKATGTTELQIPSSMVSGLVQMRFFAEPMVTGGQRSYLSEMIPVQPGDQVDFLIPFTR*
Ga0150985_1119367961	3300012212	Avena Fatua Rhizosphere	VVAGACSRSPKTTSEPDTGVVDLNGGGRARTGTTVVVDNQNLNEMTIYAYEGTQRLRIGRAKATGLTELRIPSSIVSGPVQMRFYAEPLVTGGQRSYLSEVIPVQPGDQVDFLIPYTR*
Ga0150984_1044075642	3300012469	Avena Fatua Rhizosphere	LSVVGGCAHNQKPATAPSSSVVDLNGGHTTDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRAKATGTTELQIPSSMVSGLVQMRFFAEPMVTGGQRSYLSE
Ga0157283_100972301	3300012907	Soil	LALGSIDARAIWGIALAGLAVVGGCASGQKQRVPAPASGTVDLNSGGRTSDKTTVVVDNQNLNEMTIYAYQGTQRLRLGRVRGSATTELQIPTSIVSGPVQMRFYAEPMVTGGQRSYLSEMIPVQPGDQIDFLIPFTR*
Ga0157308_104578691	3300012910	Soil	SIDARAIWGIALAGLAVVGGCAGGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATATTELKIHNSIVSGPVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR*
Ga0157298_100424252	3300012913	Soil	MRSAFGARAIWRIALAGLAVVGACSSGQQPRKPSSEPTTGGTVDLNGGRTSNKTTVVVDNQNLNEMTIYAYQGTQRMRLGRVRATATTELKIPNSMVSGPVQMRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0157297_101741501	3300012914	Soil	MRNSKGWASLVLGSIDARAIWGIALAGLAVVGGCASGQKQRVPAPASGTVDLNSGGRTSDKTTVVVDNQNLNEMTIYAYQGTQRLRLGRVRGSATTELQIPTSIVSGPVQMRFYAEPMVTGGQRSYLSEMIPVQPGD
Ga0157373_111141761	3300013100	Corn Rhizosphere	VIGPRAIWAIALAWPAVAGGCASGGQRPPATEAAGPIDLNSGRRVSKNADKTTVVVDNQNLNEMTIYAYQGTQRMRLGRVRSNATTELVIPSSMISGVVQIRFYAEPMVTGGQRSYLSELIPVQPGDQIDFLIPF
Ga0157374_123166441	3300013296	Miscanthus Rhizosphere	GLAVVIGCASGRQGQKPSSEATSGAVDLNGNRGSGKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASSTTELQIPSSLISGLVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR*
Ga0157380_111332712	3300014326	Switchgrass Rhizosphere	MRNSKGWASLALGSIDARAIWGISLAGLAVVGGCGGGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATATTELKIPNSIVSGPVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDF
Ga0157377_108424382	3300014745	Miscanthus Rhizosphere	MRSSNEGASSVRRASGPRAIWAIALAGLALAGGCASGGKRPASTDASDPIDLNTGRRISKNADKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARSQGLTQLKIPPSIVNGVVQMRFLAEPMVTGGQRAYLSEVIPVQPGDQVDFLIPYTR*
Ga0190269_115463431	3300018465	Soil	MRRSNEVWASSRRGALGARAIWGVALAGLALVGGCATNQKPESDVPPGAVDLNTGGRGATDKTTVLVDNQNLNEMTIYAYQGTQRMRLGRARATSTTSLQIPSSIVSGVVQMRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR
Ga0190274_104547822	3300018476	Soil	MRSSKGWASSVLGSIDARAIWAIALVGFALVGGCARGQKQSGPAPDPGAVDLNSSGGRAADRTTVVVDNQNLSEMTIYAYQGTQRMRLGRARASATTELRIPTSIVSGIVQMRFYAEPMVTGGQRSYLSEMIPVQPGDQVDFLIPFTR
Ga0190274_114942372	3300018476	Soil	MRWFSGRMSAHGRSTGVRAIWGIAFGVMTLAGGCASAHSSVPSDAVDLNGQPRSETTVVVDNQNLNEMTIYAYQGNQRMRLGRIRGSAVSQLRIPSSIVSGVVQLRFFAQPMGNQRAFLSEIIPVQPGDQVDWLIPYTR
Ga0222622_100040552	3300022756	Groundwater Sediment	MRRSGEWASSMLGAFGARAIWGIALAGLAAVGGCTSGRQGQKPSSEPTSGVVDLNGNRSSGKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASSTTELQIPSSLISGLVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR
Ga0222622_104048651	3300022756	Groundwater Sediment	MRSSKGWASLALGSIDARAIWGMALAGLAVVGGCGGGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATATTELKIPNSIVSGPVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR
Ga0207697_100319352	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRRAFGARAIWGVALAGLAVVGGCSSGQQPRKPTNEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR
Ga0207645_101884242	3300025907	Miscanthus Rhizosphere	MRNSKGWAALVLGSIDARAIWGISLAGLAVVGGCGGGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATATTELKIPNSIVSGPVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR
Ga0207654_111781582	3300025911	Corn Rhizosphere	QRPPATEAAGPIDLNSGRRVSKNADKTTVVVDNQNLNEMTIYAYQGTQRMRLGRVRSNATTELVIPSSMISGVVQIRFYAEPMVTGGQRAYLSEVIPVQPGDQIDFLIPFTR
Ga0207649_109027332	3300025920	Corn Rhizosphere	MRSSNERASSVRGAVGPRAIWAIALAGLAIVGGCASGQKQPSTNDPAAGTIDLNTGRRVSGNSDKTTVVVDNQNLNEMTIYAYQGTQRLRLGKVRANATTQLVIPSSMIGGVVQMRFYAEPLATGGQRAYLSELIPVQPGDQVDFLIPFTR
Ga0207681_100312444	3300025923	Switchgrass Rhizosphere	MRRTFGARAIWGVALAGLAVVGGCSSGQQPRKPTNEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR
Ga0207650_100475693	3300025925	Switchgrass Rhizosphere	MRRAFGARAIWGVALAGLAVVGGCSSGQQPRKPTSEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR
Ga0207659_104695211	3300025926	Miscanthus Rhizosphere	MLGAFGARAIWGVALAGLAVVIGCASGRQGQKPSSEATSGAVDLNGNRGSGKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASSTTELQIPSSLISGLVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR
Ga0207644_101241912	3300025931	Switchgrass Rhizosphere	MRRSREWASSMRRAIGARAIWGVALAGLAVVGGCSSGQQPRKPTSEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR
Ga0207706_101505442	3300025933	Corn Rhizosphere	MRRSREWASSMRRAFGARAIWGVALAGLAVVGGCSSGQQPRKPTSEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATATTELKIPNSIVSGPVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR
Ga0207670_104674971	3300025936	Switchgrass Rhizosphere	MRRAFGARAIWGVALAGLAVVGGCSSGQQPRKPTNEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTRSGGRS
Ga0207669_103205383	3300025937	Miscanthus Rhizosphere	GGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATATTELKIPNSIVSGPVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR
Ga0207661_103080052	3300025944	Corn Rhizosphere	MWRAFGARAIWGVALAGLAVVGGCSSGQQPRKPTSEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR
Ga0207651_103699011	3300025960	Switchgrass Rhizosphere	WGVALAGLAVVIGCASGRQGQKPSSEATSGAVDLNGNRGSGKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASSTTELQIPSSLISGLVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR
Ga0207703_106886721	3300026035	Switchgrass Rhizosphere	VALAGLAVVGGCSSGQQPRKPTSEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR
Ga0207648_106142622	3300026089	Miscanthus Rhizosphere	MRNSKGWASLALGSIDARAIWGIALAGLAVVGGCAGGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATATTELKIPNSIVSGPVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR
Ga0207683_101615173	3300026121	Miscanthus Rhizosphere	MRSSKGWASLALGSIDARAIWGMALAGLAVVGGCGGGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR
Ga0207698_104123871	3300026142	Corn Rhizosphere	MLGAFGARAIWGVALAGLAVVIGCASGRQGQKPSSEATSGAVDLNGDRGSGKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASSTTELQIPSSLISGLVQIRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPFTR
Ga0209468_11022482	3300026306	Soil	MRRSSGWASSVRGALGARAIWRIALAGLAVVGGCATGQKTASAPPDEAVDLNSGGRTSNRTTVVVDNQNLNEMTIYAYQGTQRLRLGRARGSATTEIRIPSSLLSGLVELRFYAVPMTSGSRAYLSEVIPVQPGDQVDFLIPFTR
Ga0268266_110052871	3300028379	Switchgrass Rhizosphere	MRRAFGARAIWGVALAGLAVVGGCSSGQQPRKPTNEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMIPVQPGDQV
Ga0268265_117573831	3300028380	Switchgrass Rhizosphere	MRRAFGARAIWGVALAGLAVVGGCSSGQQPRKPTNEPTTGTVDLNSGRTSNSKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELQIPSSLISGVVQIRFYAEPMVTGGQRAYISEMI
Ga0268240_100071892	3300030496	Soil	MALAGLALVGGCASGRRSPASTEESGPVDLNTGRRISKNADKTTVVVDNQNLNEMTIYAYQGTQRMRLGRVRASATTELVIPASMISGVVQMRFYAEPMVTGGQRSYLSETIPVQPGDQVDFLIPFTR
Ga0268240_101237561	3300030496	Soil	MRGAIGPRAIWAIALAALALVGGCASGRKNPPASDASGPIDLNTGRRVSKNADKTTVVVDNQNLNEMTIYAYQGTQRMRLGRVRASATTELVIPASMISGVVQMRFYAEPMVTGGQRSYLSE
Ga0308183_10454541	3300030988	Soil	MRSSKGWASLMLGSIDARAIWGIALAGLVALGGCARGQTQGAPKPDPGAVDLNSNGGRTGDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASATTELRIPTSIVSGIVQMRFYAEPMVTGGQRSYLSEMIPVQPGDQVDFLIPFTR
Ga0308189_104703501	3300031058	Soil	MAGFTEVVALIRRTAGARTIWGIALAALALGGCASGKAASEPPSGAVDLNTGRRTGGDRTTVLVDNQNLSEMTIYAYQGTQRFRLGRAKSSGRTELRIPPSMINGVVQMRFYAQPSVTGGQRSYLSEMIHVQPGDQIDFLIPFTR
Ga0307408_1001412892	3300031548	Rhizosphere	MALAGLALVGGCAAGQKTSTTDIPAGAVDLNTGQRNPDKTTVLVDNQNLNEMTIYAYQGTQRMRLGRARATSTTELRIPSSIVSGVVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR
Ga0310813_124070461	3300031716	Soil	MRRSREWASSMLGAFGARAIWGIALAGLAAVGGCTSGRQGQKPSSEPTSGVVDLNGNRSSGKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARASSTTELQIPSSLISGLVQIRFYAEPMVTGGQRAY
Ga0307413_101770672	3300031824	Rhizosphere	MALAGLGLVAGCATGQKTGSELPPGAIDLNTGQRSADKTTVLVDNQNLNEMTIYAYQGTQRMRLGRARATSTTELRIPSSIVSGVVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR
Ga0307406_104352752	3300031901	Rhizosphere	MALVGLALAGGCATGQKTSTTDLPAGAVDLNTGQRNPDKTTVLVDNQNLNEMTIYAYQGTQRMRLGRARATSTTELRIPSSIVSGVVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR
Ga0307407_111297022	3300031903	Rhizosphere	ASLVLGSIDARAIWGMALAGLAVVGGCTGGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATATTELRIPTSIVSGPVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR
Ga0307412_114533281	3300031911	Rhizosphere	AIWGMAFACLAAVGGCATAQKTPSELPPGTVDLNSGQRVSDKTTVLVDNQNLNEMTIYAYQGTQRMRLGRARATATTELRIPSSIVSGVVQMRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPYTR
Ga0308175_1003417061	3300031938	Soil	MRSSKELASSVPGAVGPRAIWVIALAGLVIVGGCASGRKQPPASDPASGTIDLNTGRRVSGNSDKTTVVVDNQNLNEMTIYAYQGTQRLRLGRVRANATTQLVIPPSMISGVVQMRFYAEPLATGGQRAYLSEQIPVQPGDQVDFLIPITR
Ga0308175_1003591521	3300031938	Soil	MRSSNGWASSVRAVFGARAIWGVALAGLAVVGGCSRSPQTTSAPDTGVVDLNGAGRTRDNTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATGLTELRIPKSMVSGLVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR
Ga0308174_100898183	3300031939	Soil	MRSSNGWASSVRAAFSARAIWGIALAGLVVAGGCSRSPKTTSAPDTGVVDLNGGGRSADGNTTVVVDNQNLNEMTIYAYQGTQRMRLGRVRATGVTELRIPKSIVSGPVQMRFYAEPMVTGGQRSYISELIPVQPGDQVDFLIPYTR
Ga0308174_103823792	3300031939	Soil	MRSSNGWASSVGAGFGTRAIWGIALAGLVVAGACSRSPKTTSEPDTGVVDLNGGGRARTGTTVVVDNQNLNEMTIYAYEGTQRLRIGRAKATGLTELRIPSSFVSGPVQMRFYAEPLVTGGQRSYLSEVIPVQPGDQVDFLIPYTR
Ga0310885_103328852	3300031943	Soil	MRSSKGWASLALGSIDARAIWAIALVALAVVGGCARGRNQSGPAPEPGAVDLNSSGGRAGEKTTVLVDNQNLNEMTIYAYQGTQRMRLGRVRGSATTELRIPTSIVSGVVQLRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPYTR
Ga0310902_109572711	3300032012	Soil	RNSKGWASLVLGSIDARAIWGISLAGLAVVGGCGGGQKQPVLAPAPGTVDLNSGGRVNDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRARATATTELKIPNSIVSGPVQMRFYAEPMVTGGQRSYISEMIPVQPGDQVDFLIPYTR
Ga0308173_105094022	3300032074	Soil	MRSSNGWASSVGAGFGTRAIWGIALAGLVVAGACSRSPKTTSEPDTGVVDLNGGGRARTGTTVVVDNQNLNEMTIYAYEGTQRLRIGRAKATGLTELRIPSSIVSGPVQMRFYAEPLVTGGQRSYLSEVIPVQPGDQVDFLIPYTR
Ga0310890_111662091	3300032075	Soil	MRSSKGWASLALGSIDARAIWAIALVGLAVVGGCARGRNQSGPAPEPGAVDLNSSGGRAGEKTTVLVDNQNLNEMTIYAYQGTQRMRLGRARASATTELRIPTSIVSGIVQMRFYAEPMVTGGQRAYLSEMIPVQPGDQVDFLIPFTR
Ga0307415_1023854191	3300032126	Rhizosphere	RAIWRVALAGLALAGACATGKQASELPPGTIDLNTGQRTSDKTTVLVDNQNLNEMTIYAYQGTQRMRLGRARATATTELRIPSSIVSGVVQMRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLIPYTR
Ga0247829_103877191	3300033550	Soil	MRSSKGWASSVLGSIDARAIWAIALAGLVVVSGCASGQKQPIPAPAPGTVDLNSSGGRTGSDKTTVVVDNQNLNEMTIYAYQGTQRMRLGRVRGSATTELRIPTSIVSGVVQLRFYAEPMVTGGQRAYISEMIPVQPGDQVDFLI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082501

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences