Metagenome / Metatranscriptome Family F082429

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F082429
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	85 residues
Representative Sequence	HVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG
Number of Associated Samples	89
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	12.50 %
% of genes near scaffold ends (potentially truncated)	85.84 %
% of genes from short scaffolds (< 2000 bps)	84.96 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (53.982 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (46.903 % of family members)
Environment Ontology (ENVO)	Unclassified (71.681 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (76.106 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.68% β-sheet: 0.00% Coil/Unstructured: 47.32%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00583	Acetyltransf_1	8.85
PF04014	MazE_antitoxin	4.42
PF13508	Acetyltransf_7	4.42
PF01866	Diphthamide_syn	3.54
PF01850	PIN	3.54
PF13649	Methyltransf_25	3.54
PF13847	Methyltransf_31	2.65
PF05175	MTS	1.77
PF01408	GFO_IDH_MocA	1.77
PF01037	AsnC_trans_reg	1.77
PF12850	Metallophos_2	0.88
PF00149	Metallophos	0.88
PF00795	CN_hydrolase	0.88
PF14528	LAGLIDADG_3	0.88
PF03176	MMPL	0.88
PF13602	ADH_zinc_N_2	0.88
PF00252	Ribosomal_L16	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1736	Diphthamide synthase subunit DPH2	Translation, ribosomal structure and biogenesis [J]	3.54
COG0197	Ribosomal protein L16/L10AE	Translation, ribosomal structure and biogenesis [J]	0.88
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.88
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.98 %
All Organisms	root	All Organisms	46.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.98 %
cellular organisms	root	All Organisms → cellular organisms	46.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.98 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	45.13 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.98 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	4.42 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.98 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	4.42 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.98 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	4.42 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.98 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	4.42 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.88 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002560\|JGI25383J37093_10031857	All Organisms → cellular organisms → Archaea	1760	Open in IMG/M
3300002562\|JGI25382J37095_10191422	Not Available	623	Open in IMG/M
3300005167\|Ga0066672_10153095	Not Available	1447	Open in IMG/M
3300005167\|Ga0066672_10215994	All Organisms → cellular organisms → Archaea	1226	Open in IMG/M
3300005174\|Ga0066680_10922285	Not Available	516	Open in IMG/M
3300005176\|Ga0066679_10997828	Not Available	521	Open in IMG/M
3300005177\|Ga0066690_11004134	Not Available	524	Open in IMG/M
3300005177\|Ga0066690_11033537	Not Available	514	Open in IMG/M
3300005179\|Ga0066684_10707703	Not Available	674	Open in IMG/M
3300005180\|Ga0066685_10007814	All Organisms → cellular organisms → Archaea	5772	Open in IMG/M
3300005180\|Ga0066685_10167975	All Organisms → cellular organisms → Archaea	1497	Open in IMG/M
3300005181\|Ga0066678_10406859	All Organisms → cellular organisms → Archaea	902	Open in IMG/M
3300005181\|Ga0066678_11061479	Not Available	522	Open in IMG/M
3300005186\|Ga0066676_10568987	All Organisms → cellular organisms → Archaea	768	Open in IMG/M
3300005446\|Ga0066686_10077697	All Organisms → cellular organisms → Archaea	2095	Open in IMG/M
3300005446\|Ga0066686_10353423	Not Available	1003	Open in IMG/M
3300005446\|Ga0066686_11001671	Not Available	542	Open in IMG/M
3300005540\|Ga0066697_10570774	Not Available	631	Open in IMG/M
3300005542\|Ga0070732_10000955	All Organisms → cellular organisms → Archaea	16348	Open in IMG/M
3300005552\|Ga0066701_10538827	All Organisms → cellular organisms → Archaea	718	Open in IMG/M
3300005553\|Ga0066695_10185174	Not Available	1303	Open in IMG/M
3300005556\|Ga0066707_10031775	All Organisms → cellular organisms → Archaea	2931	Open in IMG/M
3300005556\|Ga0066707_10349546	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300005557\|Ga0066704_10122814	All Organisms → cellular organisms → Archaea	1723	Open in IMG/M
3300005560\|Ga0066670_10865382	Not Available	549	Open in IMG/M
3300005568\|Ga0066703_10173331	Not Available	1302	Open in IMG/M
3300005568\|Ga0066703_10848111	Not Available	521	Open in IMG/M
3300005586\|Ga0066691_10704081	Not Available	597	Open in IMG/M
3300005598\|Ga0066706_10315963	All Organisms → cellular organisms → Archaea	1232	Open in IMG/M
3300006034\|Ga0066656_10060843	All Organisms → cellular organisms → Archaea	2205	Open in IMG/M
3300006796\|Ga0066665_11080607	All Organisms → cellular organisms → Archaea	612	Open in IMG/M
3300006797\|Ga0066659_11454412	Not Available	573	Open in IMG/M
3300006804\|Ga0079221_10688679	Not Available	709	Open in IMG/M
3300007258\|Ga0099793_10236130	Not Available	881	Open in IMG/M
3300007258\|Ga0099793_10471981	Not Available	622	Open in IMG/M
3300009012\|Ga0066710_100065506	All Organisms → cellular organisms → Archaea	4623	Open in IMG/M
3300009012\|Ga0066710_103022711	Not Available	654	Open in IMG/M
3300009038\|Ga0099829_10301639	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1314	Open in IMG/M
3300009038\|Ga0099829_10345875	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1224	Open in IMG/M
3300009088\|Ga0099830_10024772	All Organisms → cellular organisms → Archaea	3969	Open in IMG/M
3300009137\|Ga0066709_100427028	Not Available	1846	Open in IMG/M
3300010303\|Ga0134082_10253172	All Organisms → cellular organisms → Archaea	730	Open in IMG/M
3300010304\|Ga0134088_10008740	All Organisms → cellular organisms → Archaea → Euryarchaeota	4294	Open in IMG/M
3300010323\|Ga0134086_10162631	All Organisms → cellular organisms → Archaea	820	Open in IMG/M
3300010325\|Ga0134064_10052019	Not Available	1257	Open in IMG/M
3300010326\|Ga0134065_10150581	Not Available	812	Open in IMG/M
3300010333\|Ga0134080_10070318	Not Available	1403	Open in IMG/M
3300010333\|Ga0134080_10574500	Not Available	545	Open in IMG/M
3300010337\|Ga0134062_10192880	All Organisms → cellular organisms → Archaea	925	Open in IMG/M
3300011270\|Ga0137391_10868653	Not Available	740	Open in IMG/M
3300012198\|Ga0137364_10260715	All Organisms → cellular organisms → Archaea	1282	Open in IMG/M
3300012198\|Ga0137364_11288913	Not Available	544	Open in IMG/M
3300012199\|Ga0137383_10470481	All Organisms → cellular organisms → Archaea	921	Open in IMG/M
3300012201\|Ga0137365_10206223	All Organisms → cellular organisms → Archaea	1468	Open in IMG/M
3300012206\|Ga0137380_11313282	All Organisms → cellular organisms → Archaea	608	Open in IMG/M
3300012207\|Ga0137381_10702706	Not Available	879	Open in IMG/M
3300012210\|Ga0137378_10756552	Not Available	884	Open in IMG/M
3300012211\|Ga0137377_10817585	Not Available	864	Open in IMG/M
3300012349\|Ga0137387_10370430	All Organisms → cellular organisms → Archaea	1038	Open in IMG/M
3300012351\|Ga0137386_10242896	All Organisms → cellular organisms → Archaea	1295	Open in IMG/M
3300012354\|Ga0137366_10943660	Not Available	604	Open in IMG/M
3300012356\|Ga0137371_10336128	Not Available	1174	Open in IMG/M
3300012356\|Ga0137371_10927465	Not Available	662	Open in IMG/M
3300012359\|Ga0137385_10050737	Not Available	3709	Open in IMG/M
3300012373\|Ga0134042_1149293	Not Available	577	Open in IMG/M
3300012922\|Ga0137394_10586982	Not Available	943	Open in IMG/M
3300012925\|Ga0137419_11717300	Not Available	536	Open in IMG/M
3300012972\|Ga0134077_10130227	Not Available	992	Open in IMG/M
3300012972\|Ga0134077_10377828	Not Available	608	Open in IMG/M
3300012976\|Ga0134076_10053685	Not Available	1525	Open in IMG/M
3300012977\|Ga0134087_10148251	All Organisms → cellular organisms → Archaea	1019	Open in IMG/M
3300014150\|Ga0134081_10192886	Not Available	689	Open in IMG/M
3300014154\|Ga0134075_10505598	Not Available	542	Open in IMG/M
3300015358\|Ga0134089_10366089	Not Available	610	Open in IMG/M
3300015358\|Ga0134089_10425274	Not Available	571	Open in IMG/M
3300017654\|Ga0134069_1188145	Not Available	701	Open in IMG/M
3300017656\|Ga0134112_10011437	Not Available	2937	Open in IMG/M
3300017657\|Ga0134074_1143444	Not Available	833	Open in IMG/M
3300017657\|Ga0134074_1158944	Not Available	792	Open in IMG/M
3300017659\|Ga0134083_10162398	All Organisms → cellular organisms → Archaea	909	Open in IMG/M
3300021046\|Ga0215015_10210273	Not Available	969	Open in IMG/M
3300026306\|Ga0209468_1056016	All Organisms → cellular organisms → Archaea	1330	Open in IMG/M
3300026309\|Ga0209055_1111713	All Organisms → cellular organisms → Archaea	1063	Open in IMG/M
3300026314\|Ga0209268_1000298	All Organisms → cellular organisms → Archaea	27672	Open in IMG/M
3300026326\|Ga0209801_1044642	All Organisms → cellular organisms → Archaea	2037	Open in IMG/M
3300026327\|Ga0209266_1137756	All Organisms → cellular organisms → Archaea	1010	Open in IMG/M
3300026329\|Ga0209375_1054221	All Organisms → cellular organisms → Archaea	1981	Open in IMG/M
3300026331\|Ga0209267_1141782	All Organisms → cellular organisms → Archaea	997	Open in IMG/M
3300026332\|Ga0209803_1002144	All Organisms → cellular organisms → Archaea	12484	Open in IMG/M
3300026333\|Ga0209158_1024292	All Organisms → cellular organisms → Archaea	2693	Open in IMG/M
3300026333\|Ga0209158_1201983	All Organisms → cellular organisms → Archaea	694	Open in IMG/M
3300026333\|Ga0209158_1303387	Not Available	550	Open in IMG/M
3300026335\|Ga0209804_1154227	All Organisms → cellular organisms → Archaea	1022	Open in IMG/M
3300026343\|Ga0209159_1203432	All Organisms → cellular organisms → Archaea	632	Open in IMG/M
3300026343\|Ga0209159_1227725	Not Available	573	Open in IMG/M
3300026343\|Ga0209159_1229787	Not Available	569	Open in IMG/M
3300026499\|Ga0257181_1011222	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1206	Open in IMG/M
3300026524\|Ga0209690_1194905	Not Available	651	Open in IMG/M
3300026532\|Ga0209160_1013501	All Organisms → cellular organisms → Archaea	5812	Open in IMG/M
3300026537\|Ga0209157_1154372	Not Available	1026	Open in IMG/M
3300026538\|Ga0209056_10520711	Not Available	614	Open in IMG/M
3300026540\|Ga0209376_1258129	Not Available	739	Open in IMG/M
3300026542\|Ga0209805_1364353	Not Available	552	Open in IMG/M
3300026547\|Ga0209156_10102898	Not Available	1418	Open in IMG/M
3300026547\|Ga0209156_10428655	All Organisms → cellular organisms → Archaea	549	Open in IMG/M
3300027748\|Ga0209689_1341212	Not Available	574	Open in IMG/M
3300027842\|Ga0209580_10001263	All Organisms → cellular organisms → Archaea	11912	Open in IMG/M
3300027862\|Ga0209701_10095591	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1861	Open in IMG/M
3300027862\|Ga0209701_10271700	All Organisms → cellular organisms → Archaea	983	Open in IMG/M
3300031962\|Ga0307479_10270634	All Organisms → cellular organisms → Archaea	1679	Open in IMG/M
3300032180\|Ga0307471_100526622	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1333	Open in IMG/M
3300032205\|Ga0307472_102300640	All Organisms → cellular organisms → Archaea	545	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	51.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	46.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.24%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	20.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25383J37093_100318573	3300002560	Grasslands Soil	GSISLTFSDGIVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG*
JGI25382J37095_101914221	3300002562	Grasslands Soil	RSVVDGRPPRLLTQAGSISLTFSDGIVHVMLDQTGDWTITAGLSILSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG*
Ga0066672_101530951	3300005167	Soil	DGIVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEQTLLRVLKSFQSSTVPSYIG*
Ga0066672_102159941	3300005167	Soil	GDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSATVPSYIG*
Ga0066680_109222852	3300005174	Soil	TFSDGIVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQASSVPSYIG*
Ga0066679_109978282	3300005176	Soil	GIVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEDLGFFQAAEQGGMVYHLWTSALKEHYADRSKAEETLLRVLKSFQSSTVPSYIG*
Ga0066690_110041341	3300005177	Soil	SLTFSDGIVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG*
Ga0066690_110335372	3300005177	Soil	LTFSDGIVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQASSVPSYIG*
Ga0066684_107077031	3300005179	Soil	DWTITAGLSVLSDRLVPLTKALEDLGFFQATEQSGMIYHLWTSALHEDHENRNIAEETLLRVLKSFQSHPAPGYIS*
Ga0066685_100078141	3300005180	Soil	HVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG*
Ga0066685_101679752	3300005180	Soil	MLDQTGDWTITAGLSVLSDRLLPLTRALEDLGFFQATEQAGMVYHLWTSALHEDYENRKNAEETLLRVLISFQSHSTPSYIG*
Ga0066678_104068591	3300005181	Soil	DGIVHVMLDQTGDWTITAGLSVVSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQASYVPIYIG*
Ga0066678_110614791	3300005181	Soil	DQTGDWTITAGLSVLSDRLLSLTRSLEDLGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG*
Ga0066676_105689872	3300005186	Soil	LDQTGDWTITAGLSVLSDRLLPLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQASSVPSYIG*
Ga0066686_100776971	3300005446	Soil	DWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG*
Ga0066686_103534232	3300005446	Soil	MLDQSGDWTITAGLSVVSDRLLPLTRALEDLGFFQATEEAGIVYHLWTSALHEDQDNRNIAEETLLRVLKSFQSHSAPSYIG*
Ga0066686_110016711	3300005446	Soil	DGVVHVMLDRTGDWTITAGLSLLSDRLLPLSKALEDLGFFQATEQAGMVYHLWTSALQEDRHDDRNIAEETLLGVLKSFQ*
Ga0066697_105707742	3300005540	Soil	FSDGVVHVMLDRTGDWTITAGLSLLSDRLLPLSKALEDLGFFQATEQAGMVYHLWTSALQEDRHDDRNIAEETLLGVLKSFQSHSTPSYIG*
Ga0070732_100009552	3300005542	Surface Soil	MLDQTGDWTITAGLSLLSDRLAPLTKALDNLGFFQATEESGMVYHLWTSALDENHDNRITAEETLLRVLKSFQSHSSPGYIS*
Ga0066701_105388271	3300005552	Soil	GDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSTTVPSYIG*
Ga0066695_101851741	3300005553	Soil	DWTITAGLSVLSDRLLSLSRELEDLGFFQAAEHAGMVYHLWTSALHEDHESRNGAEATLLRVLKSFQSHSAPSYIG*
Ga0066707_100317751	3300005556	Soil	SLTFSDGIVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEDLGFFQAAEQGGMVYHLWTSALKEHYSDRSEAEETLLRVLKSFQSSVVPSYIG*
Ga0066707_103495461	3300005556	Soil	VVHVMLDQTGDWTITAGVSVLSDRLLPLTRSLEDLGFFQAAEQAGVVYHLWTSALHEDQDNRNIAEETLLRVLKSFQSHPAPGYIS*
Ga0066704_101228141	3300005557	Soil	GIVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEDLGFFHAAEQGGMVYHLWTSSLKEHYSDRSEAEETLLRVLKSFQSSTVPTYIG*
Ga0066670_108653821	3300005560	Soil	HVMLDQTGDWTITAGLSVVSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTIPSYIG*
Ga0066703_101733314	3300005568	Soil	VHVMLDQTGDWTITAGLSVVSDRLLSLTRSLEELGFFQAAEQGGIVYHLWTSALKEHYADRSKAEETLLRVLKSFQSSTVPSYIG*
Ga0066703_108481111	3300005568	Soil	MLDQTGDWTITAGLSVLSDRLLSLTRSLEDLGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG*
Ga0066691_107040812	3300005586	Soil	LDQTGDWTITAGLSVLSDRLLSLTRSLEDLGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG*
Ga0066706_103159632	3300005598	Soil	TFSDGIVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG*
Ga0066656_100608432	3300006034	Soil	MLDEAGDWTITAGLSVLSDRLLSLSRALEDLGFFQATEQAGMIYHLWTSALHEDHENRNIAEETLLRVLKSFQSYPAPGYIS*
Ga0066665_110806071	3300006796	Soil	HVMLDQTGDWTITAGLSVLSDRLLSLTRSLEDLGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQASSVPSYIG*
Ga0066659_114544121	3300006797	Soil	GDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG*
Ga0079221_106886792	3300006804	Agricultural Soil	MLDQTGDWTITAGLSLLSDRLVPLTKALDNLGFFQATEESGMVYHLWTSALNENHDNRITAEETLLRVLKSFQSHSSPGYIS*
Ga0099793_102361302	3300007258	Vadose Zone Soil	MLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALTEHYSDRSKAEETLLKVLKSFQASSVPSYIG*
Ga0099793_104719812	3300007258	Vadose Zone Soil	WTITACLSILSDRMLQLSRSLEELGFFQAAEQGGMVYHLWTSALKQHYSDRSKAEETLLKVLKSFQASSVPSYIG*
Ga0066710_1000655064	3300009012	Grasslands Soil	MLDEAGDWTITAGLSVLSDRLLSLSRALEDLGFFQATEQAGMVYHLWTSTLHEDRDNRNIAEETLLRVLKSFQSYPAPGYIS
Ga0066710_1030227111	3300009012	Grasslands Soil	GSISLTFSDGIIHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHDSDRSKAEETLLRVLKSFQSSTIPSYIG
Ga0099829_103016391	3300009038	Vadose Zone Soil	TFSDGIIHVMLDQTGDWTITAGLSVLSDRLSSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLRSFQASSVPSYIG*
Ga0099829_103458751	3300009038	Vadose Zone Soil	TFSDGIIHVMLDQTGDWTITAGLSVLSDRLSSLTRSLEELGFFEAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLRSFQASAVPSYIG*
Ga0099830_100247726	3300009088	Vadose Zone Soil	AGLSILSDRLLPLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYAERSKAEETLLRVLKSFQSFSVPSYIG*
Ga0066709_1004270282	3300009137	Grasslands Soil	AFSDGVVHVMLDQTGDWTITAGLSVLSDRLLPLTRALEDLGFFQATEQAGMVYHLWTSALHEDHENRNNAEETLLRVLISFQSHSTPSYIG*
Ga0134082_102531722	3300010303	Grasslands Soil	DGIVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEDLGFFQAAEQGGMVYHLWTSALKEHYSDRSEAEETLLRVLKSFQASSVPSYIG*
Ga0134088_100087404	3300010304	Grasslands Soil	MLDQTGDWTITAGLSVVSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSSVPSYIG*
Ga0134086_101626311	3300010323	Grasslands Soil	DGIVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEDLGFFQAAEQGGMVYHLWTSALKEHYADRSKAEETLLRVLKSFQSSVVPSYIG*
Ga0134064_100520193	3300010325	Grasslands Soil	WTITAGLSVLSDRLVPLTKALEDLGFFQATEQSGMIYHLWTSALHEDHENRNIAEETLLRVLKSFQSHPAPGYIS*
Ga0134065_101505813	3300010326	Grasslands Soil	DWTITAGLSVLSDRLVPLTKALEDLGFFQATEEAGIVYHLWTSALHEDHENRNIAEETLLRVLKSFQSHPAPGYIS*
Ga0134080_100703181	3300010333	Grasslands Soil	TAGLSVLSDRLVPLTRALEDIGFFQATEQAGMVYHLWTSALDQDSDNRNLAEETLLKVLKSFQSHSAPTYIG*
Ga0134080_105745001	3300010333	Grasslands Soil	QTGDWTITAGLSVVSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG*
Ga0134062_101928801	3300010337	Grasslands Soil	WTITACLSVLSDRLLSLTRSLEEPGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTIPSYIG*
Ga0137391_108686532	3300011270	Vadose Zone Soil	TITAGLSILSDRMLQLSRSLEELGFFQAAEQGGMVYHIWTSALKEHYSDRSIAEETLLRVLKSFQATSVPSYIG*
Ga0137364_102607153	3300012198	Vadose Zone Soil	ISLTFSDGIVHVMLDQTGDWTITAGLSVVSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSVVPSYIG*
Ga0137364_112889131	3300012198	Vadose Zone Soil	SLTFSDGIVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQASTVPSYIG*
Ga0137383_104704812	3300012199	Vadose Zone Soil	AGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQASTVPSYIG*
Ga0137365_102062233	3300012201	Vadose Zone Soil	SDGIVHVMLDQTGDWTITAGLSVVSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSEAEETLLRVLKSFQSSTVPSYIG*
Ga0137380_113132821	3300012206	Vadose Zone Soil	VMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQATEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQTSSVPSYIG*
Ga0137381_107027061	3300012207	Vadose Zone Soil	SLTFSDGIVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHDSDRSKAEETLLRVLKSFQSSTVPSYIG*
Ga0137378_107565521	3300012210	Vadose Zone Soil	VISLAFSDGVLHVMLDQTGEWTITAGLSVGSDRLLSLTRALEDLGFFQAAEQAGMVYHLWTSALREDHENRNIAEETLLKVLKSFQSHHSPNYIG*
Ga0137377_108175853	3300012211	Vadose Zone Soil	TLDQTGDWTITAGLSVLSDRLVPLTRALEALGFFHATEQSGMIYHLWTSALHEDHENRNIAEETLLRVLKSFQSHPAPGYIS*
Ga0137387_103704301	3300012349	Vadose Zone Soil	IVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQATEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQTSSVPSYIG*
Ga0137386_102428961	3300012351	Vadose Zone Soil	ISLTFSDGIVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG*
Ga0137366_109436602	3300012354	Vadose Zone Soil	LSVGSDRLLSLTRALEDLGFFQAAEQAGMVYHLWTSALREDHENRNIAEETLLKVLKSFQSHSAPKYIG*
Ga0137371_103361281	3300012356	Vadose Zone Soil	SDGVVHVTLDQTGDWTITAGLSVLSDRLVPLTKALEDLGFFQATEQSGMIYHLWTSALHEDHENRNIAEETLLRVLKSFQSHPAPGYIS*
Ga0137371_109274651	3300012356	Vadose Zone Soil	DWTITAGLSVLSDRLLSLTRSLEELGFFQATEQEGMVYHLWTSALKEHYSNRSTAEETLLRDLKSIQTSTIPSYIG*
Ga0137385_100507375	3300012359	Vadose Zone Soil	LAFTDGVVHVMLDQSGDWTITAGLSVVSDRLLPLTRALEDIGFFQSTEQAGMVYHLWTSALHEGQDNRNIAEETLLRVLKSFQSHPAPGYIS*
Ga0134042_11492932	3300012373	Grasslands Soil	MANLVALTFSDGIVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEDLGFFQAAEQGGMVYHLWTSALKEHDSDRSKAEETLLRVLKSFQSSTVPSYIG*
Ga0137394_105869821	3300012922	Vadose Zone Soil	MLDQTGDWTITAGLSILSDRMLQLSRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSTAEETLLRVLKSFQASSVPRYIG*
Ga0137419_117173001	3300012925	Vadose Zone Soil	FSDGIVHVMLDQTGDWTITAGLSILSDRMLQLSRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSTAEETLLGVLKSFQTSSVPSYIG*
Ga0134077_101302271	3300012972	Grasslands Soil	SLGFSDGVIHVMLDQAGDWTITAGLSVLSDRLVPLTRALEDIGFFQATEQAGMVYHLWTSVLHQDSDERNIAEETLLRVLRSFQSHYSPTYIG*
Ga0134077_103778282	3300012972	Grasslands Soil	PGGSISLTFSDGIVHVMLDRRGDWTITAGLSVLSDRLLSLTRSLEEMGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQASYVPIYIG*
Ga0134076_100536852	3300012976	Grasslands Soil	MLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG*
Ga0134087_101482511	3300012977	Grasslands Soil	DGIVHVMLDQTGDWTITAGLSVVSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG*
Ga0134087_102007921	3300012977	Grasslands Soil	LSDRLVPLTKALEDLGFFQATEQSGVIYHLWTSALHEDHESRNIAEETLLRVLKSFQSHPAPGYIS*
Ga0134081_101928861	3300014150	Grasslands Soil	VMLDQTGDWTITAGLSILSDRMLQLSRSLEELGFFQAAEQGGMVYHLWTSALHEDHESRNGAEATLLRVLKSFQSHSAPSYIG*
Ga0134075_105055981	3300014154	Grasslands Soil	MLDEAGDWTITAGLSVLSDRLLSLSRALEDLGFFQATEQAGMIYHLWTSALHEDHENRNIAEETLLRVLKSFQ
Ga0134089_103660892	3300015358	Grasslands Soil	MLDEAGDWTITAGLSVLSDRLLSLSRALEDLGFFQATEQAGMIYHLWTSALHEDHENRNIAEETLLRVLKSFQSHPAPGY
Ga0134089_104252741	3300015358	Grasslands Soil	MLDQTGDWTITAGLSILSDRMLQLSRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSIAEETLLRVLKSFQASSLPSYIG*
Ga0134069_11881451	3300017654	Grasslands Soil	VMLDQAGDWTITAGLSVLSDRLVPLTRALEDIGFFQATEQAGMVYHLWTSALDQDSDNRNLAEETLLKVLKSFQSHSAPTYIG
Ga0134112_100114371	3300017656	Grasslands Soil	SLCFSDGVVNVMLDQTGDWTITAGLSVLSDRLLSLSRELEDLGFFQAAEHAGMVYHLWTSALHEDHESRNGAEATLLRVLKSFQSHSAPSYIG
Ga0134074_11434441	3300017657	Grasslands Soil	PGGAISLGFSDGVIHVMLDQAGDWTITAGLSVLSDRLVPLTRALEDIGFFQATEQAGMVYHLWTSALDQDSDNRNLAEETLLKALKSFQSHSAPTYIG
Ga0134074_11589442	3300017657	Grasslands Soil	PGGAISLGFSDGVIHVMLDQAGDWTITAGLSVLSDRLVPLTRALEDIGFFQATEQAGMVYHLWTSVLHQDSDERNIAEETLLRVLRSFQSHYSPTYIG
Ga0134083_101623982	3300017659	Grasslands Soil	MLDEAGDWTITAGLSVLSDRLLSLSRALEDLGFFQATEQAGMIYHLWTSALHEDHENRNIAEETLLRVLKSFQSHPAPGYIS
Ga0215015_102102732	3300021046	Soil	SVLSDRFLSLTRSLEDLGFFQAAEQEGMIYHLWTSALKEHYADRSTAEETLLRVLRSFQASSVPGYIR
Ga0209468_10560163	3300026306	Soil	AGLSVVSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSSVPSYIG
Ga0209055_11117132	3300026309	Soil	LDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG
Ga0209268_10002981	3300026314	Soil	MLDQAGDWTITAGLSVLSDRLVPLTRALEDIGFFQATEQAGMVYHLWTSALDQDSDNRNLAEETLLKALKSFQSHSAPTYIG
Ga0209801_10446421	3300026326	Soil	LDQTGDWTITAGLSVVSDRLLSLTRSLEELGFFQAAEQGGIVYHLWTSALKEHYADRSKAEETLLRVLKSFQSSTVPSYIG
Ga0209266_11377561	3300026327	Soil	GSISLTFSDGIVHVMLDQTGDWTITAGLSVVSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSSVPSYIG
Ga0209375_10542213	3300026329	Soil	DGIIHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHDSDRSKAEETLLRVLKSFQSSTIPSYIG
Ga0209267_11417824	3300026331	Soil	TAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG
Ga0209803_10021441	3300026332	Soil	GIVHVMLDQTGDWTITAGLSVLSDRLLPLTRSLEELGFFQAAEQGGMVYHLWTSALREHYSGRSKAEETLLRVLKSFQTSSVPSYIG
Ga0209158_10242923	3300026333	Soil	MDTVEPSDGIVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEDLGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG
Ga0209158_12019832	3300026333	Soil	DWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSTTVPSYIG
Ga0209158_13033872	3300026333	Soil	VHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQASSVPSYIG
Ga0209804_11542271	3300026335	Soil	DQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHDSDRSKAEETLLRVLKSFQSSTVPSYIG
Ga0209159_12034322	3300026343	Soil	GGIISLTFSDGIVHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEDLGFFQAAEQGGMVYHLWTSALKEHYSDRSEAEETLLRVLKSFQSSVVPSYIG
Ga0209159_12277251	3300026343	Soil	VDSSLRPGGAISLAFSDGVVHVTLDQTGDWTITAGLSVLSDRLVPLTKALEDLGFFQATEQSGMIYHLWTSALHEDHENRNIAEET
Ga0209159_12297872	3300026343	Soil	HLMLDQSGDWTITAGLSVVSDRLLPLTRALEDLGFFQATEEAGIVYHLWTSALHEDQDNRNIAEETLLRVLKSFQSHSAPSYIG
Ga0257181_10112221	3300026499	Soil	GSISLTFSDGIIHVMLDQTGDWTITAGLSVLSDRLSSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLRSFQASSVPSYIG
Ga0209690_11949051	3300026524	Soil	GIIHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG
Ga0209160_10135011	3300026532	Soil	DGIVHVMLDQTGDWTITAGLSVVSDRLLSLTRSLEELGFFQAAEQGGIVYHLWTSALKEHYADRSKAEETLLRVLKSFQSSTVPSYIG
Ga0209157_11543721	3300026537	Soil	SDGIIHVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG
Ga0209056_105207111	3300026538	Soil	VMLDQTGDWTITAGLSVLSERLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHDSDRSKAEETLLRVLKSFQSSTIPSYIG
Ga0209376_12581291	3300026540	Soil	FSDGVVHVMLDEAGDWTITAGLSVLSDRLLSLSRALEDLGFFQATEQAGMIYHLWTSALHEDHENRNIAEETLLRVLKSFQSYPAPGYIS
Ga0209805_13643532	3300026542	Soil	PGGSISLTFSDGIVHVMLDQSGDWTITAGLSVLSDRLLPLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYADRSKAEETLLRVLKSFQSSSVPNYIG
Ga0209156_101028981	3300026547	Soil	RPGGAISLAFSDGVVHVTLDQTGDWTITAGLSVLSDRLVPLTKALEDLGFFQATEQSGVIYHLWTSALHEDHENRNIAEETLLRVLKSFQSHPAPGYIS
Ga0209156_104286551	3300026547	Soil	ITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLKSFQSSTVPSYIG
Ga0209689_13412122	3300027748	Soil	HVMLDQTGDWTITAGLSVLSDRLLSLTRSLEELGFFQAAEQGGMVYHLWTSALKKHDSDRSKAEETLLRVLKSFQSSTIPSYIG
Ga0209580_100012632	3300027842	Surface Soil	MLDQTGDWTITAGLSLLSDRLAPLTKALDNLGFFQATEESGMVYHLWTSALDENHDNRITAEETLLRVLKSFQSHSSPGYIS
Ga0209701_100955911	3300027862	Vadose Zone Soil	VMLDQTGDWTITAGLSVLSDRLSSLTRSLEELGFFQAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLRSFQASSVPSYIG
Ga0209701_102717001	3300027862	Vadose Zone Soil	VMLDQTGDWTITAGLSVLSDRLSSLTRSLEELGFFEAAEQGGMVYHLWTSALKEHYSDRSKAEETLLRVLRSFQASAVPSYIG
Ga0307479_102706341	3300031962	Hardwood Forest Soil	DQTGDWTITAGLSVLSDRLLSLTRSLEKLGFFQAAEQGGVIYHLWTSALKEHYSDRNKAEEILLGVLKSFQGSSVPSYIG
Ga0307471_1005266222	3300032180	Hardwood Forest Soil	GGSISLTFSDGIIHVMLDQAGDWTITAGLSILSDRIMQLSRSLEELGFFQAAEQGGMIYHLWTSALKEHYADRSTAEETLLRVLKSFQASSFPRYIG
Ga0307472_1023006401	3300032205	Hardwood Forest Soil	DQTGDWTITAGLSILSDRMMQLSRSLEELGFFQAAEQGGMVYHLWTSALKEHYTDRSTAEETLLRVLKSFQASSVPNYIG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082429

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences