Metagenome / Metatranscriptome Family F082415

Basic Information
Family ID	F082415
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	46 residues
Representative Sequence	KNGNPAGRLNKIILADGSELHDTQLGGDAGGKTRYDPDADVKK
Number of Associated Samples	101
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.68 %
% of genes near scaffold ends (potentially truncated)	95.58 %
% of genes from short scaffolds (< 2000 bps)	92.92 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Most Common Taxonomy
Group	Bacteria (99.115 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (9.735 % of family members)
Environment Ontology (ENVO)	Unclassified (32.743 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.938 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 8.45% Coil/Unstructured: 91.55%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13531	SBP_bac_11	7.96
PF13620	CarboxypepD_reg	0.88
PF01799	Fer2_2	0.88
PF00005	ABC_tran	0.88
PF06594	HCBP_related	0.88
PF02276	CytoC_RC	0.88
PF02738	MoCoBD_1	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2931	Ca2+-binding protein, RTX toxin-related	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.31 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.42 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.88 %
Novosphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Novosphingobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium	0.88 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Novosphingobium sp. Rr 2-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. Rr 2-17	0.88 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Unclassified	root	N/A	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_11629275	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300000559\|F14TC_101039783	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300000559\|F14TC_101039861	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300000956\|JGI10216J12902_106262157	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300000956\|JGI10216J12902_120550170	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300004157\|Ga0062590_102322788	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300004479\|Ga0062595_101844402	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300004635\|Ga0062388_101187051	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300004803\|Ga0058862_12541210	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005328\|Ga0070676_10712063	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300005331\|Ga0070670_101246603	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005365\|Ga0070688_100212128	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300005406\|Ga0070703_10022293	All Organisms → cellular organisms → Bacteria	1858	Open in IMG/M
3300005440\|Ga0070705_100006513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. Rr 2-17	5731	Open in IMG/M
3300005440\|Ga0070705_100027434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3109	Open in IMG/M
3300005445\|Ga0070708_100218702	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300005518\|Ga0070699_101356771	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300005529\|Ga0070741_11370725	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300005535\|Ga0070684_100366639	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300005545\|Ga0070695_100664212	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300005545\|Ga0070695_100866371	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300005546\|Ga0070696_100332886	All Organisms → cellular organisms → Bacteria → Proteobacteria	1171	Open in IMG/M
3300005546\|Ga0070696_101201798	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300005555\|Ga0066692_10987851	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005556\|Ga0066707_10671911	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300005564\|Ga0070664_100139125	All Organisms → cellular organisms → Bacteria	2137	Open in IMG/M
3300005713\|Ga0066905_100718869	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300005713\|Ga0066905_101656613	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005764\|Ga0066903_103888953	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005842\|Ga0068858_101535330	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300006049\|Ga0075417_10742590	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300006797\|Ga0066659_10244114	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300006806\|Ga0079220_10604963	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300006852\|Ga0075433_11253803	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300006853\|Ga0075420_100007580	All Organisms → cellular organisms → Bacteria	9584	Open in IMG/M
3300006903\|Ga0075426_10378549	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300007004\|Ga0079218_11193342	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300009012\|Ga0066710_103061910	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300009090\|Ga0099827_10127580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2056	Open in IMG/M
3300009100\|Ga0075418_10661521	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300009100\|Ga0075418_12718330	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300009100\|Ga0075418_13105891	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300009156\|Ga0111538_10643905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1344	Open in IMG/M
3300009162\|Ga0075423_11733144	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300009409\|Ga0114993_10523879	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300009609\|Ga0105347_1387395	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300009610\|Ga0105340_1558884	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300009804\|Ga0105063_1054373	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300010358\|Ga0126370_11373299	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300010362\|Ga0126377_12388733	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300010373\|Ga0134128_12292358	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300010400\|Ga0134122_11673912	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300010401\|Ga0134121_12117876	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300010403\|Ga0134123_11025323	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300010403\|Ga0134123_12693347	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300011405\|Ga0137340_1065685	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300011434\|Ga0137464_1120301	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300012189\|Ga0137388_11884596	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300012228\|Ga0137459_1167019	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300012672\|Ga0137317_1025742	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300012907\|Ga0157283_10284700	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300012922\|Ga0137394_10234802	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300012922\|Ga0137394_10901476	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300012944\|Ga0137410_10633981	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300013297\|Ga0157378_11208855	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300014166\|Ga0134079_10176347	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300014864\|Ga0180068_1067240	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300014875\|Ga0180083_1017810	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300014878\|Ga0180065_1122547	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300014880\|Ga0180082_1005003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2598	Open in IMG/M
3300015373\|Ga0132257_102745791	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300015374\|Ga0132255_101267856	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300017822\|Ga0187802_10436975	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300018071\|Ga0184618_10229643	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300018429\|Ga0190272_12509570	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300018468\|Ga0066662_12024404	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300018469\|Ga0190270_11440985	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300019229\|Ga0180116_1335423	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300020065\|Ga0180113_1206225	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300020583\|Ga0210401_11253251	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300021081\|Ga0210379_10135449	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300021082\|Ga0210380_10518179	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
(restricted) 3300024059\|Ga0255040_10474706	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300025917\|Ga0207660_11341605	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300025922\|Ga0207646_10201468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1798	Open in IMG/M
3300025925\|Ga0207650_11854029	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300025936\|Ga0207670_10900931	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300025945\|Ga0207679_10121928	All Organisms → cellular organisms → Bacteria	2077	Open in IMG/M
3300025949\|Ga0207667_12144846	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300027533\|Ga0208185_1095429	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300027835\|Ga0209515_10284963	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300027835\|Ga0209515_10288359	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300027842\|Ga0209580_10200717	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300027880\|Ga0209481_10208089	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300028381\|Ga0268264_12054527	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300028713\|Ga0307303_10195545	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300028784\|Ga0307282_10519406	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300028863\|Ga0302218_10119097	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300029944\|Ga0311352_10648267	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300031236\|Ga0302324_101570852	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300031548\|Ga0307408_100670932	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300031719\|Ga0306917_11483103	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300031824\|Ga0307413_11371455	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300031912\|Ga0306921_11430568	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300031940\|Ga0310901_10140721	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300031949\|Ga0214473_11236996	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300031954\|Ga0306926_12821276	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300032119\|Ga0316051_1006747	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300032126\|Ga0307415_101118425	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300032205\|Ga0307472_102395598	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300033004\|Ga0335084_12324131	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300033433\|Ga0326726_11812594	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.88%
Host-Associated	Host-Associated	22.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.41%
Plants	Host-Associated → Plants	21.24%
Aquatic	Environmental → Aquatic	19.47%
Human	Host-Associated → Human	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.81%
Sediment	Environmental → Aquatic → Sediment	10.62%
Freshwater	Environmental → Aquatic → Freshwater	7.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.42%
Peat	Environmental → Terrestrial → Peat	3.54%
Marine	Environmental → Aquatic → Marine	1.77%
Digestive System	Host-Associated → Human → Digestive System	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.40%
Loam	Environmental → Terrestrial → Soil → Loam	17.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.77%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.77%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.89%
Strait	Environmental → Aquatic → Marine → Strait	0.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Sand	Environmental → Terrestrial → Soil → Sand	0.89%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.54%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.65%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.89%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	9.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.42%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.65%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.65%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.77%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.89%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.89%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012672	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT266_2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014864	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231A'_16_10D	Environmental	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300014878	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10D	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300024059 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032119	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_116292751	3300000550	Soil	AKNGNPAGRLQKIILADGSELRDTQLGGDAPKTRFDPEAGR*
F14TC_1010397831	3300000559	Soil	YVAKNGNPAGRLNKIILADGSELHDTQLGGDAGGKTRYDPDADTSKK*
F14TC_1010398612	3300000559	Soil	VAKNGNPAGRLQKIILADGSELRDTQLGGDAPKTRFDPEAGR*
JGI10216J12902_1062621572	3300000956	Soil	PGDVITVRMYVAKNGNPAGRLQKIILADGSELHDTQLGGDEGGKSRYDPFAGK*
JGI10216J12902_1205501702	3300000956	Soil	VRMYVAKNGNPAGRLQKIVLADGSELRDTQLGGDAPKTRYDPFAEPEKK*
Ga0062590_1023227882	3300004157	Soil	VTISMYATTNGNPVGRLNKITLADGTVLHDTQLGGDAGNKTSYDPNAEPTKK*
Ga0062595_1018444022	3300004479	Soil	TVRMYLAKNGNPAGRLNKIILADGSELHDTQLGGDSGGKSRYDPDAK*
Ga0062388_1011870511	3300004635	Bog Forest Soil	SVFLYPSKSGSPAGRLNKLVLADGTILHDTQLGGDGGGKTRYDPNADKAAPKQ*
Ga0058862_125412101	3300004803	Host-Associated	AAGDKITVRMYLAKNGNPAGRLQKIVLADGSELHDTQLGGDEGGKSRYDPDAAPKK*
Ga0070676_107120631	3300005328	Miscanthus Rhizosphere	AGDKITVRMYLAKNGNPAGRLQKIVLADGSELHDTQLGGDEGGKSRYDPDAAPKK*
Ga0070670_1012466032	3300005331	Switchgrass Rhizosphere	RMYVAKNGNPAGRLNKIILADGSELHDTQLGGDAGGKTRYDPDADTSKK*
Ga0070688_1002121283	3300005365	Switchgrass Rhizosphere	MYLAKNGNPAGRLNKIVLADGSELHDTQLGGDAGGKSRYDPDADVKK*
Ga0070703_100222931	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	ITVRMYVAKNGNAAGRLQKIILADGSELHDTQLGGDEGGKSRYDPDAAPKK*
Ga0070705_1000065139	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RMYVSKNGNPAGRLNKIILADGTELHDTQLGGDEGGKTRYDPDAKK*
Ga0070705_1000274344	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RMYVAKNGNPAGRLNKFILADGSELHDTQLGGDAGGKSRYDPDADTKK*
Ga0070708_1002187023	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GDVVTVRMYVAKNGNPAGRLNKIILADGSELHDTQLGGDAGGKSRYDPDAESGKK*
Ga0070699_1013567711	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VTVRMYVAKNGNPAGRLNKIIFADGSELHDTQLGGDAGGKTRYDPDAK*
Ga0070741_113707251	3300005529	Surface Soil	RLNKIIMKDGTELHDTQLGGDAGGKTRYDPDAAK*
Ga0070684_1003666393	3300005535	Corn Rhizosphere	MYLAKNGNPAGRLNKIILADGSELHDTQLGGDAGGKSRYDPDAEKK*
Ga0070695_1006642121	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	SLAPGDEVTLRVYMAKTGNPAGRLNKIILKDGTELHDTQLGGDADGKTSYTIPSQ*
Ga0070695_1008663711	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	NPAGRLKKIVLADSSELHDMQLGGDTGGKTRYDPDPDVTK*
Ga0070696_1003328861	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTGNRRVTFVAKNRNPAGRLKKIVLADSSELHDMQLGGDTGGKTRYDPDPDVKK*
Ga0070696_1012017982	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RMYVAKNGNPAGRLQKIILADGSELHDTQLGGDAGGKTRYDPDVK*
Ga0066692_109878511	3300005555	Soil	AAKNGNPAGRLNKIVLADGTVLHDTQLGGDAGNKTGYDPNADPKNK*
Ga0066707_106719111	3300005556	Soil	MPGDVITVRMYVAKNGNPAGRLQKIILADGSELHDTQLGGDAGGKTRYDPDADTGKK*
Ga0070664_1001391254	3300005564	Corn Rhizosphere	LQKIILADGSELHDTQLGGDEGGKTRYDPDAAPKK*
Ga0066905_1007188691	3300005713	Tropical Forest Soil	TVRMYVAKNGNPAGRLNKIILADGSELHDTQLGGDEGGKTRYDPDAAKK*
Ga0066905_1016566131	3300005713	Tropical Forest Soil	ITVRMYVAKNGNPAGRLNKIILADGSELHDTQLGGDAGGKSRYDPDAESTKK*
Ga0066903_1038889532	3300005764	Tropical Forest Soil	GRLNKIVLSDGSELHDTQLGGDGGNKSGYGPDAGPRNR*
Ga0068858_1015353302	3300005842	Switchgrass Rhizosphere	SVAPGDMITVRMYLAKNGNPAGRLNKIVLADGSELHDTQLGGDAGGKSRYDPDADVKK*
Ga0075417_107425901	3300006049	Populus Rhizosphere	ITVRMYVSKNGNPAGRLNKIILADGSELHDTQLGGDAGGKTRYDPDAGK*
Ga0066659_102441141	3300006797	Soil	KNGNPAGRLQKIILADGTELHDTQLGGDAGGKTRFDPDADSGKK*
Ga0079220_106049631	3300006806	Agricultural Soil	TPGDVVSVTMYAAKNGNPAGRLNKIILADGSVLHDTQLGGDEGNKTGYGPDAGSRNR*
Ga0075433_112538032	3300006852	Populus Rhizosphere	MITVRMYVAKNGNPAGRLNKIILADGSELHDTQLGGDEGGKSRYDPDAAKK*
Ga0075420_10000758011	3300006853	Populus Rhizosphere	NGNPAGRLQKIILADGSELRDTQLGGEAPKTRFDPEAGK*
Ga0075426_103785491	3300006903	Populus Rhizosphere	RMYVAKTGNPVGRLNKIILADRSELHDTQLGGDAGGKSRYDPDADVKK*
Ga0079218_111933422	3300007004	Agricultural Soil	ITVFMYVAKNGNPAGRLQKLVLADGSELRDTQLGGDAPKTRYDPDAGK*
Ga0066710_1030619101	3300009012	Grasslands Soil	VRMYVAKNGNPAGRLQKIILADGSELHDTQLGGDAGGKTRFDPDADSGKK
Ga0099827_101275801	3300009090	Vadose Zone Soil	DAIAPGDVITVRMYVAKNGNPAGRLNKIILADGSELHDTQLGGDAGGKSRYDPDAK*
Ga0075418_106615211	3300009100	Populus Rhizosphere	PGDVITVRMYVSKNGNPAGRLQKIILADGSELHDTQLGGDEGGKSRYDPDAESGKK*
Ga0075418_127183301	3300009100	Populus Rhizosphere	AKNGNPAGRLQKIILADGSELHDTQLGGDEGGKTRYDPDAAPKK*
Ga0075418_131058912	3300009100	Populus Rhizosphere	NKIILADGSELHDTQLGGDAGGKTRYDPDADTGKK*
Ga0111538_106439051	3300009156	Populus Rhizosphere	PAGRLNKIILADGSELHDTQLGGDAGGKSRYDPDAETGKK*
Ga0075423_117331442	3300009162	Populus Rhizosphere	GNPAGRLQKIILADGSELHDTQLGGDAGGKTRFNPDADSGKK*
Ga0114993_105238791	3300009409	Marine	VITVRMYVAKNGNPAGRLQKVVFADGTELHDTQLGGDEGGKSRYDPYGFRG*
Ga0105347_13873952	3300009609	Soil	AGRLNKIILADGSELHDTQLGGDAGGKTRYDPDADVKK*
Ga0105340_15588841	3300009610	Soil	GNPAGRLNKIVLKDGTVLRDTQLGGEAGNKTGYDPNADPTKK*
Ga0105063_10543731	3300009804	Groundwater Sand	KNGNPAGRLQKIILADGSELRDTQLGGDAPKTRFDPEAGR*
Ga0126370_113732992	3300010358	Tropical Forest Soil	KNGNPAGRLNKIVLSDGSELHDTQLGGDGGNKTGYGPDAGQRNR*
Ga0126377_123887332	3300010362	Tropical Forest Soil	GRLNKIILKDGTELHDTQLGGDADGKTSYDPPSQ*
Ga0134128_122923582	3300010373	Terrestrial Soil	MHRSIAAPGRLNKIILADGSELHDTQLGGDAGGKTRYDPDADVKK*
Ga0134122_116739122	3300010400	Terrestrial Soil	GRLNKIIMADGSELHDTQLGGDSGGKSRYDPDAK*
Ga0134121_121178761	3300010401	Terrestrial Soil	KNGNPAGRLQKIILADGSELHDTQLGGDEGGKTRFVPGAESGQK*
Ga0134123_110253232	3300010403	Terrestrial Soil	MYVSKNGNPAGRLNKIILADGSELHDTQLGGDAGGKTRYDPDVK*
Ga0134123_126933471	3300010403	Terrestrial Soil	MYLAKNGNPAGRLQKIILADGSELHDTQLGGDEGGKTRYDPDAAPKK*
Ga0137340_10656852	3300011405	Soil	WRLPKIILADGSELNDTQLGGDAAGKTRYDPDADVKK*
Ga0137464_11203011	3300011434	Soil	KNGNPAGRLNKIILADGSELHDTQLGGDAGGKTRYDPDADVKK*
Ga0137388_104306151	3300012189	Vadose Zone Soil	IYAAKTGNPAGRLNRVVLADGTTLHDTQLGGDAGNKTGYGHDTGANRGNEGK*
Ga0137388_118845961	3300012189	Vadose Zone Soil	GNPAGRLQKIILADGSELHDTQLGGDAGGKTRYDPDADTGKK*
Ga0137459_11670192	3300012228	Soil	ITVRMYVSKNGNPAGRLNKIILADGSELHDTQLGGDAGGKTRYDPDADVKK*
Ga0137317_10257421	3300012672	Soil	RMYVSKNGNPAGRLQKIIFADGTDLHDTQLGGDEGGKTRYDPLAGK*
Ga0157283_102847001	3300012907	Soil	RLQKIVLADGSELHDTQLGGDEGGKSRYDPDAAPKK*
Ga0137394_102348023	3300012922	Vadose Zone Soil	TVMPGDVITVRMYVAKNGNPAGRLQKIILADGSELHDTQLGGDAGGKTRFDPDADSGKK*
Ga0137394_109014761	3300012922	Vadose Zone Soil	NPAGRLNKIILADGSELHDTQLGGDEGGKTRYDPDAKK*
Ga0137410_106339812	3300012944	Vadose Zone Soil	PGDVVTVRMYLAKNGNPAGRLNKIILADGSELHDTQLGGDAGGKTRYDPDAEPKK*
Ga0157378_112088552	3300013297	Miscanthus Rhizosphere	VVTVRMYVAKNGNPAGRLNKIILKDGSELHDTQLGGDEGGKTRYDPDAVKK*
Ga0134079_101763472	3300014166	Grasslands Soil	VTVRMYVAKNGNPAGRLNKIILADGSELHDTQLGGDAGGKTRYDPDAK*
Ga0180068_10672401	3300014864	Soil	TVRMYVSKNGNPAGRLQKIIFADGTDLHDTQLGGDEGGKTRYDPLAGK*
Ga0180083_10178101	3300014875	Soil	GRLNKIILADGSELHDTQLGGDAGGKTRYNPDADVKK*
Ga0180065_11225472	3300014878	Soil	IILADGSDLHDTQLGGDAGGKTRYDPEADPDNKK*
Ga0180082_10050034	3300014880	Soil	NKIILADGSELHDTQLGGDAGGKTRYDPDADVKK*
Ga0132257_1027457911	3300015373	Arabidopsis Rhizosphere	NPAGRLNKIILEDGSELHDTQLGGDKGGKSRYDPDAESKK*
Ga0132255_1012678562	3300015374	Arabidopsis Rhizosphere	YVSKNGNPAGRLNKIILADGTELHDTQLGGDEGGKTRYDPDAKK*
Ga0187802_104369752	3300017822	Freshwater Sediment	PAGRMNKIVLPDGTTLHDTQLGGDGGKSRYNPDADSKSQKPNQ
Ga0184618_102296431	3300018071	Groundwater Sediment	KNGNPAGRLQKIILADGSELHDTQLGGDAGGKTRYDPDADIGKK
Ga0190272_125095702	3300018429	Soil	VVKNGNNAGRLQKIVLADGSELRDTQLGGDAPKTRFDPFAEKEKK
Ga0066662_120244041	3300018468	Grasslands Soil	NGNPAGRLNKVVLSDGSVLHDTQLGGDAGNKSDYRPDDYSKEKK
Ga0190270_114409851	3300018469	Soil	PGDVITVRMYVAKNGNPAGRLQKIILADGSELRDTQLGGDAPKTRFDPEAVK
Ga0180116_13354231	3300019229	Groundwater Sediment	WRLQKIILADGSELNDTQLGGDAAGKTRYDPDADVKK
Ga0180113_12062251	3300020065	Groundwater Sediment	PAGRLNKIILADGSELHDTQLGGDAGGKTRYDPDADVKK
Ga0210401_112532511	3300020583	Soil	IYPAKSGNPAGRLNRIVLPDGTTLHDTQLGGEGGKGRYNPGGDADSKKAKP
Ga0210379_101354491	3300021081	Groundwater Sediment	SKNGNPAGRLNKIILADGSELHDTQLGGDAGGKTRYDPDADVKK
Ga0210380_105181792	3300021082	Groundwater Sediment	MYVAKNGNPAGRLNKITLADGTELRDTQLGGEEGGKTRYDPFAESGK
(restricted) Ga0255040_104747061	3300024059	Seawater	GRLNKIIFADGTELHDTQLGGDEGGKSRYDPHGFRN
Ga0207660_113416051	3300025917	Corn Rhizosphere	ITVRMYVSKNDNPAGRLQKIVLADGSELRDTQLGGDAPKSRYDPDAGK
Ga0207646_102014682	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTGNRRVTFVAKNRNPAGRLKKIVLADSSELHDMQLGGDTGGKTRYDPDPDVKK
Ga0207650_118540292	3300025925	Switchgrass Rhizosphere	LAKNGNPAGRLQKIILADGSELHDTQLGGDEGGKTRYDPDAAPKK
Ga0207670_109009311	3300025936	Switchgrass Rhizosphere	ASVAPGDMITVRMYLAKNGNPAGRLNKIVLADGSELHDTQLGGDAGGKSRYDPDADVKK
Ga0207679_101219284	3300025945	Corn Rhizosphere	AGRLQKIILADGSELHDTQLGGDEGGKTRYDPDAAPKK
Ga0207667_121448462	3300025949	Corn Rhizosphere	KNGNPAGRLQKIVLADGSELHDTQLGGDEGGKSRYDPDAAPKK
Ga0208185_10954291	3300027533	Soil	VITVRMYVSKNGNPAGRLNKIILADGSELHDTQLGGDAGGKTRYDPDADVKK
Ga0209515_102849632	3300027835	Groundwater	MYAAKNGNPAGRLNKIVLADGTVLHDTQLGGDAGGKTGYDPDADPKKK
Ga0209515_102883592	3300027835	Groundwater	AKNGNPAGRLNKIILADGNELHDTQLGGDAGGKSRYDPDAK
Ga0209580_102007172	3300027842	Surface Soil	MYCSKNGNPAGRLNKIVLADGTELHDTVLGGESGGKTGYRPDDEPNGKK
Ga0209481_102080892	3300027880	Populus Rhizosphere	NGNPAGRLNKIILADGSELHDTQLGGDAGGKSRYDPDAETGKK
Ga0268264_120545272	3300028381	Switchgrass Rhizosphere	AGRLNKIILADGTELHDTQLGGDEGGKTRYDPDAKK
Ga0307303_101955451	3300028713	Soil	GRLQKIILADGSELHDTQLGGDAGGKTRFDPDADSGKK
Ga0307282_105194061	3300028784	Soil	DVVTVRMYVAKNGNPAGRLNKIILADGSELHDTQLGGDAGGKSRYDPDAK
Ga0302218_101190972	3300028863	Palsa	DVITVDMYVAKNGNPVGRLQKIVRADGTELHDTLLGGDAGGKTKYDPDGGK
Ga0311352_106482671	3300029944	Palsa	PGDVITVDMYVAKNGNPVGRLQKIVRADGTELHDTLLGGDAGGKTKYDPDGGK
Ga0302324_1015708522	3300031236	Palsa	NKIVRADGTELHDTILGGDAGGKTKYDPDAGKTDGGK
Ga0307408_1006709322	3300031548	Rhizosphere	PGDVITVRMYVSKNGNPAGRLQKIILADGSELHDTQLGGDEGGKSRYDPDADSGKK
Ga0306917_114831031	3300031719	Soil	AYMSKNGNPAGRLNKIVLSDGTELHDTQLGGDGGNKTGYGPDAGQRNR
Ga0307413_113714552	3300031824	Rhizosphere	KNGNNAGRLQKIVLADGTELRDTQLGGEAGGKTRFDPFAEKEKK
Ga0306921_114305681	3300031912	Soil	GNPAGRLNKVVLADGTVLHDTQLGGDSGGKTRYDPDAEPKKR
Ga0310901_101407211	3300031940	Soil	RMYLAKNGNPAGRLQKIILADGSELHDTQLGGDEGGKTRYDPDAAPKK
Ga0214473_112369962	3300031949	Soil	GNPAGRLNRIVLADGTILRDTQLGGDAGGKTRYDPDAEPSGQK
Ga0306926_128212761	3300031954	Soil	NGNPAGRLNKIVLADGTVLHDTQLGGDSGGKTRYDPDAEPKKK
Ga0316051_10067471	3300032119	Soil	LNKIVLTDGTTLHDTQLGGESGKARYNPDADSKSQKNNQ
Ga0307415_1011184252	3300032126	Rhizosphere	GDVITVRMYVAKNGNPAGRLQKIVLADGSELRDTQLGGDAPKTRFDPDAGK
Ga0307472_1023955981	3300032205	Hardwood Forest Soil	GNPAGRLNKIILSDGSELHDTQLGGDAGGKSRYDPDAETGKK
Ga0335084_123241311	3300033004	Soil	KNGNPAGRLNKIIMKDGTELHDTQLGGDAGGKTRYDPDAAK
Ga0326726_118125942	3300033433	Peat Soil	KNGNPAGRLNKIILADGSELHDTQLGGDEGGKTGYGPDAK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters