Metagenome / Metatranscriptome Family F082369

Overview

Basic Information

• Family ID: F082369
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 113
• Average Sequence Length: 49 residues
• Representative Sequence: ISFVGLKTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPTIDDSITT
• Number of Associated Samples: 90
• Number of Associated Scaffolds: 113

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 5.36 %
• % of genes near scaffold ends (potentially truncated): 92.04 %
• % of genes from short scaffolds (< 2000 bps): 96.46 %
• Associated GOLD sequencing projects: 86
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (82.301 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (25.664 % of family members)
• Environment Ontology (ENVO): Unclassified (76.991 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (66.372 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 23.38%
  Coil/Unstructured: 76.62%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF03237	Terminase_6N	3.54

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.96 %
Unclassified	root	N/A	15.04 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.30 %
Unclassified	root	N/A	15.04 %
Viruses	superkingdom	All Organisms → Viruses	2.65 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.30 %
Unclassified	root	N/A	15.04 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	0.88 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001282|B570J14230_10227133	All Organisms → cellular organisms → Bacteria	508
3300002294|B570J29584_1011212	Not Available	562
3300003277|JGI25908J49247_10086459	All Organisms → cellular organisms → Bacteria	767
3300003277|JGI25908J49247_10156899	Not Available	529
3300003388|JGI25910J50241_10069853	Not Available	1029
3300003388|JGI25910J50241_10184842	All Organisms → cellular organisms → Bacteria	529
3300003388|JGI25910J50241_10186904	All Organisms → cellular organisms → Bacteria	526
3300004693|Ga0065167_1103939	All Organisms → cellular organisms → Bacteria	501
3300005580|Ga0049083_10294291	All Organisms → cellular organisms → Bacteria	543
3300006802|Ga0070749_10751470	Not Available	519
3300006805|Ga0075464_10445694	All Organisms → cellular organisms → Bacteria	789
3300006805|Ga0075464_10931004	All Organisms → cellular organisms → Bacteria	543
3300006805|Ga0075464_10998579	All Organisms → cellular organisms → Bacteria	525
3300007363|Ga0075458_10090109	All Organisms → cellular organisms → Bacteria	956
3300007735|Ga0104988_10027	All Organisms → cellular organisms → Bacteria	10185
3300007992|Ga0105748_10386641	All Organisms → cellular organisms → Bacteria	602
3300008266|Ga0114363_1113958	All Organisms → cellular organisms → Bacteria	951
3300008339|Ga0114878_1150841	All Organisms → cellular organisms → Bacteria	833
3300009026|Ga0102829_1284782	All Organisms → cellular organisms → Bacteria	548
3300009068|Ga0114973_10683671	All Organisms → cellular organisms → Bacteria	523
3300009151|Ga0114962_10630699	All Organisms → cellular organisms → Bacteria	553
3300009152|Ga0114980_10027374	All Organisms → cellular organisms → Bacteria	3533
3300009152|Ga0114980_10543176	All Organisms → cellular organisms → Bacteria	659
3300009152|Ga0114980_10778954	All Organisms → cellular organisms → Bacteria	533
3300009152|Ga0114980_10837518	All Organisms → cellular organisms → Bacteria	510
3300009155|Ga0114968_10695104	All Organisms → cellular organisms → Bacteria	533
3300009158|Ga0114977_10682596	All Organisms → cellular organisms → Bacteria	548
3300009160|Ga0114981_10274410	All Organisms → cellular organisms → Bacteria	917
3300009161|Ga0114966_10698205	All Organisms → cellular organisms → Bacteria	556
3300009161|Ga0114966_10743401	All Organisms → cellular organisms → Bacteria	533
3300009163|Ga0114970_10629193	All Organisms → cellular organisms → Bacteria	575
3300009163|Ga0114970_10641560	Not Available	568
3300009163|Ga0114970_10765259	All Organisms → cellular organisms → Bacteria	510
3300009181|Ga0114969_10198327	All Organisms → cellular organisms → Bacteria	1234
3300009183|Ga0114974_10800701	All Organisms → cellular organisms → Bacteria	506
3300009433|Ga0115545_1169868	All Organisms → cellular organisms → Bacteria	754
3300010354|Ga0129333_11417237	All Organisms → cellular organisms → Bacteria	571
3300011984|Ga0119931_1037643	Not Available	580
3300011995|Ga0153800_1006595	All Organisms → cellular organisms → Bacteria	1103
3300012722|Ga0157630_1031663	All Organisms → cellular organisms → Bacteria	502
3300013004|Ga0164293_10657924	All Organisms → cellular organisms → Bacteria	675
3300013004|Ga0164293_10717869	All Organisms → cellular organisms → Bacteria	639
3300013004|Ga0164293_10990789	Not Available	525
3300013005|Ga0164292_10513621	All Organisms → cellular organisms → Bacteria	783
3300013005|Ga0164292_11038616	All Organisms → cellular organisms → Bacteria	510
3300013014|Ga0164295_11176646	All Organisms → cellular organisms → Bacteria	595
3300013295|Ga0170791_11040875	All Organisms → cellular organisms → Bacteria	545
3300017700|Ga0181339_1012653	All Organisms → cellular organisms → Bacteria	977
3300017701|Ga0181364_1025403	All Organisms → cellular organisms → Bacteria	966
3300017707|Ga0181363_1043209	All Organisms → cellular organisms → Bacteria	823
3300017722|Ga0181347_1197464	All Organisms → cellular organisms → Bacteria	530
3300017723|Ga0181362_1100980	All Organisms → cellular organisms → Bacteria	573
3300017747|Ga0181352_1151833	All Organisms → cellular organisms → Bacteria	613
3300017747|Ga0181352_1157526	Not Available	598
3300017747|Ga0181352_1176152	All Organisms → cellular organisms → Bacteria	556
3300017766|Ga0181343_1120956	All Organisms → cellular organisms → Bacteria	736
3300017774|Ga0181358_1260241	All Organisms → cellular organisms → Bacteria	542
3300017778|Ga0181349_1210330	All Organisms → cellular organisms → Bacteria	667
3300017778|Ga0181349_1252774	All Organisms → cellular organisms → Bacteria	587
3300017778|Ga0181349_1279836	All Organisms → cellular organisms → Bacteria	546
3300017784|Ga0181348_1298595	All Organisms → cellular organisms → Bacteria	540
3300019783|Ga0181361_104039	All Organisms → cellular organisms → Bacteria	1103
3300019784|Ga0181359_1059043	All Organisms → cellular organisms → Bacteria	1470
3300019784|Ga0181359_1187068	Not Available	678
3300020167|Ga0194035_1262719	All Organisms → cellular organisms → Bacteria	513
3300020205|Ga0211731_10388800	Not Available	563
3300020554|Ga0208599_1053987	All Organisms → cellular organisms → Bacteria	570
3300020571|Ga0208723_1031466	All Organisms → cellular organisms → Bacteria	781
3300021962|Ga0222713_10608183	Not Available	637
3300022190|Ga0181354_1219120	Not Available	557
3300022407|Ga0181351_1243453	All Organisms → cellular organisms → Bacteria	566
3300022407|Ga0181351_1280591	All Organisms → cellular organisms → Bacteria	500
3300024348|Ga0244776_10254703	All Organisms → cellular organisms → Bacteria	1220
3300025476|Ga0208495_1082531	All Organisms → cellular organisms → Bacteria	572
3300027320|Ga0208923_1070556	All Organisms → cellular organisms → Bacteria	618
3300027333|Ga0255138_1069218	All Organisms → cellular organisms → Bacteria	588
3300027518|Ga0208787_1150553	All Organisms → cellular organisms → Bacteria	520
3300027621|Ga0208951_1176459	All Organisms → cellular organisms → Bacteria	544
3300027644|Ga0209356_1167495	All Organisms → cellular organisms → Bacteria	606
3300027659|Ga0208975_1172293	All Organisms → cellular organisms → Bacteria	592
3300027659|Ga0208975_1175937	All Organisms → cellular organisms → Bacteria	584
3300027688|Ga0209553_1053625	All Organisms → Viruses	1575
3300027708|Ga0209188_1275326	All Organisms → cellular organisms → Bacteria	570
3300027746|Ga0209597_1163153	All Organisms → cellular organisms → Bacteria	942
3300027756|Ga0209444_10313024	All Organisms → cellular organisms → Bacteria	521
3300027892|Ga0209550_10777621	Not Available	540
3300027973|Ga0209298_10025411	All Organisms → cellular organisms → Bacteria	2919
3300027974|Ga0209299_1092486	All Organisms → Viruses	1195
3300031758|Ga0315907_11099053	All Organisms → cellular organisms → Bacteria	565
3300031787|Ga0315900_10483594	All Organisms → cellular organisms → Bacteria	945
3300031857|Ga0315909_10536192	All Organisms → cellular organisms → Bacteria	798
3300031885|Ga0315285_10915184	All Organisms → cellular organisms → Bacteria	535
3300031999|Ga0315274_11549882	All Organisms → cellular organisms → Bacteria	626
3300032093|Ga0315902_11193248	All Organisms → cellular organisms → Bacteria	548
3300032401|Ga0315275_12625658	Not Available	519
3300032516|Ga0315273_12834588	Not Available	548
3300033979|Ga0334978_0334697	All Organisms → cellular organisms → Bacteria	721
3300033979|Ga0334978_0431356	All Organisms → cellular organisms → Bacteria	619
3300034012|Ga0334986_0325150	All Organisms → cellular organisms → Bacteria	806
3300034018|Ga0334985_0287120	All Organisms → cellular organisms → Bacteria	1037
3300034061|Ga0334987_0474745	All Organisms → cellular organisms → Bacteria	769
3300034062|Ga0334995_0608419	All Organisms → cellular organisms → Bacteria	633
3300034093|Ga0335012_0377805	All Organisms → cellular organisms → Bacteria	698
3300034095|Ga0335022_0098236	Not Available	1872
3300034101|Ga0335027_0373649	All Organisms → cellular organisms → Bacteria	934
3300034101|Ga0335027_0691711	All Organisms → cellular organisms → Bacteria	606
3300034104|Ga0335031_0681385	All Organisms → cellular organisms → Bacteria	593
3300034106|Ga0335036_0754566	All Organisms → cellular organisms → Bacteria	569
3300034112|Ga0335066_0368075	All Organisms → cellular organisms → Bacteria	793
3300034120|Ga0335056_0339791	All Organisms → Viruses → unclassified viruses	822
3300034166|Ga0335016_0161478	All Organisms → cellular organisms → Bacteria	1511
3300034280|Ga0334997_0489799	All Organisms → cellular organisms → Bacteria	770

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.11%
Terrestrial	Environmental → Terrestrial	0.89%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	88.50%
Marine	Environmental → Aquatic → Marine	10.62%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.89%

Type

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	47.79%
Lentic	Environmental → Aquatic → Freshwater → Lentic	34.51%
Coastal	Environmental → Aquatic → Marine → Coastal	6.19%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.54%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.65%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	1.77%
River	Environmental → Aquatic → Freshwater → River	0.89%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.89%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.89%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.89%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	44.25%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	31.86%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.19%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.54%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.54%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.65%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.65%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.89%

Habitat

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	25.66%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	20.35%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	17.70%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.42%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	3.54%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.54%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.54%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.54%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.65%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.65%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.65%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.89%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.89%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.89%
Drinking Water Treatment Plant	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Drinking Water Treatment Plant	0.89%
Aquatic	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic	0.89%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.89%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.89%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.89%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.89%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.89%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.89%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental
3300002294	Freshwater microbial communities from Lake Mendota, WI - 17MAY2012 deep hole epilimnion	Environmental
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental
3300004693	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA7.5M (version 2)	Environmental
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental
3300007363	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA	Environmental
3300007735	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea ? 2014Oct	Environmental
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental
3300008339	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Sept 29, 2014 all contigs	Environmental
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental
3300011984	Freshwater microbial communities from drinking water treatment plant - The University of Hong Kong - Raw_water_201107	Environmental
3300011995	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 880 - Top - Depth 1m	Environmental
3300012722	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES163 metaT (Metagenome Metatranscriptome)	Environmental
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental
3300017700	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.D.D	Environmental
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental
3300017707	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.N	Environmental
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental
3300019783	Freshwater viral communities from Lake Michigan, USA - Sp13.ND.MM110.S.N	Environmental
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental
3300020167	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L239-20m	Environmental
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental
3300020554	Freshwater microbial communities from Lake Mendota, WI - 17AUG2012 deep hole epilimnion (SPAdes)	Environmental
3300020571	Freshwater microbial communities from Lake Mendota, WI - 31AUG2012 deep hole epilimnion (SPAdes)	Environmental
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental
3300024348	0.2um to 3um size fraction coassembly	Environmental
3300025476	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA14M (SPAdes)	Environmental
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental
3300027333	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepA_8d	Environmental
3300027518	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11 (SPAdes)	Environmental
3300027621	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)	Environmental
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental
3300027688	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (SPAdes)	Environmental
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental
3300027756	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)	Environmental
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental
3300027974	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)	Environmental
3300029930	Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727	Environmental
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental
3300033979	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME30Aug2017-rr0003	Environmental
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental
3300034120	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172	Environmental
3300034166	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Sep2012-rr0079	Environmental
3300034280	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J14230_102271332	3300001282	Freshwater	QLISFVGLKTKPQESPIDIVETTHQNWQGYNYTRTTIKLLNDNIEDDTVNA*
B570J29584_10112122	3300002294	Freshwater	LDVHMTQLISFVGLKTKPQESPIDVVETVHQNWQGVNYTRTTIKFLSEPDVNDSITT*
JGI25908J49247_100864592	3300003277	Freshwater Lake	MTQLISFVGLKTKTQESPIDVVETVHQNWQGVNYTRTTIKLLNDNIADDIANELTERI*
JGI25908J49247_101568991	3300003277	Freshwater Lake	FVGLKTKLQESPIDVVETVHQNWQGVNYTRTTIKLLSEQSDDAIITA*
JGI25910J50241_100698531	3300003388	Freshwater Lake	LLDLKLKLQESPIDVVETVHQNWQGVNYTRTTIKFLSEPDVNDSITT*
JGI25910J50241_101848421	3300003388	Freshwater Lake	QLISFVGLKTKLQESPIDVVETVHQNWQGVNYTRTTIKFLSEPDINANITT*
JGI25910J50241_101869041	3300003388	Freshwater Lake	DVHMTQLISFVGLKTKTQESPIDVVETIHQNWQGVNYTRTTIKLLNDNIADDIANELTERI*
Ga0065167_11039392	3300004693	Freshwater	TKPQESPIDIVQETRTNWTGQPYTVTTIKLLSEQSNNDSINA*
Ga0049083_102942911	3300005580	Freshwater Lentic	LDVHMTQLISFVGLKTKTQESPIDVVETVHQNWQGVNYTRTTIKLLNDNIADDIANELTERI*
Ga0070749_107514702	3300006802	Aqueous	IHMVQLISFVGLKTKPSETPVDIVETVHQNWQGQNYTRTTIKLLNEAPENYIVEV*
Ga0075464_104456943	3300006805	Aqueous	TQIINYVGIKTKPQESPIDIVQETRTNWTGQPYTVTTIKLLSEQSNDDTINA*
Ga0075464_109310042	3300006805	Aqueous	KTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPTIDDSITT*
Ga0075464_109985792	3300006805	Aqueous	CMNDWLDIHMVQLISFVGLKTKPQETPIDIVQETRTNWSGNEYTYTTIKLLNDNTV*
Ga0075458_100901091	3300007363	Aqueous	SFVGLKTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPTIDDTVTT*
Ga0104988_100271	3300007735	Freshwater	INFIGINTKPQETPVDIVETTHQNWQGQNYTRTTIKLLNDTTQDDTVTA*
Ga0105748_103866412	3300007992	Estuary Water	QLISFVGLKTKTQESPIDVVETIHQNWQGVNYTRTTIKFLSEPDVNDSITT*
Ga0114363_11139581	3300008266	Freshwater, Plankton	LKTKPSETPVDIVETVHQNWQGQNYTRTTIKLLNEAPENYTVEV*
Ga0114878_11508413	3300008339	Freshwater Lake	LDIHMVQLISFVGLKTKPSETPVDIVETVHQNWQGQNYTRTTIKLLNEAPENYTVEV*
Ga0102829_12847821	3300009026	Estuarine	DVVETVHQNWQGVNYTRTSIKFLSEPDVTDSITT*
Ga0114973_106836712	3300009068	Freshwater Lake	VGLKTKPQESPIDIVQTIHQDWTGKDYTRTTIKLLSEQSDNDTVNA*
Ga0114962_106306991	3300009151	Freshwater Lake	SPINIVQETRTNWTGQPYTVTTIKLLSEQSDDDTVTA*
Ga0114980_100273741	3300009152	Freshwater Lake	ESPIDIVETVHQNWQGVNYTRTTIKFLSEPDINANITT*
Ga0114980_105431762	3300009152	Freshwater Lake	QLISFVGLKTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPTIDDSITT*
Ga0114980_107789542	3300009152	Freshwater Lake	WLKEHMTQLINYIGIKTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPTIDDTVTT*
Ga0114980_108375181	3300009152	Freshwater Lake	MVQLISFVGLKTKPQESLIDIVETVHQNWQGVNYTRTTIKLLNEQTNDDSITA*
Ga0114968_106951042	3300009155	Freshwater Lake	TQLISFVGLKTKPQESPIDIVQTIHQDWTGKDYTRTTIKLLNDNLADDIANELTERI*
Ga0114977_106825961	3300009158	Freshwater Lake	IDVVETVHQNWQGVNYTRTTIKFLSEPDINANITT*
Ga0114981_102744101	3300009160	Freshwater Lake	QESPIDIVETVHQNWQGVNYTRTTIKFLSEPTIDDTVTT*
Ga0114966_106982052	3300009161	Freshwater Lake	GLKTKPQESPIDVVETVHQNWQGVNYTRTTIKFLSEPDVNDSITT*
Ga0114966_107434012	3300009161	Freshwater Lake	HMVQLISFVGLKTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPTIDDTVTT*
Ga0114970_106291932	3300009163	Freshwater Lake	GLKTKPQESPIDIVQTIHQDWTGKDYTRTTIKLLSEQSDNDTVNA*
Ga0114970_106415601	3300009163	Freshwater Lake	TQLISFVGLKTKTQESPIDVVETVHQNWQGEKYTRTTIKFLSEPDVNDSITT*
Ga0114970_107652592	3300009163	Freshwater Lake	DVHMTQLISFVGLKTKPQESPIDIVQTIHQDWTGKDYTRTTIKLLNDNLADDIANELTERI*
Ga0114969_101983271	3300009181	Freshwater Lake	ISFVGLKTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPDINANITT*
Ga0114974_108007011	3300009183	Freshwater Lake	ISFVGLKTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPTIDDSITT*
Ga0115545_11698681	3300009433	Pelagic Marine	NFVGINTKPQETPVDIVETVHQDWTGRDYTRTTIKLLNNTTQDDTVTAYLTRKV*
Ga0129333_114172371	3300010354	Freshwater To Marine Saline Gradient	QESPIDIVETTHQNWQGINYTRTTIKFLSEPTIDDTVTA*
Ga0119931_10376433	3300011984	Drinking Water Treatment Plant	KTKPQETPVDIVETVHQDWHGRNYTRTTIKLLNDNLADDIVNQTNIQV*
Ga0153800_10065953	3300011995	Freshwater	IDVVETVHQNWQGVNYTRTTIKFLSEPDVNDSITT*
Ga0157630_10316631	3300012722	Freshwater	ESPIDIVETVHQNWQGVNYTRTTIKFLSEPDVNDSITT*
Ga0164293_106579241	3300013004	Freshwater	LISFVGLKTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPTIDDSITT*
Ga0164293_107178691	3300013004	Freshwater	SFVGLKTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPDINANITT*
Ga0164293_109907892	3300013004	Freshwater	DVHMTQLISFVGLKTKPQESPIDIVETVHQNWQGVNYTRTTIKLLNDSIEDDTVNA*
Ga0164292_105136213	3300013005	Freshwater	NNWLDVHMTQLISFVGLKTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPDINANITT
Ga0164292_110386162	3300013005	Freshwater	LISFVGLKTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPDVNDSITT*
Ga0164295_111766463	3300013014	Freshwater	LINYVGLKTKPQESPIDVVETVHQNWQGVNYTRTTIKFLSEPDVNDSITT*
Ga0170791_110408752	3300013295	Freshwater	KTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPTIDDTVTT*
Ga0181339_10126531	3300017700	Freshwater Lake	QESPIDVVETVHQNWQGVNYTRTTIKLLNDNIVGANIIT
Ga0181364_10254031	3300017701	Freshwater Lake	INYVGLKTKPQESPIDVVETVHQNWQGVNYTRTTIKFLSEPNVNDSITT
Ga0181363_10432093	3300017707	Freshwater Lake	PIDIVETVHQNWQGVNYTRTTIKFLSEPTIDDTVTT
Ga0181347_11974641	3300017722	Freshwater Lake	LKTKPQESPVDIVQTTHKAWNGQDYTRTTIKLLSEQSDDDTVTA
Ga0181362_11009801	3300017723	Freshwater Lake	KWLAKHMTQLINYVGINTKPQETPIVIVETVHQNWQGVNYTRTTIKFLSEPDINANITT
Ga0181352_11518331	3300017747	Freshwater Lake	ISFVGLKTKPQESPIDIVETTHQNWQGINYTRTTIKFLSEPTIDDTVTT
Ga0181352_11575261	3300017747	Freshwater Lake	QESPIDIVETTHQNWQGINYTRTTIKFLSEPTIDDTVTT
Ga0181352_11761522	3300017747	Freshwater Lake	VGLKTKPQESPIDIVETTHQNWQGINYTRTTIKFLSEPTIDDTVTT
Ga0181343_11209561	3300017766	Freshwater Lake	SPIDIVETTHQNWQGINYTRTTIKFLSEPTIDDTVTT
Ga0181358_12602411	3300017774	Freshwater Lake	SFVGLKTKLQESPIDVVETVHQNWQGVNYTRTTIKFLSEPDINANIIT
Ga0181349_12103303	3300017778	Freshwater Lake	FVGLKTKLQESPIDVVETVHQNWQGVNYTRTTIKLLSEQSDDAIITA
Ga0181349_12527742	3300017778	Freshwater Lake	FVGLKTKPQESPVDIVQTTHKAWNGQDYTRTTIKLLSEQSDDDTVTA
Ga0181349_12798362	3300017778	Freshwater Lake	FVGLKTKPQESPVDIVQTTHKAWNGQDYTRTTIKLLSEQSDNDTVTA
Ga0181348_12985951	3300017784	Freshwater Lake	SFVGLKTKLQESPIDVVETVHQNWQGVNYTRTTIKFLSEPDINANITT
Ga0181361_1040393	3300019783	Freshwater Lake	FVGLKTKLQESPIDVVETVHQNWQGVNYTRTTIKFLSEPDVNDSITT
Ga0181359_10590431	3300019784	Freshwater Lake	KPQESPIDIVETTHQNWQGINYTRTTIKFLSEPTIDDTVTT
Ga0181359_11870683	3300019784	Freshwater Lake	DNWLDVHMTQLISFVGLKTKLQESPIDVVETVHQNWQGVNYTRTTIKLLSEQSDDAIITA
Ga0194035_12627192	3300020167	Anoxic Zone Freshwater	NWLDVHMTQLISFVGLKTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPDINANITT
Ga0211731_103888003	3300020205	Freshwater	QLISFVGLKTKPQESPVDIVETVHQNWQGVNYTRTTIKLLSEQSDNDTVTA
Ga0208599_10539872	3300020554	Freshwater	FVGLKTKPQESPIDIVETTHQNWQGINYTRTTIKLLSDQENADTVTA
Ga0208723_10314663	3300020571	Freshwater	DVHMVQLISFVGLKTKPQESPIDIVETTHQNWQGYNYTRTTIKLLNDNIEDDTVNA
Ga0222713_106081833	3300021962	Estuarine Water	HLTQLVNFVGLKTKPQESPIEIVETVHQDWQGHNYTRTTIKLLNNTTQNDNVTA
Ga0181354_12191201	3300022190	Freshwater Lake	VHMTQLISFVGLKTKLQESPIDVVETVHQNWQGVNYTRTTIKLLSEQSDDAIITA
Ga0181351_12434533	3300022407	Freshwater Lake	TKLQESPIDVVETVHQNWQGVNYTRTTIKFLSEPDINANITT
Ga0181351_12805912	3300022407	Freshwater Lake	MNNWLDVHMTQLISFVGLKTKTQESPIDVVETVHQNWQGVNYTRTTIKFLSEPDVNDSIT
Ga0244776_102547031	3300024348	Estuarine	LINYVGIKTKPNETPIDIVEETNTNWQGEKYTRTTIKFLSDPDVNDSITT
Ga0208495_10825312	3300025476	Freshwater	LINHVGIKTKPQESPIDIVQETRTNWTGQPYTVTTIKLLSEQTSNDTVNA
Ga0208923_10705562	3300027320	Estuarine	TQESPIDVVETVHQNWQGVNYTRTTIKFLSEPDVNDSITT
Ga0255138_10692181	3300027333	Freshwater	HMTQLISFVGLKTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPDVNDSITT
Ga0208787_11505532	3300027518	Deep Subsurface	LISFVGLKTKPQESPIDIVETTHQNWQGINYTRTTIKFLSEPRIDDTVTT
Ga0208951_11764592	3300027621	Freshwater Lentic	LDVHMTQLISFVGLKTKTQESPIDVVETVHQNWQGVNYTRTTIKLLNDNIADDIANELTERI
Ga0209356_11674952	3300027644	Freshwater Lake	QLISFVGLKTKLQESPIDVVETVHQNWQGVNYTRTTIKFLSEPDINANITT
Ga0208975_11722931	3300027659	Freshwater Lentic	KTKPQESPIDIVETTHQNWQGINYTRTTIKFLSEPTIDDTVTT
Ga0208975_11759371	3300027659	Freshwater Lentic	FVGLKTKPQESPVDIVQTTHKAWNGQDYTRTTIKLLNQPTQDDTVTA
Ga0209553_10536253	3300027688	Freshwater Lake	ISFVGLKTKLQESPIDVVETVHQNWQGVNYTRTTIKFLSEPDINANITT
Ga0209188_12753262	3300027708	Freshwater Lake	KPQESPINIVQETRTNWTGNPYTVTTIKLLSEQSNNDSINA
Ga0209597_11631531	3300027746	Freshwater Lake	ESPIDVVETVHQNWQGVNYTRTTIKFLSEPDVNDSITT
Ga0209444_103130241	3300027756	Freshwater Lake	TQLISFVGLKTKLQESPIDVVETVHQNWQGVNYTRTTIKFLSEPDINANITT
Ga0209550_107776213	3300027892	Freshwater Lake	TQLISFVGLKTKLQESPIDVVETVHQNWQGVNYTRTTIKLLSEQSDDAIITA
Ga0209298_100254111	3300027973	Freshwater Lake	ESPIDIVETVHQNWQGVNYTRTTIKFLSEPDINANITT
Ga0209299_10924863	3300027974	Freshwater Lake	QESPIDIVETVHQNWQGVNYTRTTIKFLSEPTIDDTVTT
Ga0119944_10499771	3300029930	Aquatic	GLKTKPSETPVDIVETVHQNWQGQNYTRTTIKLLNEAPENYIVEV
Ga0315907_110990531	3300031758	Freshwater	QESPIDVVETVHQNWQGVNYTRTTIKFLSEPDVNDSITT
Ga0315900_104835943	3300031787	Freshwater	TKPQESPIDIELTTHKAWNGQEYTRTTIKLLNDNIVGANIIT
Ga0315909_105361923	3300031857	Freshwater	IDVVETVHQNWQGVNYTRTTIKFLSEPDVNDSITT
Ga0315285_109151841	3300031885	Sediment	YIGIKTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPDINANITT
Ga0315274_115498822	3300031999	Sediment	TKTQESPIDVVETVHQNWQGVNYTRTTIKFLSEPDINANITT
Ga0315902_111932481	3300032093	Freshwater	MNNWLDVHMTQLISFVGLKTKTQESPIDVVETVHQNWQGVNYTRTTIKLLNDNIADDIANELTERI
Ga0315275_126256582	3300032401	Sediment	LHNWLKEHMTQLINYIGIKTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPTIDDSIT
Ga0315273_128345883	3300032516	Sediment	LISFVGLKTKTQESPIDIVETTHQNWQGVNYTRTTIKLLSEQSEDAIITA
Ga0334978_0334697_444_629	3300033979	Freshwater	MNNWLDVHMTQLISFVGLKTKPQESPIDVVETVHQNWQGVNYTRTTIKFLSEPDVNDSIT
Ga0334978_0431356_2_157	3300033979	Freshwater	QLISFVGLKTKPQESPIDIVETTHQNWQGINYTRTTIKFLSEPTIDDTVTT
Ga0334986_0325150_3_116	3300034012	Freshwater	SPIDVVETVHQNWQGVNYTRTTIKFLSEPDVNDSITT
Ga0334985_0287120_59_244	3300034018	Freshwater	MNNWLDVHMTQLISFVGLKTKPQESPIDVVETVHQNWQGVNYTRTTIKFLSEPTIDDSIT
Ga0334987_0474745_616_768	3300034061	Freshwater	LISFVGLKTKPQESPIDIVETTHQNWQGINYTRTTIKFLSEPTIDDTVTT
Ga0334995_0608419_426_602	3300034062	Freshwater	MTQLINYIGIKTKPQETPVDIVQTVHQNWQGQDYTRTTIKLLNDNLADDIANELTERI
Ga0335012_0377805_1_114	3300034093	Freshwater	SPIDIVETVHQNWQGVNYTRTTIKFLSEPTIDDSITT
Ga0335022_0098236_16_186	3300034095	Freshwater	MNNWLDVHMTQLISFVGLKTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPTIV
Ga0335027_0373649_472_657	3300034101	Freshwater	MNNWLDVHMVQLISFVGLKTKPQESPIDIVETTHQNWQGINYTRTTIKFLSEPTIDDTVT
Ga0335027_0691711_451_606	3300034101	Freshwater	QLISFVGLKTKPQESPIDIVETTHQNWQGYNYTRTTIKLLNDNIEDDTVNA
Ga0335031_0681385_3_116	3300034104	Freshwater	SPIDVVETTHQNWQGVNYTRTTIKFLSEPDVNDSITT
Ga0335036_0754566_300_485	3300034106	Freshwater	MNDWLDVYMVQLISFVGLKTKPQESPIDIVETTHQNWQGINYTRTTIKFLSEPTIDDTVT
Ga0335066_0368075_664_792	3300034112	Freshwater	TKPQESPIDVVETVHQNWQGVNYTRTTIKFLSEPTIDDSITT
Ga0335056_0339791_683_820	3300034120	Freshwater	GLKTKPQESPIDVVETVHQNWQGVNYTRTTIKFLSEPTIDDSITT
Ga0335016_0161478_1346_1507	3300034166	Freshwater	MTQLISFVGLKTKPQESPIDIVETVHQNWQGVNYTRTTIKLLSEQSDDDTVTV
Ga0334997_0489799_50_235	3300034280	Freshwater	MNKWLNTHMTQLINYVGLKTKPQESPIDIVETVHQNWQGVNYTRTTIKFLSEPDVNDSIT