Metagenome / Metatranscriptome Family F082319

Basic Information
Family ID	F082319
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	49 residues
Representative Sequence	MIPQLSIQERDRRYKIVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYL
Number of Associated Samples	107
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.21 %
% of genes near scaffold ends (potentially truncated)	98.23 %
% of genes from short scaffolds (< 2000 bps)	97.35 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Bacteria (99.115 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (12.389 % of family members)
Environment Ontology (ENVO)	Unclassified (33.628 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (35.398 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.68% β-sheet: 13.16% Coil/Unstructured: 63.16%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00903	Glyoxalase	6.19
PF04392	ABC_sub_bind	4.42
PF12681	Glyoxalase_2	4.42
PF13416	SBP_bac_8	1.77
PF03401	TctC	0.88
PF13531	SBP_bac_11	0.88
PF14294	DUF4372	0.88
PF00557	Peptidase_M24	0.88
PF02371	Transposase_20	0.88
PF13343	SBP_bac_6	0.88
PF07878	RHH_5	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.42
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.88
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.12 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	69.03 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	8.85 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	63.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	8.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	63.72 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	8.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	63.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Unclassified	root	N/A	0.88 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	63.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Unclassified	root	N/A	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_101762312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	940	Open in IMG/M
3300000953\|JGI11615J12901_10001259	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300000956\|JGI10216J12902_100850292	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1517	Open in IMG/M
3300000956\|JGI10216J12902_104045010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	756	Open in IMG/M
3300003987\|Ga0055471_10247335	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	565	Open in IMG/M
3300004011\|Ga0055460_10059175	All Organisms → cellular organisms → Bacteria → Proteobacteria	1007	Open in IMG/M
3300004157\|Ga0062590_101742695	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300004480\|Ga0062592_101638573	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300005294\|Ga0065705_11028146	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300005295\|Ga0065707_10176192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1449	Open in IMG/M
3300005345\|Ga0070692_10378957	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	887	Open in IMG/M
3300005354\|Ga0070675_101214521	All Organisms → cellular organisms → Bacteria → Proteobacteria	694	Open in IMG/M
3300005445\|Ga0070708_100773188	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	903	Open in IMG/M
3300005471\|Ga0070698_101089843	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	747	Open in IMG/M
3300005518\|Ga0070699_101617641	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300005558\|Ga0066698_10595654	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300005561\|Ga0066699_11138048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300005598\|Ga0066706_10537609	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300005713\|Ga0066905_100770794	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300005713\|Ga0066905_100953078	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300005843\|Ga0068860_100868541	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300005843\|Ga0068860_102572636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300006844\|Ga0075428_100503774	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1295	Open in IMG/M
3300006845\|Ga0075421_102051701	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	608	Open in IMG/M
3300006845\|Ga0075421_102068340	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300006847\|Ga0075431_101737353	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	580	Open in IMG/M
3300006852\|Ga0075433_11067236	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	703	Open in IMG/M
3300006853\|Ga0075420_101071504	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300006854\|Ga0075425_102590426	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300006871\|Ga0075434_102117632	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	567	Open in IMG/M
3300006880\|Ga0075429_101557911	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300006903\|Ga0075426_11301548	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	552	Open in IMG/M
3300006904\|Ga0075424_102313929	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300006914\|Ga0075436_101013894	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	623	Open in IMG/M
3300006918\|Ga0079216_11956153	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	508	Open in IMG/M
3300006954\|Ga0079219_12481789	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504	Open in IMG/M
3300009100\|Ga0075418_11266238	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	799	Open in IMG/M
3300009101\|Ga0105247_11487787	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	552	Open in IMG/M
3300009162\|Ga0075423_11566759	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	708	Open in IMG/M
3300009609\|Ga0105347_1253830	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	724	Open in IMG/M
3300010043\|Ga0126380_11792327	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M
3300010047\|Ga0126382_12186903	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300010304\|Ga0134088_10627645	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300010359\|Ga0126376_12562084	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300011405\|Ga0137340_1115095	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300011417\|Ga0137326_1084915	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	714	Open in IMG/M
3300011427\|Ga0137448_1131199	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300011441\|Ga0137452_1126293	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300012022\|Ga0120191_10012280	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1090	Open in IMG/M
3300012035\|Ga0137445_1018804	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1261	Open in IMG/M
3300012039\|Ga0137421_1133133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	728	Open in IMG/M
3300012198\|Ga0137364_10457558	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	958	Open in IMG/M
3300012349\|Ga0137387_11195823	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300012354\|Ga0137366_10799083	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	670	Open in IMG/M
3300012498\|Ga0157345_1049592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	530	Open in IMG/M
3300012519\|Ga0157352_1039119	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	664	Open in IMG/M
3300012884\|Ga0157300_1108732	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300012984\|Ga0164309_11725503	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300012988\|Ga0164306_11317800	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	611	Open in IMG/M
3300014326\|Ga0157380_10999487	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	870	Open in IMG/M
3300014865\|Ga0180078_1081983	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300015053\|Ga0137405_1094386	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1347	Open in IMG/M
3300015259\|Ga0180085_1031918	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1483	Open in IMG/M
3300015262\|Ga0182007_10341032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300015371\|Ga0132258_12094515	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1422	Open in IMG/M
3300015373\|Ga0132257_100280491	All Organisms → cellular organisms → Bacteria → Proteobacteria	1997	Open in IMG/M
3300017656\|Ga0134112_10309466	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	637	Open in IMG/M
3300017792\|Ga0163161_10259254	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1357	Open in IMG/M
3300017966\|Ga0187776_10819942	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	669	Open in IMG/M
3300018000\|Ga0184604_10106365	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	876	Open in IMG/M
3300018028\|Ga0184608_10134635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1056	Open in IMG/M
3300018073\|Ga0184624_10340995	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	671	Open in IMG/M
3300018076\|Ga0184609_10458840	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	585	Open in IMG/M
3300018081\|Ga0184625_10080460	All Organisms → cellular organisms → Bacteria	1666	Open in IMG/M
3300018081\|Ga0184625_10372097	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	740	Open in IMG/M
3300019356\|Ga0173481_10023545	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
3300019789\|Ga0137408_1281784	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1035	Open in IMG/M
3300020003\|Ga0193739_1029211	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1432	Open in IMG/M
3300020004\|Ga0193755_1006630	All Organisms → cellular organisms → Bacteria	3753	Open in IMG/M
3300020006\|Ga0193735_1001488	All Organisms → cellular organisms → Bacteria	7529	Open in IMG/M
3300020022\|Ga0193733_1017996	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1996	Open in IMG/M
3300020195\|Ga0163150_10141198	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1403	Open in IMG/M
3300021412\|Ga0193736_1044787	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300021560\|Ga0126371_10289040	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300022214\|Ga0224505_10103844	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1115	Open in IMG/M
3300022385\|Ga0210376_1062250	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300022694\|Ga0222623_10294574	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	623	Open in IMG/M
3300022756\|Ga0222622_10863059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	663	Open in IMG/M
3300025926\|Ga0207659_10995729	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	721	Open in IMG/M
3300025934\|Ga0207686_10717724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	796	Open in IMG/M
3300025951\|Ga0210066_1046489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	729	Open in IMG/M
3300025966\|Ga0210105_1077594	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300025971\|Ga0210102_1039464	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1020	Open in IMG/M
3300026095\|Ga0207676_11151832	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	768	Open in IMG/M
3300026118\|Ga0207675_102066733	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586	Open in IMG/M
3300026320\|Ga0209131_1312934	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	584	Open in IMG/M
3300026324\|Ga0209470_1345263	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	535	Open in IMG/M
3300026332\|Ga0209803_1149800	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	904	Open in IMG/M
3300026540\|Ga0209376_1346801	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300026548\|Ga0209161_10479957	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	548	Open in IMG/M
3300027787\|Ga0209074_10231541	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	709	Open in IMG/M
3300027874\|Ga0209465_10192705	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1017	Open in IMG/M
3300028293\|Ga0247662_1074948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	603	Open in IMG/M
3300028828\|Ga0307312_11050122	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539	Open in IMG/M
3300028884\|Ga0307308_10222399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	905	Open in IMG/M
3300031820\|Ga0307473_10297499	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1014	Open in IMG/M
3300032163\|Ga0315281_10893759	All Organisms → cellular organisms → Bacteria → Proteobacteria	909	Open in IMG/M
3300032205\|Ga0307472_100143725	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300033480\|Ga0316620_11332216	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	706	Open in IMG/M
3300033513\|Ga0316628_104388098	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300034150\|Ga0364933_089775	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	774	Open in IMG/M
3300034819\|Ga0373958_0186190	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.34%
Host-Associated	Host-Associated	25.66%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.33%
Plants	Host-Associated → Plants	25.66%
Aquatic	Environmental → Aquatic	23.01%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.58%
Sediment	Environmental → Aquatic → Sediment	15.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.08%
Marine	Environmental → Aquatic → Marine	6.19%
Freshwater	Environmental → Aquatic → Freshwater	1.77%
Floodplain	Environmental → Terrestrial → Floodplain	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.04%
Loam	Environmental → Terrestrial → Soil → Loam	7.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.31%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.42%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.65%
Lake	Environmental → Aquatic → Freshwater → Lake	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.77%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.89%
Sediment	Environmental → Aquatic → Marine → Sediment	0.89%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.31%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.89%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.89%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.85%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.31%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.77%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.89%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.89%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.89%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.89%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004011	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012035	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT338_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014865	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10D	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020195	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IB	Environmental	Open in IMG/M
3300021412	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022214	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1	Environmental	Open in IMG/M
3300022385	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S771 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025951	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025966	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082319

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1017623121	3300000559	Soil	MIPQLSIEERDRRYKIVRGEMAKRGIDCLLLPANTGRWEQLQGDSRYLTTIGGFATE
JGI11615J12901_100012591	3300000953	Soil	MIPQLSIQERDRRYQLVRAEMAKRGIDVLLLPANTGRWEQLQGDSRY
JGI10216J12902_1008502922	3300000956	Soil	MIPQLSVEERDRRYQLVRAEMAKRGVDVLLLPANTGRWEQLQGDSRYLTNIGGFATEMFTVFPA
JGI10216J12902_1040450102	3300000956	Soil	MIPQLSIQERDRRYQIVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYLTNI
Ga0055471_102473351	3300003987	Natural And Restored Wetlands	MIPQLSIEERDRRYQVVRAEMSKRNIDVLLLPANTGRWEQLQGDSRYLTTIG
Ga0055460_100591752	3300004011	Natural And Restored Wetlands	MIPQLSIQERDRRYQLVRAEMVKRGIDVLLLPANTGRWEQLQGDSRYLTNIGG
Ga0062590_1017426952	3300004157	Soil	MIPQLSIQERDRRYQLVRAEMAERGIDVLLLPANTGRWEQLQGDSRYLTNIGGFATEMFT
Ga0062592_1016385732	3300004480	Soil	MIPQLSIQERDRRYQLVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYLTNIG
Ga0065705_110281461	3300005294	Switchgrass Rhizosphere	MIPQLSIEERDRRYKIVRAEMAKRGIDVLLLPANTGRWEQ
Ga0065707_101761921	3300005295	Switchgrass Rhizosphere	MIPQLSIQERDRRYKIVRAEMAKHGIDCLLLPANTGRWEQLQGDSRYLTTIG
Ga0070692_103789571	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MIPQLSIEERDRRYKIVRAEMVQRNIDVLLLPANTGRWEQLQGDSRYLT
Ga0070675_1012145211	3300005354	Miscanthus Rhizosphere	MIPQLSIQERDRRYKLVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYLTNIGGFATEMF
Ga0070708_1007731882	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MIPQLSLQERDRRYDKVRAEMARQGIDCLLLPANTGRWEQLQGDSRYLTTIGGFATEVF
Ga0070698_1010898431	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MIPQLSIEERDRRYKIVRGEMAKRGIDCLLLPANTGRWEQLQGDSRYLTTIGGFATEVF
Ga0070699_1016176412	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSETELIPQLSLEERDRRYRNVRREMARRGIECLLLPANSGRW
Ga0066698_105956541	3300005558	Soil	MASDILIPQLTLEERDRRYRKAREAMAAAGIDCFLLPANSGRWEQ
Ga0066699_111380482	3300005561	Soil	MNIMIPQLSIQERDRRYQIVRAEMGKRGIDCLLLPANTGRWEQLQGDSRY
Ga0066706_105376092	3300005598	Soil	MQIPQLSLEERDRRYKKVRTEMARSNIDCLLLPANTGRWEQLQADS
Ga0066905_1007707941	3300005713	Tropical Forest Soil	MIPQLSIQERDRRYKIVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYL
Ga0066905_1009530781	3300005713	Tropical Forest Soil	MIPQLSIEERDRRYKNVRREMAKRGIDCLLLPANTGRWEQLQG
Ga0068860_1008685412	3300005843	Switchgrass Rhizosphere	MNIPQLSIQERDRRYKIVRAEMVKRGIDCLLLPANTGRWEQLQGDSRYL
Ga0068860_1025726361	3300005843	Switchgrass Rhizosphere	MIPQLSIQERDRRYQKVRAEMTRRGVDVLLLPANTGRW
Ga0075428_1005037741	3300006844	Populus Rhizosphere	MIPQLSIEERDRRYKIVRAEMATRGIDCLLLPANTGRWEQLQGDSR
Ga0075421_1020517011	3300006845	Populus Rhizosphere	MIPQLTLQERDRRYKIVRDEMVKRSIDVLILPANTGRWEQLQGDSRYLTSIG
Ga0075421_1020683402	3300006845	Populus Rhizosphere	MIPQLSIQERDRRYKTVRAEMAKLGIDVLLLPANTGRWEQL
Ga0075431_1017373531	3300006847	Populus Rhizosphere	MIPQLSIQERDRRYKIVKAEMAKRGIDCLLLPANTGRWEQLQ
Ga0075433_110672362	3300006852	Populus Rhizosphere	MIPQLSIQERDRRYQNVRAEMAKLGIDCLLLPANTGRWEQLQGDSRYLTTIGGFATE
Ga0075420_1010715042	3300006853	Populus Rhizosphere	MIPQLSIEERDRRYRIVRTEMAQRNIDVLLLPANTGRWEQLQGDSRYLTSIGGFSTEVF
Ga0075425_1025904262	3300006854	Populus Rhizosphere	MIPQLSIKERDRRYKIVRAEMATRGIDCLLLPANTGRWE
Ga0075434_1021176321	3300006871	Populus Rhizosphere	MIPQLSIQERDRRYKTVRAEMAKLGIDVLLLPANTGRWEQLQG
Ga0075429_1015579112	3300006880	Populus Rhizosphere	MIPQLSIQERDRRYKIVRAEMAKHGIDCLLLPANTG
Ga0075426_113015482	3300006903	Populus Rhizosphere	MIPQLSIEERDRRYKIVRAEMATRGIDCLLLPANTGRWEQLQGDSRYLTTI
Ga0075424_1023139291	3300006904	Populus Rhizosphere	MIPQLSIKERDRRYKIVRAEMATRGIDCLLLPANT
Ga0075436_1010138941	3300006914	Populus Rhizosphere	MIPQLSLQERDRRYDKVRAEMARQGIDCLLLPANTGRWE
Ga0079216_119561531	3300006918	Agricultural Soil	MIPQLSIQERDRRYKLVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYLT
Ga0079219_124817892	3300006954	Agricultural Soil	MSIPQLSIEERDRRYKKVRAEMAQSNIDVLLLPANTG
Ga0075418_112662381	3300009100	Populus Rhizosphere	MIPQLSIEERDRRYKIVRAEMVQRNIDVLLLPANTGRWEQLQGDSRYLTSIGG
Ga0105247_114877871	3300009101	Switchgrass Rhizosphere	MGIPQLSIEERDRRYKVVRAEMAQRNIDVLLLPANTGRWEQLQGDSRYL
Ga0075423_115667592	3300009162	Populus Rhizosphere	MIPQLSIQERDRRYKLVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYLTNIGGFATEMFTIFP
Ga0105347_12538301	3300009609	Soil	MIPQLSIQERDRRYKIVRAEMAKRGIDVLLAPANTGRWEQLQGDS
Ga0126380_112116762	3300010043	Tropical Forest Soil	METDLIPQLSLEERDRRYKKVREEMLQRGIDVLLLPANSGRWEQL
Ga0126380_117923272	3300010043	Tropical Forest Soil	MIPQLSIQERDRRYKIVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYLTTIGGFA
Ga0126382_121869032	3300010047	Tropical Forest Soil	MIPELSIEERDRRYKIVRAEMAQRGIDCLLLPANTGRWEQLQGDSRYLTTIGGFATEVFTVF
Ga0134088_106276451	3300010304	Grasslands Soil	MASDILIPQLNLEERDRRYRKAREAMAAAGIDYFLLPANSGRWEQLQA
Ga0126376_125620841	3300010359	Tropical Forest Soil	MIPQLSIQERDRRYKIVRAEMAKRNIDVLLLPANTG
Ga0137340_11150952	3300011405	Soil	MIPQLSIQERDRRYQLVRAEMAKRGIDVLLLPANT
Ga0137326_10849152	3300011417	Soil	MIPQLSIQERDRRYKVVRAEMAQHGIDCLLLPANTGRWE
Ga0137448_11311991	3300011427	Soil	MLIPQLSIEERDRRYKIVRAEMAKRGIDCLVLPANTGRWEQMQGDSRYLTSIGGFATEVFTVFP
Ga0137452_11262931	3300011441	Soil	MIPQLSIQERDRRYKIVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYLT
Ga0120191_100122802	3300012022	Terrestrial	MIPQLSIQERDRRYKIVRTEMAQCGIDCLLLPANTGRWEQLQGDSRYLTTIGGFATQVFPVF
Ga0137445_10188041	3300012035	Soil	MMIPQLSIQERDRRYKIVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYLTSIG
Ga0137421_11331331	3300012039	Soil	MIPQLSIQERDRRYQLVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYLTSIGGFATE
Ga0137364_104575582	3300012198	Vadose Zone Soil	MNIMIPQLSIQERDRRYQIVRAEMATRGIDCMLLPANTG
Ga0137387_111958232	3300012349	Vadose Zone Soil	MIPQLSIEERDRRYKIVRAEMAERGIDCLLLPANTGRWEQLQGDSRYLTTIGGFATEVFTVFPRE
Ga0137366_107990831	3300012354	Vadose Zone Soil	MIPQLSIQERDRRYRKVREEMARRSIDCLLLPANTGRWEQLQADSRYLTSIGGFATEV
Ga0157345_10495921	3300012498	Arabidopsis Rhizosphere	MNIPQLSIQERDRRYKIVRAEMVKRSIDCLLLPANT
Ga0157352_10391191	3300012519	Unplanted Soil	MNIPQLSIQERDRRYKIVRAEMVKRGIDCLLLPANTGRWEQLQGDSRY
Ga0157300_11087321	3300012884	Soil	MGIPQLSIEERDRRYKVVRAEMAQRKIDVLLLPANTG
Ga0164309_117255032	3300012984	Soil	MNIPQLSIQERDRRYKIVRAEMVKRGIDCLLLPANTGRWEQLQ
Ga0164306_113178001	3300012988	Soil	MIPQLSIEERDRRYKIVRAEMVQRNIDVLLLPANTGRWEQLQGDSRYLTSIGGFATEVFTVF
Ga0157380_109994872	3300014326	Switchgrass Rhizosphere	MIPQLSIQERDRRYKLVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYLTNIGGFATE
Ga0180078_10819831	3300014865	Soil	MMPQLSIQERDRRYKIVRAEMAGRGIDCLLLPANTGRWEQMQADS
Ga0137405_10943863	3300015053	Vadose Zone Soil	MIPQLSIQERDRRYKIVRAEMARRGIDCLLLPANTGRWEQLQGDSRYL
Ga0180085_10319181	3300015259	Soil	MIPLLSIQERDRRYKIVRAEMAKRGIDCLVLPANTGRWEQMQGDSRY
Ga0182007_103410321	3300015262	Rhizosphere	MGIPQLSIEERDRRYKVVRAEMAQRNIDVLLLPANTGRWEQLQGDSR
Ga0132258_120945153	3300015371	Arabidopsis Rhizosphere	MIPQLSIEERDRRYKIVRAEMAQRNIDVLLLPANTGRWEQLQGDSRYLTSIGGFATE
Ga0132257_1002804914	3300015373	Arabidopsis Rhizosphere	MIPQLSIQERDRRYQKVRAEMTRRGVDVLLLPANTGRWEQLQGDSRYLTNIGGFATEMFT
Ga0134112_103094662	3300017656	Grasslands Soil	MIPQLSIQERDRRYKIVRAEMARRGIDCLLLPANTG
Ga0163161_102592543	3300017792	Switchgrass Rhizosphere	MGIPQLSIEERDRRYKVVRAEMAQRNIDVLLLPANTGRWEQL
Ga0187776_108199422	3300017966	Tropical Peatland	MIPQLSIEERDRRYKIVRAEMAKRNIDVLLLPANTGRWEQ
Ga0184604_101063652	3300018000	Groundwater Sediment	MIPQLSLQERDRRYQIVRAEMAKRGIDVLILPANTGRWEQLQG
Ga0184608_101346351	3300018028	Groundwater Sediment	MIPQLSIQERDRRYRIVRAEMAKRGIDVLILPANTGRWEQLQGDSRYVTSIGG
Ga0184624_103409951	3300018073	Groundwater Sediment	MIPQLSIEERDRRYKIVRAQMAQRGIDCLLLPANTGRWEQMQADSRYIS
Ga0184609_104588402	3300018076	Groundwater Sediment	MSIPQLSIEERDRRYQNVRAEMARRGIDCLLLPANTGRWEQLQGDSRYITTIGGFATEVF
Ga0184625_100804601	3300018081	Groundwater Sediment	MIPQLSIEERDRRYKIVRAQMAQRGIDCLLLPANTGRWEQMQADSR
Ga0184625_103720971	3300018081	Groundwater Sediment	MSPQLAIEERDRRYKIVRAQMAQRGIDCLLLPANTGRWEQMQADSR
Ga0173481_100235451	3300019356	Soil	MGIPQLSIEERDRRYKVVRAEMAQRKIDVLLLPANTGRWEQLQGD
Ga0137408_12817842	3300019789	Vadose Zone Soil	MIPQLSIQERDRRYKIVKAEMAKRGIDCLLLPANTGRWEQLQGDSRYLTTIGGFATEV
Ga0193739_10292113	3300020003	Soil	MIPQLSIEERDRRYKIVRTEMAKRGIDCLLLPANTGRWEQLQGDSRYLTTI
Ga0193755_10066304	3300020004	Soil	MIPQLSIQERDRRYQMVRAEMAKRGIDVLILPANTGRWEQLQGVKAT
Ga0193735_10014881	3300020006	Soil	MIPQLSIQERDRRYQMVRAEMAKRGIDVLILPANTGRWEQLQGDSRYL
Ga0193733_10179961	3300020022	Soil	MIPQLSIQERDRRYQMVRAEMAKRGIDVLILPANTGRWEQLQGDSRYLTSIGGFATEVFTVFLR
Ga0163150_101411981	3300020195	Freshwater Microbial Mat	MIPQLSIQERDRRYQLVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYLTNIGGFAT
Ga0193736_10447871	3300021412	Soil	MIPQLSIEERDRRYQLVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYLTNIGGFA
Ga0126371_102890401	3300021560	Tropical Forest Soil	MSIPQLSLQERDRRYQKVRAEMKRQGIDCLLLPANTG
Ga0224505_101038441	3300022214	Sediment	MIPQLSIQERDRRYQLVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYLTNIGGFATEMFTVF
Ga0210376_10622502	3300022385	Estuarine	MIPQLSIQERDRRYQLVRGQMAKRGIDVLLLPANTGRWEQLQGDSRYLTNIGGFA
Ga0222623_102945742	3300022694	Groundwater Sediment	MIPQLSIQERDRRYRIVRAEMAKRGIDVLILPANTGRWEQLQGDSRYVTSIGGFATEVFTVF
Ga0222622_108630592	3300022756	Groundwater Sediment	MIPQLSIQERDRRYKIVRAEMAKRGIDVLLAPANTGRWEQLQG
Ga0207659_109957291	3300025926	Miscanthus Rhizosphere	MIPQLSIQERDRRYKLVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYLTNIGGFATEMFTVFP
Ga0207686_107177241	3300025934	Miscanthus Rhizosphere	MIPQLSIQERDRRYQKVRAEMTRRGVDVLLLPANTGRWEQLQGDSRYLTNIGG
Ga0210066_10464892	3300025951	Natural And Restored Wetlands	MVPQLSIQERDRRYQIVRAEMAKRGIDVLLLPANTGRWEQLQGDSR
Ga0210105_10775942	3300025966	Natural And Restored Wetlands	MVPQLSIQERDRRYQLVRGEMAKRGIDVLLLPANTGRWEQLQ
Ga0210102_10394642	3300025971	Natural And Restored Wetlands	MVPQLSIQERDRRYQIVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYLTNIGGFATEMFT
Ga0207676_111518321	3300026095	Switchgrass Rhizosphere	MGIPQLSIEERDRRYKVVRAEMAQRKIDVLLLPANTGRWEQLQGDSRYLTSIGGFATE
Ga0207675_1020667332	3300026118	Switchgrass Rhizosphere	MGIPQLSIEERDRRYKVVRAEMAQSKIDVLLLPANTGR
Ga0209131_13129341	3300026320	Grasslands Soil	MIPQLSIQERDRRYKNVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYLTNIGGFATE
Ga0209470_13452632	3300026324	Soil	MIPQLSIQERDRRYRKVREEMARRGIDCLLLPANTGRW
Ga0209803_11498001	3300026332	Soil	MQIPQLSLEERDRRYKKVRTEMARSNIDCLLLPANTGRWEQLQADSRYLTSIGG
Ga0209376_13468011	3300026540	Soil	MIPQLSIQERDRRYRKVREEMARSNIDCLLLPANTG
Ga0209161_104799571	3300026548	Soil	MQIPQLSLEERDRRYKKVRTEMARSNIDCLLLPANTGR
Ga0209074_102315412	3300027787	Agricultural Soil	MIPQLSIEERDRRYKIVRAEMAQRNIDVLLLPANTGRWEQLQGDSRYLTSIGGFATEV
Ga0209465_101927051	3300027874	Tropical Forest Soil	MIPQLSLQERDRRYRVVRAEMAQRGIDCLLLPANTGRWEQLQG
Ga0247662_10749481	3300028293	Soil	MIPQLSIQERDRRYKIVRAEMVKRGIDVLLLPANTGRWEQLQGD
Ga0307312_110501222	3300028828	Soil	MIPQLSIQERDRRYQMVRAEMAKRGIDVLILPANTGRWEQLQGDSRYLTSIGGFAT
Ga0307308_102223992	3300028884	Soil	MIPQLSIQERDRRYQMVRAEMAKRGIDVLILPANTGRWEQLQGD
Ga0307473_102974992	3300031820	Hardwood Forest Soil	MIPQLSLQERDRRYDKVRAEMARQGIDCLLLPANTGRWEQLQGDSRYLTTIGGFAT
Ga0315281_108937591	3300032163	Sediment	MIPQLSIEERDRRYKIVRAEMAKRGIDVLLLPANTGRWEQLQGDSRYLTSIGGFATE
Ga0307472_1001437251	3300032205	Hardwood Forest Soil	MIPQLSIQERDRRYKIVKAEMAKRGIDCLLLPANTG
Ga0316620_113322162	3300033480	Soil	MIPQISIQERDRRYQIVRAEMAKRGMDCLLLPANTGRWEQLQGDSRYLTTIGGFATEVF
Ga0316628_1043880981	3300033513	Soil	MIPQLSIEERDRRYKSVRAEMAKRGMDCLLLPANTGRWEQLQGD
Ga0364933_089775_612_773	3300034150	Sediment	MIPQLSIEERDRRYKIVRAQMAQRGIDCLLLPANTGRWEQMQADSRYISSIGGF
Ga0373958_0186190_365_535	3300034819	Rhizosphere Soil	MIPQLSIEERDRRYKIVRAEMVQRNIDVLLLPANTGRWEQLQGDSRYLTSIGGFATE

Hidden Markov Model


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