Metagenome / Metatranscriptome Family F082290

Basic Information
Family ID	F082290
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	57 residues
Representative Sequence	MTVNEIVDELRATRPQASDALRLQVMTIAARPAPRTPTLRERLRGRRRLALVVPAGAA
Number of Associated Samples	98
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	95.58 %
% of genes from short scaffolds (< 2000 bps)	92.92 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Bacteria (94.690 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.159 % of family members)
Environment Ontology (ENVO)	Unclassified (35.398 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.442 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.67% β-sheet: 0.00% Coil/Unstructured: 52.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF08281	Sigma70_r4_2	88.50
PF13193	AMP-binding_C	7.08
PF13932	GIDA_C	0.88
PF13419	HAD_2	0.88
PF12848	ABC_tran_Xtn	0.88
PF16326	ABC_tran_CTD	0.88
PF00005	ABC_tran	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.69 %
Unclassified	root	N/A	5.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.69 %
Unclassified	root	N/A	5.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.69 %
Unclassified	root	N/A	5.31 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	23.01 %
Unclassified	root	N/A	5.31 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23.01 %
Unclassified	root	N/A	5.31 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	12.39 %
Unclassified	root	N/A	5.31 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.42 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	12.39 %
Unclassified	root	N/A	5.31 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.31 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.42 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	4.42 %
Patulibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.31 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.42 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.65 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	1.77 %
Patulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.31 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.42 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.65 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1.77 %
Patulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_11091563	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300000891\|JGI10214J12806_10349733	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300000956\|JGI10216J12902_106336827	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300001991\|JGI24743J22301_10018577	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300001991\|JGI24743J22301_10101117	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300002074\|JGI24748J21848_1026128	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300003203\|JGI25406J46586_10007310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	5052	Open in IMG/M
3300003996\|Ga0055467_10161847	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300003996\|Ga0055467_10173604	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300003997\|Ga0055466_10082717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter	850	Open in IMG/M
3300004013\|Ga0055465_10169045	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300004156\|Ga0062589_101457521	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300004479\|Ga0062595_101290828	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300005334\|Ga0068869_101143087	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005341\|Ga0070691_10583404	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005353\|Ga0070669_100378035	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300005438\|Ga0070701_10162644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1294	Open in IMG/M
3300005438\|Ga0070701_10431041	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300005445\|Ga0070708_100178387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1985	Open in IMG/M
3300005455\|Ga0070663_101266196	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300005458\|Ga0070681_11601802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300005459\|Ga0068867_100138422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1900	Open in IMG/M
3300005459\|Ga0068867_100368395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1204	Open in IMG/M
3300005535\|Ga0070684_101141651	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300005548\|Ga0070665_100559980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1155	Open in IMG/M
3300005548\|Ga0070665_101011031	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300005549\|Ga0070704_100464266	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300005617\|Ga0068859_103076753	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005713\|Ga0066905_100964294	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300005718\|Ga0068866_10847225	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300005874\|Ga0075288_1036162	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300006042\|Ga0075368_10270021	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300006852\|Ga0075433_10485714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1088	Open in IMG/M
3300006871\|Ga0075434_101868841	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300009094\|Ga0111539_10859776	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300009098\|Ga0105245_10357087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1449	Open in IMG/M
3300009147\|Ga0114129_12079702	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300009156\|Ga0111538_10449607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1633	Open in IMG/M
3300009551\|Ga0105238_10928041	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300009551\|Ga0105238_11604468	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300009553\|Ga0105249_10252948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1747	Open in IMG/M
3300009553\|Ga0105249_10350834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1495	Open in IMG/M
3300010362\|Ga0126377_10233348	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300010371\|Ga0134125_10579339	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300010371\|Ga0134125_11598910	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300010399\|Ga0134127_10719007	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300011400\|Ga0137312_1062728	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300012094\|Ga0136638_10115584	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300012884\|Ga0157300_1083570	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300012911\|Ga0157301_10077760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	926	Open in IMG/M
3300012916\|Ga0157310_10351988	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300012916\|Ga0157310_10418086	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300012943\|Ga0164241_10610108	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300012951\|Ga0164300_10890355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300012955\|Ga0164298_10422875	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300012958\|Ga0164299_10923824	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300012960\|Ga0164301_10272524	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300013096\|Ga0157307_1073516	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300013102\|Ga0157371_10321733	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300013296\|Ga0157374_11406060	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300013307\|Ga0157372_11291129	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300013308\|Ga0157375_12001308	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300014263\|Ga0075324_1086013	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300014271\|Ga0075326_1193931	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300014311\|Ga0075322_1076038	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300018466\|Ga0190268_10149134	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300018466\|Ga0190268_10627496	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300018469\|Ga0190270_10362020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1324	Open in IMG/M
3300019356\|Ga0173481_10561649	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300020069\|Ga0197907_10746717	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300020081\|Ga0206354_10438317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300022883\|Ga0247786_1032890	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300023275\|Ga0247776_10216313	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300024055\|Ga0247794_10010339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2149	Open in IMG/M
3300024055\|Ga0247794_10031488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1376	Open in IMG/M
3300024055\|Ga0247794_10078352	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300025559\|Ga0210087_1069850	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300025791\|Ga0210115_1109246	Not Available	554	Open in IMG/M
3300025893\|Ga0207682_10107353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1226	Open in IMG/M
3300025899\|Ga0207642_10971163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300025907\|Ga0207645_10304128	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300025912\|Ga0207707_10518484	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300025918\|Ga0207662_10255159	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300025919\|Ga0207657_10981574	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300025924\|Ga0207694_10719813	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300025924\|Ga0207694_10975667	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300025925\|Ga0207650_11882928	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300025930\|Ga0207701_11598574	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300025944\|Ga0207661_11459880	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300025960\|Ga0207651_11209180	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300026067\|Ga0207678_11698107	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300026118\|Ga0207675_102429730	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300026121\|Ga0207683_10499065	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300027909\|Ga0209382_12001558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300028587\|Ga0247828_10034439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	2098	Open in IMG/M
3300028590\|Ga0247823_10356031	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300028590\|Ga0247823_10754041	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300028592\|Ga0247822_10219333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1427	Open in IMG/M
3300028608\|Ga0247819_10870610	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300028809\|Ga0247824_10380595	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300028812\|Ga0247825_10162837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1533	Open in IMG/M
3300030336\|Ga0247826_10302128	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300030336\|Ga0247826_10608796	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300031548\|Ga0307408_101654733	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300031847\|Ga0310907_10267714	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300031854\|Ga0310904_10181014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1254	Open in IMG/M
3300032179\|Ga0310889_10675916	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300033551\|Ga0247830_10398797	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.83%
Host-Associated	Host-Associated	37.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.75%
Plants	Host-Associated → Plants	37.17%
Aquatic	Environmental → Aquatic	7.08%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.66%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.62%
Marine	Environmental → Aquatic → Marine	5.31%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Sediment	Environmental → Aquatic → Sediment	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.93%
Loam	Environmental → Terrestrial → Soil → Loam	9.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.73%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.54%
Ice	Environmental → Aquatic → Freshwater → Ice	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.89%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.08%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.54%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.50%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.42%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.65%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.77%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002074	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1	Host-Associated	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300012094	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ858 (22.06)	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014311	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_110915632	3300000890	Soil	MTVNEIVDELRAGRPHASDALRLQVMSIAARPVPRRPTLSERFAGRRRLALLVPASAA
JGI10214J12806_103497331	3300000891	Soil	MTVNEIVDELRLARPHASDALRLQVMTVAARPLPRNTTLRERLARRRRVALLVPAGA
JGI10216J12902_1063368273	3300000956	Soil	MTVNEIVDELRATRPRASDALRLQVLAVASQPIVRRPSLLDRFRPPRRLLLAVPAAAGLA
JGI24743J22301_100185774	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPQPVSPTWRERLRDRRRLVLALPAAAAIA
JGI24743J22301_101011172	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	MTVNDIVDELRATRPRPSDALRLQVMTVAARPAPRTPTLRERLRGRRRLALLVPAG
JGI24748J21848_10261281	3300002074	Corn, Switchgrass And Miscanthus Rhizosphere	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPQPVSPTWRERLRD
JGI25406J46586_100073101	3300003203	Tabebuia Heterophylla Rhizosphere	VNEIVDELRATRPRPSEALRLQVFTVTSRPPTVETSLVSRLRLRRLVLLVPATAGLAVASAIAI
Ga0055467_101618471	3300003996	Natural And Restored Wetlands	MTVNEIVDELRGSRPRAGDALRLQVLTLASPQPVSPTLRERFRDRRRLVLALPAAAAVAVAAA
Ga0055467_101736042	3300003996	Natural And Restored Wetlands	MTVNEIVDELRATRPRASDALRLQVLTLASRPAPPARTLLGRTRVRRRLALLVPAAAAVA
Ga0055466_100827172	3300003997	Natural And Restored Wetlands	MTVNEIVDELRATRPRASDALRLQVLTLASRPAPPARTLLGRTRVRRRLALLVPAAAAVAVASAVVVGLT
Ga0055465_101690451	3300004013	Natural And Restored Wetlands	MTVNEIVDELRATRPGASDALRLQVLTLASRRPVAASSLRERLRGRRPLV
Ga0062589_1014575211	3300004156	Soil	MTVNEIVDELRGARPRASDALRLQVMTIAARPAPRTRTFVERLRGRRRLALLVPAGAAVAMAAAVVIG
Ga0062595_1012908281	3300004479	Soil	MTVNEIVDELGAARPRASDALRLQVLTHASVPPTRRPSLGERVRGRRRT
Ga0068869_1011430871	3300005334	Miscanthus Rhizosphere	MTVNEIVDELRGTRPRAGDALRVQVLTLASTPQPVSPTWQERFRDRRRLVLALPAAAAVA
Ga0070691_105834041	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPQPVSPTWRERLRDRRRLV
Ga0070669_1003780353	3300005353	Switchgrass Rhizosphere	MTVNEIVDELRGARPRASDALRLQVMTIAARPAPRTRTFGERLRGRRRLALLV
Ga0070701_101626441	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MTVNDIVDELRATRPRPSDALRLQVMTVAARPAPLTPTLRERLRGRRRLALLVPAGA
Ga0070701_104310411	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MTVNEIVDELGAARPRASEALRLQVLTHASMPPTRPPALGERVRRPHRA
Ga0070708_1001783871	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTVNEIVDELRGSRPRAGDALRLQVLTLASAPQPVSPTWRERLRDRRRLVLALPAAAA
Ga0070663_1012661962	3300005455	Corn Rhizosphere	MTVNEIVDELRATRPQASDALRLQVMTIAARPAPRTPTLRERLRGRRRLALVVPAGAA
Ga0070681_116018021	3300005458	Corn Rhizosphere	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPQPVSPTWRERLR
Ga0068867_1001384223	3300005459	Miscanthus Rhizosphere	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPQPVSPTWRERLRDRRRLVLALPAAAAIAVAAAVAV
Ga0068867_1003683953	3300005459	Miscanthus Rhizosphere	MTVNEIVDELGAARPRASDALRLQVLTHASMPPTRPPSLGERVRRPRRAMLALPVA
Ga0070684_1011416512	3300005535	Corn Rhizosphere	MTVNDIVDELRATRPRPSDALRLQVMTVAARPAPRTPTLRERLRGRRRLA
Ga0070665_1005599803	3300005548	Switchgrass Rhizosphere	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPQPVSPTWQERFRDRRRLVLALPAA
Ga0070665_1010110311	3300005548	Switchgrass Rhizosphere	MTVNEIVDELGAARPRASDALRLQVLTHASMRPTRPPSLGQRVRRPRRAMLAL
Ga0070704_1004642663	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MTVNEIVDELRAGRPHASEALRLQVMTIAARPVPRRRTLSERFGGRRRLALLVPAGA
Ga0068859_1030767532	3300005617	Switchgrass Rhizosphere	MTVNEIVDELGAARPRASDALRLQVLTHASMRPTRPPSLGERVRRPRRAMLAL
Ga0066905_1009642941	3300005713	Tropical Forest Soil	MTVNEIVDELRAARPRASDALRLQAMRIAAQPAPHAPTLRERLRRRRRLA
Ga0068866_108472251	3300005718	Miscanthus Rhizosphere	MTVNEIVDELGAARPRASDALRLQVLTHASMPPTRPPSLGERVRRPRRAMLALPVAVGLAVAAAVAVG
Ga0075288_10361623	3300005874	Rice Paddy Soil	MTVNEIVDELRATRPRASDALRLQVLTLASGPATPARTLLGRTRVRRRLALLV
Ga0075368_102700212	3300006042	Populus Endosphere	MTVNEIVDELRAGRPHASEALRLQVMTIAARPVPRRRTLSERFGGRRRLALLVPAGAT
Ga0075433_104857143	3300006852	Populus Rhizosphere	MTVNEIVDELRGSRPRAGDALRLQVLTLASAPQPVSPTWRERLRDRRRLVLA
Ga0075434_1018688411	3300006871	Populus Rhizosphere	MTVNEIVDELRAGRPHASDALRLQVMTIAARPVPRRRTLSERFGGRRRLALLVPAGATLALTAAVAIGIS
Ga0111539_108597763	3300009094	Populus Rhizosphere	MTVNEIVDELRAGRPHASDALRLQVMTVAARPVPRRPTLSERFGGRRRLALLVPAGAALA
Ga0105245_103570871	3300009098	Miscanthus Rhizosphere	MTVNEIVDELRAGRPHASDALRLQVMTIAARPVPRRRTLSERFGGRRRLALLVPAGATLA
Ga0114129_120797021	3300009147	Populus Rhizosphere	MNVTEIVDELRATRPRASDALRLQVLTLAASPPTRPPSLFERLRNRRL
Ga0111538_104496073	3300009156	Populus Rhizosphere	MTVNEIVDELRAGRPHASDALRLQVMTIAARPVPRRRTLSERFGGRRR
Ga0105238_109280411	3300009551	Corn Rhizosphere	MTVNEIVDELRGARPRASDALRLQVMTIAARPAPRTRTFGERVRGRRRLALLVPAGAAVAMAAAV
Ga0105238_116044682	3300009551	Corn Rhizosphere	MTVNEIVDELRGSRPLAGDALRLQVLTLASTPKPVSPTLRERFRDRRR
Ga0105249_102529481	3300009553	Switchgrass Rhizosphere	MTVNEIVDELRATRPQASDALRLQVMTIAARPAPRTPTLRERLRGRRR
Ga0105249_103508343	3300009553	Switchgrass Rhizosphere	MTVNEIVDELRGSRPRAGDALRLEVLTLASTPQPVSPTWRERLRDRRRLV
Ga0126377_102333484	3300010362	Tropical Forest Soil	MTVSEIVDELRATRPRAGEALRLQVLTLASQPAPAAPPARDRLRGRLRLGLLVPVA
Ga0134125_105793391	3300010371	Terrestrial Soil	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPKPVSPTLRERFRDRRRLMLALPAAATV
Ga0134125_115989101	3300010371	Terrestrial Soil	MTVNEIVDELRGARPRASDALRLQVMTIAARPAPRTRTFGERVRGRRRLALLVPAGAAVA
Ga0134127_107190071	3300010399	Terrestrial Soil	MTVNDIVDELRATRPRPSDALRLQVMTVAARPAPRTPTLRERLRGRRRLALLVPAGAAVALTAAVV
Ga0137312_10627282	3300011400	Soil	MSMTEIVDELRATRPRASDALRLQVLTAASRPPVRQPSFLDRIRGRRL
Ga0136638_101155841	3300012094	Polar Desert Sand	MNVTEIVDELRVTRPQASDALRLQVQALATRPPAAAPSLLDRLRGRRRLLLALPAAGALAMVSAIAIGVSQPTS
Ga0157300_10835701	3300012884	Soil	MTVNEIVDELRGTRPRAGDALRLQVLTLASTPQPVSPTLRERFRD
Ga0157301_100777601	3300012911	Soil	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPQPVSPTLRERFRDRRRLVLALPAAAAV
Ga0157310_103519882	3300012916	Soil	MTVNEIVDELRLARPHASDALRLQVMTIATRPAPRTRTFGERLRGRRRLALLVP
Ga0157310_104180861	3300012916	Soil	MTVNQIVDELRATRPAAGEALRLQVLTHASAPAVTEPSWRDRLRSRRRLLLA
Ga0164241_106101082	3300012943	Soil	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPQPVSPTLYERFRDRRRLVLALPAAAAVA
Ga0164300_108903551	3300012951	Soil	MTVNEIVDELGAARPRASDALRLQVLTHASVPPTRRPSLGERVRGRRRTL
Ga0164298_104228751	3300012955	Soil	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPQPVSHTWQERCRDRRRLVLAFPAAAA
Ga0164303_103801871	3300012957	Soil	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPQPVSPTWRERLRDRRRLVLALPAAAAIAVAAAVA
Ga0164299_109238242	3300012958	Soil	MTVNEIVDELGAARPRASDALRLQVLTHAAMPPTRQPSLGGRGRRPRRAMLALPVAAGLAVA
Ga0164301_102725243	3300012960	Soil	MTVNDIVDELRATRPRPSDALRLQVMTVAARPAPRTPTLRERLRGRRRLALLVPAGAAVALTAAVVVGIT
Ga0164305_101112903	3300012989	Soil	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPQPVSPTWQERFRDRRRLVLAFPAAAAVAVAAAVAIGVTRPSP
Ga0157307_10735162	3300013096	Soil	MTVNEIVDELRGSRPRAGDALRLQVLKLASTPRPVSPTLRERFRDRRRLMLA
Ga0157371_103217331	3300013102	Corn Rhizosphere	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPQPVSPTLRERFRNRRRLVLALP
Ga0157374_114060602	3300013296	Miscanthus Rhizosphere	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPQPVSPTWRERLRDRRRLVLALPAAA
Ga0157372_112911292	3300013307	Corn Rhizosphere	MTVNEIVDELRGARPRASDALRLQVMTIAARPAPRTRTFGERVRGRRRLALLVPAGAA
Ga0157375_120013081	3300013308	Miscanthus Rhizosphere	MTVNEIVDELRAGRPHASDALRLQVMTIAARPVPRRRTLSERFGGRRRLALLVPAGATLALTAAVAIGISRS
Ga0075324_10860132	3300014263	Natural And Restored Wetlands	MNVTEIVDELRVNQPRASDALRLQVLTAASHAPAPAPSLVDRIRG
Ga0075326_11939311	3300014271	Natural And Restored Wetlands	MTVNEIVDELRSTRPRASDALRLQVLSLASEPAAAPQPLLARFRNRRLALLVPATAA
Ga0075322_10760381	3300014311	Natural And Restored Wetlands	MTVNEIVDELRATRPRASDALRLQVLTLASGPATPARTLLGRTRVRRRLALLVP
Ga0190268_101491343	3300018466	Soil	MTVNEIVDELRASRPRASDALRLHVLAVASQPAAPRPSLLDRFRGPRRLVLALP
Ga0190268_106274962	3300018466	Soil	MSVNDIVDELRATRPQASDALRLQVLAVASQPIVRRPSLLDRFRPPRRLLLAVPAA
Ga0190270_103620203	3300018469	Soil	MTEIVDELRATRPRASDALRLQVLTAASRPPVRHPSFLDRIRGRRLALLVPAAAGLAVVSAV
Ga0173481_105616492	3300019356	Soil	MTVNEIVDELRAGRPHASDALRLQVMTIAARPVPRGPTLSERFGRRRRLALLVPAGAAL
Ga0197907_107467171	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MTVNDIVDELRATRPRPSDALRLQVMTVAARPAPRTPTLRERLRGRRRLALLVPAGAAVALTAA
Ga0206354_104383171	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MPVNEIVDELRGSRPRAGDALRLQVLTLASTPQPVSPTWRERLRDRRR
Ga0247786_10328903	3300022883	Soil	MTVNEIVDELRLARPHASDALRLQVMTVAARPLPRNTTLRERLAGRRRVALLVPAGAALALT
Ga0247785_10139202	3300022889	Soil	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPRPVSPTLRERFRDRRRLMLALPAAATVAVVAAVAV
Ga0247802_10697681	3300023077	Soil	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPRPVSPTLRERFRDRRRLMLALPAAATVAVVAA
Ga0247776_102163132	3300023275	Plant Litter	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPRPVSPTLRERFRDRRRLMLALPAA
Ga0247794_100103393	3300024055	Soil	MTVNEIVDELRAGRPHASDALRLQVMTVTARPVPRRPTLSERFGGRRRLALLVPAG
Ga0247794_100314883	3300024055	Soil	MTVNDIVDELRATRPRPSDALRLQVMTVAARPAPRTPTLRERLRGRRRLAL
Ga0247794_100783523	3300024055	Soil	MTVNQIVDELRATRPAAGEALRLQVLTHASAPAVTEPSWRDRLRSRRRLLLALPAAAGLA
Ga0210087_10698502	3300025559	Natural And Restored Wetlands	MTVNEIVDELRAARPRASDALRLQVLTLASRPAPPARTLLGRTRVRRRLAR
Ga0210115_11092461	3300025791	Natural And Restored Wetlands	MTVTEIVDELRATRPRASDALRLQVLTLASSPPSRERSLLDRIRGRRLALLVPAAAGLAVVS
Ga0207682_101073531	3300025893	Miscanthus Rhizosphere	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPRPVSPTLRERFRDRRRLMLALP
Ga0207642_109711631	3300025899	Miscanthus Rhizosphere	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPQPVSPTWRERLRDRR
Ga0207645_103041283	3300025907	Miscanthus Rhizosphere	MTVNEIVDELRGARPRASDALRLQVMTIAARPAPRTRTFGERVRGRRRLALLVPAGAAVAMAAAVVIGVT
Ga0207707_105184843	3300025912	Corn Rhizosphere	MTVNEIVDELRGARPRASDALRLQVMTIAARPAPRTRTFGERLRGRRRLALLVPAG
Ga0207662_102551592	3300025918	Switchgrass Rhizosphere	MTVNDIVDELRATRPRPSDALRLQVMTVAARPAPRTPTLRERLRGRRRLALLVPAGAAVA
Ga0207657_109815741	3300025919	Corn Rhizosphere	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPQPVSPTWRERLRDRRRLVLALPAAAAI
Ga0207694_107198133	3300025924	Corn Rhizosphere	MTVNEIVDELRGARPRASDALRLQVMTIAARPAPRTRTFGERVRGRRRLALLVPAGAAVAMAAAVVIGVTRS
Ga0207694_109756672	3300025924	Corn Rhizosphere	MTVNDIVDELRATRPRPSDALRLQVMTVAARPAPRTPTLRERLRGRRRLALLVPAGAAVALTAAV
Ga0207650_118829281	3300025925	Switchgrass Rhizosphere	MTVNEIVDELGAARPRASDALRLQVLTHASVPPTRRPSLGERVRVRR
Ga0207701_115985741	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTVNEIVDELRGARPRASDALRLQVMTIAARPAPRTRTFGERVRGRRRLALLVPAGAAVAMAAA
Ga0207690_100090697	3300025932	Corn Rhizosphere	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPRPVSPTLRERFR
Ga0207661_114598802	3300025944	Corn Rhizosphere	MTVNQIVDELRATRPAAGEALRLQVLTHASAPAVTEPSWRDRLRSRRRLLLALPA
Ga0207651_112091802	3300025960	Switchgrass Rhizosphere	MTVNEIVDELRGSRPRAGDALRLQVLTLASTPQPVSPTWRERLRDRRRLVLALPAAAAIAVAA
Ga0207678_116981071	3300026067	Corn Rhizosphere	MTVNDIVDELRETRPRASDALRLQIMTIAARPAPRNPTLGERLRGRRRLALIVPAGA
Ga0207675_1024297302	3300026118	Switchgrass Rhizosphere	MTVNEIVDELGAARPRASEALRLQVLTHASMPPTRPPALGERVRRPHRAMLALPVAA
Ga0207683_104990653	3300026121	Miscanthus Rhizosphere	MTVNEIVDELGAARPRASDALRLQVLTHASVPPTRRPSLGERVRGRRRTMLALPV
Ga0209382_120015582	3300027909	Populus Rhizosphere	MTVNEIVDELRGSRPRAGDALRLQVLTLASAPQPVSPTWRERLRDRRRLVL
Ga0247828_100344393	3300028587	Soil	MTEIVDELRATRPRASDALRLQVLTAASRPPVRHASFLDRVRGRRLALLVP
Ga0247823_103560313	3300028590	Soil	MTVNEIVDELRGARPRASDALRLQVMTIAARPAPRTRTFGERLRGRRRLALLVPAGAAVAMAAAGTRSAR
Ga0247823_107540411	3300028590	Soil	MTEIVDELRATRPRASDALRLQVLTAASRPPVRHASFLDRVRGRRLALLVPAA
Ga0247822_102193331	3300028592	Soil	MTEIVDELRATRPRASDALRLQVLTAASRPPVTQPSFLDRIRGRRLA
Ga0247819_108706101	3300028608	Soil	MSMTEIVDELRATRPRASDALRLQVLTAASRPPVRHASFLDRVRGRRLALLVPAAAG
Ga0247824_103805952	3300028809	Soil	MTVNEIVDELRATRPQASDALRLQVMTIAARPAPRTPTLGERLRGRRRLALVVPAGAALAMAA
Ga0247825_101628373	3300028812	Soil	MTEIVDELRATRPRASDALRLQVLTAASRPPVRQASFLDRIRGRRLALLVPA
Ga0247826_103021281	3300030336	Soil	MNVTEIVDELRATRPRASDALRLQVLTLAASPPTRPPSLFERLRNRRLVLLVPAAAGLGVAASVRTW
Ga0247826_106087963	3300030336	Soil	MNVTEIVDELRATRPRASDALRLQVLTAASRPLVPRASLLDRVRG
Ga0307408_1016547331	3300031548	Rhizosphere	MTVNEIVDELRQARPHASDALRLQVMTVASRPLPRNSTLRERLAGRRRVALLVPAGAALA
Ga0310907_102677143	3300031847	Soil	MNVTEIVDELRATRPRASDALRLQVLTLAASPPAKRPSLLDRLRHRRLVLLVPAA
Ga0310904_101810141	3300031854	Soil	MTVNEIVDELGAARPRASDALRLQVLTHASMPPTRPPSLGERVRRPRRAMLALPVAAGL
Ga0310889_106759162	3300032179	Soil	MTVNEIVDELRASRPRASDALRLQVLAVASQPAAPRPSLLDRFRGPRRLV
Ga0247830_103987971	3300033551	Soil	MTVNEIVDELRGARPRASDALRLQVMTIAARPAPRTRTFGERVRGRRRLALLVPAAAIATAAP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082290

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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