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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F082085 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 113 |
| Average Sequence Length | 63 residues |
| Representative Sequence | MRAIEARFTDKPVKLDDAKERRVLTALKMIYEGGSLDGKTADFPTRDLSSVVVGLHR |
| Number of Associated Samples | 88 |
| Number of Associated Scaffolds | 113 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 100.00 % |
| % of genes near scaffold ends (potentially truncated) | 2.65 % |
| % of genes from short scaffolds (< 2000 bps) | 0.88 % |
| Associated GOLD sequencing projects | 82 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.30 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (97.345 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (26.549 % of family members) |
| Environment Ontology (ENVO) | Unclassified (41.593 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (61.062 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 17.65% Coil/Unstructured: 82.35% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.30 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 113 Family Scaffolds |
|---|---|---|
| PF11949 | DUF3466 | 10.62 |
| PF07883 | Cupin_2 | 1.77 |
| PF00072 | Response_reg | 0.88 |
| PF08241 | Methyltransf_11 | 0.88 |
| PF00535 | Glycos_transf_2 | 0.88 |
| PF08269 | dCache_2 | 0.88 |
| PF17164 | DUF5122 | 0.88 |
| PF00583 | Acetyltransf_1 | 0.88 |
| PF02517 | Rce1-like | 0.88 |
| PF07228 | SpoIIE | 0.88 |
| PF09424 | YqeY | 0.88 |
| COG ID | Name | Functional Category | % Frequency in 113 Family Scaffolds |
|---|---|---|---|
| COG1266 | Membrane protease YdiL, CAAX protease family | Posttranslational modification, protein turnover, chaperones [O] | 0.88 |
| COG4449 | Predicted protease, Abi (CAAX) family | General function prediction only [R] | 0.88 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 97.35 % |
| All Organisms | root | All Organisms | 2.65 % |
| Visualization |
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| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300009012|Ga0066710_100330289 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium | 2246 | Open in IMG/M |
| 3300012285|Ga0137370_10042101 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium | 2421 | Open in IMG/M |
| 3300016404|Ga0182037_10509208 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia | 1010 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 26.55% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 13.27% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 7.08% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 7.08% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 6.19% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 4.42% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 3.54% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.54% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 2.65% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.65% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.65% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 1.77% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.77% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 1.77% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.89% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.89% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.89% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.89% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 0.89% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.89% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 0.89% |
| Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 0.89% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.89% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.89% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.89% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.89% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.89% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.89% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.89% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.89% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.89% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000597 | Forest soil microbial communities from Amazon forest - 2010 replicate II A1 | Environmental | Open in IMG/M |
| 3300001867 | Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705) | Environmental | Open in IMG/M |
| 3300002126 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 | Host-Associated | Open in IMG/M |
| 3300004006 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 | Environmental | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300004268 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300005175 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 | Environmental | Open in IMG/M |
| 3300005181 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 | Environmental | Open in IMG/M |
| 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 | Host-Associated | Open in IMG/M |
| 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 | Host-Associated | Open in IMG/M |
| 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
| 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
| 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Environmental | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
| 3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
| 3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
| 3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
| 3300010048 | Tropical forest soil microbial communities from Panama - MetaG Plot_11 | Environmental | Open in IMG/M |
| 3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
| 3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
| 3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
| 3300010361 | Tropical forest soil microbial communities from Panama - MetaG Plot_23 | Environmental | Open in IMG/M |
| 3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
| 3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
| 3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
| 3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
| 3300012202 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG | Environmental | Open in IMG/M |
| 3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
| 3300012285 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG | Environmental | Open in IMG/M |
| 3300012356 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG | Environmental | Open in IMG/M |
| 3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
| 3300012914 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2 | Environmental | Open in IMG/M |
| 3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
| 3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
| 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
| 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Host-Associated | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300016270 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 | Environmental | Open in IMG/M |
| 3300016294 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 | Environmental | Open in IMG/M |
| 3300016319 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H | Environmental | Open in IMG/M |
| 3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
| 3300016387 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 | Environmental | Open in IMG/M |
| 3300016404 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 | Environmental | Open in IMG/M |
| 3300016422 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 | Environmental | Open in IMG/M |
| 3300016445 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 | Environmental | Open in IMG/M |
| 3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
| 3300021411 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2 | Environmental | Open in IMG/M |
| 3300021413 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1 | Environmental | Open in IMG/M |
| 3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
| 3300023067 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5 | Environmental | Open in IMG/M |
| 3300025271 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) | Environmental | Open in IMG/M |
| 3300025552 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
| 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026557 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal | Environmental | Open in IMG/M |
| 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300030841 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 EcM (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030847 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031128 | Oak Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031562 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3 | Environmental | Open in IMG/M |
| 3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
| 3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
| 3300031744 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2) | Environmental | Open in IMG/M |
| 3300031833 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178 | Environmental | Open in IMG/M |
| 3300031910 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2) | Environmental | Open in IMG/M |
| 3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
| 3300031954 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2) | Environmental | Open in IMG/M |
| 3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
| 3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| 3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
| 3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
| 3300034115 | Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| AF_2010_repII_A1DRAFT_101553621 | 3300000597 | Forest Soil | MSVTAIAVRFTDKSGEADDDAEDHRVLNRLEVLYEGGSLDGKTADFPTRDLSSVMVGLHQHNRHVFETYKRTIC |
| JGI12627J18819_101189903 | 3300001867 | Forest Soil | MSLTTIAARLPDKPIKLDESDKPNVLRNLKIVYEGGSLDGKNADFPTRDLSRIVVGLHRGHWHFFETYKRTI |
| JGI24035J26624_10121071 | 3300002126 | Corn, Switchgrass And Miscanthus Rhizosphere | MKAIAARFTDKSVKLDTEKRRVLTTLKMIYEGGSLDGKTANFSTRDLSCVVVGVHRGN |
| Ga0055453_100390411 | 3300004006 | Natural And Restored Wetlands | MSLKTIAAHFTDKPVKVDDAQGRRILTTLKMIYEGGSLDGKTGNFPTRD |
| Ga0062593_1017944182 | 3300004114 | Soil | MSLQTIAARFTDKPLKQLDGAQERTVLTTLKMIYEGGSLDGKTATFPKRDVSSVVVGRHQGNWHLFETYKRTIWINL |
| Ga0062590_1003964122 | 3300004157 | Soil | MSLQTIAARFTDKPVQLDTAQEHRVLTTLKMIYEGGSLDGKA |
| Ga0066398_101106191 | 3300004268 | Tropical Forest Soil | MKVIEARFTDKPVKLDDAKERRVLTALKMIYEGGSLDGKTANFPTRDLSSVVVGLHRGNWHSFETYKRTIWVNVRNRRTIFRCT |
| Ga0063356_1057281062 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MSLQTIAARFTDKPVKLDGAQERRVLTTLKMIYEGGSLDGKTATFATRDLSCVVVGRHRGNWHFFET |
| Ga0066673_102444823 | 3300005175 | Soil | MRAIEARFTDKPVKLDDAKERRVSTALKMIYEGGSLDGKTANFPTRDLSSVVVGLHRGN |
| Ga0066678_107069161 | 3300005181 | Soil | MSMRAIEARFTDKPVKLDDAKERRVSTALKMIYEGGSLDG |
| Ga0065704_108551071 | 3300005289 | Switchgrass Rhizosphere | MRTITARFPDKPVKLDDAEDPRVLTTLKMIYEGGSLDGKIADLPTRDLSS |
| Ga0065712_100780845 | 3300005290 | Miscanthus Rhizosphere | MSLQTIAARFTDKPIKQLDGAQERTVLTTLKMIYEGGSLDGKTATFPKRDVSSVVVGRHQGNWHLFETYKRTIWINLCNRRTI |
| Ga0070683_1002858171 | 3300005329 | Corn Rhizosphere | MSLQTIAARFTDKPIKQLDGAQERTVLTTLKMIYEGGSLDGKTATFPKRDVSSVVVGRHQGNW |
| Ga0066388_1023952711 | 3300005332 | Tropical Forest Soil | MRTIEARFTDKPAKLDDAKEGRVSTALKMIYEGGSLDGKTGNF |
| Ga0066388_1032893082 | 3300005332 | Tropical Forest Soil | MRAIEARFTDKPVKLDNAKERRVLTALKMIYEGGSLDGKTANLPTR |
| Ga0066388_1045205411 | 3300005332 | Tropical Forest Soil | MRAIEARLTDKPVKLDDAKERRVLTALKMIYEGGSLDGKT |
| Ga0066388_1053081982 | 3300005332 | Tropical Forest Soil | MRAIEARFTDKPVKLDDTEEGRVLTALKMIYEGGSLDGRTVNLPTRDLS |
| Ga0070680_1013828381 | 3300005336 | Corn Rhizosphere | MSMKAIAARFTDKSVKLDTEKRRVLTTLKMIYEGGSLDGKTA |
| Ga0070708_1022550431 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MRAIAARFTDKSVKLDTEKRRVLTTLKMIYEGGSLDGKTANFST |
| Ga0070699_1011752382 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | MRAIAARFTDKPVKLGDAEERTVLTTLKMIYEGGSLDGKIADLPTRDLSCVVVGLHRGNWHFFETYNRTIWVNVRNRRTIFRCAGFTSKSN |
| Ga0066903_1006625963 | 3300005764 | Tropical Forest Soil | MSLTTITARFTDEPVKVEDADGRRVLTKLKMTYEGGLLDGENANFPTRDVSCVVVGLHRGNRHVFATYKRTISINPRNHRTIFRCSGVWSFPKGQAVVVSG* |
| Ga0066903_1021124573 | 3300005764 | Tropical Forest Soil | MVSTHRVPNQESKVTMSMKMIEARFTDRPVKLDDAKERRVLTAVKMIYEGGSLDGKPASFPTRDLSSVVVGLHRGNWHSFETYKRTIWVNVRNRRTIF |
| Ga0066903_1051742392 | 3300005764 | Tropical Forest Soil | MCMRTITAGFPDKPVKLDDAEDPRVLTTLKMIYEGGSLDGKIADLPTRDL |
| Ga0066710_1003302891 | 3300009012 | Grasslands Soil | MRAIEARFTDKPVKLDDAKERRVSTALKMIYEGGSLDGETANFPTRDLSSVVVGLHRGNWHFFETYKRTIWVNV |
| Ga0066710_1015173971 | 3300009012 | Grasslands Soil | MRAIAARFTDKSVKLDPEKRRVLTTLKMIYEGGSLDGKTANFSTRDLSC |
| Ga0126374_110637112 | 3300009792 | Tropical Forest Soil | MKMIEARFTDKPVKLDDAKERRVLTALKMIYEGGSLDGKHANFPTRDLS |
| Ga0126380_102824631 | 3300010043 | Tropical Forest Soil | MRAIEARFTDKTFKLDDAKERTALKMIYEGGSLDGRTVNLSTRDLSSVVVGLHRGNQHFFETYKRTIWVNVRNR |
| Ga0126380_119602431 | 3300010043 | Tropical Forest Soil | MRTIAARFTDKPVKPDDAEERRVLTALKMIYEGGSA |
| Ga0126380_120176361 | 3300010043 | Tropical Forest Soil | MRAIEARFTDNPVKLDDAKERTALKMIYEGGSLDGKTANLPTRDLSSVVVGLHRGNRHFFETYKRTIWVNVR |
| Ga0126384_102297202 | 3300010046 | Tropical Forest Soil | MSMRAITARFPDKPVKLDDAEDPRVLTTLKMIYEGGSLDGKIADLPTRDLS |
| Ga0126384_108912401 | 3300010046 | Tropical Forest Soil | MRAITARFTDKSVKPDDAENHRVLNKLEVLYEGGSLDGKTADFPTRDFSSVVVGLHLRNQHLF |
| Ga0126373_113900252 | 3300010048 | Tropical Forest Soil | MSMRAIEARFTDKPVKLDDTEEGRVLTALKMIYEGGSLDGRTVNLPTRDLS |
| Ga0126370_106031781 | 3300010358 | Tropical Forest Soil | MRAIMARLTDKPVKLDDAEEPRVLTTLKMTYEGGSLDGKIADLPTRDLAAVVIGLHRGN |
| Ga0126370_126347051 | 3300010358 | Tropical Forest Soil | MSMRAIEARFTDKPFKLDDAKERTALKMIYEGGSLDGKTANFPTRDLSSVVVGL |
| Ga0126376_124524851 | 3300010359 | Tropical Forest Soil | MRAIEFGFTDKSLRPSDAEEHRVLNTLKVLYQGGSLDGKTADFPTRDVSSVVFGLHRRNQHLFETYKRTICLNVRSGR |
| Ga0126372_110145742 | 3300010360 | Tropical Forest Soil | MKVIEARFTDKPVKLDDAKERRVLTALKMIYEGGSLDGKTANYPTRDPSCVVIGFHRRDCHFFETYKRTIWVNIRNRRTIF |
| Ga0126378_115403301 | 3300010361 | Tropical Forest Soil | MRAIMARLTDKPVKLDDAEEPRVLTTLKMIYEGGSLDGKIADLPTRDLSCLVVGL |
| Ga0126378_130471862 | 3300010361 | Tropical Forest Soil | VAKLEDAEEHRVLTTLKMIYEGGSLDSKIANFPTRDLSCVVVRFDRRDCHFFETYKLTIW |
| Ga0126377_104658264 | 3300010362 | Tropical Forest Soil | MRAITVPLTDKSVKPNDAEDHRVLNKLEVLYEGGSLDGKTADFPTRDVSSVVVGLHRRNQHLFETYKRTICL |
| Ga0126379_104814263 | 3300010366 | Tropical Forest Soil | MSMRAIEARFTDKPVKLDDTEESRVLTALKMIYEGGSLDG |
| Ga0126379_116095031 | 3300010366 | Tropical Forest Soil | MKVIEARFTDKPVKLDDAKERRVLTALKMIYEGGSLDGKPANFPTRDLSSVVVGLHRGNWHSFET |
| Ga0126381_1020716932 | 3300010376 | Tropical Forest Soil | MRTITAGFPDKPVKLDDAEDPRVLTTLKMIYEGGSLDGKIADLPTRDLSAVVVGLHRGNWHFFETYKRTI |
| Ga0126381_1039643001 | 3300010376 | Tropical Forest Soil | MRAIEARFTDKPVKLDNAKERRVLTALKMIYEGGSLDGKTANLPTRDISSVVVGLHRGNRHFFETYKRTIWV |
| Ga0126381_1041335331 | 3300010376 | Tropical Forest Soil | MSMRAIEARLTDKPVKLDDAEEPRVLTTLKMIYEGGSLD |
| Ga0126383_108527552 | 3300010398 | Tropical Forest Soil | MRAIAVGFTDKSVKPSDAEERRVLNTLKVLYQGGSLDGKAADFPTRDVSSVVVGLHRRNLHFFETYKRTISVDIRSRRTIFRWDGL |
| Ga0126383_116176592 | 3300010398 | Tropical Forest Soil | MSMRAIAARFTDKSIRLDTEKRRVLTTLKMIYEGGSLDGKTANFPT |
| Ga0137363_110933491 | 3300012202 | Vadose Zone Soil | MRTITAGFPDKAVKLDDAEDPRVLTTLKMIYEGGSLDGKIADFPTRDLSCVVVGLHRGNWHFF |
| Ga0137363_115693971 | 3300012202 | Vadose Zone Soil | MSLTTIAARLTDEPVKLDDADERRVLTTLKMTYEGGSLDGKVANFPTRDVSCVVIGLHRGNWHFFETYKRTTSVNTRNRRTVFRYSGGVTSKSA |
| Ga0137362_117053093 | 3300012205 | Vadose Zone Soil | MSLTTIVARLTDEPVKLGDADERRVLTTLKMTYEGGSVDGKVANFP |
| Ga0137370_100421013 | 3300012285 | Vadose Zone Soil | MSMRAIEARFTDKPVKLDDAKERRVSTALKMIYEGGSLDGKTANFPTRDLASVVVDLNRGNWHFFEMSKGRLMVNVSDW* |
| Ga0137371_111166691 | 3300012356 | Vadose Zone Soil | MSMRTIAARFTDKSVKLDPEKRRVLTTLKMIYEGGSLDGKTANFSTRDLSCVVVGLHRGNWHF |
| Ga0137360_104883693 | 3300012361 | Vadose Zone Soil | MSLTTIAARFTYEPVKLDGAQKRRVLTTLEMIYEGWSLDGKTANFSTRDLSSVVVGRHRGNWHFFETYK |
| Ga0157297_102014711 | 3300012914 | Soil | MSLQTIAARFTDKPLKQLDGAQERTVLTTLKMIYEGGSLDGKTATFPKRDVSSVVVGRHQGNWHLF |
| Ga0126375_103803301 | 3300012948 | Tropical Forest Soil | MRAITVPLTDKSVKPNDAEDQRVLNKLEVLYEGGSLDGKTADFPTRDVSSVVVGLHRRNQHLFETYKRTICLNVRSGRTIFRWAGLT |
| Ga0164301_103174071 | 3300012960 | Soil | MSLQTIAARFTDKPIKQLDGAQERTVLTTLKMIYEGGSLDGKTATFPK |
| Ga0164301_117682831 | 3300012960 | Soil | MSMKAITARLTDKPVKLDDAEEPRVLTTLKMIYEGGSLDGKTADLPTRDLS |
| Ga0164302_116973821 | 3300012961 | Soil | MSLQTIAARFTDKPIKQLDGAQERTVLTTLKMIYEGGSLDGKTATFPKRDVSSVVVGRHQGNWHLFETYKCTIWINLRNRRTI |
| Ga0126369_101881233 | 3300012971 | Tropical Forest Soil | MRAIMARLTDKPVKLDVAEEPRVLTTLKMTYEGGSLDGKIADLPTCDLAAVVIGLHRGNWHF |
| Ga0126369_114291351 | 3300012971 | Tropical Forest Soil | MSTRAIEARFTDKPVKLDDAKERRVLTALKMIYEGGSLDGKTANFPTRDLSSVVVGLHRGNW |
| Ga0126369_114591491 | 3300012971 | Tropical Forest Soil | MRGITARFPEKSVKLGGVEEHRVLTTLGLLYEGGSLDGKTANFPTRDLSSVV |
| Ga0126369_133153551 | 3300012971 | Tropical Forest Soil | MRAIATRFTDKSVKLDTGKRRVLTTLKMIYEGGSLDGKTANFPTRDVSCVVVGLHRGNWHFFETYKRTMWINIRNRRTIFRCAGFTS |
| Ga0164304_102477571 | 3300012986 | Soil | MSMRAIEARFTDKPVKLDDAKERRVSTALKMIYEGGSLDGKTANFPTRDLSSVVVGPPPG |
| Ga0164307_109293072 | 3300012987 | Soil | MFMRTITARFPDKPVKLDDAEGPRVLTTLKIIYECGSLDGNIAALLARDLSCVVAGLHRGNWHFFETYKRTIWI |
| Ga0157372_101510243 | 3300013307 | Corn Rhizosphere | MSMKAIAARFTDKSVKLDTEKRRVLTTLKMIYEGGSLDGKTANFSTRDLSCVVVGVHRGNWHFFDL* |
| Ga0182006_10657002 | 3300015261 | Rhizosphere | MSLQTIAARFTDKPVKLHTAQEHRVLTTLKMVYEGGSLDGKAANFPTRDIACIVVGRHRRNWHSFETYKRTIWINLRNGRT |
| Ga0132258_109618031 | 3300015371 | Arabidopsis Rhizosphere | MIEARFTDNPVKLDGAQERRVLTTLKMIYQGGSLDGKTSNFPTRDVSTVVVGRHRGNLHFFES |
| Ga0132257_1008890862 | 3300015373 | Arabidopsis Rhizosphere | MIEARFTDNPVKLDGAQERRVLTTLKMIYQGGSLDGKTSNFPTRDVSTVVVGRHRG |
| Ga0132257_1011453042 | 3300015373 | Arabidopsis Rhizosphere | MSLKTIAARFTDEPVKFDGAQEHTVLTTLKMVYEGGSLDGKTANFSSRDVDCVVIGHHRGNWHSFETYKRTIWINL |
| Ga0182036_108780631 | 3300016270 | Soil | MKVIEARFTDKPVKPDVTKDRRVLTSLKMIYEGGSFDGKTANLPTRDLSGVVVG |
| Ga0182041_101628771 | 3300016294 | Soil | MRAIEARFTDKPVKLDDAKERRVLTALKMIYEGGSLDGKTANFHTRDLSSVVVGLHRRNWHFFETYKRTTWVNVRNR |
| Ga0182033_106693991 | 3300016319 | Soil | MKVIEARFTDKPVKPDVTKDRRVLTSLKMIYEGGSFDGKTANLPTRDLSGVVVGLHQGNWHV |
| Ga0182034_104163231 | 3300016371 | Soil | MRAIEAGFTDKPVKLDIAKERSVLTALKMIYEGGSLDGKTANLPTRDL |
| Ga0182040_117242811 | 3300016387 | Soil | MRAIEARFTDKPVKLDDAEEPRVLTTLKMIYEGGSLDGEIADLPTRDLSAVVVGLHRGKWHFFETYKRTIHVNSRNRRTIFHYAGLI |
| Ga0182037_105092081 | 3300016404 | Soil | MRAIEARFTDKPVKLDDAKERRVLTALKMIYEGGSLDGKTADFPTRDLSSVVVGLHR |
| Ga0182037_119671392 | 3300016404 | Soil | MSIRAIEAQFTDKPVKLDNAKERRVLTALKMIYEGGSLDGKTADFPTRDLSSVVVGLHR |
| Ga0182039_105201551 | 3300016422 | Soil | MRAIEARFTDKPVKLDDTEEGRVLTALKMIIRGASLTAKLAIFPRRDLSAWGFGFTG |
| Ga0182038_116384731 | 3300016445 | Soil | MRAIEARFTDKPVKLDDAKERRVLTALKMIYEGGSLDGKT |
| Ga0210407_110457921 | 3300020579 | Soil | MSLTTIAARFTDEPVKLDDADERKVLTTLKMTYEGGSLDGKTANFPTRDVSC |
| Ga0193709_11169631 | 3300021411 | Soil | MRAIEARFTDKPVKLDDAKERRVSTALKMIYEGGSLDGKIADLPTRDLSCVVAGLHRVNWHFFETYKRTIWINLRNGRTIFRFAGSTVKSN |
| Ga0193750_10966871 | 3300021413 | Soil | MSLTTIAARFTDEPVKLDDADERRVLTTLKMTYEGGPLDGKTANLPTRDVSCVVIGLHRGNWHFFQTYKRTISINIDNRRTIFRCSGG |
| Ga0126371_108194533 | 3300021560 | Tropical Forest Soil | MKVIEARFTDKPVKLDDAKERRVLTALKMIYEGGSLDGKPANFPTRDLSSVVVGLHRGNWHSFETY |
| Ga0126371_122045821 | 3300021560 | Tropical Forest Soil | MRAIATRFTDKSVKLDTGKRRVLTTLKMIYEGGSLDGNTANFPTRDVSCVV |
| Ga0126371_126393651 | 3300021560 | Tropical Forest Soil | MRTIEARFGDKPIKLDNAKERKVLTGLKMVYEGGSLDGKTANFPTRDFSSVVVGLHRGNWHFFETYK |
| Ga0126371_136571971 | 3300021560 | Tropical Forest Soil | MRSIEAGFTDKPVKLDIAKERSVLTALKMIYEGGSLDGKTANFPTRDLSSVVVGLHRGNWHSFETY |
| Ga0247743_10291842 | 3300023067 | Soil | MSLQTIAARFTDKPLKQLDGAQERTVLTTLKMIYEGGSLDGKTATFPKRDVS |
| Ga0207666_10112951 | 3300025271 | Corn, Switchgrass And Miscanthus Rhizosphere | MKAIAARFTDKSVKLDTEKRRVLTTLKMIYEGGSLDGKTANFSTRDLSCVVVGVHRGNWHFFETYNRTIWVNIRNRRTIFRCAGFTSKSN |
| Ga0210142_10652362 | 3300025552 | Natural And Restored Wetlands | MSLSTIAARFADRSAKVDGPVERRVLTTLKMIYEGGSLDGKTGNFPTRDVSCVVAGIHRGKSHV |
| Ga0207684_109135202 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MRAIAARFTDKPVKLGDAEERTVLTTLKMIYEGGSLDGKIADLPTRDLSCVVVGLHRGNWHFFETYNRTIWVNVRN |
| Ga0207646_103489454 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MRAIAARFTDKSVKLDTEKRRVLTTLKMIYEGGSLDGK |
| Ga0207701_104596252 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | MSLQTIAARFTDKPLKQLDGAQERTVLTTLKMIYEGGSLDGKTATFPKRDVSSVVVGRHQGNWHLFETYKRTIWINLCNRRTIFRCAGHTVISSK |
| Ga0207690_103403313 | 3300025932 | Corn Rhizosphere | MKAIAARFTDKSVKLDTEKRRVLTTLKMIYEGGSLDGKTANFSTRDLSRVVVGVHR |
| Ga0207661_111318891 | 3300025944 | Corn Rhizosphere | MTAILVRFPNESVKLDCVEKRRVLTTLAVIYEGGS |
| Ga0207712_102078884 | 3300025961 | Switchgrass Rhizosphere | MKAIAARFTDKSVKLNTEKRRVLTTLKMIYEGGSLDGKTANFSTRDLSCVVVGVHRGNW |
| Ga0179587_107036241 | 3300026557 | Vadose Zone Soil | MRTIEARFTDKPVKLDDAKERRVSTALQMIYEGGSLDGKTANF |
| Ga0268264_103540193 | 3300028381 | Switchgrass Rhizosphere | MKAIAARFTDKSVKLDTEKRRVLTTLKMIYEGGSLDGKTANFSTRDLSCVVVGVHRGNWHFFD |
| Ga0075384_112962401 | 3300030841 | Soil | MRAIATRFTDKSVKLDTEKRRVLTTLKMIYEGGSL |
| Ga0075405_116958611 | 3300030847 | Soil | MSLTTITVQFPDESVELDNVKERRVLTTLKMMYEGGSLDGKTANFPTRDLSCVVAGLHRGNWHFFENYKRTIWINLRNGRTIFRCADSTIKS |
| Ga0170823_118385061 | 3300031128 | Forest Soil | MKAIAARFTDKSVKLDTEKRRVLTTLKMIYEGGSLDGKTANFSTRDLSCVVVG |
| Ga0170824_1205977632 | 3300031231 | Forest Soil | MTAITVRIPDESVELDNVDERRVLTTLKIIYEGGSLDGKTANFSTRDLSCVVVGLHRGNWHFFE |
| Ga0310886_103297091 | 3300031562 | Soil | MSLQTIAARFTDKPVKLDGAQERRVLTTLKMIYEGGSLDGKTANFPTRDLSCVVVGRHRGNWHFFETYKRTIWINLRNGRTIFRCA |
| Ga0307469_123307171 | 3300031720 | Hardwood Forest Soil | MSLTTIAARFTDEPVKLGDADERRVLTTLKMTYEGGSVDGKVANFPTRDVSCVVIGLH |
| Ga0307468_1011284551 | 3300031740 | Hardwood Forest Soil | MRAIEARFTDKPVKLDDAKERRVSTLKMIYEGGSLDGKTANFPTRDLSSVVVGLHRGNWHFFETYKRTIWINVRNQRTIFRWAGLTVK |
| Ga0306918_104202861 | 3300031744 | Soil | MRAIEARFTDKPVKLDDAKERRVLTALKMIYEGGSLDGK |
| Ga0310917_107305672 | 3300031833 | Soil | MKTIEARLTDRPVKLDNAKERRDLTALKMIYEGGSLDGKTANFPTRDLSSVVVGLHRGNWHFFETYKRTIWVNVRNRRTIFRWAGLTV |
| Ga0306923_107248853 | 3300031910 | Soil | MSIRAIEAQFTDKPVKLDNAKERRVLTALKMIYEGGSLDGKTANFRTRDLSSVVVGLHRGNWHFF |
| Ga0306921_102445354 | 3300031912 | Soil | MRAIEARFTDKPVKLDDAKERRVLTALKMIYEGGSLDGKTADFPTRDLSSVVVGLHRGNWHFFETYKRTIWVNVRNRRTIFRWA |
| Ga0306926_130364511 | 3300031954 | Soil | MRVIEARFTDKPVKLDNAKERRVLTALKMIYEGGSLDGKTVNLPTRDVSCVVVGLHRGNRHFFETYK |
| Ga0307479_106535713 | 3300031962 | Hardwood Forest Soil | MSLTTIAARFADEPVKLDDTDERKVLTTLKMTYEGGSLDGKTANFPTRDVSCVVSGLHRGNRHFFETY |
| Ga0306922_120607621 | 3300032001 | Soil | MRAIEARFTDKPVKLDDTEEGRVLTALKMIYEGGSLDGKTADFPRRDLSSVVVGLHRGNWHFFETYKRTIWVNVRNRRTIFRWAG |
| Ga0307471_1010525852 | 3300032180 | Hardwood Forest Soil | MKAITARLTDKPVKLDDAEEPRVLTTLKMIYEGGSLDGKTADLPT |
| Ga0307472_1020991081 | 3300032205 | Hardwood Forest Soil | MSLTTITARLTGEPVKLDDADKRRVLTTLKMTYEGGSVDGKVANFPTRDVSCVVIGLHRGNWHFFETYKRTTSINTRNR |
| Ga0306920_1021619782 | 3300032261 | Soil | MRAIEARFTDKSIKLDNAQERRVLTALKMIYEGGSLDGKTANLPTRDVSSVVVG |
| Ga0364945_0160693_563_676 | 3300034115 | Sediment | MSLQMIAARFTDKPVKLESAQERRVLTTLKMIYEGGSL |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |