Metagenome / Metatranscriptome Family F082084

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082084
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	86 residues
Representative Sequence	VVFQVEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVPDAA
Number of Associated Samples	98
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	38.94 %
% of genes near scaffold ends (potentially truncated)	47.79 %
% of genes from short scaffolds (< 2000 bps)	95.58 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (77.876 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil (66.372 % of family members)
Environment Ontology (ENVO)	Unclassified (84.956 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (85.841 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.67% β-sheet: 7.14% Coil/Unstructured: 51.19%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13185	GAF_2	5.31
PF05977	MFS_3	2.65
PF00210	Ferritin	1.77
PF01590	GAF	1.77
PF13701	DDE_Tnp_1_4	0.88
PF13673	Acetyltransf_10	0.88
PF02954	HTH_8	0.88
PF00583	Acetyltransf_1	0.88
PF13899	Thioredoxin_7	0.88
PF01610	DDE_Tnp_ISL3	0.88
PF02482	Ribosomal_S30AE	0.88
PF14106	DUF4279	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	2.65
COG1544	Ribosome-associated translation inhibitor RaiA	Translation, ribosomal structure and biogenesis [J]	0.88
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.88 %
All Organisms	root	All Organisms	22.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.88 %
cellular organisms	root	All Organisms → cellular organisms	22.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	21.24 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.42 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.88 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	2.65 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.88 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.65 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.88 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.65 %
unclassified candidate division NC10	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.88 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2.65 %
candidate division NC10 bacterium CSP1-5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	0.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005172\|Ga0066683_10241624	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300005175\|Ga0066673_10366840	Not Available	840	Open in IMG/M
3300005179\|Ga0066684_10990216	Not Available	543	Open in IMG/M
3300005180\|Ga0066685_10516547	Not Available	826	Open in IMG/M
3300005186\|Ga0066676_10637193	Not Available	724	Open in IMG/M
3300005445\|Ga0070708_100438713	Not Available	1232	Open in IMG/M
3300005446\|Ga0066686_10256337	Not Available	1182	Open in IMG/M
3300005450\|Ga0066682_10270882	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1094	Open in IMG/M
3300005451\|Ga0066681_10578428	Not Available	693	Open in IMG/M
3300005552\|Ga0066701_10546571	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300005555\|Ga0066692_10609137	Not Available	685	Open in IMG/M
3300005557\|Ga0066704_10768242	Not Available	601	Open in IMG/M
3300006046\|Ga0066652_101111539	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300009012\|Ga0066710_100830783	Not Available	1418	Open in IMG/M
3300009012\|Ga0066710_101637030	All Organisms → cellular organisms → Bacteria → Acidobacteria	984	Open in IMG/M
3300009012\|Ga0066710_102092505	Not Available	833	Open in IMG/M
3300009012\|Ga0066710_104611817	Not Available	515	Open in IMG/M
3300009137\|Ga0066709_100241668	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	2409	Open in IMG/M
3300009137\|Ga0066709_101857562	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	841	Open in IMG/M
3300009137\|Ga0066709_102993586	Not Available	620	Open in IMG/M
3300010061\|Ga0127462_145098	Not Available	864	Open in IMG/M
3300010066\|Ga0127427_115039	Not Available	627	Open in IMG/M
3300010069\|Ga0127467_118631	Not Available	581	Open in IMG/M
3300010072\|Ga0127428_124856	Not Available	659	Open in IMG/M
3300010080\|Ga0127448_141079	Not Available	656	Open in IMG/M
3300010084\|Ga0127461_1097420	Not Available	663	Open in IMG/M
3300010085\|Ga0127445_1043981	Not Available	559	Open in IMG/M
3300010086\|Ga0127496_1085372	Not Available	501	Open in IMG/M
3300010088\|Ga0127476_1045481	Not Available	549	Open in IMG/M
3300010091\|Ga0127485_1033865	Not Available	825	Open in IMG/M
3300010091\|Ga0127485_1082087	Not Available	797	Open in IMG/M
3300010092\|Ga0127468_1062579	Not Available	559	Open in IMG/M
3300010093\|Ga0127490_1099756	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300010095\|Ga0127475_1034602	Not Available	648	Open in IMG/M
3300010097\|Ga0127501_1034078	Not Available	545	Open in IMG/M
3300010097\|Ga0127501_1087263	Not Available	504	Open in IMG/M
3300010099\|Ga0127450_1128324	Not Available	724	Open in IMG/M
3300010100\|Ga0127440_1019004	Not Available	602	Open in IMG/M
3300010102\|Ga0127453_1036791	Not Available	513	Open in IMG/M
3300010103\|Ga0127500_1025495	Not Available	533	Open in IMG/M
3300010107\|Ga0127494_1005056	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300010107\|Ga0127494_1116583	Not Available	572	Open in IMG/M
3300010108\|Ga0127474_1066965	Not Available	554	Open in IMG/M
3300010109\|Ga0127497_1021484	Not Available	542	Open in IMG/M
3300010111\|Ga0127491_1120574	Not Available	657	Open in IMG/M
3300010111\|Ga0127491_1136938	Not Available	562	Open in IMG/M
3300010112\|Ga0127458_1092643	Not Available	528	Open in IMG/M
3300010116\|Ga0127466_1126374	Not Available	519	Open in IMG/M
3300010118\|Ga0127465_1140026	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300010120\|Ga0127451_1060873	Not Available	781	Open in IMG/M
3300010122\|Ga0127488_1032576	Not Available	611	Open in IMG/M
3300010122\|Ga0127488_1085186	Not Available	828	Open in IMG/M
3300010125\|Ga0127443_1031894	Not Available	564	Open in IMG/M
3300010126\|Ga0127482_1161866	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300010128\|Ga0127486_1068349	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300010130\|Ga0127493_1009903	Not Available	543	Open in IMG/M
3300010136\|Ga0127447_1028234	Not Available	761	Open in IMG/M
3300010142\|Ga0127483_1266103	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300010301\|Ga0134070_10305971	Not Available	607	Open in IMG/M
3300010304\|Ga0134088_10360162	Not Available	706	Open in IMG/M
3300010323\|Ga0134086_10160957	Not Available	823	Open in IMG/M
3300010329\|Ga0134111_10028523	All Organisms → cellular organisms → Bacteria	1934	Open in IMG/M
3300010333\|Ga0134080_10697644	Not Available	503	Open in IMG/M
3300010336\|Ga0134071_10442501	Not Available	666	Open in IMG/M
3300010895\|Ga0138113_143518	Not Available	501	Open in IMG/M
3300010905\|Ga0138112_1030760	Not Available	737	Open in IMG/M
3300010905\|Ga0138112_1073311	Not Available	650	Open in IMG/M
3300012199\|Ga0137383_10302766	Not Available	1171	Open in IMG/M
3300012206\|Ga0137380_10017750	All Organisms → cellular organisms → Archaea	6516	Open in IMG/M
3300012206\|Ga0137380_10043032	All Organisms → cellular organisms → Bacteria → Proteobacteria	4155	Open in IMG/M
3300012207\|Ga0137381_10047862	All Organisms → cellular organisms → Bacteria → Proteobacteria	3521	Open in IMG/M
3300012209\|Ga0137379_10403784	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300012210\|Ga0137378_11192276	Not Available	677	Open in IMG/M
3300012351\|Ga0137386_10050705	All Organisms → cellular organisms → Bacteria	2866	Open in IMG/M
3300012355\|Ga0137369_10633516	Not Available	741	Open in IMG/M
3300012355\|Ga0137369_10709777	Not Available	691	Open in IMG/M
3300012359\|Ga0137385_10467283	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300012372\|Ga0134037_1055491	Not Available	624	Open in IMG/M
3300012373\|Ga0134042_1101926	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300012376\|Ga0134032_1110830	Not Available	693	Open in IMG/M
3300012378\|Ga0134025_1142758	Not Available	583	Open in IMG/M
3300012381\|Ga0134026_1170114	Not Available	512	Open in IMG/M
3300012381\|Ga0134026_1180177	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	846	Open in IMG/M
3300012382\|Ga0134038_1177676	Not Available	636	Open in IMG/M
3300012384\|Ga0134036_1009708	Not Available	633	Open in IMG/M
3300012386\|Ga0134046_1004922	Not Available	560	Open in IMG/M
3300012388\|Ga0134031_1178281	Not Available	738	Open in IMG/M
3300012388\|Ga0134031_1238201	Not Available	589	Open in IMG/M
3300012390\|Ga0134054_1161030	Not Available	816	Open in IMG/M
3300012391\|Ga0134035_1071030	Not Available	587	Open in IMG/M
3300012393\|Ga0134052_1160568	Not Available	623	Open in IMG/M
3300012396\|Ga0134057_1017090	Not Available	599	Open in IMG/M
3300012397\|Ga0134056_1050616	Not Available	502	Open in IMG/M
3300012398\|Ga0134051_1102764	Not Available	597	Open in IMG/M
3300012400\|Ga0134048_1306420	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300012406\|Ga0134053_1117862	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300012407\|Ga0134050_1298142	Not Available	530	Open in IMG/M
3300012409\|Ga0134045_1299464	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300012929\|Ga0137404_12099273	Not Available	528	Open in IMG/M
3300012972\|Ga0134077_10387738	Not Available	601	Open in IMG/M
3300012975\|Ga0134110_10092776	Not Available	1215	Open in IMG/M
3300012976\|Ga0134076_10424259	Not Available	596	Open in IMG/M
3300014166\|Ga0134079_10246064	Not Available	771	Open in IMG/M
3300015358\|Ga0134089_10089323	Not Available	1169	Open in IMG/M
3300017656\|Ga0134112_10397057	Not Available	569	Open in IMG/M
3300017657\|Ga0134074_1386045	Not Available	520	Open in IMG/M
3300018431\|Ga0066655_10399814	Not Available	906	Open in IMG/M
3300018433\|Ga0066667_11077364	Not Available	695	Open in IMG/M
3300018482\|Ga0066669_10673405	Not Available	911	Open in IMG/M
3300019255\|Ga0184643_1391219	Not Available	523	Open in IMG/M
3300019259\|Ga0184646_1060057	Not Available	501	Open in IMG/M
3300019458\|Ga0187892_10255205	Not Available	899	Open in IMG/M
3300021307\|Ga0179585_1181939	Not Available	571	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.23%
Aquatic	Environmental → Aquatic	1.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.35%
Freshwater	Environmental → Aquatic → Freshwater	1.77%
Cave	Environmental → Terrestrial → Cave	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.58%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.77%
Loam	Environmental → Terrestrial → Soil → Loam	1.77%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	76.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.58%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	66.37%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.85%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010061	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010066	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010069	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010072	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010080	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010084	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010085	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010086	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010088	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010091	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010092	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010093	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010095	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010097	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010099	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010100	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010102	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010103	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010107	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010108	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010109	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010111	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010112	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010116	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010118	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010120	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010122	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010125	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010126	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010128	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010130	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010136	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010142	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010895	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010905	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012372	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012378	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012381	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012382	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012384	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012388	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012391	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066683_102416241	3300005172	Soil	VVFQVEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDWPDAA*
Ga0066673_103668401	3300005175	Soil	VVFQVEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0066684_109902162	3300005179	Soil	SPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPEVSDAA*
Ga0066685_105165471	3300005180	Soil	VVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0066676_106371931	3300005186	Soil	VVFQVEVKMLVSALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTKDRSAPVPDVPDAA*
Ga0070708_1004387132	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VVFQVEVKMLVSALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTKDRSAPVPDLPNAA*
Ga0066686_102563373	3300005446	Soil	VVFQMEVKMLVPTLSPVGLPEGPSAVLDVTATFAPLFFGLVFALGLCVLGLAIATAIHDTWWEKRQGQKTKDRSAPVPDLPNAA*
Ga0066682_102708821	3300005450	Soil	MEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPEVSDAA*
Ga0066681_105784281	3300005451	Soil	VVFQVEVKMLVPALSPVGLPEGPSAVLDLTTTFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPEVSDAA*
Ga0066701_105465712	3300005552	Soil	VVFQVEVKMLVPALSLFGLPEGPSAVLDLTADFAPLFFGLVFALGLCVLGSAIATAIHDTWWEKRQGQKTTDRPAPVPDVPDAA*
Ga0066692_106091372	3300005555	Soil	VVFQVEVKMLVPALSLFGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTKDRSAPVPDLPNAA*
Ga0066704_107682422	3300005557	Soil	VVFQMEVKMLVPTLSPVGLPEGPSAVLDVTATFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTTDRPAPVPDVPDAA*
Ga0066652_1011115391	3300006046	Soil	MLVPALSLFGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0066710_1008307831	3300009012	Grasslands Soil	VVFQMEVKMLVPTLSPVGLPEGPSAVLDVTATFAPLFFGLVFALGLCVLGLAIATAIHDTWWEKRQGQKTKDRSAPVPDLPNAA
Ga0066710_1016370301	3300009012	Grasslands Soil	LSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVVTAIHDTWWEKRQGQKTTDRPAPVPDVPDAA
Ga0066710_1020925051	3300009012	Grasslands Soil	VVFQVEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA
Ga0066710_1046118171	3300009012	Grasslands Soil	LSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTKDRSAPVPDVPDAA
Ga0066709_1002416684	3300009137	Grasslands Soil	MLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTTDRPAPVPDVPDAA*
Ga0066709_1018575621	3300009137	Grasslands Soil	MEVKMLVPALSLFGLPEGPSAVLDLTADFAPLFFGLVFTLGLCILGLAVATAIHDTWWEKRQGKKTTDRRAPVPDVSDAA*
Ga0066709_1029935861	3300009137	Grasslands Soil	VLYRSAKGRTNNGRTPVVFQVEVKMLVSALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTKDRSAPVPDVPDAA*
Ga0127462_1450981	3300010061	Grasslands Soil	MEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0127427_1150391	3300010066	Grasslands Soil	NNGRTPVVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFSMAVALGLCILGLAVATAIHDTWWEKRQGKKTTDRRAPVPDVSDAA*
Ga0127467_1186311	3300010069	Grasslands Soil	YRSAKGRTINGRTPVVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0127428_1248562	3300010072	Grasslands Soil	MEVKMLVPALSPVGLPEGPSAVLDLTADFAPLFFGLVFTLGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0127448_1410791	3300010080	Grasslands Soil	VVFQVEVKMLVSALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDWPDAA*
Ga0127461_10974202	3300010084	Grasslands Soil	VLYRSAKGRTNNGRTPVVFQVEVKMLVSALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVPDAA*
Ga0127445_10439811	3300010085	Grasslands Soil	MLVSALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTKDRSAPVPDLPNAA*
Ga0127496_10853721	3300010086	Grasslands Soil	VLYRSAKGRTNNGRTPVVFQVEVKMLVSALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGKKTTDRRAPVPDVSDAA*
Ga0127476_10454811	3300010088	Grasslands Soil	VVFQVEVKMLVPALSPVGLPEGPSAVLDLTTTFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVPDAA*
Ga0127485_10338652	3300010091	Grasslands Soil	ANNGRTLVVFQMEVKMLVPTLSPVGLPEGPSAVLDVTATFAPLFFGLVFALGLCFLGLAIATAIHDTWWEKRQGQKTKDRSAPVPDLPNAA*
Ga0127485_10820871	3300010091	Grasslands Soil	VVFQVEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVAAAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0127468_10625791	3300010092	Grasslands Soil	NNGRTPVAFQMEVKMLVLALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGEKIKDRPASVPDLPDAA*
Ga0127490_10997561	3300010093	Grasslands Soil	GLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0127475_10346021	3300010095	Grasslands Soil	ANNGRTPVVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGEKIKDRPASVPDLPDAA*
Ga0127501_10340781	3300010097	Grasslands Soil	NNGRTPVVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTTDRPAPVPDVPDAA*
Ga0127501_10872631	3300010097	Grasslands Soil	GRTSVVFQMEVKMLVPALSPFGLPEGPSAVLDLTATFAPFFFSMAFVLGLCILGLAVATAIHDTWWETRQGQKTQDRPAPVPDVPDAA*
Ga0127450_11283241	3300010099	Grasslands Soil	VLYRSAKGRTNNGRTPVVFQVEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVPDAA*
Ga0127440_10190041	3300010100	Grasslands Soil	VVFQVEVKMLVPALSPVGLPEGPSAVLDLTTTFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0127453_10367911	3300010102	Grasslands Soil	RSAKVLYRSAKGRTNNGRTPVVFQVEVKMLVSALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTTDRPAPVPDVPNAA*
Ga0127500_10254952	3300010103	Grasslands Soil	LYRSAKGRTNNGRTPVVFQVEVKMLVSALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTTDRPAPVPDVPDAA*
Ga0127494_10050561	3300010107	Grasslands Soil	VLYRSAKGRTNNGRTPVVFQVEVKMLVSALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTTDRPAPVPDVPNAA*
Ga0127494_11165831	3300010107	Grasslands Soil	MLMPVVSLFGLPEGSSAVLDLTADFAPLFFGMVFVLGLCILGLAVATAIHDTWWKNQMDDKTKDHPTPLPDFPDAA*
Ga0127474_10669651	3300010108	Grasslands Soil	INGRTPVVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTTDRPAPVPDVPNAA*
Ga0127497_10214842	3300010109	Grasslands Soil	VVFQVEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVPDAA*
Ga0127491_11205741	3300010111	Grasslands Soil	AKGRANNGRTLVVFQMEVKMLVPTLSPVGLPEGPSAVLDVTATFAPLFFGLVFALGLCVLGLAIATAIHDTWWEKRQGQKTTDRPAPVPDVPNAA*
Ga0127491_11369382	3300010111	Grasslands Soil	VVFQMEVKMLVLALSPVGLPERPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0127458_10926432	3300010112	Grasslands Soil	RANNGRTPVVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFSMAVALGLCILGLAVATAIHDTWWEKRQGQKTTDRPAPVPDVPNAA*
Ga0127466_11263741	3300010116	Grasslands Soil	VVFQVEVKMLVPALSPVGLPEGPSAVLDLTADFAPLFFGLVFTLGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDWPDAA*
Ga0127465_11400262	3300010118	Grasslands Soil	MEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFSMAVALGLCILGLAVATAIHDTWWEKRQGKKTTDRRAPVPDVSDAA*
Ga0127451_10608732	3300010120	Grasslands Soil	MLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0127488_10325761	3300010122	Grasslands Soil	LSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVAAAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0127488_10851861	3300010122	Grasslands Soil	VLYRSAKGRTNNGRTPVVFQVEVKMLVPALSPVGLPEGPSAVLDLTTTFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTT
Ga0127443_10318941	3300010125	Grasslands Soil	VVFQVEVKMLVPALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDWPDAA*
Ga0127482_11618661	3300010126	Grasslands Soil	VLYRSAKGRTNNGRTPVVFQVEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFSMAVALGLCILGLAVATAIHDTWWEKRQGKKTTDRRAPVPDVPDAA*
Ga0127486_10683492	3300010128	Grasslands Soil	EVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDWPDAA*
Ga0127493_10099031	3300010130	Grasslands Soil	VLYRSAKGRANNGRTPVVFQMEVKMLVPALSLFGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0127447_10282341	3300010136	Grasslands Soil	VVFQVEVKMLVPALSPVGLPEGPSAVLDLTTTFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGKKTTDRRAPVPDVSDAA*
Ga0127483_12661032	3300010142	Grasslands Soil	VVFQVEVKMLVSALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0134070_103059712	3300010301	Grasslands Soil	LYRSAKGRTNNGRILVVFQVEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0134088_103601621	3300010304	Grasslands Soil	MEVKMLVPALSPFGLPAGPSAVLDLTATFAPFFFSMAFVLGLCILGLAVATAIHDTWWETRQGQKTQDRPA
Ga0134086_101609571	3300010323	Grasslands Soil	VLYRSAKGRTNNGRTPVVFQVEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVAAAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0134111_100285234	3300010329	Grasslands Soil	VLYRSAKGRTNNGRILVVFQVEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0134080_106976441	3300010333	Grasslands Soil	VLYRSAKGRTNNGRTPVVFQVEVKMLVSALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0134071_104425012	3300010336	Grasslands Soil	PVVFQMEVKMLVLALSLFGLPEGPSAVLDLTADFAPLFFGLVLALGLCILGLAVATAIHDTWWETRKGKKTTDRRAPVPDVPDAA*
Ga0138113_1435182	3300010895	Grasslands Soil	GLPEGPSAVLDLTATFAPLFFSMAVALGLCILGLAVATAIHDTWWEKRQGKKTTDRRAPVPDVPDAA*
Ga0138112_10307601	3300010905	Grasslands Soil	MLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVAAAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0138112_10733111	3300010905	Grasslands Soil	VVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFSMAVALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDWPDAA*
Ga0137383_103027663	3300012199	Vadose Zone Soil	MLVPALSPVGLPEGPSAVLDVTATFAPLFFGLVFALGLCVLGLAIATAIHDTWWEKRQGQKTKDRSAPVPDLPNAA*
Ga0137380_100177507	3300012206	Vadose Zone Soil	VLYRSAKGRTNNGRTPVVFQVEVKMLVSALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKT
Ga0137380_100430325	3300012206	Vadose Zone Soil	MEVKMLVPTLSPVGLPEGPSAVLDVTATFAPLFFGLVFALGLCVLGLALAPAIHDPWWEKRQGQKTKDRSAPVPDLPNAA*
Ga0137381_100478625	3300012207	Vadose Zone Soil	MEVKMLVPTLSPVGLPEGPSAVLDVTATFAPLFFGLVFALGLCVLGLAIATAIHDTWWEKRQGQKTKDRSAPVPDLPNAA*
Ga0137379_104037841	3300012209	Vadose Zone Soil	VLYRSAKGRTNNGRTPVVFQVEVKMLVSALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTTDRPAPVPDVPDAA*
Ga0137378_111922762	3300012210	Vadose Zone Soil	QMEVKMLVPTLSPVGLPEGPSAVLDVTATFAPLFFGLVFALGLCVLGLAIATAIHDTWWEKRQGQKTTDRPAPVPDVPDAA*
Ga0137386_100507055	3300012351	Vadose Zone Soil	MEVKMLVPTLSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTKDRSAPVPDLPNAA*
Ga0137369_106335161	3300012355	Vadose Zone Soil	VVFQVEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVVALGLCILGLAVATAIHDTWWEPRKGKKTPDRRAPVPDVSAAA*
Ga0137369_107097771	3300012355	Vadose Zone Soil	MEVKMLVPALSPFGLPEGSAAVLDLTADLAPLFFGLVFVLGLCILGLAVATAIHDTWWENRQGKKTKDHP
Ga0137385_104672833	3300012359	Vadose Zone Soil	LSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTKDRSAPVPDVPDAA*
Ga0134037_10554911	3300012372	Grasslands Soil	RSAKVLYRSAKGRTNNGRTPVVFQVEVKMLVSALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTTDRPAPVPDVPDAA*
Ga0134042_11019262	3300012373	Grasslands Soil	VVFQVEVKMLVSALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTTDRPAPVPDVPNAA*
Ga0134032_11108302	3300012376	Grasslands Soil	MEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDWPDAA*
Ga0134025_11427581	3300012378	Grasslands Soil	ALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGEKIKDRPASVPDLPDAA*
Ga0134026_11701141	3300012381	Grasslands Soil	MEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGPVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0134026_11801772	3300012381	Grasslands Soil	NGRTPVVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVPDAA*
Ga0134038_11776762	3300012382	Grasslands Soil	VLYRSAKGRTNNGRTPVVFQVEVKMLVSALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPV
Ga0134036_10097081	3300012384	Grasslands Soil	GRANNGRTPVVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0134046_10049221	3300012386	Grasslands Soil	NGRTPVVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDWPDAA*
Ga0134031_11782811	3300012388	Grasslands Soil	VVFQVEVKMLVPALSPVGLPEGPSAVLDLTTTFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTT
Ga0134031_12382011	3300012388	Grasslands Soil	ANNGRTPVAFQMEVKMLVLALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGEKTKDRPASVPDLPDAA*
Ga0134054_11610301	3300012390	Grasslands Soil	RTPVVFQMEVKMLVLALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTKDRSAPVPDVPDAA*
Ga0134035_10710302	3300012391	Grasslands Soil	KMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0134052_11605681	3300012393	Grasslands Soil	TFQRSTRSAKVLYRSAKGRANNGRTPVVFQMEVKMLVPALSLFGLPEGPSAVLDLTADFAPLFFGLVLALGLCILGLAVATAIHDTWWETRKGKKTTDRRPPVPDVPDAA*
Ga0134057_10170901	3300012396	Grasslands Soil	VLYRSAKGRTNNGRTPVVFQVEVKMLVSALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTKDRSAPVPDLPNAA*
Ga0134056_10506161	3300012397	Grasslands Soil	AKGRANNGRTLVVFQMEVKMLVPTLSPVGLPEGPSAVLDVTATFAPLFFGLVFALGLCVLGLAIATAIHDTWWENRQGQKTKDRSAPVPDLPNAA*
Ga0134051_11027641	3300012398	Grasslands Soil	RSTRSAKVLYRSAKGRTNNGRTPVVFQVEVKMLVSALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTTDRPAPVPDVPDAA*
Ga0134048_13064201	3300012400	Grasslands Soil	NNGRTPVVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDWPDAA*
Ga0134053_11178622	3300012406	Grasslands Soil	ANNGRTPVVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFSMAVALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0134050_12981422	3300012407	Grasslands Soil	ANNGRTPVVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDWPDAA*
Ga0134045_12994641	3300012409	Grasslands Soil	KGRANNGRTPVVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDWPDAA*
Ga0137404_120992731	3300012929	Vadose Zone Soil	VVFQVEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETQQGKKTPDRRAPVPDVS
Ga0134077_103877381	3300012972	Grasslands Soil	MEVKMLVPALSPFGLPAGPSAVLDLTATFAPLFFGLVFALGLCVLGLAIATAIHDTWWETRQGQKTKDRPAPVPDLPDAA*
Ga0134110_100927761	3300012975	Grasslands Soil	VLYRSAKGRTINGRTPVVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0134076_104242591	3300012976	Grasslands Soil	MEVKMLVPALSPFGLPAGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWEKRQGQKTTDRPAPVPDVPDAA*
Ga0134079_102460642	3300014166	Grasslands Soil	MEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFSMAVALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPEVSDAA*
Ga0134089_100893232	3300015358	Grasslands Soil	VLYRSAKGRTNNGRTPVVFQVEVKMLVSALSPVGLPEGPSAVLDLTADFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA*
Ga0134112_103970572	3300017656	Grasslands Soil	VVSQMEVKMLVPALSPFGLPAGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGQKTKDRPAPVPDLPDAA
Ga0134074_13860451	3300017657	Grasslands Soil	VVFQVEVKMLVSALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVPDAA
Ga0066655_103998141	3300018431	Grasslands Soil	VVFQVEVKMLVPALSPVGLPEGPSAVLDLTTTFAPLFYGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDWPDAA
Ga0066667_110773641	3300018433	Grasslands Soil	VVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVPDVSDAA
Ga0066669_106734052	3300018482	Grasslands Soil	VVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFGLVFALGLCILGLAVATAIHDTWWETRQGKKTTDRRAPVP
Ga0184643_13912191	3300019255	Groundwater Sediment	VVFQVEVKMLMPALSPGGLPDGPSAVLDLTATFAPLFFGLVITLGLCILGLAVATAIHDTWWEPRKGKQTPDRRAPVPDVSDAA
Ga0184646_10600571	3300019259	Groundwater Sediment	VVFQVEVKMLMPALSSVGLPDGPSAVLDLTAAFAPLFFGLVVALGLSILGLAVATAIHDTWWETRKGKKTPDRRAPVPDVSDAA
Ga0187892_102552052	3300019458	Bio-Ooze	MLLSALSLFGLPEGPSAVLDLTVDFAPLFFGMMFALGLCILGLVVATAIHDTWWENWQVKKKKLADRSAPVPDIPDAA
Ga0179585_11819391	3300021307	Vadose Zone Soil	GRANNGRTPVVFQMEVKMLVPALSPVGLPEGPSAVLDLTATFAPLFFSMAVALGLCILGLAVATAIHDTWWEKRQGKKTTDRRAPVPDVSDAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082084

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences