Metagenome Family F082068

Basic Information
Family ID	F082068
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	41 residues
Representative Sequence	VVGHVHRVVSADGKTLTVHNKGAKLSGATGDETLVFDKQ
Number of Associated Samples	99
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.36 %
% of genes near scaffold ends (potentially truncated)	90.27 %
% of genes from short scaffolds (< 2000 bps)	85.84 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Most Common Taxonomy
Group	Bacteria (78.761 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.699 % of family members)
Environment Ontology (ENVO)	Unclassified (22.124 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.327 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 37.31% Coil/Unstructured: 62.69%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13676	TIR_2	6.19
PF14534	DUF4440	4.42
PF00589	Phage_integrase	3.54
PF02894	GFO_IDH_MocA_C	1.77
PF13577	SnoaL_4	1.77
PF08734	GYD	1.77
PF08269	dCache_2	1.77
PF07883	Cupin_2	1.77
PF01553	Acyltransferase	1.77
PF00107	ADH_zinc_N	1.77
PF00106	adh_short	1.77
PF01435	Peptidase_M48	0.88
PF00083	Sugar_tr	0.88
PF05199	GMC_oxred_C	0.88
PF08327	AHSA1	0.88
PF02743	dCache_1	0.88
PF07969	Amidohydro_3	0.88
PF04828	GFA	0.88
PF02321	OEP	0.88
PF07719	TPR_2	0.88
PF13520	AA_permease_2	0.88
PF13531	SBP_bac_11	0.88
PF09851	SHOCT	0.88
PF12697	Abhydrolase_6	0.88
PF08240	ADH_N	0.88
PF09351	DUF1993	0.88
PF13302	Acetyltransf_3	0.88
PF06296	RelE	0.88
PF10014	2OG-Fe_Oxy_2	0.88
PF00578	AhpC-TSA	0.88
PF00440	TetR_N	0.88
PF02922	CBM_48	0.88
PF07221	GlcNAc_2-epim	0.88
PF01979	Amidohydro_1	0.88
PF00581	Rhodanese	0.88
PF17164	DUF5122	0.88
PF05368	NmrA	0.88
PF03091	CutA1	0.88
PF07235	DUF1427	0.88
PF01557	FAA_hydrolase	0.88
PF03976	PPK2	0.88
PF00072	Response_reg	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0673	Predicted dehydrogenase	General function prediction only [R]	1.77
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.77
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.77
COG1324	Divalent cation tolerance protein CutA	Inorganic ion transport and metabolism [P]	0.88
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.88
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.88
COG2942	Mannose or cellobiose epimerase, N-acyl-D-glucosamine 2-epimerase family	Carbohydrate transport and metabolism [G]	0.88
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.88
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.88
COG4317	Xanthosine utilization system component, XapX domain	Nucleotide transport and metabolism [F]	0.88
COG4737	Uncharacterized conserved protein	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.76 %
Unclassified	root	N/A	21.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.76 %
Unclassified	root	N/A	21.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.76 %
Unclassified	root	N/A	21.24 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.36 %
Unclassified	root	N/A	21.24 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.54 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.65 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	28.32 %
Unclassified	root	N/A	21.24 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.24 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	18.58 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.65 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.77 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.88 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.88 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.24 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	18.58 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.77 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.77 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.88 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.88 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.88 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.88 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.24 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	18.58 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1.77 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.77 %
unclassified Candidatus Accumulibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter	0.88 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.88 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.88 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.88 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.24 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	18.58 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	1.77 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.77 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.88 %
Candidatus Accumulibacter sp. SK-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp. SK-11	0.88 %
Opitutus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus	0.88 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.88 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.24 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	18.58 %
Sphingomonas sp. URHD0057	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	1.77 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.77 %
unclassified Opitutus	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus	0.88 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.88 %
Candidatus Accumulibacter sp. SK-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp. SK-11	0.88 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.88 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.24 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	18.58 %
Sphingomonas sp. URHD0057	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	1.77 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.77 %
Opitutus sp. GAS368	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus → Opitutus sp. GAS368	0.88 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.88 %
Candidatus Accumulibacter sp. SK-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp. SK-11	0.88 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.88 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_101108176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	607	Open in IMG/M
3300001175\|JGI12649J13570_1016768	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300002909\|JGI25388J43891_1016471	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300004080\|Ga0062385_10893984	Not Available	589	Open in IMG/M
3300005335\|Ga0070666_10477393	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300005438\|Ga0070701_11191005	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005554\|Ga0066661_10111679	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300005568\|Ga0066703_10457755	Not Available	763	Open in IMG/M
3300005591\|Ga0070761_10503729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	747	Open in IMG/M
3300005764\|Ga0066903_102025910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1106	Open in IMG/M
3300005764\|Ga0066903_106070950	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300005843\|Ga0068860_100073880	All Organisms → cellular organisms → Bacteria	3241	Open in IMG/M
3300006032\|Ga0066696_10367196	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300006046\|Ga0066652_100005706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	7399	Open in IMG/M
3300009137\|Ga0066709_102374899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	722	Open in IMG/M
3300009177\|Ga0105248_13291445	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300009628\|Ga0116125_1066676	Not Available	932	Open in IMG/M
3300010046\|Ga0126384_10512827	All Organisms → cellular organisms → Bacteria → Proteobacteria	1035	Open in IMG/M
3300010361\|Ga0126378_11564114	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300010362\|Ga0126377_12094883	Not Available	642	Open in IMG/M
3300010362\|Ga0126377_12643666	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300010376\|Ga0126381_101302670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1050	Open in IMG/M
3300010379\|Ga0136449_102857351	All Organisms → cellular organisms → Bacteria → Proteobacteria	680	Open in IMG/M
3300010396\|Ga0134126_11345825	Not Available	790	Open in IMG/M
3300012137\|Ga0137346_1059774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	525	Open in IMG/M
3300012198\|Ga0137364_10003205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8399	Open in IMG/M
3300012362\|Ga0137361_10695492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	929	Open in IMG/M
3300012362\|Ga0137361_10743535	All Organisms → cellular organisms → Bacteria → Proteobacteria	894	Open in IMG/M
3300012362\|Ga0137361_11750920	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300012917\|Ga0137395_11254143	Not Available	515	Open in IMG/M
3300012925\|Ga0137419_10340691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1157	Open in IMG/M
3300012927\|Ga0137416_11027465	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	737	Open in IMG/M
3300012944\|Ga0137410_10100088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp. SK-11	2148	Open in IMG/M
3300012977\|Ga0134087_10007419	All Organisms → cellular organisms → Bacteria	3649	Open in IMG/M
3300014165\|Ga0181523_10114997	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300014165\|Ga0181523_10481821	Not Available	686	Open in IMG/M
3300014169\|Ga0181531_10120954	Not Available	1573	Open in IMG/M
3300014489\|Ga0182018_10193992	All Organisms → cellular organisms → Bacteria → Acidobacteria	1139	Open in IMG/M
3300014838\|Ga0182030_11392128	Not Available	585	Open in IMG/M
3300015052\|Ga0137411_1339686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2824	Open in IMG/M
3300015053\|Ga0137405_1044919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	581	Open in IMG/M
3300015053\|Ga0137405_1114772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	680	Open in IMG/M
3300015053\|Ga0137405_1200312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	802	Open in IMG/M
3300015053\|Ga0137405_1243636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	894	Open in IMG/M
3300015080\|Ga0167639_1029288	Not Available	755	Open in IMG/M
3300015197\|Ga0167638_1085443	Not Available	625	Open in IMG/M
3300015373\|Ga0132257_101669307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	816	Open in IMG/M
3300016319\|Ga0182033_11002797	All Organisms → cellular organisms → Bacteria → Proteobacteria	743	Open in IMG/M
3300016371\|Ga0182034_11522111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	586	Open in IMG/M
3300017959\|Ga0187779_10310310	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300017966\|Ga0187776_10699154	Not Available	717	Open in IMG/M
3300018037\|Ga0187883_10494740	Not Available	630	Open in IMG/M
3300018042\|Ga0187871_10740639	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300018062\|Ga0187784_10709360	Not Available	805	Open in IMG/M
3300018433\|Ga0066667_11114396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	683	Open in IMG/M
3300019786\|Ga0182025_1020256	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300019786\|Ga0182025_1285387	All Organisms → cellular organisms → Bacteria → Proteobacteria	2154	Open in IMG/M
3300021086\|Ga0179596_10674697	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300021178\|Ga0210408_10039310	All Organisms → cellular organisms → Bacteria	3720	Open in IMG/M
3300021178\|Ga0210408_10204380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1571	Open in IMG/M
3300021181\|Ga0210388_11433419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	579	Open in IMG/M
3300021384\|Ga0213876_10607839	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300021401\|Ga0210393_11421591	Not Available	554	Open in IMG/M
3300021402\|Ga0210385_10396292	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300021402\|Ga0210385_10883719	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus → Opitutus sp. GAS368	686	Open in IMG/M
3300021420\|Ga0210394_10875552	All Organisms → cellular organisms → Bacteria → Proteobacteria	782	Open in IMG/M
3300021433\|Ga0210391_10716074	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	784	Open in IMG/M
3300021433\|Ga0210391_11231583	Not Available	579	Open in IMG/M
3300021478\|Ga0210402_10088532	All Organisms → cellular organisms → Bacteria → Acidobacteria	2766	Open in IMG/M
3300021479\|Ga0210410_10010015	All Organisms → cellular organisms → Bacteria → Proteobacteria	8182	Open in IMG/M
3300022521\|Ga0224541_1017062	Not Available	781	Open in IMG/M
3300022881\|Ga0224545_1022171	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300024330\|Ga0137417_1369228	Not Available	2489	Open in IMG/M
3300025915\|Ga0207693_10328421	Not Available	1197	Open in IMG/M
3300025941\|Ga0207711_10111891	All Organisms → cellular organisms → Bacteria	2429	Open in IMG/M
3300025961\|Ga0207712_12145849	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300026300\|Ga0209027_1226075	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300026317\|Ga0209154_1015702	All Organisms → cellular organisms → Bacteria → Proteobacteria	3602	Open in IMG/M
3300027853\|Ga0209274_10346786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	765	Open in IMG/M
3300028047\|Ga0209526_10313835	Not Available	1058	Open in IMG/M
3300028047\|Ga0209526_10418688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300028742\|Ga0302220_10173098	Not Available	814	Open in IMG/M
3300028773\|Ga0302234_10242071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	777	Open in IMG/M
3300028773\|Ga0302234_10346466	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300028780\|Ga0302225_10135802	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300028801\|Ga0302226_10096962	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300028877\|Ga0302235_10424155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	568	Open in IMG/M
3300028879\|Ga0302229_10019759	All Organisms → cellular organisms → Bacteria → Proteobacteria	3764	Open in IMG/M
3300030013\|Ga0302178_10398739	Not Available	614	Open in IMG/M
3300030056\|Ga0302181_10001764	All Organisms → cellular organisms → Bacteria	15820	Open in IMG/M
3300030057\|Ga0302176_10039577	All Organisms → cellular organisms → Bacteria → Proteobacteria	1799	Open in IMG/M
3300030509\|Ga0302183_10144769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	933	Open in IMG/M
3300030737\|Ga0302310_10085734	Not Available	1974	Open in IMG/M
3300031231\|Ga0170824_117543771	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300031236\|Ga0302324_102065769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	712	Open in IMG/M
3300031573\|Ga0310915_10371792	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300031640\|Ga0318555_10606312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	593	Open in IMG/M
3300031708\|Ga0310686_114903567	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	576	Open in IMG/M
3300031715\|Ga0307476_11293139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	532	Open in IMG/M
3300031754\|Ga0307475_10982072	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300031770\|Ga0318521_10779998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	582	Open in IMG/M
3300031788\|Ga0302319_11181265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	709	Open in IMG/M
3300031820\|Ga0307473_11299011	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300031823\|Ga0307478_10452704	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300031833\|Ga0310917_10318301	All Organisms → cellular organisms → Bacteria → Proteobacteria	1054	Open in IMG/M
3300031835\|Ga0318517_10414037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	609	Open in IMG/M
3300031941\|Ga0310912_10758942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	750	Open in IMG/M
3300031954\|Ga0306926_11115355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	932	Open in IMG/M
3300032001\|Ga0306922_11281636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	742	Open in IMG/M
3300032009\|Ga0318563_10760995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	519	Open in IMG/M
3300032043\|Ga0318556_10588931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	580	Open in IMG/M
3300032064\|Ga0318510_10323268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	646	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.81%
Host-Associated	Host-Associated	6.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.73%
Aquatic	Environmental → Aquatic	7.08%
Plants	Host-Associated → Plants	6.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.57%
Peat	Environmental → Terrestrial → Peat	14.16%
Freshwater	Environmental → Aquatic → Freshwater	6.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.77%
Sediment	Environmental → Aquatic → Sediment	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.16%
Loam	Environmental → Terrestrial → Soil → Loam	8.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.31%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.16%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	11.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.77%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.89%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012137	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT560_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015080	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082068

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1011081761	3300000559	Soil	KAVGHVHRVVSADGKTLTVKNSGAKLSGAKGDETLVYDKQ*
JGI12649J13570_10167681	3300001175	Forest Soil	VGTVHRVVSKDGKTLTVHNKGTHSDGKPYDDTLVFDKQ*
JGI25388J43891_10164711	3300002909	Grasslands Soil	KVVGSVHRVLSADGKTLTVSNKGTHADGKAYHDTLVFDKQ*
Ga0062385_108939842	3300004080	Bog Forest Soil	TSDFALSKGGKAVGTVHRVVSADGKTLTVHNQGTHADGTPYDDTLVFDKQ*
Ga0070666_104773931	3300005335	Switchgrass Rhizosphere	GKEVGRVHRTVSADGKVLTVHNTGRQPSGAVGNDTLVFDKK*
Ga0070701_111910052	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	IDNNTSHFIMKRDGKEVGTVHRVLSKDGNTLTVENKGTHPDGKAYDDTLVFDKQK*
Ga0066661_101116792	3300005554	Soil	TVHRVVSTDGKTLTVNNKGTHSDGKPYDDTLVFDKQ*
Ga0066703_104577552	3300005568	Soil	KKDGKVVGHVHRIVSADGKTLTVHNTGVQRSGATGDETLVFHKQ*
Ga0070761_105037292	3300005591	Soil	VHRVVSAGGKTLTVHNTGVQVNGAMGDETLVFDKQ*
Ga0066903_1020259104	3300005764	Tropical Forest Soil	KDGKVVGHVHRVVSADGKTLTVHNTGMMVSGVKGDQTLVYDKQ*
Ga0066903_1060709503	3300005764	Tropical Forest Soil	KDGKVVGHVHRVVSADGKTLTVHNTGMMVSGVKGDQTLVFDKQ*
Ga0068860_1000738803	3300005843	Switchgrass Rhizosphere	KEVGTVHRVLSADGKTLTVENKGTHMDGKAYDDKLVFDRQK*
Ga0066696_103671961	3300006032	Soil	LKKDGKVVGHVHRVVSADGRTLTVHNTGLQLTSAGGDQTLVFDRQ*
Ga0066652_10000570610	3300006046	Soil	VHRVVSADGKTLTVHNTGVQRSGATGDETLVFHKQ*
Ga0066709_1023748992	3300009137	Grasslands Soil	VGHVHRVVSADGRTLTVHNTGLQLTSAGGDQTLVFDRQ*
Ga0105248_132914452	3300009177	Switchgrass Rhizosphere	GGKEVGHVHGTVSADGKVPTVLNTGRQPSGATGNDSLVFDKK*
Ga0116125_10666763	3300009628	Peatland	GGKVVGRVHRVVSEDGKTLTVHNKGTRPDGTTYDDTLVFDKQ*
Ga0126384_105128271	3300010046	Tropical Forest Soil	VHRVVSGDGKTLTVHNTGTHTDGKAYDDTLVFDKQ*
Ga0126378_115641141	3300010361	Tropical Forest Soil	MDGKVVGHVHRVVSADGKVLTVHNTGSQGNNAASDDTMVFDKQ*
Ga0126377_120948831	3300010362	Tropical Forest Soil	DKGKVVGHVHRVVSADGKTLTVHNTGAKMSGAKGDETLVYDKQ*
Ga0126377_126436662	3300010362	Tropical Forest Soil	VHRVVSADGKTLTVHNTGMMISGVKGDQTLVYDRQ*
Ga0126381_1013026701	3300010376	Tropical Forest Soil	DLKKDGKVVGHVHRVVSPDGKTLTVHNTGTLLSGRTGDETLVFDKQ*
Ga0136449_1028573511	3300010379	Peatlands Soil	GTVHRVVSADGNTLTVNNKGTNPNGKTYNDTLVFDKQ*
Ga0134126_113458252	3300010396	Terrestrial Soil	VTGHVHRVASADGKVLTVHNAGRQADAPSAADTMVFDKQ*
Ga0137346_10597742	3300012137	Soil	MRDGKKVGHVHRVVSADGKTLTVQNSGAKLSGAAGDETLVYDKQ*
Ga0137364_100032059	3300012198	Vadose Zone Soil	GHVHRVVSADGRTLTVHNTGLQLTSAGGDQTLVFDRQ*
Ga0137399_101976403	3300012203	Vadose Zone Soil	ANTWDFDLKKDGKVVGHVHRVVSADGKTLTVHNTGALRGGATGDETLVFDKQ*
Ga0137361_106954921	3300012362	Vadose Zone Soil	KVVGHVHRVVSADGKTLTVHNTGVQLSGAKGDETLVFDSQ*
Ga0137361_107435353	3300012362	Vadose Zone Soil	VGHVHRVVSADGKTLTVHNTGAKLSGAQGDQTLVFDKQ*
Ga0137361_117509201	3300012362	Vadose Zone Soil	KKAGKVVGHVHRVVSADGKTLTVHNTGAKLSGAEGDETLVFDKQ*
Ga0137395_112541431	3300012917	Vadose Zone Soil	GTVHRVVSTDGKTLTVNNKGTHSDGRPYDDTLVFDKQ*
Ga0137419_103406911	3300012925	Vadose Zone Soil	NTWDFDLKKDGKVVGHVHRVVSADGKTLTVHNTGVQLSGAKGDETLVFDSQ*
Ga0137416_110274652	3300012927	Vadose Zone Soil	VGSVHRVVSADGKTLTVNNKGTHADGKAYDDTLVFDKQ*
Ga0137410_101000882	3300012944	Vadose Zone Soil	VGTVHRVVSADGKTLTVNNKGTHNDGVAYDDTLVFTRQ*
Ga0134087_100074195	3300012977	Grasslands Soil	GKVVGHVHRVVSADGRTLTVHNTGLQLTGAGGDQTLVFDRQ*
Ga0181523_101149973	3300014165	Bog	HRVVSADGKTLTVNNKGTRPDGKTYDDTLVFDKQ*
Ga0181523_104818212	3300014165	Bog	VHRVVSADGKTLTVNNKGTRPDGKTYDDTLVFDKQ*
Ga0181531_101209541	3300014169	Bog	KEVGHAHRTVSADGKTLTVHNTGKQITGATGDDTLVFDKK*
Ga0182018_101939922	3300014489	Palsa	GKVVGHVHRVVSADGKTLTVQNTGVQLSGATGDETLVFDKQ*
Ga0182030_113921281	3300014838	Bog	DFTLKMGGKVVGSVHRVVSADGKVLTVKNKGTHPDGKTYDDTLVFDKQ*
Ga0137411_13396861	3300015052	Vadose Zone Soil	LDFDLKKDGKVVGHVHRVVSADGKTLTVHNTGALRGGATGDETLVFDKQ*
Ga0137405_10449191	3300015053	Vadose Zone Soil	APRRIVVSADGKTLTVNNKGTHSDGKPYDDTLVFDKQ*
Ga0137405_11147721	3300015053	Vadose Zone Soil	HRVVSVVSADGKTLTVNNKGTHSDGKPYDDTLVFDKQ*
Ga0137405_12003121	3300015053	Vadose Zone Soil	ALCTAFVSADGKTLTVNNKGTHSDGKPYDDTLVFDKQ*
Ga0137405_12436361	3300015053	Vadose Zone Soil	GTVHRVVSADGKTLTVNNKGTHSDGKPYDDTLVFDKQ*
Ga0167639_10292881	3300015080	Glacier Forefield Soil	GHVHRVVSAEGKTTTVHNTGMQLGGAMGDETLVFDKQ*
Ga0167638_10854431	3300015197	Glacier Forefield Soil	VHRVVSAEGKTTTVHNTGMQLGGAMGDETLVFDKQ*
Ga0132257_1016693073	3300015373	Arabidopsis Rhizosphere	GHVHRVVSADGKTLTVHNTGMMLSGMKGDQTLVFDKQ*
Ga0182033_110027973	3300016319	Soil	LKQGGKVVGHVHRVVSADGKTLTVHNQGMQLSGVTGEETLVYDKQ
Ga0182034_115221111	3300016371	Soil	LKKDGKVVGHVHRVVSADGKTLTVHNKGAKLSGATGDEMLVFDKQ
Ga0187779_103103101	3300017959	Tropical Peatland	VGRVQRTVSADGKTLTVHNTGKQLSGATGDDTLVFDKK
Ga0187776_106991542	3300017966	Tropical Peatland	GHVSRVVSADGKTLTVHNTGTQVNGATGEERLVFDKQ
Ga0187883_104947401	3300018037	Peatland	SDFALTKDGKAVGTVHRVVSANGKTLTVHNKGTHADGTSYDDTLVFDKQ
Ga0187871_107406391	3300018042	Peatland	GKVVGRVHRVVSEDGKTLTVHNKGTRPDGTTYDDTLVFDKQ
Ga0187784_107093602	3300018062	Tropical Peatland	VYTDRRVVSKDGKSLTITRTGTDSQGKPYHETLVFDKQ
Ga0066667_111143961	3300018433	Grasslands Soil	KVVGHVHRVVSADGRTLTVHNTGLQLTSAGGDQTLVFDRQ
Ga0182025_10202561	3300019786	Permafrost	VVSADAADGKTLTVHNTGTQLSGVMGDETLVFDKQ
Ga0182025_12853874	3300019786	Permafrost	VHRVVSADGKTLSVHNKGTHADGTSYDDTLVFDKQ
Ga0179596_106746972	3300021086	Vadose Zone Soil	KVVGTVHRVVSADGKTLTVNNKGTHNDGVAYDDTLVFTRQ
Ga0210408_100393101	3300021178	Soil	VGTVHRVVSADGKTLTVNNKGTHPDGKSYDDTLVFDRQ
Ga0210408_102043801	3300021178	Soil	HVHRVVSADGKTLTVHNTGVQLSGAKGDATLVFDKQ
Ga0210388_114334191	3300021181	Soil	KDGKVVGNVHRVVSPDGKTLTVHNTGLQLNGATGDETLVFDRQ
Ga0213876_106078391	3300021384	Plant Roots	GKAVGHVHRTVSTDGKTLTVHNTGKQPNGSTGDDTLVFDRK
Ga0210393_114215911	3300021401	Soil	TKAGKVVGTVHRVVSLDGKTLTVKNRGTHSDGAAYDDALVFTRQ
Ga0210385_103962921	3300021402	Soil	KVVGHVHRVLSADGKSLTVHNTGVQLSGATGDETLVFDKQ
Ga0210385_108837191	3300021402	Soil	LKKDGKVVGRVHRVVSADGKTLTVHNTGTLVGYVAGDETLVYDKQ
Ga0210394_108755521	3300021420	Soil	LKKDGKVVGSVHRVVSADGKTLTVNNKGTHADGKKYDDTLVFEKQ
Ga0210391_107160742	3300021433	Soil	NARTSDFTLTKGGKTTGTVHRVVSTDGKTLTVHNKGRHADGTPYDDKLVFDKQ
Ga0210391_112315832	3300021433	Soil	KSGGKEVGHVHRTVSADGKTLTVHNTGKQPSGATADDTVVFDKE
Ga0210402_100885324	3300021478	Soil	VHRVVSADGKTLTVNNTGMQLSGITGNETLVFDKQ
Ga0210410_100100158	3300021479	Soil	VVGSVHRVVSADGKTLTVNNKGTHADGKTYDDTLVFDKQ
Ga0224541_10170621	3300022521	Soil	SLKSGGKEVGHAHRTVSADGKTLTVHNTGKQITGATGDDTLAFDKK
Ga0224545_10221711	3300022881	Soil	FDLKKDGKVVGHVHRVVSADGKKLTVHNTGTQLSGVMGDETLVFDKQ
Ga0137417_13692283	3300024330	Vadose Zone Soil	VHRVVSADGKTLTVNNKGTHNDGVGYDDTLVFTRQ
Ga0207693_103284212	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MQLGKVVGHVHRVVSADGKTLTVHNSGMMVGGATGDQTLVFTKQ
Ga0207711_101118913	3300025941	Switchgrass Rhizosphere	EVGTVHRVLSADGKTLTVENKGTHMDGKAYDDKLVFDRQK
Ga0207712_121458491	3300025961	Switchgrass Rhizosphere	GRVHRTVSADGKVLTVHNTGRQPSGAVGNDTLVFDKK
Ga0209027_12260751	3300026300	Grasslands Soil	AGKVVGHVHRVVSADGKTLTVHNTGAKLSGAEGDETLVFDRQ
Ga0209154_10157025	3300026317	Soil	TIKKGGKVVGSVHRVLSADGKTLTVSNKGTHADGKAYHDTLVFDKQ
Ga0209274_103467861	3300027853	Soil	VHRVVSAGGKTLTVHNTGVQVNGAMGDETLVFDKQ
Ga0209526_103138351	3300028047	Forest Soil	DFDLKKDGKVVGHVHRVVSADGKTLTVHNTGALRGGATGDETLVFDKQ
Ga0209526_104186882	3300028047	Forest Soil	WEFDLKKGGKVVGHVNRVVSADGKTLTVHSTGMHLSGGTGDETLVFDRQ
Ga0302220_101730982	3300028742	Palsa	VVGTVHRVVSKDGKTLTVHNKGTHADGKAFDDTLVFDKQ
Ga0302234_102420712	3300028773	Palsa	FTLKKGGKVTGTVHRVVSADGKTLTVHNTGTHADGKTYDDTLVFDQQ
Ga0302234_103464662	3300028773	Palsa	KTSGTVHRVVSADGKTLTVHNKGTHADGTSYDDTLVFDKQ
Ga0302225_101358022	3300028780	Palsa	VVGTVHRVVSKDGKTLTVHNKGTHADGTSYDDTLVFDKQ
Ga0302226_100969624	3300028801	Palsa	VGTVHRVVSKDGKTLTVHNKGTHADGKAFDDTLVFDKQ
Ga0302235_104241551	3300028877	Palsa	DLKKDGKVVGHVHRVVSADGKTLTVQNTGVQLSGATGDETLVFDKQ
Ga0302229_100197593	3300028879	Palsa	VHRVVSKDGKTLTVHNKGTHADGKAFDDTLVFDKQ
Ga0302178_103987392	3300030013	Palsa	KGGKVTGTVHRVVSADGKTLTVHNTGTHADGKTYDDTLVFDQQ
Ga0302181_1000176424	3300030056	Palsa	KKGGKVTGTVHRVVSADGKTLTVHNTGTHADGKTYDDTLVFDQQ
Ga0302176_100395771	3300030057	Palsa	AHTSDFTLKMGGKVVGSVHRVVSADGKMLTVRNKGTHADGKTYDDTLVLDKQ
Ga0302183_101447693	3300030509	Palsa	WDFDLKKDGKVVGHVHRVVSADGKTLTVQNTGVQLSGATGDETLVFDKQ
Ga0302310_100857343	3300030737	Palsa	TWDFDLKKDGKVVGHVHRVVSADGKTLTVQNTGVQLSGATGDETLVFDKQ
Ga0170824_1175437712	3300031231	Forest Soil	KEVGHVHRTVSADGKVLTVLNTGRQPSGATGNDSLVFDKK
Ga0302324_1020657692	3300031236	Palsa	DFTLKMGGKVVGHVHRVVSADGKTLTVKNKGTHPDGKTYDDTLVFDKQ
Ga0310915_103717923	3300031573	Soil	HVHRVVSADGKTLTVHNTGAKLSGATGDETLVFERQ
Ga0318555_106063121	3300031640	Soil	KRDGKVVGHVHRVVSADGKTLTVHNKGAKLSGATGDEMLVFDKQ
Ga0310686_1149035671	3300031708	Soil	GTVHRVVSADGKTLTVHNKGTHADGTSYDDTLVFDKQ
Ga0307476_112931392	3300031715	Hardwood Forest Soil	TWDFDMKKDGKVVGHVHRVVSADGKTLTVHNTGAQISGLKGDETLVFDKQ
Ga0307475_109820722	3300031754	Hardwood Forest Soil	VGHVHRVVSADGKSMTVLNTGTRLSGATGSDTLVFDRQ
Ga0318521_107799981	3300031770	Soil	VVGHVHRVVSADGKTLTVHNKGAKLSGATGDETLVFDKQ
Ga0302319_111812652	3300031788	Bog	DFTLKRGGTVVGTVHRVVSADGKRLTVKNKGTHADGTAYDDTLVFDKQ
Ga0307473_112990111	3300031820	Hardwood Forest Soil	GHVHRVVSADGKSMTVLNTGTRLSGATGSDTLVFDRQ
Ga0307478_104527041	3300031823	Hardwood Forest Soil	LSKGGKAVGTVHRVVSADGKTLTVHNKGTHADGTPYDDTLVFDKQ
Ga0310917_103183011	3300031833	Soil	KVIGHVHRVVSADGKTLTVHNQGMQLSGVTGEETLVYDKQ
Ga0318517_104140371	3300031835	Soil	DGKVVGHVHRVVSADGKTLTVHNTGMMLSGMKGDQTLVFDKQ
Ga0310912_107589422	3300031941	Soil	TWDFDLKKDGKVVGHVHRVVSADGKTLTVHNTGAKLSGATGDETLVFERQ
Ga0306926_111153553	3300031954	Soil	DGKVIGHVHRVVSADGKTLTVHNTGTMLNGATGDQTLVFDKQ
Ga0306922_112816363	3300032001	Soil	LKKDGKVVGHVHRVVSADGKTLTVHNTGMMLSGVTGDQTLVFDKQ
Ga0318563_107609951	3300032009	Soil	VVGHVHRVVSADGKTLTVHNTGMQLSGATGDETLVFDRQ
Ga0318556_105889311	3300032043	Soil	LKKGDKVVGHVHRVVSADGKTLTVHNSGMMLSGMKGDQTLVFDKQ
Ga0318510_103232683	3300032064	Soil	VGHVHRVVSADGKTLTVHNTGMMLSGMKGDQTLVFDKQ

Hidden Markov Model


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