Metagenome / Metatranscriptome Family F082041

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082041
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	73 residues
Representative Sequence	MVTRPVGTKRETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAVAVGALDWPLVLLTGVGVAIVRHRRA
Number of Associated Samples	80
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.73 %
% of genes near scaffold ends (potentially truncated)	18.58 %
% of genes from short scaffolds (< 2000 bps)	66.37 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.522 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (23.894 % of family members)
Environment Ontology (ENVO)	Unclassified (70.796 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (46.018 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.22% β-sheet: 0.00% Coil/Unstructured: 60.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00403	HMA	4.42
PF08402	TOBE_2	4.42
PF00702	Hydrolase	4.42
PF05532	CsbD	4.42
PF00005	ABC_tran	2.65
PF08013	GatZ_KbaZ-like	1.77
PF02720	DUF222	1.77
PF00480	ROK	0.88
PF06114	Peptidase_M78	0.88
PF13358	DDE_3	0.88
PF13520	AA_permease_2	0.88
PF12762	DDE_Tnp_IS1595	0.88
PF00069	Pkinase	0.88
PF02518	HATPase_c	0.88
PF00487	FA_desaturase	0.88
PF07690	MFS_1	0.88
PF03988	DUF347	0.88
PF00083	Sugar_tr	0.88
PF10604	Polyketide_cyc2	0.88
PF13246	Cation_ATPase	0.88
PF01895	PhoU	0.88
PF08713	DNA_alkylation	0.88
PF00230	MIP	0.88
PF12910	PHD_like	0.88
PF16653	Sacchrp_dh_C	0.88
PF00118	Cpn60_TCP1	0.88
PF00903	Glyoxalase	0.88
PF00571	CBS	0.88
PF00534	Glycos_transf_1	0.88
PF00122	E1-E2_ATPase	0.88
PF02909	TetR_C_1	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	5.31
COG2608	Copper chaperone CopZ	Inorganic ion transport and metabolism [P]	4.42
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	4.42
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.54
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.77
COG4573	Tagatose-1,6-bisphosphate aldolase non-catalytic subunit AgaZ/GatZ	Carbohydrate transport and metabolism [G]	1.77
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.88
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.88
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.88
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.88
COG2216	K+ transport ATPase, ATPase subunit KdpB	Inorganic ion transport and metabolism [P]	0.88
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.88
COG4705	Uncharacterized membrane-anchored protein	Function unknown [S]	0.88
COG4912	3-methyladenine DNA glycosylase AlkD	Replication, recombination and repair [L]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.52 %
Unclassified	root	N/A	42.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.52 %
Unclassified	root	N/A	42.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.52 %
Unclassified	root	N/A	42.48 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.90 %
Unclassified	root	N/A	42.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	46.02 %
Unclassified	root	N/A	42.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	18.58 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1.77 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.88 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.88 %
Jiangellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1.77 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.88 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.88 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	1.77 %
Planotetraspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora	0.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Phytoactinopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Phytoactinopolyspora	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1.77 %
Planotetraspora silvatica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora silvatica	0.88 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.88 %
Phytoactinopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Phytoactinopolyspora	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.48 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1.77 %
Streptomyces sp. ODS25	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ODS25	0.88 %
Planotetraspora silvatica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora silvatica	0.88 %
Phytoactinopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Phytoactinopolyspora	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10048977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	2543	Open in IMG/M
3300005541\|Ga0070733_10475224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	835	Open in IMG/M
3300009518\|Ga0116128_1023995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2059	Open in IMG/M
3300009521\|Ga0116222_1057296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1692	Open in IMG/M
3300009521\|Ga0116222_1160583	Not Available	968	Open in IMG/M
3300009547\|Ga0116136_1055907	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300009547\|Ga0116136_1188182	Not Available	515	Open in IMG/M
3300009548\|Ga0116107_1025353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2266	Open in IMG/M
3300009548\|Ga0116107_1038425	Not Available	1711	Open in IMG/M
3300009548\|Ga0116107_1062832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1214	Open in IMG/M
3300009549\|Ga0116137_1018782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2613	Open in IMG/M
3300009549\|Ga0116137_1064087	Not Available	1150	Open in IMG/M
3300009629\|Ga0116119_1070767	Not Available	886	Open in IMG/M
3300009630\|Ga0116114_1090011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	824	Open in IMG/M
3300009639\|Ga0116122_1152340	Not Available	735	Open in IMG/M
3300009643\|Ga0116110_1081004	Not Available	1122	Open in IMG/M
3300009643\|Ga0116110_1248380	Not Available	570	Open in IMG/M
3300009672\|Ga0116215_1008208	Not Available	5255	Open in IMG/M
3300009698\|Ga0116216_10011429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora silvatica	5607	Open in IMG/M
3300009762\|Ga0116130_1096594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	927	Open in IMG/M
3300009839\|Ga0116223_10271963	Not Available	1017	Open in IMG/M
3300010379\|Ga0136449_100026600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14275	Open in IMG/M
3300010379\|Ga0136449_100498151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2117	Open in IMG/M
3300014151\|Ga0181539_1081961	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300014151\|Ga0181539_1176386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	835	Open in IMG/M
3300014156\|Ga0181518_10159277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1203	Open in IMG/M
3300014158\|Ga0181521_10232313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	985	Open in IMG/M
3300014159\|Ga0181530_10015096	All Organisms → cellular organisms → Bacteria	6301	Open in IMG/M
3300014162\|Ga0181538_10244456	Not Available	991	Open in IMG/M
3300014162\|Ga0181538_10356440	Not Available	785	Open in IMG/M
3300014489\|Ga0182018_10024640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3909	Open in IMG/M
3300014489\|Ga0182018_10040415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2906	Open in IMG/M
3300014490\|Ga0182010_10398069	Not Available	751	Open in IMG/M
3300014491\|Ga0182014_10001180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35281	Open in IMG/M
3300014491\|Ga0182014_10028407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4406	Open in IMG/M
3300014491\|Ga0182014_10092419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1851	Open in IMG/M
3300014492\|Ga0182013_10672688	Not Available	521	Open in IMG/M
3300014494\|Ga0182017_10055477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2638	Open in IMG/M
3300014494\|Ga0182017_10349216	Not Available	920	Open in IMG/M
3300014496\|Ga0182011_10022943	All Organisms → cellular organisms → Bacteria	4529	Open in IMG/M
3300014498\|Ga0182019_10285227	Not Available	1097	Open in IMG/M
3300014501\|Ga0182024_10049649	All Organisms → cellular organisms → Bacteria	6680	Open in IMG/M
3300014501\|Ga0182024_10405852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1761	Open in IMG/M
3300014502\|Ga0182021_10895252	Not Available	1067	Open in IMG/M
3300014502\|Ga0182021_13758875	Not Available	503	Open in IMG/M
3300014638\|Ga0181536_10260991	Not Available	823	Open in IMG/M
3300014839\|Ga0182027_10466281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1387	Open in IMG/M
3300014839\|Ga0182027_11130596	Not Available	792	Open in IMG/M
3300016730\|Ga0181515_1167277	Not Available	539	Open in IMG/M
3300017821\|Ga0187812_1082225	Not Available	1061	Open in IMG/M
3300017821\|Ga0187812_1127281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M
3300017925\|Ga0187856_1011511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5033	Open in IMG/M
3300017925\|Ga0187856_1021195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3311	Open in IMG/M
3300017925\|Ga0187856_1023401	All Organisms → cellular organisms → Bacteria	3090	Open in IMG/M
3300017929\|Ga0187849_1010016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6402	Open in IMG/M
3300017929\|Ga0187849_1080001	Not Available	1429	Open in IMG/M
3300017935\|Ga0187848_10134743	Not Available	1098	Open in IMG/M
3300017938\|Ga0187854_10023741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3365	Open in IMG/M
3300017938\|Ga0187854_10276869	Not Available	722	Open in IMG/M
3300017940\|Ga0187853_10012012	All Organisms → cellular organisms → Bacteria	5216	Open in IMG/M
3300017955\|Ga0187817_10950854	Not Available	550	Open in IMG/M
3300017998\|Ga0187870_1098410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1135	Open in IMG/M
3300018001\|Ga0187815_10168399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	927	Open in IMG/M
3300018004\|Ga0187865_1190914	Not Available	701	Open in IMG/M
3300018015\|Ga0187866_1116764	Not Available	1079	Open in IMG/M
3300018020\|Ga0187861_10176569	Not Available	969	Open in IMG/M
3300018020\|Ga0187861_10243883	Not Available	786	Open in IMG/M
3300018022\|Ga0187864_10018656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4342	Open in IMG/M
3300018022\|Ga0187864_10153341	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1136	Open in IMG/M
3300018023\|Ga0187889_10281490	Not Available	740	Open in IMG/M
3300018025\|Ga0187885_10307751	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300018030\|Ga0187869_10249710	Not Available	859	Open in IMG/M
3300018030\|Ga0187869_10377193	Not Available	677	Open in IMG/M
3300018030\|Ga0187869_10579787	Not Available	531	Open in IMG/M
3300018033\|Ga0187867_10185921	Not Available	1185	Open in IMG/M
3300018037\|Ga0187883_10312812	Not Available	802	Open in IMG/M
3300018046\|Ga0187851_10384187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Phytoactinopolyspora	805	Open in IMG/M
3300018047\|Ga0187859_10751517	Not Available	557	Open in IMG/M
3300018057\|Ga0187858_10134298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1660	Open in IMG/M
3300019788\|Ga0182028_1041498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2940	Open in IMG/M
3300019788\|Ga0182028_1209353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	895	Open in IMG/M
3300019788\|Ga0182028_1251677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1355	Open in IMG/M
3300022524\|Ga0224534_1026427	Not Available	1455	Open in IMG/M
3300022830\|Ga0224515_1020131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	986	Open in IMG/M
3300023068\|Ga0224554_1012339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2891	Open in IMG/M
3300023090\|Ga0224558_1019797	Not Available	3462	Open in IMG/M
3300023259\|Ga0224551_1005199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2165	Open in IMG/M
3300025432\|Ga0208821_1064922	Not Available	627	Open in IMG/M
3300025501\|Ga0208563_1096617	Not Available	573	Open in IMG/M
3300025507\|Ga0208188_1032121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1431	Open in IMG/M
3300025725\|Ga0209638_1038374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2065	Open in IMG/M
3300026450\|Ga0247847_1015659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1033	Open in IMG/M
3300027604\|Ga0208324_1029638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1651	Open in IMG/M
3300027625\|Ga0208044_1028604	All Organisms → cellular organisms → Bacteria	1916	Open in IMG/M
3300027905\|Ga0209415_10313935	Not Available	1339	Open in IMG/M
3300027905\|Ga0209415_10532149	Not Available	894	Open in IMG/M
3300028069\|Ga0255358_1000545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4624	Open in IMG/M
3300029952\|Ga0311346_10063687	Not Available	5098	Open in IMG/M
3300030051\|Ga0302195_10079294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1706	Open in IMG/M
3300031670\|Ga0307374_10011903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12276	Open in IMG/M
3300031670\|Ga0307374_10052440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4190	Open in IMG/M
3300031671\|Ga0307372_10264546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1010	Open in IMG/M
3300032160\|Ga0311301_10262857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2825	Open in IMG/M
3300033402\|Ga0326728_10004204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43171	Open in IMG/M
3300033402\|Ga0326728_10092512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3738	Open in IMG/M
3300033402\|Ga0326728_10282034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1539	Open in IMG/M
3300033402\|Ga0326728_10581492	Not Available	880	Open in IMG/M
3300033561\|Ga0371490_1073145	Not Available	957	Open in IMG/M
3300033755\|Ga0371489_0001118	All Organisms → cellular organisms → Bacteria	43171	Open in IMG/M
3300033818\|Ga0334804_001314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ODS25	14534	Open in IMG/M
3300033827\|Ga0334848_052116	Not Available	746	Open in IMG/M
3300033887\|Ga0334790_000108	All Organisms → cellular organisms → Bacteria	85332	Open in IMG/M
3300033887\|Ga0334790_040969	Not Available	1807	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.44%
Aquatic	Environmental → Aquatic	49.56%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	49.56%
Soil	Environmental → Terrestrial → Soil	33.63%
Peat	Environmental → Terrestrial → Peat	16.81%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	49.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	16.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	13.27%
Clay	Environmental → Terrestrial → Soil → Clay	2.65%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	30.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	17.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	16.81%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	15.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.39%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.54%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	2.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.89%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	23.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	15.04%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.50%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	10.62%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	9.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	7.08%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	5.31%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.54%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.54%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	2.65%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.77%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022830	Peat soil microbial communities from Stordalen Mire, Sweden - IR.F.S.T-25	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300025432	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 (SPAdes)	Environmental	Open in IMG/M
3300025501	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes)	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300026450	Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T25	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028069	Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T0	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033561	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300033827	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 5-9	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100489773	3300001356	Peatlands Soil	MATRAAVAKLETSADHRQNPGDYVVPVIHIHLPESAVKVGFYGGLAAAVVAGAVDLPLALLVGVGVAIARHRRA*
Ga0070733_104752241	3300005541	Surface Soil	MAVRESPAVTKLQGRGEHPHPANDFVVPVVHVHLPESAVKLGFYGGLGAAVALGAVDWPLAVLVGAGVAIARHRRA*
Ga0116128_10239951	3300009518	Peatland	KPQSSAGNGGSAGDYVVPVVHIHVPEPVVKAGFYGGLATAVVVGALDWPLVLLAGVGVAIARHRRA*
Ga0116222_10572962	3300009521	Peatlands Soil	MATRAGVAKLETSADHRQNPGDYVVPVIHIHLPESAVKVGFYGGLAAAVVAGAVDLPLALLVGVGVAIARHRRA*
Ga0116222_11605831	3300009521	Peatlands Soil	MATRAAVTKLQTSAENGQPRSDYVVPVIHIHLPESVVRVGFYGGLAAAVAAGAVDLPLALLVGVGVAIARHRRA*
Ga0116136_10559071	3300009547	Peatland	MMATRPVVTKRETAADSRRSPGDYVVPVVHVHLPEPVVKVGFYGGLAAAVAAGAVDWPIALLAGLGVAIIRHKQA*
Ga0116136_11881822	3300009547	Peatland	MVTRPVGTKRETAADRGRSPSDYVVPVVHIHLPEPVVKAGFYGGVAAAVATGAVDWPLVLLAGVGVAIVRHRRA*
Ga0116107_10253534	3300009548	Peatland	MVTRPVGTKRETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGVAAAVATGSVDWPLVLLAGVGVAIVRHRRA*
Ga0116107_10384253	3300009548	Peatland	MATRPIAKPQSSAGNGGSAGDYVVPVVHIHVPEPVVKAGFYGGLATAVVVGALDWPLVLLAGVGVAIARHRRA*
Ga0116107_10628322	3300009548	Peatland	TAADTARSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA*
Ga0116137_10187823	3300009549	Peatland	MVTRPVGTKRETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGVAAAVATGAVDWPLVLLAGVGVAIVRHRRA*
Ga0116137_10640871	3300009549	Peatland	MVTRPVRTKRETAADTARSPSDYVVPVVHVHLPEPVVKAGFYGGMAAAVATGAVDWPLVLLAGVGVAIVRHRRA*
Ga0116119_10707671	3300009629	Peatland	MVTRPVGTKRETAADRGRSPSDYVVPVVHIHLPEPVVKAGFYGGVAAAVATGAVDWPLALLVGVGVAIVRHRRA*
Ga0116114_10900112	3300009630	Peatland	MATRPAVTKRETSADNGRSPSDYVVPVVHVHVPEPVVKVGFYGGLAAAVAAGALDWPLVLLAGVGVAIARHRRA*
Ga0116122_11523402	3300009639	Peatland	MVTSPVRTKRETAADGGRSPSDYVVPVVHVHLPEPVVKAGFYGGMAAAVATGAVDWPLVLLAGVGVAIVRHRRA*
Ga0116110_10810042	3300009643	Peatland	MATRPAVNRQGSPGKGRSSGDYVVPVVHVHVPEPVVKAGFYGGLATAVAVGALDWPIVLLAGVGVAMVRHRRA*
Ga0116110_12483802	3300009643	Peatland	MVTRPVGTKRETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA*
Ga0116215_10082083	3300009672	Peatlands Soil	MATRSAVTKLQASADNGRHPSDYVVPVIHIHLPESVVKVGFYGGLAAAVAAGAVDLPLALLVGVGVAIARHQRA*
Ga0116216_100114291	3300009698	Peatlands Soil	RRTQRVGGTMATRAAVAKLETSADHRQNPGDYVVPVIHIHLPESAVKVGFYGGLAAAVVAGAVDLPLALLVGVGVAIARHRRA*
Ga0116130_10965942	3300009762	Peatland	MATRPAVTKRETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGVAAALAVGAVDWPLALLAGVGVAIARHRRA*
Ga0116223_102719631	3300009839	Peatlands Soil	MATRAAVTKLQTSAENGQPRSDYVVPVIHIHLPESVVRVGFYGGLAAAAAAGAVDLPLALLVGVGVAIARHRRA*
Ga0136449_1000266003	3300010379	Peatlands Soil	MATRAAVTKLQTSADNGQPPSDYVVPVFHIHLPESVVRVGFYGGLAAAAAAGAVDLPLALLVGVGVAIARHRRA*
Ga0136449_1004981513	3300010379	Peatlands Soil	MMATRPVVTKRETAADSGPPRGDYVVPVVHAHLPEAVVKAGFYGGLATAVVAGAVEWPMVLLAGLGVAILRHKRA*
Ga0181539_10819612	3300014151	Bog	MMATRPIAKPQSSAGNGGSAGDYVVPVVHIHVPEPVVKAGFYGGLATAVVVGALDWPLVLLAGVGVAIARHRRA*
Ga0181539_11763863	3300014151	Bog	RETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA*
Ga0181518_101592772	3300014156	Bog	MVTRPVGRKRETAADSGRSPSDYVVPVVHVHLPEPVVKAGFYGGMAAAVAAGALDWPLVLLAGVGVAIVRHRRA*
Ga0181521_102323132	3300014158	Bog	MVTRPVERKRETAADSGRSPSDYVVPVVHVHLPEPVVKAGFYGGMAAAVAAGALDWPLVLLAGVGVAIVRHRRA*
Ga0181530_100150963	3300014159	Bog	MMVTRPVERKRETAADSGRSPSDYVVPVVHVHLPEPVVKAGFYGGMAAAVAAGALDWPLALLAGVGVAIVRHKRA*
Ga0181538_102444562	3300014162	Bog	MMVTRPVERKRETAADSGRSPSDYVVPVVHVHLPEPVVKAGFYGGMAAAVAAGALDWPLVLLAGVGVAIVRHRRA*
Ga0181538_103564401	3300014162	Bog	MVTRPVVTKRGTATDSGCSPNDYVVPVVHVHLPEPVVKAGFYGGLATAVAVGALDWPLVLLTGVGVAIVRHRRA*
Ga0182018_100246402	3300014489	Palsa	MMATRPATKPQTSAGNERSAGDYVVPVVHVHVPDLVMKAGFYGGLATAVAVGALDWPLVLLAGVGVAIARHRRA*
Ga0182018_100404153	3300014489	Palsa	MATRPATKLQSVRNGRSAGDYVVPVVHVHVPEPVVKAGFYGGLATAVVVGALDWPLILLAGVGVAMARHRRA*
Ga0182010_103980691	3300014490	Fen	MVTRPVRTNREIAADAGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA*
Ga0182014_1000118024	3300014491	Bog	MATRPAVTKQQTSADNGRSPSDYVVPVLHVHLPEPVVKVGFYGGLAAAVAAGALDWPLVVLAGVGVAIVRHRRA*
Ga0182014_100284072	3300014491	Bog	MVTRPVGTKRETAADRGRSPSDYVVPVLHVHLPEPVVKAGFYGGVAAAVATGAVDWPLVLLAGVGVAIVRHRRA*
Ga0182014_100924192	3300014491	Bog	MMVTRPVRTNRETAADTARSPSDYVVPVVHVHLPEPVVKAGFYGGVAAAVAVGALDWPLVLLTGVGVAIARHQRA*
Ga0182013_106726881	3300014492	Bog	MMARRPAARSQVSVKDGRSTGDYVVPVVHVHVPEPVVKAGFYGGLATAVAVGALDWPLVLLAGVGVAMARHQRA*
Ga0182017_100554774	3300014494	Fen	MMVTRPVRTNRETAVDSGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA*
Ga0182017_103492161	3300014494	Fen	MVTRPVRTNRETAADTGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA*
Ga0182011_100229431	3300014496	Fen	MMVTRPVRTNREIAADAGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA*
Ga0182019_102852272	3300014498	Fen	MMVTRPVRTNRETAADTGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA*
Ga0182024_100496495	3300014501	Permafrost	MATRPATKPQTSVRSGRSAGDYVVPVVHVHVPQPVVKAGFYGGLATAVAVGALDWPLVLLAGLGVAMARHRRA*
Ga0182024_104058523	3300014501	Permafrost	MATRAAATKQAPPDKGSDRSSYVVPVIHTRLPEPLVNVGFYGGLAAAVVVGAVDLPLALLVGAGVVIARHKRA*
Ga0182021_108952522	3300014502	Fen	MATRPAVTKRETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGVAAALAVGPVDWPLAL
Ga0182021_137588752	3300014502	Fen	RTNREIAADAGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA*
Ga0181536_102609913	3300014638	Bog	MMVTRPVERKRETAADSGRSPSDYVVPVVHVHLSEPVVKAGFYGGMAAAVAAGALDWPLALLAGVGVAIVRHKRA*
Ga0182027_104662812	3300014839	Fen	MVTRPVRTNWETAADTARSPSDYVVPVVHVHLPEPVVKAGFYGGVAAAVAVGALDWPLVLLTGVGVAIARHQRA*
Ga0182027_111305961	3300014839	Fen	MVTRPVRTNRETAADTARSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA*
Ga0181515_11672772	3300016730	Peatland	VTRPVERKRETAADSGRSPSDYVVPVVHVHLSEPVVKAGFYGGMAAAVAAGALDWPLALLAGVGVAIVRHKRA
Ga0187812_10822252	3300017821	Freshwater Sediment	MATRAQVTKLQTSADGNTPGGYVVPLVHIHLPESAVKVGFYGGLAAAVAAGAVDLPLALLVGVGVVIARHGRA
Ga0187812_11272812	3300017821	Freshwater Sediment	MATRAAVAKLQTPAGDQGHAGDYVVPVVHIHLPESAVKVGFYGGLAVAVVAGAVDLPLALLVGVGVAIARHRRA
Ga0187856_10115115	3300017925	Peatland	MVTSPVRTKRETAADGGRSPSDYVVPVVHVHLPEPVVKAGFYGGMAAAVATGAVDWPLVLLAGVGVAIVRHRRA
Ga0187856_10211957	3300017925	Peatland	MVTRPVGRKRETAADSGRSPSDYVVPMVHVHLPEPVVKAGFYGGMAAAVATGALDWPLVLLAGVGVAIVRHRRA
Ga0187856_10234014	3300017925	Peatland	MATRPVVTKRETAADSRRSPGDYVVPVVHVHLPEPVVKVGFYGGLAAAVAAGAVDWPIALLAGLGVAIIRHKQA
Ga0187849_10100162	3300017929	Peatland	MVTRPVGTKRETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGVAAAVATGAVDWPLVLLAGVGVAIVRHRRA
Ga0187849_10800012	3300017929	Peatland	MVTRPVRTKRETAADTARSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA
Ga0187848_101347432	3300017935	Peatland	MATRPVVPKRENAADGGRSPSDYVVPVVHAHLPEPVVKAGFYGGLAAALAAGALDWPLVLLAGVGVAIVRHKRA
Ga0187854_100237412	3300017938	Peatland	MATRPAVNRQGSPGKGRSSGDYVVPVVHVHVPEPVVKAGFYGGLATAVAVGALDWPIVLLAGVGVAMVRHRRA
Ga0187854_102768691	3300017938	Peatland	MVTRPVGTKRETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA
Ga0187853_100120123	3300017940	Peatland	MATRPIAKPQSSAGNGGSAGDYVVPVVHIHVPEPVVKAGFYGGLATAVVVGALDWPLVLLAGVGVAIARHRRA
Ga0187817_109508541	3300017955	Freshwater Sediment	MATRAAVAKLQTPAGDQGHPGDYVVPVVHIHLPESAVKVGFYGGLAAAVVAGAVDLPLALLVGVGVAIARHRRA
Ga0187870_10984101	3300017998	Peatland	VGTKRETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGVAAAVATGAVDWPLVLLAGVGVAIVRHRRA
Ga0187815_101683992	3300018001	Freshwater Sediment	MATRAAVAKLQTPAGDQGHPGDYVVPVVHIHLPESAVKVGFYGGLAAAVVAGAVDLPLALLVGV
Ga0187865_11909141	3300018004	Peatland	MVTRPVGTKRETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVA
Ga0187866_11167642	3300018015	Peatland	MVTRPVGTKRETAADRGRSPSDYVVPVVHIHLPEPVVKAGFYGGVAAAVATGAVDWPLALLVGVGVA
Ga0187861_101765692	3300018020	Peatland	MVTRPVGTQRETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGVAAAVATGAVDWPLVLLAGVGVAIVRHRRA
Ga0187861_102438831	3300018020	Peatland	MVTRPVRTKRETAADTARSPSDYVVPVVHVHLPEPVVKAGFYGGMAAAVATGALDWPLVLLAGVGVAIVRHRRA
Ga0187864_100186563	3300018022	Peatland	MVTRPVGRKRETAADSGRSPSDYVVPMVHVHLPEPVVKAGFYGGMAAAVATGAVDWPLVLLAGVGVAIVRHRRA
Ga0187864_101533411	3300018022	Peatland	MVTSPVRTKRETAADGGRSPSDYVVPVVHVHLPEPVVKAGFYGGMAAAVATGAVDWPLVL
Ga0187889_102814901	3300018023	Peatland	MATRPIAKPQSSAGNGGSAGDYVVPVVHIHVPEPVVKAGFYGGLATAVVVGALDWPLVLL
Ga0187885_103077513	3300018025	Peatland	VVTKRETAADSRRSPGDYVVPVVHVHLPEPVVKVGFYGGLAAAVAAGAVDWPIALLAGLGVAIIRHKQA
Ga0187869_102497102	3300018030	Peatland	MATRPAVNRQGSPGKGRSSGDYVVPVVHVHVPEPVVKAGFYGGLATAVAVGALDWPIVLLAGVGVAIVRHRRA
Ga0187869_103771932	3300018030	Peatland	MVTRPVGTKRETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGVAAAVATGAVDWPLALLVGVGVAIVRHRRA
Ga0187869_105797871	3300018030	Peatland	MVTRPVRTKRETAADTARSPSDYVVPVVHVHLPEPVVKSGFYGGFATAAVVGALDWPLVLLTGVGVAIVRHRRA
Ga0187867_101859212	3300018033	Peatland	MATRPAVTKRETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGVAAALAVGAVDWPLALLAGVGVAIARHRRA
Ga0187883_103128121	3300018037	Peatland	MVTRPVGTKRETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAVAVGALDWPLVLLTGVGVAIVRHRRA
Ga0187851_103841871	3300018046	Peatland	KRETAADRGRSPSDYVVPVVHIHLPEPVVKAGFYGGVAAAVATGAVDWPLALLVGVGVAIVRHRRA
Ga0187859_107515171	3300018047	Peatland	MATRPVVTKRGTATDSGCSPNDYVVPVVHVHLPEPVVKAGFYGGLATAVAVGALDWPLVLLTGVGVAIVRHRRA
Ga0187858_101342982	3300018057	Peatland	MATRPAVNRQGSHGKGRSSGDYVVPVVHVHVPEPVVKAGFYGGLATAVAVGALDWPIVLLAGVGVAMVRHRRA
Ga0182028_10414982	3300019788	Fen	MVTRPVRTNRETAVDSGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA
Ga0182028_12093533	3300019788	Fen	MVTRPVRPNRETAVDSGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA
Ga0182028_12516772	3300019788	Fen	MVTRPVRTNREIAADTGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA
Ga0224534_10264273	3300022524	Soil	MVTRPVRTNRETAADTGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIIRHRRA
Ga0224515_10201312	3300022830	Soil	MVTRPVRTNREIAADAGRSTSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA
Ga0224554_10123393	3300023068	Soil	MVTRPVRTNRETAADTGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA
Ga0224558_10197972	3300023090	Soil	MMVTRPVRTNRETAADTARSPSDYVVPVVHVHLPEPVVKAGFYGGVAAAVAVGALDWPLVLLTGVGVAIARHQRA
Ga0224551_10051994	3300023259	Soil	MATRPATKPQTSAGNERSAGDYVVPVVHVHVPDLVMKAGFYGGLATAVAVGALDWPLVLLAGVGVAIARHRRA
Ga0208821_10649222	3300025432	Peatland	MATRPVVTKRETAADSGRSPSDYVVPMVHVHLPEPVVKAGFYGGMAAAVATGALDWPLVLLAGVGVAIVRHRRA
Ga0208563_10966172	3300025501	Peatland	TRPVGTKRETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGMAAAVATGAVDWPLALLVGVGVAIVRHRRA
Ga0208188_10321213	3300025507	Peatland	MVTRPVGTKRETAADRGRSPSDYVVPVVHIHLPEPVVKAGFYGGVAAAVATGAVDWPLALLVGVGVAIVRHRRA
Ga0209638_10383743	3300025725	Arctic Peat Soil	MPTNGAAAKGHTPAGDGHNSTDFVVPVIHTHLPESVVNVGFYGGLAAAVVVGAVELPLALLAGLGVAVARHRRA
Ga0247847_10156591	3300026450	Soil	GIMATRPAVTKRETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGVAAALAVGAVDWPLALLAGVGVAIARHRRA
Ga0208324_10296383	3300027604	Peatlands Soil	MATRAAVAKLETSADHRQNPGDYVVPVIHIHLPESAVKVGFYGGLAAAVVAGAVDLPLALLVGVGVAIARHRRA
Ga0208044_10286042	3300027625	Peatlands Soil	MATRAAVTKLQTSAENGQPRSDYVVPVIHIHLPESVVRVGFYGGLAAAVAAGAVDLPLALLVGVGVAIARHRRA
Ga0209415_103139352	3300027905	Peatlands Soil	MATRSAVTKLQASADNGRHPSDYVVPVIHIHLPESVVKVGFYGGLAAAVAAGAVDLPLALLVGVGVAIARHQRA
Ga0209415_105321491	3300027905	Peatlands Soil	MATRAAVTKLQTSADNGQPPSDYVVPVFHIHLPESVVRVGFYGGLAAAAAAGAVDLPLALLVGVGVAIARHRRA
Ga0255358_10005452	3300028069	Soil	MMVTRPVRTNRETAVDSGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAAVVGALDWPLVLLTGVGVAIVRHRRA
Ga0311346_100636871	3300029952	Bog	MMARRPAARSQVSVKDGRSTGDYVVPVVHVHVPEPVVKAGFYGGLATAVAVGALDWPLVLLAGVGVAMARHQRA
Ga0302195_100792941	3300030051	Bog	MARRPAARSQVSVKDGRSTGDYVVPVVHVHVPEPVVKAGFYGGLATAVAVGALDWPLVLLAGVGVAMARHQRA
Ga0307374_100119033	3300031670	Soil	MATRAAVTKLQASADNGQPRGDYVVPVIHIHLPESAVRVAFYGGLAAAVVGGAVELPLALLVGVGVVIARHRRV
Ga0307374_100524403	3300031670	Soil	MATRAAVTKLQASADNGQPHGDYVVPVIHIHLPESAVRVGFYGGLAAAVVTGAVDLPLALLVGVGVVIARHRRA
Ga0307372_102645461	3300031671	Soil	KLQASADNGQPHGDYVVPVIHIHLPESAVRVGFYGGLAAAVVTGAVDLPLALLVGVGVVIARHRRA
Ga0311301_102628572	3300032160	Peatlands Soil	MATRPVVTKRESAADSGPSRGDYVVPVVHVHLPEPVVKAGFYGGLATAVVAGAVEWPMVLLAGLGVAILRHKRA
Ga0326728_100042042	3300033402	Peat Soil	MVTRPVERKRETAADSGRSPSDYVVPVVHVHLPEPVVKAGFYGGVAAAVATGALDWPLVLLAGVGVAIVRHRRA
Ga0326728_100925123	3300033402	Peat Soil	MATRPVVTKGQTSAGNGHSCSDYVVPVVHVHVPEPVVKVGFYGGLAAAVAAGAVEWPLALLAGVGVAIVRHRRA
Ga0326728_102820342	3300033402	Peat Soil	MATRPAVTKRETSADNGRSPSDYVVPVVHVHVPEPVVKVGFYGGLAAAVAAGALDWPLVLLAGVGVAIARHRRA
Ga0326728_105814923	3300033402	Peat Soil	MVTRPVGRKREAAADSGRSPSDYVVPVVHVHLPEPVVKAGFYGGLATAVAVGALDWPLVLLAGVGVAMARHRRA
Ga0371490_10731453	3300033561	Peat Soil	MATRPIAKPQSSAGNGSSAGDYVVPVVHIHVPEPVVKAGFYGGLATAVVVGALDWPLVLLAGVGVAIARHRRA
Ga0371489_0001118_37988_38215	3300033755	Peat Soil	MMVTRPVERKRETAADSGRSPSDYVVPVVHVHLPEPVVKAGFYGGVAAAVATGALDWPLVLLAGVGVAIVRHRRA
Ga0334804_001314_10195_10416	3300033818	Soil	MATSAAATKQALPAKGRGPSDYVVPVIHTHLPEPVVNVGFYGGLVAAAVVGAVDLPLALLVGVGVAIARHRRA
Ga0334848_052116_3_245	3300033827	Soil	SHGDHLRESLAERRKRETAADRGRSPSDYVVPVVHVHLPEPVVKAGFYGGVAAALAVGAVDWPLALLAGVGVAIARHRRA
Ga0334790_000108_4622_4846	3300033887	Soil	MATRAAVTKLETSADKEHESHDYVVPVIHIHLPESVVKVGFYSGLAAALAAGAVDLPLALLFGVGVAMARHRRV
Ga0334790_040969_349_573	3300033887	Soil	MATRPAVTKRQTSAGNGRSPSDYVVPVVHVHLPEPVVKVGFYGGLATAVAVGALDWPLVLLAGVGVAIARHRRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082041

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences