Metagenome Family F082037

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F082037
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	41 residues
Representative Sequence	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVQTT
Number of Associated Samples	64
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.12 %
% of genes from short scaffolds (< 2000 bps)	97.35 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (57.522 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland (46.903 % of family members)
Environment Ontology (ENVO)	Unclassified (91.150 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (93.805 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.41% β-sheet: 0.00% Coil/Unstructured: 36.59%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF10544	T5orf172	1.77

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
All Organisms	root	All Organisms	42.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
Viruses	superkingdom	All Organisms → Viruses	42.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	42.48 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009518\|Ga0116128_1056411	Not Available	1226	Open in IMG/M
3300009518\|Ga0116128_1066370	Not Available	1110	Open in IMG/M
3300009518\|Ga0116128_1203270	Not Available	556	Open in IMG/M
3300009519\|Ga0116108_1088304	Not Available	946	Open in IMG/M
3300009519\|Ga0116108_1105873	Not Available	849	Open in IMG/M
3300009519\|Ga0116108_1129942	Not Available	752	Open in IMG/M
3300009519\|Ga0116108_1163639	Not Available	658	Open in IMG/M
3300009547\|Ga0116136_1040332	All Organisms → Viruses → Predicted Viral	1364	Open in IMG/M
3300009548\|Ga0116107_1133229	Not Available	701	Open in IMG/M
3300009552\|Ga0116138_1033739	All Organisms → Viruses → Predicted Viral	1519	Open in IMG/M
3300009616\|Ga0116111_1040446	All Organisms → Viruses → Predicted Viral	1413	Open in IMG/M
3300009616\|Ga0116111_1048097	Not Available	1249	Open in IMG/M
3300009617\|Ga0116123_1045333	Not Available	1271	Open in IMG/M
3300009618\|Ga0116127_1125074	Not Available	658	Open in IMG/M
3300009629\|Ga0116119_1034177	All Organisms → Viruses → Predicted Viral	1355	Open in IMG/M
3300009632\|Ga0116102_1059139	All Organisms → Viruses → Predicted Viral	1181	Open in IMG/M
3300009634\|Ga0116124_1039452	All Organisms → Viruses → Predicted Viral	1427	Open in IMG/M
3300009637\|Ga0116118_1032509	All Organisms → Viruses → Predicted Viral	1908	Open in IMG/M
3300009639\|Ga0116122_1208769	Not Available	610	Open in IMG/M
3300009640\|Ga0116126_1056903	All Organisms → Viruses → Predicted Viral	1509	Open in IMG/M
3300009640\|Ga0116126_1098089	All Organisms → Viruses → Predicted Viral	1046	Open in IMG/M
3300009643\|Ga0116110_1054067	All Organisms → Viruses → Predicted Viral	1435	Open in IMG/M
3300009643\|Ga0116110_1251573	Not Available	566	Open in IMG/M
3300014159\|Ga0181530_10230611	Not Available	1002	Open in IMG/M
3300014162\|Ga0181538_10245022	Not Available	989	Open in IMG/M
3300014495\|Ga0182015_10037716	Not Available	3648	Open in IMG/M
3300017925\|Ga0187856_1077583	Not Available	1369	Open in IMG/M
3300017925\|Ga0187856_1091271	Not Available	1228	Open in IMG/M
3300017925\|Ga0187856_1120194	All Organisms → Viruses → Predicted Viral	1020	Open in IMG/M
3300017925\|Ga0187856_1241979	Not Available	639	Open in IMG/M
3300017929\|Ga0187849_1343681	Not Available	552	Open in IMG/M
3300017938\|Ga0187854_10205242	Not Available	869	Open in IMG/M
3300017940\|Ga0187853_10101398	All Organisms → Viruses → Predicted Viral	1416	Open in IMG/M
3300017940\|Ga0187853_10117936	All Organisms → Viruses → Predicted Viral	1293	Open in IMG/M
3300017940\|Ga0187853_10197207	Not Available	943	Open in IMG/M
3300017940\|Ga0187853_10301224	Not Available	725	Open in IMG/M
3300017940\|Ga0187853_10409565	Not Available	599	Open in IMG/M
3300017996\|Ga0187891_1075891	All Organisms → Viruses → Predicted Viral	1327	Open in IMG/M
3300017996\|Ga0187891_1107141	All Organisms → Viruses → Predicted Viral	1046	Open in IMG/M
3300017996\|Ga0187891_1229214	Not Available	624	Open in IMG/M
3300018002\|Ga0187868_1082855	All Organisms → Viruses → Predicted Viral	1276	Open in IMG/M
3300018002\|Ga0187868_1116516	All Organisms → Viruses → Predicted Viral	1010	Open in IMG/M
3300018002\|Ga0187868_1228011	Not Available	636	Open in IMG/M
3300018002\|Ga0187868_1309307	Not Available	520	Open in IMG/M
3300018003\|Ga0187876_1084830	Not Available	1208	Open in IMG/M
3300018003\|Ga0187876_1154586	Not Available	799	Open in IMG/M
3300018004\|Ga0187865_1195106	Not Available	692	Open in IMG/M
3300018005\|Ga0187878_1081859	All Organisms → Viruses → Predicted Viral	1358	Open in IMG/M
3300018005\|Ga0187878_1157444	Not Available	875	Open in IMG/M
3300018009\|Ga0187884_10120493	Not Available	1125	Open in IMG/M
3300018013\|Ga0187873_1106287	Not Available	1106	Open in IMG/M
3300018013\|Ga0187873_1123718	All Organisms → Viruses → Predicted Viral	1004	Open in IMG/M
3300018013\|Ga0187873_1139095	Not Available	933	Open in IMG/M
3300018014\|Ga0187860_1099399	All Organisms → Viruses → Predicted Viral	1326	Open in IMG/M
3300018014\|Ga0187860_1199046	Not Available	822	Open in IMG/M
3300018015\|Ga0187866_1050684	All Organisms → Viruses → Predicted Viral	1883	Open in IMG/M
3300018016\|Ga0187880_1087341	Not Available	1563	Open in IMG/M
3300018016\|Ga0187880_1120052	All Organisms → Viruses → Predicted Viral	1270	Open in IMG/M
3300018016\|Ga0187880_1226068	Not Available	836	Open in IMG/M
3300018017\|Ga0187872_10128216	Not Available	1237	Open in IMG/M
3300018019\|Ga0187874_10115361	All Organisms → Viruses → Predicted Viral	1158	Open in IMG/M
3300018019\|Ga0187874_10173872	Not Available	903	Open in IMG/M
3300018019\|Ga0187874_10260280	Not Available	710	Open in IMG/M
3300018020\|Ga0187861_10124247	All Organisms → Viruses → Predicted Viral	1216	Open in IMG/M
3300018021\|Ga0187882_1096662	All Organisms → Viruses → Predicted Viral	1269	Open in IMG/M
3300018023\|Ga0187889_10204051	Not Available	908	Open in IMG/M
3300018024\|Ga0187881_10094075	Not Available	1363	Open in IMG/M
3300018026\|Ga0187857_10369304	Not Available	649	Open in IMG/M
3300018026\|Ga0187857_10399478	Not Available	620	Open in IMG/M
3300018030\|Ga0187869_10113009	All Organisms → Viruses → Predicted Viral	1365	Open in IMG/M
3300018030\|Ga0187869_10158812	Not Available	1118	Open in IMG/M
3300018037\|Ga0187883_10486963	Not Available	635	Open in IMG/M
3300018040\|Ga0187862_10661639	Not Available	613	Open in IMG/M
3300019082\|Ga0187852_1348243	Not Available	583	Open in IMG/M
3300025419\|Ga0208036_1019344	All Organisms → Viruses → Predicted Viral	1411	Open in IMG/M
3300025419\|Ga0208036_1039334	Not Available	848	Open in IMG/M
3300025423\|Ga0208746_1024533	All Organisms → Viruses → Predicted Viral	1056	Open in IMG/M
3300025439\|Ga0208323_1021572	All Organisms → Viruses → Predicted Viral	1382	Open in IMG/M
3300025442\|Ga0208034_1038162	All Organisms → Viruses → Predicted Viral	1087	Open in IMG/M
3300025446\|Ga0208038_1023769	All Organisms → Viruses → Predicted Viral	1423	Open in IMG/M
3300025446\|Ga0208038_1024268	All Organisms → Viruses → Predicted Viral	1400	Open in IMG/M
3300025446\|Ga0208038_1031372	Not Available	1148	Open in IMG/M
3300025446\|Ga0208038_1046741	Not Available	850	Open in IMG/M
3300025446\|Ga0208038_1067790	Not Available	645	Open in IMG/M
3300025459\|Ga0208689_1023973	All Organisms → Viruses → Predicted Viral	1587	Open in IMG/M
3300025459\|Ga0208689_1029949	All Organisms → Viruses → Predicted Viral	1317	Open in IMG/M
3300025459\|Ga0208689_1091671	Not Available	547	Open in IMG/M
3300025460\|Ga0208562_1022230	All Organisms → Viruses → Predicted Viral	1511	Open in IMG/M
3300025460\|Ga0208562_1024865	All Organisms → Viruses → Predicted Viral	1411	Open in IMG/M
3300025466\|Ga0208497_1034471	Not Available	1075	Open in IMG/M
3300025466\|Ga0208497_1036272	All Organisms → Viruses → Predicted Viral	1038	Open in IMG/M
3300025469\|Ga0208687_1083328	Not Available	700	Open in IMG/M
3300025469\|Ga0208687_1099561	Not Available	609	Open in IMG/M
3300025472\|Ga0208692_1035487	All Organisms → Viruses → Predicted Viral	1294	Open in IMG/M
3300025480\|Ga0208688_1017390	Not Available	1912	Open in IMG/M
3300025480\|Ga0208688_1027968	All Organisms → Viruses → Predicted Viral	1374	Open in IMG/M
3300025480\|Ga0208688_1029832	All Organisms → Viruses → Predicted Viral	1313	Open in IMG/M
3300025480\|Ga0208688_1035491	All Organisms → Viruses → Predicted Viral	1159	Open in IMG/M
3300025496\|Ga0208191_1048318	Not Available	930	Open in IMG/M
3300025501\|Ga0208563_1023836	All Organisms → Viruses → Predicted Viral	1574	Open in IMG/M
3300025501\|Ga0208563_1031203	All Organisms → Viruses → Predicted Viral	1278	Open in IMG/M
3300025506\|Ga0208937_1013992	All Organisms → Viruses → Predicted Viral	2058	Open in IMG/M
3300025506\|Ga0208937_1028826	Not Available	1359	Open in IMG/M
3300025507\|Ga0208188_1023722	Not Available	1753	Open in IMG/M
3300025507\|Ga0208188_1139764	Not Available	520	Open in IMG/M
3300025576\|Ga0208820_1013308	Not Available	2835	Open in IMG/M
3300025812\|Ga0208457_1026928	Not Available	1379	Open in IMG/M
3300031759\|Ga0316219_1041541	All Organisms → Viruses → Predicted Viral	1945	Open in IMG/M
3300031759\|Ga0316219_1080640	All Organisms → Viruses → Predicted Viral	1272	Open in IMG/M
3300032117\|Ga0316218_1058607	Not Available	1617	Open in IMG/M
3300032117\|Ga0316218_1118285	All Organisms → Viruses → Predicted Viral	1019	Open in IMG/M
3300032665\|Ga0316221_1057328	All Organisms → Viruses → Predicted Viral	1545	Open in IMG/M
3300032753\|Ga0316224_1182391	Not Available	709	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.11%
Terrestrial	Environmental → Terrestrial	0.89%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	99.11%
Soil	Environmental → Terrestrial → Soil	0.89%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	91.15%
Lentic	Environmental → Aquatic → Freshwater → Lentic	7.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	46.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	44.25%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	5.31%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	2.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	46.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	42.48%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	5.31%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.77%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300025419	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 (SPAdes)	Environmental	Open in IMG/M
3300025423	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025439	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025446	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100 (SPAdes)	Environmental	Open in IMG/M
3300025459	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150 (SPAdes)	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300025466	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025469	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025472	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes)	Environmental	Open in IMG/M
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental	Open in IMG/M
3300025496	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)	Environmental	Open in IMG/M
3300025501	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes)	Environmental	Open in IMG/M
3300025506	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300025812	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300032117	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003	Environmental	Open in IMG/M
3300032665	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007	Environmental	Open in IMG/M
3300032753	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18013	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116128_10564112	3300009518	Peatland	MYDTLKKSQYKVVSVGALASAVRPRIERSIEQVLNADVQTTRE
Ga0116128_10663703	3300009518	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNADVQTTREARFP
Ga0116128_12032701	3300009518	Peatland	MFDTLKRSEYKVVSVGALASAVRPRIERSIEQVLNADVQ
Ga0116108_10883042	3300009519	Peatland	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQVLNADVQ
Ga0116108_11058732	3300009519	Peatland	MFDTLRSEYKVVSIGALASAVRPRIERSIEQVLNADVQTTREARF
Ga0116108_11299421	3300009519	Peatland	MYDTLKKSQYKVVSIGALASAVRPRIERSIEQVLNAD
Ga0116108_11636393	3300009519	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVQTTREARF
Ga0116136_10403321	3300009547	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNADVRTTNQKRF
Ga0116107_11332293	3300009548	Peatland	MFDTLRKSQYKVVSTGALASAVRPRIERSIEQALNGDVRTTNQKRFG
Ga0116138_10337392	3300009552	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNGDVRTTNQKRFG
Ga0116111_10404466	3300009616	Peatland	MFDTLKRSEYKVVSVGALASAVRPRIERSIEQVLNADVQSTR
Ga0116111_10480973	3300009616	Peatland	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQVLNA
Ga0116123_10453333	3300009617	Peatland	MFDTLRKSQYKVVSVGALASAVRPRIERSIEQALNADVQSTREA
Ga0116127_11250741	3300009618	Peatland	MESKMFDTLKRSEYKVVSVGALASAVRPRIERSIEQVL
Ga0116119_10341771	3300009629	Peatland	MFDTLKRSEYKVISIGALASAVRPRIERSIEQALNGDVRTTNQKRF
Ga0116102_10591391	3300009632	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNGD
Ga0116124_10394521	3300009634	Peatland	MFDTLKRSEYKVVSVGALASAVRPRIERSIEQVLNADVQTTREAR
Ga0116118_10325092	3300009637	Peatland	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQALNADVQ
Ga0116122_12087691	3300009639	Peatland	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQVLNADVQTTREAR
Ga0116126_10569034	3300009640	Peatland	MYDTLKKSQYKVVSIGALASAVRPRIERSIEQALNADV
Ga0116126_10980891	3300009640	Peatland	MFDTLRKSQYKVVSVGALASAVRPRIERSIEQVLNADVQTT
Ga0116110_10540673	3300009643	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVRTTNQKRFG
Ga0116110_12515732	3300009643	Peatland	MFDTLRKGYKVVSVGALASAVRPRIERSIEQVLNADV
Ga0181530_102306113	3300014159	Bog	MFDTLKRSEYKVISIGALASAVRPRIERSIEQALNGDVRTTNQK
Ga0181538_102450223	3300014162	Bog	MFDTLRKGYKVVSVGALASAVRPRIERSIEQVLNADVQSTREARFP
Ga0182015_100377166	3300014495	Palsa	MFDTLKRSEYKVVRNGALPFVTRPRIERSIEQVLNADIQT
Ga0187856_10775831	3300017925	Peatland	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQALNADVQTTREAR
Ga0187856_10912712	3300017925	Peatland	MFDTLRKSQYKVVSVGALASAVRPRIERSIEQVLNADVQTTREARF
Ga0187856_11201944	3300017925	Peatland	MFDTLRKSQYKVVSVGALASAVRPRIERSIEQVLNADVQTTREARFPR
Ga0187856_12419793	3300017925	Peatland	MFDTLRKSQYKVVSVGALASAVRPRIERSIEQVLN
Ga0187849_13436813	3300017929	Peatland	MFDTLKRSEYKVVSVGALASAVRPRIERSIEQVLNA
Ga0187854_102052422	3300017938	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIGQVLNADVQ
Ga0187853_101013983	3300017940	Peatland	MFDTLKRSEYKVVSIGALASAVRHRIERSIEQVLNADVQTTREA
Ga0187853_101179365	3300017940	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVQTTREA
Ga0187853_101972071	3300017940	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVQSTRE
Ga0187853_103012243	3300017940	Peatland	MFDTLRKSQYKVVSVGALASAVRPRIERSIEQVLNADVQ
Ga0187853_104095651	3300017940	Peatland	MSNTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVQTTREAR
Ga0187891_10758914	3300017996	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNG
Ga0187891_11071411	3300017996	Peatland	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQVLNADVQTT
Ga0187891_12292141	3300017996	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVQ
Ga0187868_10828551	3300018002	Peatland	MFDTLKRSEYKVVSVGALASAVRPRIERSIEQVLNADVQTTREARFP
Ga0187868_11165164	3300018002	Peatland	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQVLN
Ga0187868_12280114	3300018002	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVQTTREARFPR
Ga0187868_13093071	3300018002	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNADVQ
Ga0187876_10848301	3300018003	Peatland	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQVLNAD
Ga0187876_11545862	3300018003	Peatland	MFDTLRKGYKVVSIGALASAVRPRIERSIEQVLNA
Ga0187865_11951061	3300018004	Peatland	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQVLNADVQT
Ga0187878_10818591	3300018005	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNADVQTTRE
Ga0187878_11574442	3300018005	Peatland	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQVLNADV
Ga0187884_101204933	3300018009	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVQRTREAR
Ga0187873_11062873	3300018013	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVQTTREARFP
Ga0187873_11237183	3300018013	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNADV
Ga0187873_11390954	3300018013	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNAD
Ga0187860_10993994	3300018014	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNA
Ga0187860_11990461	3300018014	Peatland	MFDTLRKGYKVVSVGALASAVRPRIERSIEQVLNAD
Ga0187866_10506842	3300018015	Peatland	MFDTLKRSEYKVVSIGALVSAVRPRIERSIKQVLN
Ga0187880_10873412	3300018016	Peatland	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQALNADVQT
Ga0187880_11200521	3300018016	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNADVQSTRE
Ga0187880_12260682	3300018016	Peatland	MFDTLRKGYKVVSVGALASAVRPRIERSIEQVLNADVQSTREARF
Ga0187872_101282163	3300018017	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVQSTREA
Ga0187874_101153612	3300018019	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVQT
Ga0187874_101738724	3300018019	Peatland	MFDTLKRSEYKVVSVGALSSAVRPRIELSIEQALNGDV
Ga0187874_102602802	3300018019	Peatland	MFHTLKRSEYKVVSVGALASAVRPRIERSIEQVLNA
Ga0187861_101242474	3300018020	Peatland	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQALNADVQTTREA
Ga0187882_10966624	3300018021	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADV
Ga0187889_102040513	3300018023	Peatland	MFDTLRKSQYKVVSVGALASAVRPRIERSIEQVLNA
Ga0187881_100940751	3300018024	Peatland	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQALN
Ga0187857_103693042	3300018026	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNGDVGTTNQK
Ga0187857_103994781	3300018026	Peatland	MFDTLKRSEYKVVSVGALASAVRPRIERSIEQVLNADVQT
Ga0187869_101130092	3300018030	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNADVQTTREA
Ga0187869_101588123	3300018030	Peatland	MFDTLKRSKYKVVSIGALASAVRPRIERSIEQVLNA
Ga0187883_104869632	3300018037	Peatland	MYDTLKKSQYKVVSVGALASAVRPRIERSIEQVLNADV
Ga0187862_106616392	3300018040	Peatland	MFDTLRKGYKVVSVGALASAVRPRIERSIEQVLNADVQSTREA
Ga0187852_13482432	3300019082	Peatland	MFDTLRKGYKVVSVGALASAVRPRIERSIEQVLNADVQTTRE
Ga0208036_10193441	3300025419	Peatland	MFDTLKRSEYKVVSVGALASAVRPRIERSIEQALNADV
Ga0208036_10393341	3300025419	Peatland	MFDTLRKGYKVVSVGALASAVRPRIERSIEQVLNADVQSTREAR
Ga0208746_10245332	3300025423	Freshwater	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALN
Ga0208323_10215723	3300025439	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNA
Ga0208034_10381621	3300025442	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVQTTR
Ga0208038_10237691	3300025446	Peatland	MFDTLKRSEYKVISIGALASAVRPRIERSIEQALNGDVRTTN
Ga0208038_10242681	3300025446	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVQTTRE
Ga0208038_10313723	3300025446	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVQS
Ga0208038_10467413	3300025446	Peatland	MFDTLRKGYKVVSIGALASAVRPRIERSIEQVLNADVQTTREAR
Ga0208038_10677902	3300025446	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVQTTREAR
Ga0208689_10239734	3300025459	Peatland	MFDTLRKSQYKVVSVGALASAVRPRIERSIEQVLNADVQTTREA
Ga0208689_10299491	3300025459	Peatland	MFDTLRKSQYKVVSVGALASAVRPRIERSIEQVLNADVQTTREARFP
Ga0208689_10916711	3300025459	Peatland	MYDTLKKSQYKVVSVGALASAVRPRIERSIEQALNADVRTTNQK
Ga0208562_10222301	3300025460	Peatland	MFDTLRKSQYKVVSVGALASAVRPRIERSIEQVLNADVRT
Ga0208562_10248653	3300025460	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNGDVRTT
Ga0208497_10344713	3300025466	Freshwater	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNADVQS
Ga0208497_10362724	3300025466	Freshwater	MFDTLKRSEYKVVSVGALASAVRPRIERSIEQVLNADVQS
Ga0208687_10833281	3300025469	Peatland	MFDTLRKGYKVVSVGALASAVRPRIERSIEQVLNADVQTTREARF
Ga0208687_10995612	3300025469	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNAG
Ga0208692_10354871	3300025472	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVRT
Ga0208688_10173901	3300025480	Peatland	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQVLNADVQTTR
Ga0208688_10279681	3300025480	Peatland	MFDTLKRSEYKVVSVGALASAVRPRIERSIEQALNGDVRTTNQKRF
Ga0208688_10298321	3300025480	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNGDVQ
Ga0208688_10354912	3300025480	Peatland	MFDTLRKSQYKVVSVGALASAVRPRIERSIEQVLNADVQTTR
Ga0208191_10483184	3300025496	Peatland	MFDTLKRSEYKVVSTGALASAVRPRIERSIEQALNGDVRTTNQKR
Ga0208563_10238364	3300025501	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVQTT
Ga0208563_10312032	3300025501	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNADVQTTR
Ga0208937_10139921	3300025506	Peatland	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNGDV
Ga0208937_10288262	3300025506	Peatland	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQALNADVQTT
Ga0208188_10237222	3300025507	Peatland	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQALNAD
Ga0208188_11397641	3300025507	Peatland	MFDTLRKGYKVVSVGALASAVRPRIERSIEQVLNADVQ
Ga0208820_10133085	3300025576	Peatland	MFDTLKRSEYKVISIGALASAVRPRIERSIEQALNGDVRT
Ga0208457_10269281	3300025812	Peatland	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQALNADVQSTRE
Ga0316219_10415415	3300031759	Freshwater	MFDTLKRSEYKVVSVGALASAVRPRIERSIEQVLN
Ga0316219_10806402	3300031759	Freshwater	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNGDVRTTN
Ga0316218_10586072	3300032117	Freshwater	MFDTLRKSQYKVVSIGALASAVRPRIERSIEQALNADVQSTREAR
Ga0316218_11182851	3300032117	Freshwater	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQVLNADVQSTR
Ga0316221_10573282	3300032665	Freshwater	MFDTLKRSEYKVVSIGALASAVRPRIERSIEQALNADVQSTREA
Ga0316224_11823911	3300032753	Freshwater	MFDTLKRSEYKVVSVGALASAVRPRIERSIEQVLNADVQTT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082037

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences