NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F082021

Metagenome / Metatranscriptome Family F082021

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F082021
Family Type Metagenome / Metatranscriptome
Number of Sequences 113
Average Sequence Length 46 residues
Representative Sequence VNSASAPNLAIRLKRGRANQPDSTFPQSPGIILETFDLNLLTAAVHL
Number of Associated Samples 75
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 94.50 %
% of genes near scaffold ends (potentially truncated) 96.46 %
% of genes from short scaffolds (< 2000 bps) 95.58 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (95.575 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland
(36.283 % of family members)
Environment Ontology (ENVO) Unclassified
(49.558 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(66.372 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 25.33%    β-sheet: 0.00%    Coil/Unstructured: 74.67%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.23
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF00155Aminotran_1_2 0.88



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A95.58 %
All OrganismsrootAll Organisms4.42 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003323|rootH1_10142041All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1248Open in IMG/M
3300004469|Ga0068931_1035067Not Available794Open in IMG/M
3300004472|Ga0068974_1388186Not Available755Open in IMG/M
3300004558|Ga0068979_1198018Not Available528Open in IMG/M
3300004560|Ga0068940_1214163Not Available783Open in IMG/M
3300004618|Ga0068963_1059951All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium814Open in IMG/M
3300005563|Ga0068855_100038392All Organisms → cellular organisms → Bacteria5690Open in IMG/M
3300009581|Ga0115600_1192043Not Available749Open in IMG/M
3300009587|Ga0115602_1257416Not Available741Open in IMG/M
3300010060|Ga0127425_126528Not Available567Open in IMG/M
3300010061|Ga0127462_137000Not Available741Open in IMG/M
3300010073|Ga0127429_135588Not Available756Open in IMG/M
3300010090|Ga0127471_1020364Not Available725Open in IMG/M
3300010101|Ga0127481_1030592Not Available810Open in IMG/M
3300010106|Ga0127472_1122168Not Available797Open in IMG/M
3300010108|Ga0127474_1026721Not Available720Open in IMG/M
3300010112|Ga0127458_1021353Not Available762Open in IMG/M
3300011024|Ga0138530_117046Not Available781Open in IMG/M
3300011046|Ga0138600_149932Not Available787Open in IMG/M
3300011053|Ga0138531_104739Not Available620Open in IMG/M
3300011075|Ga0138555_1000316Not Available750Open in IMG/M
3300011075|Ga0138555_1152649Not Available668Open in IMG/M
3300011340|Ga0151652_10876792Not Available576Open in IMG/M
3300012371|Ga0134022_1020338Not Available810Open in IMG/M
3300012373|Ga0134042_1201706Not Available570Open in IMG/M
3300012381|Ga0134026_1155371Not Available822Open in IMG/M
3300012385|Ga0134023_1126109Not Available782Open in IMG/M
3300012396|Ga0134057_1290292Not Available702Open in IMG/M
3300013078|Ga0153914_1119986Not Available737Open in IMG/M
3300013078|Ga0153914_1234208Not Available769Open in IMG/M
3300013080|Ga0153913_1081319Not Available803Open in IMG/M
3300013080|Ga0153913_1429789Not Available684Open in IMG/M
3300016702|Ga0181511_1270826Not Available797Open in IMG/M
3300016750|Ga0181505_10020156Not Available799Open in IMG/M
3300018058|Ga0187766_11391740Not Available514Open in IMG/M
3300019199|Ga0187789_1101247Not Available659Open in IMG/M
3300019199|Ga0187789_1132567Not Available683Open in IMG/M
3300019211|Ga0187799_1002953Not Available737Open in IMG/M
3300019211|Ga0187799_1033613Not Available701Open in IMG/M
3300019211|Ga0187799_1111205Not Available809Open in IMG/M
3300019211|Ga0187799_1191744Not Available695Open in IMG/M
3300019212|Ga0180106_1036712Not Available592Open in IMG/M
3300019233|Ga0184645_1262702Not Available521Open in IMG/M
3300019234|Ga0172288_1402225Not Available571Open in IMG/M
3300019245|Ga0187791_1025325Not Available501Open in IMG/M
3300019245|Ga0187791_1262969Not Available690Open in IMG/M
3300019245|Ga0187791_1275063Not Available806Open in IMG/M
3300019245|Ga0187791_1290909Not Available641Open in IMG/M
3300019245|Ga0187791_1303248All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium534Open in IMG/M
3300019245|Ga0187791_1315882Not Available522Open in IMG/M
3300019245|Ga0187791_1346980Not Available711Open in IMG/M
3300019245|Ga0187791_1363508Not Available750Open in IMG/M
3300019245|Ga0187791_1366064Not Available540Open in IMG/M
3300019246|Ga0172287_1002321Not Available735Open in IMG/M
3300019250|Ga0187790_1122743Not Available523Open in IMG/M
3300019250|Ga0187790_1280981Not Available649Open in IMG/M
3300019250|Ga0187790_1403100Not Available509Open in IMG/M
3300019250|Ga0187790_1449614Not Available662Open in IMG/M
3300019251|Ga0187795_1004858Not Available730Open in IMG/M
3300019251|Ga0187795_1153016Not Available708Open in IMG/M
3300019251|Ga0187795_1363325Not Available705Open in IMG/M
3300019252|Ga0172286_1278067Not Available779Open in IMG/M
3300019252|Ga0172286_1282141Not Available825Open in IMG/M
3300019254|Ga0184641_1335383Not Available817Open in IMG/M
3300019264|Ga0187796_1276350Not Available737Open in IMG/M
3300019264|Ga0187796_1354644Not Available501Open in IMG/M
3300019265|Ga0187792_1004312Not Available734Open in IMG/M
3300019265|Ga0187792_1020614All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium509Open in IMG/M
3300019265|Ga0187792_1090189Not Available823Open in IMG/M
3300019265|Ga0187792_1098860Not Available762Open in IMG/M
3300019265|Ga0187792_1171534Not Available813Open in IMG/M
3300019265|Ga0187792_1308813Not Available652Open in IMG/M
3300019265|Ga0187792_1327789Not Available528Open in IMG/M
3300019265|Ga0187792_1445320Not Available683Open in IMG/M
3300019265|Ga0187792_1483509Not Available788Open in IMG/M
3300019265|Ga0187792_1603355Not Available662Open in IMG/M
3300019265|Ga0187792_1644937Not Available727Open in IMG/M
3300019275|Ga0187798_1313970Not Available800Open in IMG/M
3300019275|Ga0187798_1405935Not Available658Open in IMG/M
3300019278|Ga0187800_1379222Not Available730Open in IMG/M
3300019284|Ga0187797_1092795Not Available724Open in IMG/M
3300019284|Ga0187797_1153373Not Available770Open in IMG/M
3300019284|Ga0187797_1472274Not Available514Open in IMG/M
3300020069|Ga0197907_11452228Not Available798Open in IMG/M
3300021315|Ga0179958_1007513Not Available767Open in IMG/M
3300021856|Ga0213850_1123666Not Available760Open in IMG/M
3300021857|Ga0213849_1229849Not Available799Open in IMG/M
3300021858|Ga0213852_1427145Not Available530Open in IMG/M
3300021858|Ga0213852_1550859Not Available757Open in IMG/M
3300021860|Ga0213851_1785969Not Available763Open in IMG/M
3300021861|Ga0213853_11113580Not Available532Open in IMG/M
3300021861|Ga0213853_11328166Not Available807Open in IMG/M
3300022185|Ga0079039_1429106Not Available759Open in IMG/M
3300022508|Ga0222728_1034804Not Available795Open in IMG/M
3300022531|Ga0242660_1093303Not Available726Open in IMG/M
3300022531|Ga0242660_1240650Not Available512Open in IMG/M
3300022533|Ga0242662_10108640Not Available799Open in IMG/M
3300022711|Ga0242674_1013097Not Available893Open in IMG/M
3300028450|Ga0189898_1013465Not Available813Open in IMG/M
3300030777|Ga0075402_10107836Not Available624Open in IMG/M
3300030841|Ga0075384_10054498Not Available598Open in IMG/M
3300030842|Ga0075404_10080928Not Available578Open in IMG/M
3300030884|Ga0265758_104193Not Available665Open in IMG/M
3300031057|Ga0170834_107261543Not Available570Open in IMG/M
3300031081|Ga0308185_1048254Not Available545Open in IMG/M
3300031128|Ga0170823_17685887Not Available587Open in IMG/M
3300031677|Ga0307480_1005540Not Available788Open in IMG/M
3300034480|Ga0314789_027250Not Available544Open in IMG/M
3300034670|Ga0314795_049188Not Available742Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland36.28%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil13.27%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil10.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.08%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds6.19%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland5.31%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands4.42%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.65%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.77%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.77%
WetlandEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland0.89%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.89%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.89%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.89%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.89%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003323Sugarcane root Sample H1Host-AssociatedOpen in IMG/M
3300004469Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 16 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004472Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004558Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 76 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004560Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 28 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004618Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 55 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300009581Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_9_15_A (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009587Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_9_15_C (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010060Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010061Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010073Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010090Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010101Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010106Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010108Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010112Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011024Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 8 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011043Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 6 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011046Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 68 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011053Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 9 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011075Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 36 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011340Combined Assembly of Wetland MetatranscriptomesEnvironmentalOpen in IMG/M
3300012224Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012371Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012373Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012381Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012385Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012390Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012396Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013078Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013080Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016702Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300019199Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019211Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019212Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT25_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019233Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019234Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019245Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019246Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019250Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019251Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019252Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019254Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019264Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019265Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019275Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019278Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019284Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021315Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021856Metatranscriptome of freshwater microbial communities from post-fracked creek in Pennsylvania, United States - LL:C (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021857Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - WE:C (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021858Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021860Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022185Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022508Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022711Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300028450Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300030777Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030841Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030842Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030884Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031081Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031097Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_183 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031677Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034480Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034670Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
rootH1_1014204113300003323Sugarcane Root And Bulk SoilNLAVRLKRGRANQPDSAFPQLPGIILETFGCDLLTATIHLSSFNELRTS*
Ga0068931_103506723300004469Peatlands SoilMARANVPEELVNSASSPNLAIRLQRNRANQPDPIFPQSPGIILETFNLNLLTAAVHL
Ga0068974_138818613300004472Peatlands SoilVNPASSPDLSARLQRGLANQPGSAFPQLPGIILEMSGFNL
Ga0068979_119801813300004558Peatlands SoilVNPASSPDLSARLQRGLANQPGSAFPQLPGIILETFDDNLLI
Ga0068940_121416313300004560Peatlands SoilVNPASSPDLSARLQRGLANQPGSAFPQLPGIILEMSGFNLLT
Ga0068963_105995113300004618Peatlands SoilVNSASAPDLAIRLERGRANQPDSAFPQSPGIIFEKSNFNLLTVAVLP
Ga0068855_10003839213300005563Corn RhizosphereSNLAIRLKRGRANQPDSAFPQLPGIILETSGFNLLTAAVHLSSFNELRTS*
Ga0115600_119204313300009581WetlandVPEELVNPASAPNLAVRFKRGLANQPDSTFPQPPGIILETFDCNLLTVAVHL
Ga0115602_125741613300009587WetlandVPEELVNPASAPNLAVRFKRGQANQPDSAFPQLPGIILETFDLNLTIAV
Ga0127425_12652813300010060Grasslands SoilVNPASTLKLALSLQRGLANQPDLTFPQSPGIILEVSGFNMLTAVV
Ga0127462_13700023300010061Grasslands SoilVNPASTLKLALSLQRGLANQPDLTFPQSPGIILEVSGFNLLTA
Ga0127429_13558823300010073Grasslands SoilVNPASTLKLALSLQRGLANQPDLTFPQSPGIILEVSGFNLLTAVVHF
Ga0127471_102036423300010090Grasslands SoilVNPASTLKLALSLQRGLANQPDLTFPQSPGIILEVSG
Ga0127481_103059213300010101Grasslands SoilVNPASTLKLALSLQRGLANQPDLTFPQSPGIILEVSGFNLLTADVH
Ga0127472_112216813300010106Grasslands SoilVNPASTLKLALSLQRGLANQPDLTFPQSPGIILEVSGFNLLTAV
Ga0127474_102672123300010108Grasslands SoilVNPASTLKLALSLQRGLANQPDLTFPQSPGIILEV
Ga0127458_102135313300010112Grasslands SoilVPPLPNLAIRLKRSRVNQPDSTFPQSPGIILEKFSFNLLIVAARL
Ga0138530_11704613300011024Peatlands SoilVNPASSPDLSARLQRGLANQPGSAFPQLPGIILEMSGFNLLTA
Ga0138528_14273513300011043Peatlands SoilVNPASAPPILRPALERGRTNQPGSTFPQSPGIILETCGLNLLTAAAYL
Ga0138600_14993213300011046Peatlands SoilVNPASSPDLSARLQRGLANQPGSAFPQLPGIILEMSGFNLLTAAV
Ga0138531_10473923300011053Peatlands SoilVNSASAPNLAIRLKRGRANQPDSTFPQSPGIILETFDLNLLTAAVHL
Ga0138555_100031613300011075Peatlands SoilVNSASATDLAIRLKRGPANQPDSTFPQSPGIILETFDLNLLTAAA
Ga0138555_115264913300011075Peatlands SoilVNSASAPNLAIRLKRGRANQPDSTFPQSPGIILETCSLNLLTAAAYL
Ga0151652_1087679213300011340WetlandVNPASAPNLSVRFKRGRVNQPDSTFAQSPGFILETSCCNLLTAAVYL
Ga0134028_123383823300012224Grasslands SoilVNPASAAKSYDSFERGQVNQPDSTFPRSPGIILGLS
Ga0134022_102033823300012371Grasslands SoilVNPASTLKLALSLQRGLANQPDLTFPQSPGIILEVSGFNLLTAVVH
Ga0134042_120170623300012373Grasslands SoilMNSASAAELRSGSKRGRANQPDSAFPQLPGIILETFGVNLLTATVHL
Ga0134026_115537113300012381Grasslands SoilVNPASTLKLALSLQRGLANQPDLTFPQSPGIILEVSGFNLLTAVVHFS
Ga0134023_112610913300012385Grasslands SoilVNPASTLTLALSLQRGLANQPDLPFPPSPGIILEVSGFNLLTA
Ga0134054_116053613300012390Grasslands SoilLPPLPKLALRLERGRANQPDSTFPQSPGIILETFNFNLLTVAA
Ga0134057_129029213300012396Grasslands SoilVNAASAPRAFQPAFERGRVNQPDPTFPQSPGIILEALSRSLLTIT
Ga0153914_111998613300013078Freshwater WetlandsVNSASAPNLAIRFKRGQVNQPDSTFPQSPGIILETFDFNLLIAAVHL
Ga0153914_123420813300013078Freshwater WetlandsVNPASAPNLAVRFMRGQANQPDSAFPQSPGIILETFDCNLLTVA
Ga0153913_108131913300013080Freshwater WetlandsVNSASAPNLAIRFKRGQVNQPDSTFPQSPGIILETFDFNLLIAAVHLS
Ga0153913_142978913300013080Freshwater WetlandsVNPASTPNLAARFMRGQANQPDSAFPQSPGIILETFDCNLLTVAVHLS
Ga0181511_127082623300016702PeatlandVNSASAPDLAIRLERGQVNQPDPAFAQSPGIILETFNLNLLTAAA
Ga0181505_1002015613300016750PeatlandVNSASAPDLAIRLERGQVNQPDPAFAQSPGIIFEKSSFNLLTVAVL
Ga0187766_1139174023300018058Tropical PeatlandVNSASTADLAICFKRGCVNQPDSTFPQTPGIILETFDFSLL
Ga0187789_110124713300019199PeatlandVNSASAPGLAIRLMRGQVNQPDSTFPQLPGIILETSGFNLLIAAVHL
Ga0187789_113256713300019199PeatlandVNAASAPNLTVRFKRGQVNQPDSTFPQSPGIILETSGFNLL
Ga0187799_100295313300019211PeatlandVNSASQPKLSIRLERGRANQPDSTFPQSPGIILETFGLSLLTAAANLS
Ga0187799_103361313300019211PeatlandVNSASAPNLAIRFRRGRVNQPDPTFPQLPGIILETFDFSLLTAAVHL
Ga0187799_111120513300019211PeatlandMLPLFPNLSIRFTRGRANQPGLAFSQLPGIILETSGFNLLTGAI
Ga0187799_119174413300019211PeatlandVNFASVPGLATRFKRGRANQPDSTFPRLPGIILETFGFSLLTAAIHL
Ga0180106_103671213300019212Groundwater SedimentVNSASAPNLAIRFKRGQVNQPDSAFPQLPGIILETFGFSLSTAAV
Ga0184645_126270213300019233Groundwater SedimentMNSASATNLAIRLKRGRANQPDSAFPQLPGIILETSGFNLLTAAVHL
Ga0172288_140222513300019234WetlandVNSASAPNLAIRFKRGQVNQPDSTFPQSPGSILETSGFNLLTAVV
Ga0187791_102532513300019245PeatlandVNPASAPNLAVRFKRGQANQPDSAFPQSPGIILETLDSNLLTVAV
Ga0187791_126296913300019245PeatlandVNSASAPDLAIRFQRGQVNQPDSTFAQLPGIILETFGFSLLTATVHL
Ga0187791_127506313300019245PeatlandVNSASAPNLAIQFTRGQANQPDSAFPQSPGIILETFGFSLLTAAVHLS
Ga0187791_129090913300019245PeatlandVNSASATNLAVRFKRGQVNQPDSTFPQSPGIILETFDFNLLTAAV
Ga0187791_130324813300019245PeatlandVNPASAPDLAMRFQRGRANQPGPTFPQLPGIILETFGRNLLTAAADL
Ga0187791_131588213300019245PeatlandVNSASTPDLATRFKRGRANQPDSTIPRLPGIILETFDFSLLTAVIDL
Ga0187791_134698013300019245PeatlandVNSASAPNLAIRLKRGQVNQPDPTFTQSPGIILETFGFSLLTAAVHLS
Ga0187791_136350813300019245PeatlandVNSASLPNYTIRFQRGRVNQPDSTFPQLPGIILETFDF
Ga0187791_136606413300019245PeatlandVNAASAPNLATRFTRGQANQPDSAFPQSPGIILETSGFNLLTAAIHL
Ga0172287_100232113300019246WetlandVNPASRPNLAARIKRGRANQPDPTFPQSPGIILETHDCNLSTTAAHPGS
Ga0187790_112274313300019250PeatlandVNCASTPDLAIRFKRGQANQPGSTFPQLPGIILETSGFNLLTAAVHF
Ga0187790_128098113300019250PeatlandVNSASATNLAVRFKRGQVNQPDSTFPQSPGIILETFDFNLLTAAVHL
Ga0187790_140310013300019250PeatlandVNSASTPDLAIRLPRGRVNQPDSTFPQSPGIILGTFDFNLLIAAND
Ga0187790_144961413300019250PeatlandVNAASAPNLATRFTRGQANQPDSAFHQSPGIILETSGFNLLTAAIHL
Ga0187795_100485813300019251PeatlandVNSASAPGLSIRVKRGRVNQPDPTFPQSPGIILETFDFNLLTAAV
Ga0187795_115301613300019251PeatlandVNSASQPKLSIRLERGRANQPDSTFPQSPGIILETFGLSLLTAAANL
Ga0187795_136332513300019251PeatlandVNSASAPDLAARFRRGRVNQPGSTFPQSPGIILETFDFSLLTAAIGL
Ga0172286_127806723300019252WetlandVNPASTPNLAARFMRGQANQPDSAFPQLPGIILETSSFNLLTAAVYL
Ga0172286_128214113300019252WetlandVSEELVNPASRPNLAARIKRGRANQPDPTFPQSPGIILETHDCNLSTTAAHPG
Ga0184641_133538313300019254Groundwater SedimentVNPASATEPFDRLKRGQANQPDSAFPQSLGIILEIFCNNLLTAAVHLS
Ga0187796_127635013300019264PeatlandVNSASAPGLSIRVKRGRVNQPDPTFPQSPGIILETFDFNLLTAAVRL
Ga0187796_135464413300019264PeatlandVNSASAPNLAIRFRRGRVNQPDPTFPQLPGIILETFDFSLLTAAV
Ga0187792_100431213300019265PeatlandVNSASAPNLAIQFTRGQANQPDSAFPQSPGIILETFGFSLLTAAVHL
Ga0187792_102061413300019265PeatlandVNPASAPDLAMRFQRGRANQPGPTFPQLPGIILETFSRNLLTAAADL
Ga0187792_109018913300019265PeatlandVNSASAPNLAIRFKRGCVNQPDSTFPQLPGIILESFGFSLLTAAVNLSS
Ga0187792_109886013300019265PeatlandVNSASAPELAVRLKRGRANQPGSTFPQLPGIILETSCVNLLIAA
Ga0187792_117153413300019265PeatlandMLPPAPPLTVRFQRGRANQPDSAFPQSPGIILEMSNHNLLTAAVP
Ga0187792_130881313300019265PeatlandVNRASNPGLSVRSQRGRANQPDSAFPQSPGIIHENFGINLLTAA
Ga0187792_132778913300019265PeatlandVARANVPEELVNYASLPDLSVRYRRGRANQPDSTFPQSPGIIHENFGLSLLTATVTR
Ga0187792_144532013300019265PeatlandVNSASAPNLAIRFKRGRVNQPDSTFPQLPGIILETFDFSLLTA
Ga0187792_148350913300019265PeatlandVNAASAPDLSIWFKRGRVNRPDPTFAQLPGIILEISGCNLLTAAVHL
Ga0187792_160335513300019265PeatlandVNSASAPDLAIRFQRGQVNQPDSTFAQLPGIILETFGF
Ga0187792_164493723300019265PeatlandVNSASAPDLAAGLKRGRINQPDSTFPQLPGIILETFGF
Ga0187798_131397013300019275PeatlandVNSASAPDLAIRFQRGRVNQPDSAFAQLPGIILESFGFSLLTAAVHL
Ga0187798_140593513300019275PeatlandVNPASSPNLAARLTRGQVNQPDSTFPQSSGIILEMFNLNLLTAAAHLSS
Ga0187800_137922213300019278PeatlandVNPASAPNLAARLTRGQVNQPDSTFPQSSGIILEMFNLNLLTAAAH
Ga0187797_109279513300019284PeatlandVNSASAPDLAIRFQRGRVNQPDSAFAQLPGIILETFGFSLLTAAVHL
Ga0187797_115337313300019284PeatlandVNPASSPNLAARLTRGQVNQPDSTFPQSSGIILEMFNLNLLTAAAHL
Ga0187797_147227413300019284PeatlandVNSASAPNLAIQFTRGQANQPDSAFPQSPGIILETFGFSLLTAAVPL
Ga0197907_1145222833300020069Corn, Switchgrass And Miscanthus RhizosphereVNSASAPNLAIRFKRGLVNQPDPAFPQSPGIILETSGFTLLNVTGHFC
Ga0179958_100751313300021315Vadose Zone SoilVNPASTLKLALSFQRGLANQPDLTFPQSPGIILEVSGFNLLTAVVHFSS
Ga0213850_112366613300021856WatershedsVNLASSPDLSARLQRGQANQPGSAFPQLPGIILEVSGFNLLTAAVHFSS
Ga0213849_122984913300021857WatershedsVNSASAPNLAIRFKRGQANQPGSTFPQSPGIILETFDLNRLTAAVRL
Ga0213852_142714513300021858WatershedsMPLPPNLAIRLQKGRANQPGSAFPQSPGIILETSGFNLLTATVHLS
Ga0213852_155085913300021858WatershedsVNLASSPDLSARLQRGQANQPGSAFPQLPGIILEVSGFNLLTAAVHFS
Ga0213851_178596913300021860WatershedsVNSASAPNLAIRLKRGRANQPDSTFPQSPGIILETSDLNLLTAAVHL
Ga0213853_1111358013300021861WatershedsMPLPPNLAIQLQKGRANQPGSAFPQSPGIILETSGFNLLTATVHLS
Ga0213853_1132816613300021861WatershedsVNLASSPDLSARLQRGQANQPGSAFPQLPGIILEVSGFNLLTAAVH
Ga0079039_142910613300022185Freshwater WetlandsMARATVPEELVNPASLPNLAARVERGRANQPDPTFPQSPGIILETHDCNLLTAA
Ga0222728_103480413300022508SoilVNTASPSNPAIRFQRGEANQPGSTFPQSPGIILETFSCNLLTAA
Ga0242660_109330313300022531SoilVNTASPSNPSIRFQRGEANQPGSTFPQSPGIILETFSCNLLTAAACP
Ga0242660_124065013300022531SoilMNSASIPNLAIRLKRGRANLPDSAFPQSPGILLETSGFNLLTASIHL
Ga0242662_1010864013300022533SoilVNTASPSNPSIRFQRGEANQPGSTFPQSPGIILETFSCNLLTAA
Ga0242674_101309713300022711SoilMNSASIPNLAIRLKRGRANQPDSAFPQLPGIILETFGFNLLTAAFHL
Ga0189898_101346513300028450Peatlands SoilVNPASSPDLSARLQRGLANQPGSAFPQLPGIILEMSGFNLLTAAVHFS
Ga0075402_1010783613300030777SoilMNSASRSDLAIRRKRGRANQPDSAFPQLPGIILETSGFNLLTAA
Ga0075384_1005449813300030841SoilMNSASRSNLAIRLKRGRANQPDSAFPQLPGIILET
Ga0075404_1008092813300030842SoilMNSASAPNLAIRFKRGRANQPDSAFPQLPGIILETSGFNLLTAAVHLSSF
Ga0265758_10419313300030884SoilMNSASIPNLAIRLKRGRANQPDSAFPQSPGIILETSGFNLLTASIHL
Ga0170834_10726154313300031057Forest SoilMNSASAPNLAIRFKRGRANQPDSAFPQLPGIILETSGFNLLTAAVHL
Ga0308185_104825413300031081SoilMNSASATNLAIRLKRGRANQPDSAFPQLPGIILETSGF
Ga0308188_100942513300031097SoilLCLVARKLASPVSRDRANQPDQIFPQLPGIILETFNLNLLTAAAHL
Ga0170823_1768588713300031128Forest SoilMNSASAPNLAIRFKRGRANQPDSAFPQLPGIILETSGFNLLTAAVHLSSFNEL
Ga0307480_100554013300031677Hardwood Forest SoilVNTASSPDLTILLQRGQANQPDSTFPQSPGIILETSYFNLLTDAV
Ga0314789_027250_1_1503300034480SoilMNPASSTELAPCFQRGRVNQPDPAFPQSPGIILETSGYILLRLPPSVSVL
Ga0314795_049188_3_1433300034670SoilMNFASSANLAIRFQRGQANQPDSTFPQSPGIILETSDFNLLTAAVDL


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