Metagenome / Metatranscriptome Family F082016

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082016
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	74 residues
Representative Sequence	MQSKWLVKSATSIALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAK
Number of Associated Samples	91
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.15 %
% of genes near scaffold ends (potentially truncated)	93.81 %
% of genes from short scaffolds (< 2000 bps)	84.96 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.690 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (38.938 % of family members)
Environment Ontology (ENVO)	Unclassified (37.168 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (44.248 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 58.42% β-sheet: 0.00% Coil/Unstructured: 41.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF03135	CagE_TrbE_VirB	9.73
PF05101	VirB3	4.42
PF00436	SSB	0.88
PF13340	DUF4096	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3451	Type IV secretory pathway, VirB4 component	Intracellular trafficking, secretion, and vesicular transport [U]	9.73
COG3702	Type IV secretory pathway, VirB3 component	Intracellular trafficking, secretion, and vesicular transport [U]	4.42
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.88
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.58 %
Unclassified	root	N/A	4.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.69 %
Unclassified	root	N/A	4.42 %
Viruses	superkingdom	All Organisms → Viruses	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.69 %
Unclassified	root	N/A	4.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.96 %
Unclassified	root	N/A	4.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	84.07 %
Unclassified	root	N/A	4.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	84.07 %
Unclassified	root	N/A	4.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	84.07 %
Unclassified	root	N/A	4.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009629\|Ga0116119_1182312	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	523	Open in IMG/M
3300009787\|Ga0116226_10427557	All Organisms → cellular organisms → Bacteria → Proteobacteria	1348	Open in IMG/M
3300010341\|Ga0074045_10324313	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1007	Open in IMG/M
3300013105\|Ga0157369_10566185	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1174	Open in IMG/M
3300014152\|Ga0181533_1161328	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	904	Open in IMG/M
3300014155\|Ga0181524_10275151	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	779	Open in IMG/M
3300014161\|Ga0181529_10141202	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1477	Open in IMG/M
3300014161\|Ga0181529_10343577	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	820	Open in IMG/M
3300014164\|Ga0181532_10218217	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1109	Open in IMG/M
3300014165\|Ga0181523_10642107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	582	Open in IMG/M
3300014169\|Ga0181531_10488173	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	760	Open in IMG/M
3300014491\|Ga0182014_10059884	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2531	Open in IMG/M
3300014492\|Ga0182013_10370813	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	777	Open in IMG/M
3300014493\|Ga0182016_10490351	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	712	Open in IMG/M
3300014499\|Ga0182012_11038274	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	514	Open in IMG/M
3300016728\|Ga0181500_1096992	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	515	Open in IMG/M
3300016750\|Ga0181505_10539325	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300017931\|Ga0187877_1390161	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	526	Open in IMG/M
3300017988\|Ga0181520_10333870	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1122	Open in IMG/M
3300017988\|Ga0181520_10357437	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1073	Open in IMG/M
3300017988\|Ga0181520_10557173	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	802	Open in IMG/M
3300017988\|Ga0181520_10722235	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	678	Open in IMG/M
3300018019\|Ga0187874_10410155	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	546	Open in IMG/M
3300018020\|Ga0187861_10132754	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1165	Open in IMG/M
3300018038\|Ga0187855_10709627	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	586	Open in IMG/M
3300018043\|Ga0187887_10407620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	802	Open in IMG/M
3300018046\|Ga0187851_10209017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1156	Open in IMG/M
3300018046\|Ga0187851_10212625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1144	Open in IMG/M
3300018046\|Ga0187851_10419661	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	764	Open in IMG/M
3300019787\|Ga0182031_1116504	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	674	Open in IMG/M
3300019787\|Ga0182031_1125570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1012	Open in IMG/M
3300022872\|Ga0224526_1004920	All Organisms → cellular organisms → Bacteria	3749	Open in IMG/M
3300023068\|Ga0224554_1112459	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	618	Open in IMG/M
3300023101\|Ga0224557_1172406	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	777	Open in IMG/M
3300025444\|Ga0208189_1064218	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	677	Open in IMG/M
3300025473\|Ga0208190_1038127	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1048	Open in IMG/M
3300027860\|Ga0209611_10281065	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	984	Open in IMG/M
3300028082\|Ga0255352_1002350	All Organisms → cellular organisms → Bacteria → Acidobacteria	8078	Open in IMG/M
3300028084\|Ga0255356_1030778	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1154	Open in IMG/M
3300028087\|Ga0255354_1092659	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	540	Open in IMG/M
3300028566\|Ga0302147_10001811	All Organisms → cellular organisms → Bacteria	9369	Open in IMG/M
3300028566\|Ga0302147_10013458	All Organisms → cellular organisms → Bacteria	3059	Open in IMG/M
3300028566\|Ga0302147_10022955	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2276	Open in IMG/M
3300028574\|Ga0302153_10251422	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	605	Open in IMG/M
3300028766\|Ga0302269_1042402	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1437	Open in IMG/M
3300028866\|Ga0302278_10463584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	546	Open in IMG/M
3300028873\|Ga0302197_10134160	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1208	Open in IMG/M
3300028909\|Ga0302200_10028798	All Organisms → cellular organisms → Bacteria	3455	Open in IMG/M
3300029636\|Ga0222749_10495072	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	660	Open in IMG/M
3300029883\|Ga0311327_10151308	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1641	Open in IMG/M
3300029907\|Ga0311329_10286579	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1204	Open in IMG/M
3300029911\|Ga0311361_10951137	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	728	Open in IMG/M
3300029911\|Ga0311361_11515846	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	504	Open in IMG/M
3300029915\|Ga0311358_10442399	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1034	Open in IMG/M
3300029919\|Ga0302141_1153105	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	624	Open in IMG/M
3300029920\|Ga0302142_1251264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	534	Open in IMG/M
3300029920\|Ga0302142_1272199	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	510	Open in IMG/M
3300029922\|Ga0311363_11177364	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	649	Open in IMG/M
3300029922\|Ga0311363_11224578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	630	Open in IMG/M
3300029951\|Ga0311371_11674654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	696	Open in IMG/M
3300029952\|Ga0311346_10899258	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	730	Open in IMG/M
3300029953\|Ga0311343_10109417	All Organisms → cellular organisms → Bacteria	3143	Open in IMG/M
3300029953\|Ga0311343_10443841	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1176	Open in IMG/M
3300029953\|Ga0311343_10560993	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	993	Open in IMG/M
3300029953\|Ga0311343_10805864	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	765	Open in IMG/M
3300029955\|Ga0311342_10428498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1136	Open in IMG/M
3300029955\|Ga0311342_10997566	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	622	Open in IMG/M
3300029955\|Ga0311342_10997790	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	621	Open in IMG/M
3300029956\|Ga0302150_10036109	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1944	Open in IMG/M
3300029982\|Ga0302277_1335806	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	543	Open in IMG/M
3300029984\|Ga0311332_10540809	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	917	Open in IMG/M
3300029986\|Ga0302188_10455234	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	521	Open in IMG/M
3300029988\|Ga0302190_10078640	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1523	Open in IMG/M
3300029993\|Ga0302304_10169651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	817	Open in IMG/M
3300030000\|Ga0311337_10146051	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1914	Open in IMG/M
3300030004\|Ga0302186_10154859	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300030013\|Ga0302178_10161301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1103	Open in IMG/M
3300030020\|Ga0311344_10223199	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1903	Open in IMG/M
3300030045\|Ga0302282_1014210	All Organisms → cellular organisms → Bacteria	4445	Open in IMG/M
3300030051\|Ga0302195_10181053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	985	Open in IMG/M
3300030053\|Ga0302177_10507942	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	622	Open in IMG/M
3300030503\|Ga0311370_11092051	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	878	Open in IMG/M
3300030506\|Ga0302194_10071225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1621	Open in IMG/M
3300030506\|Ga0302194_10078462	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1521	Open in IMG/M
3300030506\|Ga0302194_10350094	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	580	Open in IMG/M
3300030518\|Ga0302275_10426604	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	685	Open in IMG/M
3300030519\|Ga0302193_10038865	All Organisms → cellular organisms → Bacteria	3214	Open in IMG/M
3300030519\|Ga0302193_10221221	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1043	Open in IMG/M
3300030519\|Ga0302193_10335363	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	785	Open in IMG/M
3300030520\|Ga0311372_11500898	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	831	Open in IMG/M
3300030580\|Ga0311355_11275777	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	645	Open in IMG/M
3300031236\|Ga0302324_102770470	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	591	Open in IMG/M
3300031258\|Ga0302318_10115233	All Organisms → Viruses → Predicted Viral	1219	Open in IMG/M
3300031259\|Ga0302187_10123387	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1441	Open in IMG/M
3300031261\|Ga0302140_11189237	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	510	Open in IMG/M
3300031344\|Ga0265316_10906362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	616	Open in IMG/M
3300031712\|Ga0265342_10368486	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	746	Open in IMG/M
3300031726\|Ga0302321_101758013	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	718	Open in IMG/M
3300031813\|Ga0316217_10034643	All Organisms → cellular organisms → Bacteria	2995	Open in IMG/M
3300031823\|Ga0307478_11253416	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	617	Open in IMG/M
3300031837\|Ga0302315_10441197	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	717	Open in IMG/M
3300032605\|Ga0316232_1191041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	830	Open in IMG/M
3300032897\|Ga0335071_11550533	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	607	Open in IMG/M
3300033134\|Ga0335073_10737068	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1070	Open in IMG/M
3300033402\|Ga0326728_10477686	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1023	Open in IMG/M
3300033405\|Ga0326727_10165884	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2542	Open in IMG/M
3300033983\|Ga0371488_0125367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1380	Open in IMG/M
3300034065\|Ga0334827_069478	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1234	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.58%
Host-Associated	Host-Associated	4.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.68%
Aquatic	Environmental → Aquatic	23.89%
Plants	Host-Associated → Plants	4.42%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	61.95%
Freshwater	Environmental → Aquatic → Freshwater	23.89%
Soil	Environmental → Terrestrial → Soil	9.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.65%
Peat Moss	Host-Associated → Plants → Peat Moss	1.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	61.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.96%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.77%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	61.95%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	19.47%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.31%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.65%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	38.94%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	9.73%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.96%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	6.19%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	6.19%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	5.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.65%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.65%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	1.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.77%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300016728	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022872	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300028082	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T0	Environmental	Open in IMG/M
3300028084	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T100	Environmental	Open in IMG/M
3300028087	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T50	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028766	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029919	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2	Environmental	Open in IMG/M
3300029920	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_3	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029986	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030004	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_1	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300032605	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116119_11823122	3300009629	Peatland	MQCKWLAKSATAIALVAVMATETVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEKQVMMVENQLTQI
Ga0116226_104275572	3300009787	Host-Associated	MQPKWLAKSATAIALVAVMATETVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEKQVMMVENQLRACY*
Ga0074045_103243132	3300010341	Bog Forest Soil	MQPKWPAKSATAIALVAVMATEIVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEK
Ga0157369_105661851	3300013105	Corn Rhizosphere	MIAVMGTATICPPPAHAGVPGVFATEYTQLLNYAELVGQLEKQVSMVENQLIQISDMTKHGITISDQLFGTVASDIANLRQIVNTGQ
Ga0181533_11613282	3300014152	Bog	MQSKWLAKSVTAVVLVALMAAETVNPVPAYAGVPGVFATEFTQIMNYVELAGQLEQQVLMVENQLTQI
Ga0181524_102751512	3300014155	Bog	MQCKWLAKSATAIVLVALMAAETVNPVPAYAGVPGVLATEFTQILNYVELAGQLEQQVLMVENQLSQLMDMA
Ga0181529_101412022	3300014161	Bog	MQSKWLAKSVTAIVLVALMAAETVNPVPAYAGVPGVFATEFTQIMNYVELAGQLEQQVLMVENQLTQIENQI
Ga0181529_103435772	3300014161	Bog	MQSKWLAKSATAIVLVALMATETVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEKQVLMV*
Ga0181532_102182172	3300014164	Bog	MQSKWLVKSATSIALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLTDMAKHGITITDQLFGTVA
Ga0181523_106421071	3300014165	Bog	MQSKWLVKSATSIALVAIMAVETVCPEPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGIT
Ga0181531_104881731	3300014169	Bog	MQSKWLAKSATAIVLVALMTAETVNPVPAYAGVPGMFATEFTQIFNYIELAGQLEKQVLMVENQLNQLADMAKHGVTI
Ga0182014_100598841	3300014491	Bog	MAVETVCPVPAHAGVPGLFATEYTQILNYVELAGHLEKQVVMVENQLNQLADMAKHGITITDQLFGTVASDITTLRQIVNTGQALSYT
Ga0182013_103708132	3300014492	Bog	MQTKWLAKSVTAVALVALMAAETINPVSAYAGVPGVFATEYTQILNYLQLIGSLEKQVLMVENQLTQIANEVKHGLTIPN
Ga0182016_104903511	3300014493	Bog	MQSKWLAKSATAIALIAVMATETANPVPAYAGVPGIFATEYTQILNYLQLIGSLEKQVMMVENQLTQIADMAKHGVT
Ga0182012_110382742	3300014499	Bog	MQRKWFVKSATAAILVGVMAAETVNPVPAHAGVPGVFATEYTQLLNYAELAGQLEKQVLMVE
Ga0181500_10969922	3300016728	Peatland	MQSKWLVKSATSIALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAK
Ga0181505_105393252	3300016750	Peatland	MQSKWLVKSATSIALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGITITDQLFGTVASDITTLRQIVNTGQALSYTLSNMDGTFR
Ga0187877_13901612	3300017931	Peatland	MQSKWLVKSATSIALVAIMAVETVCPAPAHAGVPGLFATEFTQLLNYVELAGQLEQQVLMVENQLNQLL
Ga0181520_103338702	3300017988	Bog	MQSKWLVKSATSMALVAIMAAETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGIT
Ga0181520_103574372	3300017988	Bog	MQSKWLVRSATSIALVAIMAVETVRPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGIT
Ga0181520_105571731	3300017988	Bog	MKSKWLVKSATSIALVAIMAIETICPVPAHAGVPGVFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGITITDQLFG
Ga0181520_107222351	3300017988	Bog	MQSKWLAKSVTAVVLVAVMAAETVNPVPAYAGVPGVFATEYTQILNYLQLIGSLEKQVLMVENQLTQIANE
Ga0187874_104101552	3300018019	Peatland	MQSKWLVRSATSIALVAMMAVETVCPAPAHAGVPGLFATEFTQLLNYVELAGQLEQQVLMVENQLNQLLDMAKHGITITD
Ga0187861_101327541	3300018020	Peatland	MQSKWLAKSVTAVVLVALMAAETVNPVPAYAGVPGVFATEFTQIMNYVELAGQLEQQVLMVENQ
Ga0187889_103969312	3300018023	Peatland	MQSKWLAKSVTAVVLVALMAAETVNPVPAYAGVPGVFATEFTQIMNYVELAGQLEQ
Ga0187855_107096271	3300018038	Peatland	MQSKWLVKSATSIALVAMMAVETVCPAPAHAGVPGLFATEFTQLLNYVELAGQLEQQVLMVENQLNQLLDMAKHGITITDQ
Ga0187887_104076202	3300018043	Peatland	MQSKWLVRSATSVALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGITITDQLFGTVAS
Ga0187851_102090172	3300018046	Peatland	MQSKWLVRSATSIALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGITITDQLFGTV
Ga0187851_102126251	3300018046	Peatland	MQPKWLAKSATAIALVAVMATETVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEKQVMM
Ga0187851_104196612	3300018046	Peatland	MQSKWLVRSATSIALVAIMAVETVCPAPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGITITDQLFGTV
Ga0182031_11165042	3300019787	Bog	MKHRWLVKSATSIALVSIMAIETVCPAPAHAGVPGLFATEFTQLLNYVELAGQLEQQVLMVENQLNQLLDMAKH
Ga0182031_11255702	3300019787	Bog	MKHRWLVKSATSIALVSIMAIETVCPAPAHAGVPGLFATEFTQLLNYVELAGQLEQQVLMVENQ
Ga0224526_10049201	3300022872	Soil	MKSKWLVKSATSIALVAIMAVETVCPVPAHAGVPGVFATEYTQILNYVELAGQLEKQVVMVENQLNH
Ga0224554_11124591	3300023068	Soil	MQTKWLAKSVTAVVLVAVMAAETVNPVPAYAGVPGVFATEYTQILNYLQLIGSLEKQVLMVENQLTQIANEV
Ga0224557_11724062	3300023101	Soil	MQSKWLVRSATSIALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGITITDQLFGTVASDITTLRQIVNTGQALSYTLSN
Ga0208189_10642182	3300025444	Peatland	MQTKWLAKSATAIALVAVMATETINPVPAYAGVPGVFATEFTQILNYVELAGQLEQQVLMVENQLTQIT
Ga0208190_10381272	3300025473	Peatland	MQSKWLAKSVTAVVLVAVMAAETVNPVPAYAGVPGVFATEYTQILNYLQLIGSLEKQVMMVENQLT
Ga0209611_102810652	3300027860	Host-Associated	MQSRWLARSASAVALVAVMATETLNPASAHAGVPGVFATEYTQLLNYAELAAQLEKHVMMVENQL
Ga0255352_10023509	3300028082	Soil	MQSKWLVRSATSIALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQIADMAKHGITITDQLFG
Ga0255356_10307781	3300028084	Soil	MQPKWLAKSATAIVLVGLMAIGTVNPVPAYAGVPGVFATEYTQLLNYVELAGQLEKQVLM
Ga0255354_10926592	3300028087	Soil	MKSKWLVKSATSIALVAIMAVETVCPAPAHAGVPGVFATEYTQILNYVELAGQLEKQVV
Ga0302151_100578741	3300028562	Bog	MQSKWLVRSATSVALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQL
Ga0302147_100018111	3300028566	Bog	MQCKWLAKSATAIVMVALMAAETVNPVPAYAGVPGVFATEYTQILNYLQLIGSLEKQVLMVENQLTQIAD
Ga0302147_100134581	3300028566	Bog	MQSKWLVRSATSIALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQIAD
Ga0302147_100229551	3300028566	Bog	MQSKWLAKSATAIVLVALMATETVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEKQVLMVENQLTQ
Ga0302153_102514222	3300028574	Bog	MQSKWLVKSASALALVAVMATETMSPIPAYAGVPGVFATEYTQLLNYAELAGQLEKQVLMVENQLNQLADMAKHG
Ga0302269_10424022	3300028766	Bog	MQPKWLAKSATAIVLVALMAAETVNPVPAYAGVPGVFATEYTQILNYLQLIGSLEKQ
Ga0302278_104635842	3300028866	Bog	MQTKWLAKSATAVVLVAVIAAETLSPVPAHAGVPGVFATEYTQILNYVELAGQLEKQVLMVENQLNQLADMAKHGITITDQLFGTVASDINNLNQIVKTGESLS
Ga0302197_101341602	3300028873	Bog	MQSKWLAKSATAIVLVALMATETVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEKQVLMVEN
Ga0302200_100287981	3300028909	Bog	MKSKWLVKSATSIALVAIMAVETVCPVPAHAGVPGVFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGITITDQLFGTVA
Ga0222749_104950722	3300029636	Soil	MGSNSQVRRGAAIAMVLVFATATVSPPPVRAGVPGVFATEYTQLLNYAQLVGQLEKQVMMVENQLNMIAN
Ga0311327_101513082	3300029883	Bog	MQSKWLVRSATSIALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQ
Ga0311329_102865791	3300029907	Bog	MQSKWLVKSASALALVAVMATETMSPIPAYAGVPGVFATEYTQLLNYAELAGQLEKQVLMVENQLNQLA
Ga0311361_109511372	3300029911	Bog	MKSKWLVKSATSIALVAIMAVETVCPVPAHAGVPGVFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGITITDQLFGT
Ga0311361_115158461	3300029911	Bog	MQSKWLAKSATAIVLVALMATETVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEKQVLMVENQLTQIADM
Ga0311358_104423992	3300029915	Bog	MQPKWLAKSATAIALVAVMATETVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEKQVMMVENQLTQI
Ga0302141_11531051	3300029919	Bog	MQFKWLAKSATAIVLVALMASETVNPDPAYAGVPGLFATEYTQILNYLQLIGSLEKQVMMVENQL
Ga0302142_12512641	3300029920	Bog	MQSKWLVKSASALALVAVMATETMSPIPAYAGVPGVFATEYTQLLNYAELAGQLEKQVLMVENQLNQLADMAKHGITITNQLFGTVASDI
Ga0302142_12721991	3300029920	Bog	MQSKWLAKSATAIVLVALMAAETVNPVPVYAGVPGVFATEYTQLLNYAELAGQLEKQVLMVENQLNQLADMAKHGVTITNQIFG
Ga0311363_111773642	3300029922	Fen	MQCKWLVKSATATVLVALMAAETINPAPAYAGVPGVFATEYTQVLNYLQLIGSLEKQ
Ga0311363_112245782	3300029922	Fen	MQPKWLVKGATAIVLVALMATETVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEKQVLMVENQ
Ga0311328_108748592	3300029939	Bog	MKSKWLVKSATSIALVAIMAIETICPVPAHAGVPGVFATEYTQILNYVELAGQL
Ga0311371_116746541	3300029951	Palsa	MQSKWLAKSATAFALVALMATETMSPIPAYAGVPGVFATEYTQLLNYTELAGQLEKQVLMVENQLNQLADMAKHGITITNQLFGTVASDINNL
Ga0311346_108992581	3300029952	Bog	MQCKWLAKSTTAIVLVAVMATETVKPAPAYAGVPGVFATEYTQLLNYLQLVGSLEKQVLMVEN
Ga0311343_101094171	3300029953	Bog	MQTKWLAKSATAVVLVAVIAAETLSPVPAHAGVPGVFATEYTQILNYVELAGQLEKQVLMVENQLNQLADMAKHGITITDQLFGTVASDINNLNQI
Ga0311343_104438411	3300029953	Bog	MQCKWLAKSATAIVMVALMAAETVNPVPAYAGVTGVFATEYTQILNYLQLIGSLEKQVL
Ga0311343_105609931	3300029953	Bog	MKSKWLVKSATSIALVAIMAVETVCPAPAHAGVPGVFATEYTQILNYVELAGQLEKQVVMVENQLNQLA
Ga0311343_108058641	3300029953	Bog	MQYKWLAKSATAIVLVAVMATETVNPAPAYAGVPGLFATEYTQILNYLQLIGSLEKQVMMVENQLTQI
Ga0311342_104284981	3300029955	Bog	MQSKWLVRSATSVALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGITITDQLFGTVASDI
Ga0311342_109975662	3300029955	Bog	MQPKWLAKSATAIVLVALMATETVNPVPAYAGVPGVFATEYTQILNYLQLIGSLEKQ
Ga0311342_109977902	3300029955	Bog	MQPKWLVKGATAIVLVALMATETVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEKQVL
Ga0302150_100361091	3300029956	Bog	MQTKWLAKSATAVVLVAVIAAETLSPVPAHAGVPGVFATEYTQILNYVELAGQLEKQVLMVENQLNQLADMAKHGITITDQLFGTVASDINNL
Ga0302277_13358061	3300029982	Bog	MKSKWLVKSATSIALVAIMAVETVCPVPAHAGVPGVFATEYTQILNYVELAGQLEKQVVMVENQLNQL
Ga0311332_105408092	3300029984	Fen	MQCKWLAKSATAIVLVTLMAAETVNPVPAYAGVPGVFATEYTQILNYLQLIGSLEKQVLMVENQLTQIANEVKHGLTIPNQLF
Ga0302188_104552342	3300029986	Bog	MKSKWLVKSATSIALVAIMAVETVCPVPAHAGVPGVFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGITITDQLFGTVASD
Ga0302190_100786402	3300029988	Bog	MQSKWLVRSATSIALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQIADMAKHGITITDQLFGTVASDI
Ga0302304_101696511	3300029993	Palsa	MQPKWLAKSATAIVLVALMATETVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEKQ
Ga0311337_101460511	3300030000	Fen	MQCKWLAKSATAIVLVTLMAAETVNPVPAYAGVPGVFATEYTQILNYLQLIGSLEKQVLMVENQLTQIANEVK
Ga0302186_101548592	3300030004	Bog	MQSKWLVKSASALALVAVMATETMSPIPAYAGVPGVFATEYTQLLNYAELAGQLEKQVLMVENQLNQLADMAKHGITITNQLFGTVASDINNLNQIVKTGQSLSYTIFLVH
Ga0302178_101613012	3300030013	Palsa	MQPRWLAKSATAIVLVALMSTETVNPVPAYAGVPGVFATEYTQILNYLQLIGSLEKQVLMVENQLTQIAD
Ga0311344_102231992	3300030020	Bog	MKSKWLVKSATSIALVAIMAVETVCPVPAHAGVPGVFATEYTQILNYVELAGQLEKQVVMVENQLN
Ga0302282_10142101	3300030045	Fen	MKSKWLVKSATSIALVAIMAVETVCPVPAHAGVPGVFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMA
Ga0302195_101810531	3300030051	Bog	MKSKWLVKSATSIALVAIMAVETVCPAPAHAGVPGVFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGITITDQLFGTVASDI
Ga0302177_105079421	3300030053	Palsa	MQPRWLAKSATAIVLVALMSTETVNPVPAYAGVPGVFATEYTQILNYLQLIGSLEKQVLMVE
Ga0311370_110920511	3300030503	Palsa	MQPKWLAKSATAIVLVALMATETVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEKQVLMVENQL
Ga0302194_100712251	3300030506	Bog	MQSKWLVRSATSIALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGITITDQLFGTVASDITTLRQIVNTGQALSYT
Ga0302194_100784621	3300030506	Bog	MQSKWLVRSATSIALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGISITDQLFGTVASDIT
Ga0302194_103500942	3300030506	Bog	MKSKWLVKSATSIALVAIMAVETVCPVPAHAGVPGVFATEYTQILNYVELAGQLEKQV
Ga0302275_104266041	3300030518	Bog	MQSKWLAKSATAIVLVALMAAETVNPVPAYAGVPGLFATEYTQILNYLQLIGSLEKQVMMVE
Ga0302193_100388653	3300030519	Bog	MQSKWLVKSASALALVAVMATETMSPIPAYAGVPGVFATEYTQLLNYAELAGQLEKQVLMVENQLNQLADMAKHGITITNQLFGTVASDINNLNQIVKTGQSLS
Ga0302193_102212212	3300030519	Bog	MQPKWLAKSATAIALVALMATETVNPVPAYAGVPGVFATEFTQLLNYIELVGQLEQQALMVENQLA
Ga0302193_103353631	3300030519	Bog	MQPKWLAKSATAIALVAVMATETVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEKQVM
Ga0311372_115008982	3300030520	Palsa	MMSKWLAKGTSAVAMVALMATVTINPPAAHAGIPGLFATEITQLLNYVELVGSLEQQVLQVENQITQIADMAKHGITITDQLFGTVGSDISNLR
Ga0311355_112757772	3300030580	Palsa	MMSKWLAKGTSAVAMVALMATVTINPPAAHAGIPGLFATEITQLLNYVELVGSLEQQVLQVENQITQIADMAKHGITITDQLFGTVG
Ga0302324_1027704701	3300031236	Palsa	MMSKWLAKGTSAVAMVALMATVTINPPAAHAGIPGLFATEITQLLNYVELVGSLEQQVLQVENQITQIADMAKHGITITDQLFGTVGS
Ga0302318_101152331	3300031258	Bog	MQPKWLAKSATAIVLVALMAAETVNPVPAYAGVPGVFATEYTQILNYLQLIGSLEKQVLMVENQLTQIA
Ga0302187_101233871	3300031259	Bog	MQPKWLAKSATAIVLVALMATETVNPVPAYAGVPGVFATEFTQLLNYIELVGQLEQQALMVENQLAQIANQVKHGL
Ga0302140_102010762	3300031261	Bog	MKHRWLVKSATSIALVSIMAIETVCPAPAHAGVPGLFATEFTQLLNYVELAGQL
Ga0302140_111892372	3300031261	Bog	MQSKWLVKSASALALVAVMATETMSPIPAYAGVPGVFATEYTQLLNYAELAGQLEKQVLM
Ga0265316_109063622	3300031344	Rhizosphere	MQPKWLAKSATAIALVAVMATETVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEK
Ga0265342_103684862	3300031712	Rhizosphere	MQPKWLAKSATAIALVAVMATETVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEKQVMMVENQLTQ
Ga0302321_1017580131	3300031726	Fen	MQPKWLAKSATAIALVAVMATETVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEKQVMMVENQLTQIAD
Ga0316217_100346431	3300031813	Freshwater	MQSKWLVKSATSMALVAIMAAETVCPVSAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGITITDQLFGTVASDIT
Ga0307478_112534162	3300031823	Hardwood Forest Soil	MGSNSPARRGAVVAIALVFATTTVSPPPAHAGVPGVFATEYTQLLNYAQLVGQLEKQVMMVENQLNMIANMERNGLTITNQLFGTVVTDI
Ga0302315_104411972	3300031837	Palsa	MQPKWLAKSATAIVLVALMATETVNPVPAYAGVPGVFATEFTQLLNYIELVGQLEQQA
Ga0311367_118658382	3300031918	Fen	MKSKWLVKSATSIALVAIMAVETVCPAPAHAGVPGVFATEYTQILNYVELAGQLE
Ga0316232_11910411	3300032605	Freshwater	MQSKWLVRSATSIALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVV
Ga0335071_115505332	3300032897	Soil	MQSKWLVKSATSIALVAIMAVETVCPAPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGITITDQLF
Ga0335073_107370682	3300033134	Soil	MKSKWLVKSATSIALVSIMAAETISPEPAHAGVPGLFATEYTQILNYVELVGQLEQQVLMVENQLNQLADMAKHGITITDQLFGT
Ga0326728_104776861	3300033402	Peat Soil	MQSKWLVRSATSIALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGITITDQLFGTVA
Ga0326727_101658842	3300033405	Peat Soil	MKHRWLVKSATSIALVSIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHG
Ga0371488_0125367_1_252	3300033983	Peat Soil	MQSKWLVRSATSIALVAIMAVETVCPVPAHAGVPGLFATEYTQILNYVELAGQLEKQVVMVENQLNQLADMAKHGITITDQLFG
Ga0334827_069478_1_189	3300034065	Soil	MQPKWLAKSATAIALVAVMATETVNPVPAYAGVPGIFATEYTQILNYLQLIGSLEKQVMMVEN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082016

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences