Metagenome Family F082011

Overview

Basic Information

• Family ID: F082011
• Family Type: Metagenome
• Number of Sequences: 113
• Average Sequence Length: 51 residues
• Representative Sequence: MALARASDDPALKQYYEELALGFVQKAGNEHDPDNTAALLATINPDSGNTNRRGR
• Number of Associated Samples: 63
• Number of Associated Scaffolds: 113

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 19.09 %
• % of genes near scaffold ends (potentially truncated): 30.97 %
• % of genes from short scaffolds (< 2000 bps): 89.38 %
• Associated GOLD sequencing projects: 54
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (76.106 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.203 % of family members)
• Environment Ontology (ENVO): Unclassified (53.982 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (74.336 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 39.76%
  β-sheet: 0.00%
  Coil/Unstructured: 60.24%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13924	Lipocalin_5	2.65
PF13545	HTH_Crp_2	1.77
PF03401	TctC	0.88
PF01656	CbiA	0.88
PF05532	CsbD	0.88
PF00239	Resolvase	0.88
PF13507	GATase_5	0.88
PF13436	Gly-zipper_OmpA	0.88
PF13847	Methyltransf_31	0.88
PF01106	NifU	0.88
PF03928	HbpS-like	0.88
PF04120	Iron_permease	0.88
PF01068	DNA_ligase_A_M	0.88
PF12833	HTH_18	0.88
PF09361	Phasin_2	0.88
PF04140	ICMT	0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0694	Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.88
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.88
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.88
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.88
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.88
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.88

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
All Organisms	root	All Organisms	23.89 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
cellular organisms	root	All Organisms → cellular organisms	23.89 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	23.89 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.65 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.73 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.65 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.42 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.65 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.77 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.65 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.88 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2070309004|prs_FIHLEPW02P2Z0X	Not Available	510
2070309004|prs_FIHLEPW02Q5XHQ	Not Available	511
3300000597|AF_2010_repII_A1DRAFT_10087007	Not Available	778
3300000793|AF_2010_repII_A001DRAFT_10118095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555
3300004633|Ga0066395_10021014	All Organisms → cellular organisms → Bacteria → Proteobacteria	2595
3300005175|Ga0066673_10139401	Not Available	1341
3300005179|Ga0066684_10899985	Not Available	578
3300005332|Ga0066388_100284444	Not Available	2297
3300005332|Ga0066388_101345487	All Organisms → cellular organisms → Bacteria → Proteobacteria	1235
3300005332|Ga0066388_101439316	Not Available	1200
3300005332|Ga0066388_102579226	Not Available	925
3300005332|Ga0066388_102787169	Not Available	893
3300005332|Ga0066388_104718996	Not Available	693
3300005332|Ga0066388_104801952	Not Available	687
3300005536|Ga0070697_101713099	Not Available	562
3300005561|Ga0066699_11253834	Not Available	508
3300005569|Ga0066705_10647385	Not Available	643
3300005764|Ga0066903_101147242	All Organisms → cellular organisms → Bacteria	1438
3300005764|Ga0066903_102858288	Not Available	937
3300005764|Ga0066903_103457580	Not Available	851
3300005764|Ga0066903_104444178	All Organisms → cellular organisms → Bacteria → Proteobacteria	748
3300005764|Ga0066903_104452434	Not Available	748
3300005764|Ga0066903_105456566	Not Available	671
3300005764|Ga0066903_105579868	Not Available	662
3300005764|Ga0066903_106772359	Not Available	596
3300009792|Ga0126374_10738008	All Organisms → cellular organisms → Bacteria → Proteobacteria	745
3300009792|Ga0126374_11625994	Not Available	535
3300010046|Ga0126384_12507098	Not Available	501
3300010048|Ga0126373_10543994	Not Available	1208
3300010048|Ga0126373_11476045	All Organisms → cellular organisms → Bacteria	745
3300010048|Ga0126373_13219826	Not Available	508
3300010358|Ga0126370_10226546	Not Available	1432
3300010358|Ga0126370_10556893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	981
3300010358|Ga0126370_12130069	Not Available	551
3300010359|Ga0126376_10619415	Not Available	1027
3300010359|Ga0126376_10983864	Not Available	842
3300010360|Ga0126372_10643077	Not Available	1025
3300010361|Ga0126378_11847741	All Organisms → cellular organisms → Bacteria → Proteobacteria	687
3300010362|Ga0126377_11653235	Not Available	715
3300010366|Ga0126379_10916151	Not Available	979
3300010376|Ga0126381_101156199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1118
3300010376|Ga0126381_102166901	Not Available	800
3300010398|Ga0126383_10234405	Not Available	1789
3300010398|Ga0126383_13327032	Not Available	525
3300012948|Ga0126375_10175471	Not Available	1380
3300012971|Ga0126369_12987430	Not Available	554
3300016270|Ga0182036_11107392	Not Available	656
3300016294|Ga0182041_10254645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1431
3300016319|Ga0182033_12068856	Not Available	519
3300016341|Ga0182035_10412407	Not Available	1137
3300016371|Ga0182034_10755440	Not Available	830
3300016371|Ga0182034_10851351	Not Available	782
3300016371|Ga0182034_11039494	Not Available	709
3300016387|Ga0182040_10551140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	928
3300016387|Ga0182040_10660864	Not Available	851
3300016387|Ga0182040_10825082	Not Available	765
3300016387|Ga0182040_10907339	Not Available	731
3300016404|Ga0182037_10633361	Not Available	910
3300016445|Ga0182038_10436773	Not Available	1105
3300018482|Ga0066669_10553427	Not Available	1003
3300021560|Ga0126371_11732815	Not Available	748
3300026316|Ga0209155_1181173	Not Available	679
3300027680|Ga0207826_1048033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1183
3300031543|Ga0318516_10390845	Not Available	802
3300031543|Ga0318516_10822456	Not Available	524
3300031545|Ga0318541_10243167	Not Available	1000
3300031545|Ga0318541_10339088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	839
3300031546|Ga0318538_10689967	Not Available	554
3300031573|Ga0310915_10008109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5988
3300031573|Ga0310915_10078856	Not Available	2185
3300031573|Ga0310915_10085474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2106
3300031573|Ga0310915_10124171	Not Available	1764
3300031573|Ga0310915_10273938	Not Available	1190
3300031573|Ga0310915_10279634	Not Available	1177
3300031573|Ga0310915_10279742	All Organisms → cellular organisms → Bacteria	1177
3300031668|Ga0318542_10522448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618
3300031719|Ga0306917_10903514	Not Available	691
3300031744|Ga0306918_10111981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1962
3300031744|Ga0306918_10361792	Not Available	1127
3300031770|Ga0318521_10734459	Not Available	600
3300031797|Ga0318550_10656007	Not Available	503
3300031833|Ga0310917_10338712	All Organisms → cellular organisms → Bacteria	1020
3300031879|Ga0306919_10154511	Not Available	1676
3300031879|Ga0306919_10255469	Not Available	1319
3300031890|Ga0306925_10102246	All Organisms → cellular organisms → Bacteria	3051
3300031890|Ga0306925_10298568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1733
3300031890|Ga0306925_11307038	Not Available	720
3300031897|Ga0318520_10796622	Not Available	593
3300031910|Ga0306923_10147344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2685
3300031910|Ga0306923_10239504	All Organisms → cellular organisms → Bacteria	2075
3300031910|Ga0306923_11385387	Not Available	741
3300031912|Ga0306921_10580916	Not Available	1297
3300031912|Ga0306921_10728005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1138
3300031912|Ga0306921_11684797	Not Available	686
3300031941|Ga0310912_11117331	All Organisms → cellular organisms → Bacteria	602
3300031942|Ga0310916_10435406	Not Available	1116
3300031942|Ga0310916_11437598	Not Available	564
3300031946|Ga0310910_10581232	Not Available	888
3300031946|Ga0310910_11327051	Not Available	555
3300031947|Ga0310909_10037296	All Organisms → cellular organisms → Bacteria → Proteobacteria	3650
3300031954|Ga0306926_11744570	Not Available	709
3300032001|Ga0306922_10579237	Not Available	1191
3300032001|Ga0306922_11019363	Not Available	853
3300032010|Ga0318569_10246764	Not Available	830
3300032042|Ga0318545_10250295	Not Available	636
3300032059|Ga0318533_10197034	Not Available	1441
3300032261|Ga0306920_102421787	Not Available	724
3300032261|Ga0306920_102465270	Not Available	716
3300033289|Ga0310914_10801317	Not Available	840
3300033290|Ga0318519_10441241	Not Available	779

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.30%
Loam	Environmental → Terrestrial → Soil → Loam	17.70%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.42%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.77%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_05749460	2070309004	Green-Waste Compost	MALARATDDPALKQYYEELALGLVQKAGSEPDPDNAAALLAIIKPDSGRH
prs_02547730	2070309004	Green-Waste Compost	MALARASDDPALKQYYEELAIGFVQKAGNEHDPDNTAALLATINPGSGNTNRRGR
AF_2010_repII_A1DRAFT_100870072	3300000597	Forest Soil	MTLARASDDPALKQYYEELALKFAEHAANEHDPDNTAALLTIIRPDSGNTRGR*
AF_2010_repII_A001DRAFT_101180952	3300000793	Forest Soil	MTLARASDDLALKQYYEELALKFAENAANEHDPDNTVPLPVKPDTGNXNRRGR*
Ga0066395_100210142	3300004633	Tropical Forest Soil	MTLARASDDPALKLYYEELALKFAQNAVNEHDDITVVPFPNLDSGNTNRHGH*
Ga0066673_101394011	3300005175	Soil	MALARASNDLVLKQRYEELALKFVQNAGSEPDPDNTAALLAIKPDSGANRRGR*
Ga0066684_108999852	3300005179	Soil	MALARASNDLVLKQRYEELALKFVQNAGSEPDPDNTAALLAIKPNSGTTNRRGR*
Ga0066388_1002844443	3300005332	Tropical Forest Soil	MTLARASDDPALKQYYEELALKFAENAANEHDPDNTSWRVSPSQADSGNTNRRGR*
Ga0066388_1013454873	3300005332	Tropical Forest Soil	MTLARASDDPALKQYYEELALKFAESAANEHDPDNISWRVSSSQADSGNTNRHRR*
Ga0066388_1014393162	3300005332	Tropical Forest Soil	MALARASDDPALKQYYEELALGFVQKAGSEPDPYDAAALLAIIKPDSGKIPIDMSC*
Ga0066388_1025792262	3300005332	Tropical Forest Soil	MTLARASDDPTLKQYYEELALKFAENAANEDDPDNTAALLTTIKPDSGNTNRHER*
Ga0066388_1027871691	3300005332	Tropical Forest Soil	MALARASDGPVLKQYYEELALGFVQNARNEHDLDIITAPPLAIIEPKS
Ga0066388_1047189961	3300005332	Tropical Forest Soil	MALARASDDPALKQYYEELALGFVQKAGSEPDPDKSAALLAIYQARSGKHQ*
Ga0066388_1048019522	3300005332	Tropical Forest Soil	MTLARASDDPALKQYYEELALKFAEHAANEHDQDNTAALLATIKPDSGNTNPHGR*
Ga0070697_1017130992	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MALARLSDDPALKQYYLELALEFVRNAGSERDLELLAASLATI
Ga0066699_112538341	3300005561	Soil	MALARASNDLVLKQRYEELALKFVQNAGSEPDPDNTAALLAIKPDS
Ga0066705_106473851	3300005569	Soil	MALARASNDLVLKQRYEELALKFVQNAGSEPDPDNTAALLAIKPDSGANRGGR*
Ga0066903_1011472424	3300005764	Tropical Forest Soil	MMLARASDDPALKQYYEELALKFAEHAANEYDPDNAAQLPIKSDGGSVNPQRRH*
Ga0066903_1028582882	3300005764	Tropical Forest Soil	MTLARASDDPALKQYYEELALMFAQNVANDHDPDDITVAPFANPDSGNTNWHGH*
Ga0066903_1034575802	3300005764	Tropical Forest Soil	MTLARASDDPVLKRYYEELALKFAENAANEHDPDNVPWRVSPIQADSGNANRHRR*
Ga0066903_1044441783	3300005764	Tropical Forest Soil	MTLARASDDPALKQYYEELALKFAESAANEHDPDNIVARLVKPSR*
Ga0066903_1044524342	3300005764	Tropical Forest Soil	MTLARASDDPALKQYYEELALKFAQDAAENEHDPDDIPSRLSPTQAR*
Ga0066903_1054565662	3300005764	Tropical Forest Soil	MTLARASNDPALKQYYEALALEFVEKAANEHDPDDNTVALSPTQADHGRQ*
Ga0066903_1055798682	3300005764	Tropical Forest Soil	QVCMTLARASDDPALKQYYEELALAFAQNAANEHDDITVAPFANPDSGNINRHESRQFIRP*
Ga0066903_1067723591	3300005764	Tropical Forest Soil	ASDDPALKQYYEELALKFAENAANEHDPDNTSWRVSPSQADSGNTNRRGR*
Ga0126374_107380083	3300009792	Tropical Forest Soil	LKQYYEELALKFAESAANEHDPDNISWRVSSSQADSGNTNRHRR*
Ga0126374_116259942	3300009792	Tropical Forest Soil	MTLGRAIDDPALKLYYEELALKFAQNAVNEHDDITVVPFPNLDSGNTNRHGH*
Ga0126384_121432702	3300010046	Tropical Forest Soil	MTLARASDDPTLKQYYEELALKFAENAANEDDPDNTAALLANRHGR*
Ga0126384_125070981	3300010046	Tropical Forest Soil	MTLARGSDDPALKQYYEELALKFAENAANEPDPDNAAAPLTTIKPDSGNTNRHER*
Ga0126373_105439942	3300010048	Tropical Forest Soil	MALARASDDPALKQYYEELALKFAQNAGGERDPDNTDAPLPKPDSGNTNRHRY*
Ga0126373_114760452	3300010048	Tropical Forest Soil	MTLARASDDPVLKQYYEELALAFAQNAANEHDDITVAPFANPDSGNINRHGSRQFIRCP*
Ga0126373_132198262	3300010048	Tropical Forest Soil	MTLARGSNDPALKQYYEELALKFAENAANEHDPENTAPLPTKPDSGNTNHGRY*
Ga0126370_102265461	3300010358	Tropical Forest Soil	YDELALKFAENAAKEHDPDNIPLRVSPIQADSGNTNRHGR*
Ga0126370_105568933	3300010358	Tropical Forest Soil	KQYYEELALKFAENAASQHDPDNQYTVARLAHPSDSGYTNRHGR*
Ga0126370_121300692	3300010358	Tropical Forest Soil	MTLARSSDDPALKQYYEELALKFAENAANEHDSDNTAPLPIKPDSGNTNPQAH*
Ga0126376_106194151	3300010359	Tropical Forest Soil	MTLARASDDPALKLYYEELALKFAQNAVNEHDDITVVPFPNLDSCNTNRHGH*
Ga0126376_109838642	3300010359	Tropical Forest Soil	MALARASDDPALKQYYEELALKFAQNAGGERDPDNTDAPLPRPDSGNTNRHRY*
Ga0126372_106430771	3300010360	Tropical Forest Soil	MTLARASDDPALKLYYEELALKFAQNAVNEHDDITVVPFRNLDSGNTNRHGH*
Ga0126378_118477412	3300010361	Tropical Forest Soil	MTLARASDEPALKQYYEELALKFAENAANEHDHDNTASLPIKPDSGNANPHGRY*
Ga0126377_116532352	3300010362	Tropical Forest Soil	MTLARTSDDPALKQYYEELALKFAENAANEHDPDNTAPLPIKPDSGNTNPQGH*
Ga0126379_109161513	3300010366	Tropical Forest Soil	MTLARASDDPALKQYHEELALAFAQNAANEHDDITVVPFPNLDSRNTNRHGH*
Ga0126381_1011561992	3300010376	Tropical Forest Soil	MTLARTSDDPALKQYYEELTLKFAENAANEHDSDNTAPLPIKPDSGNTNPQGH*
Ga0126381_1021669011	3300010376	Tropical Forest Soil	NPALKQYYEELALKFVQNAGGERDPDNTDAPLPKPDSGNTNRHRY*
Ga0126383_102344051	3300010398	Tropical Forest Soil	MALARASDDPALKQYYEELALKFAQNAGGERDPDNTDAPLPKPDSGNTNRHR*
Ga0126383_133270322	3300010398	Tropical Forest Soil	VLTCNSWRQAQVCMTLARATDDATLRQHYEELALKFAENAANEDDPDTLAPLANPSPIAATTNRHGR*
Ga0126375_101754713	3300012948	Tropical Forest Soil	MTLARTTDDAALRQYYEELALKFAENAANEYDPDNTAPLPIKPDSGNTNPQGH*
Ga0126369_129874301	3300012971	Tropical Forest Soil	MALARASDGPVLKQYYEELALGFVQNARNEHDLDIITAPPLAIIEPKSDS
Ga0182036_102911593	3300016270	Soil	MTLARASDDPALKQYYEELALKFAQNAANEHDDINVAPFATPD
Ga0182036_111073922	3300016270	Soil	MALARASDDPALKQYYEELALGFVQNAANEHDPDDSRVSPTQADSGNTNRHGR
Ga0182041_102546453	3300016294	Soil	MTLARASDDPALKLYYEELALKFAQDAAENEHDPDDIPSRLTPTQAR
Ga0182033_120688561	3300016319	Soil	MALARASDDPALKQYYEELALKFAQNAGGERDPDNTDAPLPKPDSSNTNRHRY
Ga0182035_104124072	3300016341	Soil	MALAHASDDPALKQYYEELALGFVQKAGSEPDPDKSAVLLAIYQPQ
Ga0182034_107554401	3300016371	Soil	MTLARASDDPELKQYYEELALEFVQNAGNEPDSDNTAALLAIIKPDSGNTNRHGRANKP
Ga0182034_108513511	3300016371	Soil	RASDDPALKQYYEELALKFAQNAGGERDPDNTDAPLPKPDSSNTNRHRY
Ga0182034_110394943	3300016371	Soil	MALARASDDPALKQYYEELALGFVQKAGSEPDPDNAAALLAIIKPDSGRH
Ga0182040_105511403	3300016387	Soil	DDPALKLYYEELALKFAQDAAENEHDPDDIPSRLSPTQAR
Ga0182040_106608641	3300016387	Soil	ASDDPALKQYYEELALKFVQNAANEHDPDDISSRVSPTQADSGNTNRHGR
Ga0182040_108250821	3300016387	Soil	MALARASDDPALKQYYEELALKFAQNAVGERDPDNTDAPLPKPDSGNTNRHRY
Ga0182040_109073392	3300016387	Soil	MSLARVSDDTVLKQRYEELALEFAKNAGDEPDLDITAPP
Ga0182037_106333611	3300016404	Soil	MALARATDDPALKQYCEEMALGFVQKARREPDPDNAAALLAIIKPDSGKYQ
Ga0182038_104367733	3300016445	Soil	MALARASDDPAVKQYYEELALGFVQKAGSEPDPDKSAVLLAIYQPQ
Ga0066669_105534272	3300018482	Grasslands Soil	MALARASNDLVLKQRYEELALKFVQNAGSEPDPDNTAALLAIKPDSGANRRGR
Ga0066669_110778511	3300018482	Grasslands Soil	MTLARASDDLALKQYYEELALKFAQNAANEHGPTIPATLLAIITR
Ga0126371_117328151	3300021560	Tropical Forest Soil	MALARASDDPALKQYYEELALKFAQNAGGERDPDNTDAPLPKPDSGNTNRHRY
Ga0209155_11811733	3300026316	Soil	VCMALARASNDLVLKQRYEELALKFVQNAGSEPDPDNTAALLAIKPDSGANRRGR
Ga0207826_10480333	3300027680	Tropical Forest Soil	MALARASDDPALKQYYEELALGFVEKAGNEHDPDNTAALLATIKPDSGNTNRHRR
Ga0318516_103908451	3300031543	Soil	MALARASDDPALKQYYEELALGFVQKAGSEPDPDDAAALLAIIKPDSGKYQ
Ga0318516_108224561	3300031543	Soil	MALARASDDPALKQYYEELALGFVQKAGSDLDPDNSAALLAVIKPDSGKHQ
Ga0318541_102431672	3300031545	Soil	MALARATDDPALKQYYEELALGLVQKAGNEPDPDNAAALLAIIKPDSARH
Ga0318541_103390881	3300031545	Soil	MALARASDDPALKQYYEELALGFVQKAGSEPDPDKSAVLLAIYQPQ
Ga0318538_106899672	3300031546	Soil	MALARATDDPALKQYYEELALGSVQKAGSEPDPDNAAALLAIIKPDSGRH
Ga0310915_100081097	3300031573	Soil	MALARATDDPALKQYYEELALGLVQKAGNEPDPDNAAALLAIIKPDSGRH
Ga0310915_100788562	3300031573	Soil	MALARASDDPALKQYYEELALGFVQNAANEHDPDDSRVSPTQADSANRHGH
Ga0310915_100854742	3300031573	Soil	MALARASDDPALKQYYEELALGFVQKAGSEPDPDDATALLAIIEPDSGKYQ
Ga0310915_101241712	3300031573	Soil	MALARASDDPALKQYYEELALEFVQKAGSETDPDNSAALLAIIKPDSGKHQ
Ga0310915_102739383	3300031573	Soil	MTLARASDDPALKQYYEELALKFAQNAVNEHDDITVVPFRNLDSGNTNRHGH
Ga0310915_102796343	3300031573	Soil	MALARASDDPALKQYYEELALGFVQQAGNEFDPDNTAALLAKPDSRQHQ
Ga0310915_102797421	3300031573	Soil	MALARACDDPALKQYYEELALGFVQKAGNEFDPDNTAALLAKPDSGYTNRHRR
Ga0318542_105224481	3300031668	Soil	VCMALARASDDPVLKQYYEELALAFVQKAGSEPDPDNSAALLAIIKPDSGKHQ
Ga0306917_109035141	3300031719	Soil	MTLARASDDPALKLYYEELALKFAQNAVNEHDDITVVPFPNLDSGN
Ga0306918_101119813	3300031744	Soil	MALARASDDPALKQYYEELALGFVQKAGSESDPDNTAAPLDIIKPDSGN
Ga0306918_103617922	3300031744	Soil	MTLARASDDPALKQYYEELALKFVQSAANEHDDITVAPFANPDSGNTNRHGRANKP
Ga0318521_107344591	3300031770	Soil	MALARASDDPALKQYYEELALGFVQKAGSEPDPDKSAALLDDYVRSSRIR
Ga0318550_106560071	3300031797	Soil	ARATDDPALKQYYEELALGLVQKAGNEPDPDNAAALLAIIKPDSARH
Ga0310917_103387121	3300031833	Soil	MALARASDDPALKQYYEELALGFVQKAGSESDPDNTAAPLDIIKPDSGNTNRHGRHGR
Ga0306919_101545114	3300031879	Soil	MALARASDDPALKQYYEELALGFVQNAANEHDPDDSRVSPTQADSTNRHGH
Ga0306919_102554693	3300031879	Soil	MALARASDDPALKQYYEELALGFVQQAGNEFDPDNTAALLAKPDSR
Ga0306925_101022463	3300031890	Soil	MALARASDDPALKQYYEELALGFVQQAGNEFDPDNTAALLAKPDSGYTNRHRR
Ga0306925_102985684	3300031890	Soil	RASDDPALKQYYEELALKFAQNAANEHDDINVAPFATPDSGKTNRHGH
Ga0306925_113070381	3300031890	Soil	RASDDPTLKQYYEELALKFAQNAANEHDDITVVPFPNLDSGNTNWHGH
Ga0318520_107966222	3300031897	Soil	MALARASDDPALKQYYEELALGFVQKAGSEPDSDNTAAPLAIIKP
Ga0306923_101473443	3300031910	Soil	MTLARASDDPALKLYYEELALKFAQDAAENEHDPDDIPSRLSPTQAR
Ga0306923_102395041	3300031910	Soil	MALARTTDDPALKQYYEELALGFVQKAGSEPDPDNSAALLAIIKPDSGKHQ
Ga0306923_113853872	3300031910	Soil	QAQVCMTLARASDDPALKQYYEELALKFAQNAANEHDDITVVPFPNLDSGNTNWHGH
Ga0306921_105809161	3300031912	Soil	MTLARASDDPALKQYYEELALKFAQNAANEHDDITVVPFPNLDSGNTNWHGH
Ga0306921_107280052	3300031912	Soil	MALARASDDPALKQYYEEMALRFVQNAANEHDPDDISSRVSPTQADSGNTNRHGR
Ga0306921_116847971	3300031912	Soil	MTLARASDDPALKQYYEELALKFAQNAANEHDDINVAPFATPDSGKTNRHGH
Ga0310912_111173312	3300031941	Soil	RVCMALARASDDPALKQYYEELALGFVQKAGSESDPDNTAAPLDIIKPDSGNTNRHGRHG
Ga0310916_104354061	3300031942	Soil	MALARACDDPALKQYYEELALGFVQKAGNEFDPDNTAALLAKPDSGYTNRHR
Ga0310916_114375982	3300031942	Soil	ARASDDPALKQYYEELALKFAQNAGGERDPDNTDAPLPKPDSSNTNRHRY
Ga0310910_105812321	3300031946	Soil	MTLARASDDPALKLYYEELALKFAQNAVNEHDDITVVPFSNLDSCNTNRHRH
Ga0310910_113270512	3300031946	Soil	MALARASDDPALKQYYEELALKFVQNAGGERDPDNTEAPLLKPDSGNTSRHRY
Ga0310909_100372963	3300031947	Soil	MALARASDDPALKQYYEELALEFVQKAGSETDPDNSAALLAIIKPDSCKHQ
Ga0306926_117445702	3300031954	Soil	ARASDDPALKQYYEELALKFARNAVNERDDITVVPFPNLDSGNTNRHGH
Ga0306922_105792372	3300032001	Soil	MALARASDDPALKQYYEELALKFAQNAVGERDPDNTDAPLPKPDSSNTNRHRY
Ga0306922_110193631	3300032001	Soil	MTLARASDDPALKQYYEELALKFAQYAAKEHDTDNIPWRVSPTQADRGNTNRYGR
Ga0318569_102467642	3300032010	Soil	MTLARASDDPALKLYYEKLALKFAQNAVNEHDDITVVPFPNLDSGNTNRHGH
Ga0318545_102502951	3300032042	Soil	MTLARASDDPALKQYYEELALKFAQNAANEHDDITVVPFPNLDSGNTNRHGH
Ga0318533_101970341	3300032059	Soil	QARVCMALARASDDPALKQYYEELALEFVQKAGSETDPDNSAALLAIIKPDSGKHQ
Ga0306920_1024217872	3300032261	Soil	MALARASDDPALKQYYEELALGFVQKAGNEHDPDNTAALLATINPDSGNTNRRGR
Ga0306920_1024652702	3300032261	Soil	MALARASDDPVLKQYYEELALGFVQKAGSEPDPDDAAALLAIIKPDSGKYQ
Ga0310914_108013171	3300033289	Soil	MTLARASDDPALKQYYEELALKFAQNAVNEHDDITAVPFPDLDSGNTNR
Ga0318519_104412411	3300033290	Soil	VCMALARASDDPALKQYYEELALEFVQKAGSETDPDNSAALLAIIKPDSGKHQ