Metagenome Family F081933

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081933
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	65 residues
Representative Sequence	MVLLASAYDQSRFLKAQDLTAEKKFRIKSVTEEEIGIGKDKERKLVVWFTNDDRGLVLNRVNNR
Number of Associated Samples	67
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.33 %
% of genes near scaffold ends (potentially truncated)	87.72 %
% of genes from short scaffolds (< 2000 bps)	87.72 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.982 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.702 % of family members)
Environment Ontology (ENVO)	Unclassified (55.263 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.421 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.96% β-sheet: 23.91% Coil/Unstructured: 64.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00476	DNA_pol_A	13.16

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	13.16

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.98 %
Unclassified	root	N/A	7.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.98 %
Unclassified	root	N/A	7.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.98 %
Unclassified	root	N/A	7.02 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	84.21 %
Unclassified	root	N/A	7.02 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.26 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	76.32 %
Unclassified	root	N/A	7.02 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5.26 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.40 %
Unclassified	root	N/A	7.02 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	5.26 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	11.40 %
Unclassified	root	N/A	7.02 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.26 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	11.40 %
Unclassified	root	N/A	7.02 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.26 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	11.40 %
Unclassified	root	N/A	7.02 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.26 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.75 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	11.40 %
Unclassified	root	N/A	7.02 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5.26 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573001\|GZR05M101AY1SL	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14133926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1245	Open in IMG/M
3300000955\|JGI1027J12803_105244493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300000956\|JGI10216J12902_126441993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1530	Open in IMG/M
3300005178\|Ga0066688_10683377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300005332\|Ga0066388_100170411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2776	Open in IMG/M
3300005332\|Ga0066388_100194067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2647	Open in IMG/M
3300005332\|Ga0066388_100989814	All Organisms → cellular organisms → Bacteria → Proteobacteria	1406	Open in IMG/M
3300005332\|Ga0066388_102310179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	973	Open in IMG/M
3300005332\|Ga0066388_103162311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	841	Open in IMG/M
3300005332\|Ga0066388_103170078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	840	Open in IMG/M
3300005332\|Ga0066388_104558146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	705	Open in IMG/M
3300005332\|Ga0066388_106301274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	599	Open in IMG/M
3300005332\|Ga0066388_107091394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	564	Open in IMG/M
3300005713\|Ga0066905_100568826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	954	Open in IMG/M
3300005764\|Ga0066903_100113442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3729	Open in IMG/M
3300005764\|Ga0066903_100664327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1826	Open in IMG/M
3300005764\|Ga0066903_102575853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	986	Open in IMG/M
3300005764\|Ga0066903_103427494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	855	Open in IMG/M
3300005764\|Ga0066903_104501260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	743	Open in IMG/M
3300005764\|Ga0066903_105692049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300005764\|Ga0066903_107274371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	572	Open in IMG/M
3300005983\|Ga0081540_1344775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300010046\|Ga0126384_12437082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	507	Open in IMG/M
3300010358\|Ga0126370_10218070	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300010359\|Ga0126376_11242437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	762	Open in IMG/M
3300010359\|Ga0126376_12904687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	529	Open in IMG/M
3300010361\|Ga0126378_11660931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	726	Open in IMG/M
3300010361\|Ga0126378_11940111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300010362\|Ga0126377_12817309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300010362\|Ga0126377_13121840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	535	Open in IMG/M
3300010366\|Ga0126379_11690267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	738	Open in IMG/M
3300010366\|Ga0126379_12892592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	575	Open in IMG/M
3300010398\|Ga0126383_13634835	Not Available	504	Open in IMG/M
3300012948\|Ga0126375_10316986	All Organisms → cellular organisms → Bacteria → Proteobacteria	1090	Open in IMG/M
3300015373\|Ga0132257_103143843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	601	Open in IMG/M
3300016270\|Ga0182036_10352912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1134	Open in IMG/M
3300016270\|Ga0182036_10782748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300016341\|Ga0182035_10690342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	888	Open in IMG/M
3300016341\|Ga0182035_12009986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300016387\|Ga0182040_10806562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	774	Open in IMG/M
3300016387\|Ga0182040_11762655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300016404\|Ga0182037_10244798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1416	Open in IMG/M
3300016404\|Ga0182037_10255978	All Organisms → cellular organisms → Bacteria → Proteobacteria	1388	Open in IMG/M
3300016404\|Ga0182037_10406468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1123	Open in IMG/M
3300016404\|Ga0182037_11784548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300016422\|Ga0182039_10409426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1153	Open in IMG/M
3300016422\|Ga0182039_10923124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	780	Open in IMG/M
3300018001\|Ga0187815_10108938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1168	Open in IMG/M
3300018482\|Ga0066669_12235099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	520	Open in IMG/M
3300020581\|Ga0210399_10302183	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300021560\|Ga0126371_10261133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1849	Open in IMG/M
3300021560\|Ga0126371_12471452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300028878\|Ga0307278_10274946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	746	Open in IMG/M
3300031446\|Ga0170820_14454614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	886	Open in IMG/M
3300031544\|Ga0318534_10168282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1267	Open in IMG/M
3300031545\|Ga0318541_10210686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1076	Open in IMG/M
3300031545\|Ga0318541_10837243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300031546\|Ga0318538_10087464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1591	Open in IMG/M
3300031561\|Ga0318528_10238915	All Organisms → cellular organisms → Bacteria → Proteobacteria	974	Open in IMG/M
3300031640\|Ga0318555_10178617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1141	Open in IMG/M
3300031640\|Ga0318555_10501205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	658	Open in IMG/M
3300031679\|Ga0318561_10536985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300031708\|Ga0310686_107177129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1959	Open in IMG/M
3300031719\|Ga0306917_10169733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1633	Open in IMG/M
3300031719\|Ga0306917_11055402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300031744\|Ga0306918_10117171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1924	Open in IMG/M
3300031748\|Ga0318492_10032788	All Organisms → cellular organisms → Bacteria → Proteobacteria	2343	Open in IMG/M
3300031748\|Ga0318492_10633140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300031764\|Ga0318535_10493482	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300031771\|Ga0318546_11302046	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300031777\|Ga0318543_10468365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300031781\|Ga0318547_10589809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	689	Open in IMG/M
3300031782\|Ga0318552_10692700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	520	Open in IMG/M
3300031792\|Ga0318529_10176233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	989	Open in IMG/M
3300031798\|Ga0318523_10225403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	937	Open in IMG/M
3300031798\|Ga0318523_10317544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	777	Open in IMG/M
3300031835\|Ga0318517_10215983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	865	Open in IMG/M
3300031846\|Ga0318512_10216857	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300031879\|Ga0306919_11010906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300031879\|Ga0306919_11234030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300031890\|Ga0306925_10033237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	5284	Open in IMG/M
3300031890\|Ga0306925_11187598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	765	Open in IMG/M
3300031890\|Ga0306925_11264501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	735	Open in IMG/M
3300031910\|Ga0306923_12402423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300031912\|Ga0306921_10245914	All Organisms → cellular organisms → Bacteria → Proteobacteria	2096	Open in IMG/M
3300031912\|Ga0306921_10962554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	965	Open in IMG/M
3300031941\|Ga0310912_11044671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	625	Open in IMG/M
3300031946\|Ga0310910_11018943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	647	Open in IMG/M
3300031946\|Ga0310910_11064918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300031947\|Ga0310909_10080556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2581	Open in IMG/M
3300031947\|Ga0310909_10454172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1075	Open in IMG/M
3300031947\|Ga0310909_10776070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	793	Open in IMG/M
3300031954\|Ga0306926_11278126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	858	Open in IMG/M
3300032001\|Ga0306922_12339296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300032041\|Ga0318549_10406634	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300032076\|Ga0306924_11146672	All Organisms → cellular organisms → Bacteria → Proteobacteria	844	Open in IMG/M
3300032076\|Ga0306924_11775931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300032076\|Ga0306924_12327154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300032180\|Ga0307471_102023292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	723	Open in IMG/M
3300032205\|Ga0307472_102484719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300032261\|Ga0306920_101637307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	914	Open in IMG/M
3300032261\|Ga0306920_102471938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	715	Open in IMG/M
3300032261\|Ga0306920_102645048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	687	Open in IMG/M
3300032261\|Ga0306920_103027008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300032261\|Ga0306920_103440332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300033289\|Ga0310914_10835172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	820	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.37%
Host-Associated	Host-Associated	2.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.49%
Plants	Host-Associated → Plants	2.63%
Aquatic	Environmental → Aquatic	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.63%
Freshwater	Environmental → Aquatic → Freshwater	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.58%
Loam	Environmental → Terrestrial → Soil → Loam	14.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	58.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.75%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.88%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.88%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD2_07461820	2189573001	Grass Soil	VRKVVLLASSYDTSKFFKAADLEAEKKLRVKTVTEEVVGVGAEQQKKLVVWFTNDERGLVLNKTNNR
ICChiseqgaiiFebDRAFT_141339262	3300000363	Soil	MVLLASSYDQSKYFKAVDLGNEKKLRIKSVTEEVVGTDNNKDLKLVVWFTSDERGLVLNRVNNRTLRGAF
JGI1027J12803_1052444932	3300000955	Soil	RNSMLLASDYDKSQYLKSEDIGDRERKFRIKDVTEEEVGEKKEKKLVVWLSSNDQHLHGRGLIVNKTNNRVLRAAFGD
JGI10216J12902_1223935441	3300000956	Soil	MLLASAYDQSKYFKAADIPQEKKLRIKDVTEEEIGVGQDKEKKLVVWFTNTKSH*
JGI10216J12902_1264419931	3300000956	Soil	MVLLASSYDQSRFLKAADLAREKKFRIKSATEEEVGEKKERKLVVWFTNDERGLVL
Ga0066688_106833772	3300005178	Soil	MVLLASAYDQSRFLKAQDLTAEKKFKIKSVTEEDVGVGKDKERKLVVWFTNDARGLVLN
Ga0066388_1001704111	3300005332	Tropical Forest Soil	MVLLASAYDQTRFLKSEDLPAEKKFRIKSVTEEEVGIGKDKERKLVVWFTNDSRGLVLNRVNNR
Ga0066388_1001940671	3300005332	Tropical Forest Soil	MLLASNYDQNRFFKAADMPQEKKLRIKDVTEEQIGVGADKERKLCVWFTNDARGLVLNKT
Ga0066388_1009898141	3300005332	Tropical Forest Soil	MCVQLYDQSRFLKADDLSNEKKFKIKTVSEEEIGIGKDKERKLVVWFTNDERGLVLNRVN
Ga0066388_1023101791	3300005332	Tropical Forest Soil	MVLLASSYDQSKYFKAQDITAEKKLKIKAVTEEEIGTGKDKEKKLVVWFTNDPRGLVLNRVNNRTLRGAFGDPVSGWI
Ga0066388_1031623112	3300005332	Tropical Forest Soil	MALLASTYDQSRFLKAQDLTTEKKFRIKSVTEEEIGIGKDKERKLVVWFTNDHRGLVLNRVNNRTI
Ga0066388_1031700782	3300005332	Tropical Forest Soil	MVLLASAYDQSRFLKAQDLTTEKKFRIKSVTEEEIGIGKDKERKLVVWFTNDHRGLVLNRVNNRTI
Ga0066388_1045581462	3300005332	Tropical Forest Soil	MPLLASAYDQARFLKSEDLPAEKKFRIKSVTEEEVGIGKDKERKLVVWFTNDSRGLVLNRVNNR
Ga0066388_1063012742	3300005332	Tropical Forest Soil	MVLLASNYDQNRFFKAADMPQEKKLRIKDVTEEQIGMGADKERKLCVWFTNDSRGLVLNNQQY*
Ga0066388_1070913941	3300005332	Tropical Forest Soil	MLLAAAYDQSRYYKAADMQAPKKLRIKDVTEEEIGVAQDKEKKLCVWFTNDPRGLVLNKTNNKH*
Ga0066905_1005688261	3300005713	Tropical Forest Soil	MVLLASAYDQSRFLKAQDLTAEKKFRIKSVTEEEIGIGKDKERKLVVWFTNDDRGLVLNRVNNR
Ga0066903_1001134421	3300005764	Tropical Forest Soil	MLLASNYDQSRFFKAADMTAEKKLRIKDVTEETIGADNEKKLCVWFTNDRHGLILNKTNNRTL
Ga0066903_1006643273	3300005764	Tropical Forest Soil	MLLASAYDQSKYLKAADMPQEKKLRIKDVTEEEIGVGRDKERKLCVWFTNDTRGLVLNRTNNRTLRGAFG
Ga0066903_1025758531	3300005764	Tropical Forest Soil	MVLLASTYDKSRFLKADDFDGERKFRIKAVTEELIGAGAEKEKKLVVWFTNDERGFVLNRVNNRTLRGAFGDNTVGW
Ga0066903_1034274941	3300005764	Tropical Forest Soil	MVLLASSYDQSKYFKAQDVTAEKKLKIKDVTEDEIGVGKDKEKKLVVWFTNDPRGLVLNRVNNRTLRGAFGDP
Ga0066903_1045012602	3300005764	Tropical Forest Soil	MVLLASTYDQSKYFKAQDLTAEKKLKIKAVTEDPIGVGKDKEKKLVVWFTNDPRDLVLNRVNNRTLRGAFGDPVSGWIGKIIIAFPTQDEFRGR
Ga0066903_1056920491	3300005764	Tropical Forest Soil	MVLLASSYDQPKYFRAQDITAEKKLKIKAVTEEEIGVGKDKEKKLVVWFTNDPR
Ga0066903_1072743712	3300005764	Tropical Forest Soil	MVLLASTYDQSKYFKAQDITAEKKLKIKAVTEEEIGVGKDKEKKLVVWFTNDPRGLV
Ga0081540_13447752	3300005983	Tabebuia Heterophylla Rhizosphere	MVLLASNYDQSKYFKAQDITAEKKLKIKAVTEEEIGVGKDKEKKLVVWFTNDPRGLVLNRVNN
Ga0126374_113109572	3300009792	Tropical Forest Soil	MVLLASSYDQSRFLKAADLEREKKFRIKSVTEESVGPEQKEKRLVAWFT
Ga0126384_124370821	3300010046	Tropical Forest Soil	MLLASAYDQSKYFKAADIPQEKKLRIKDVTEEEIGVGRDKERKLCVWFTNDTRGLVLNRTNNRTLR
Ga0126370_102180703	3300010358	Tropical Forest Soil	MEMVLLASAYDQTRFLKSEDLPAEKKFRIKSVTEEEVGIGKDKKERKLVVWFTNDSRGTSNL*
Ga0126376_112424372	3300010359	Tropical Forest Soil	MVLLASNYDQSRFLKAADLQGEKKFRIKSGTEEEVGVGKDKERKLVVWFTNDSRG
Ga0126376_129046871	3300010359	Tropical Forest Soil	MLLASNYDQSRFFKAADMTAEKKLRIKDVTEETIGADNEKKLCVWFTNDRHGLILNKTNNRTLRGAFGDACEGWKGKIVVVFPTQDD
Ga0126378_116609312	3300010361	Tropical Forest Soil	MVLLASSYDQSRFLKAADLQREKKFRIKNTTEELIGAEQKEKKLVVWFTNDERGLVLNKTNNRTIR
Ga0126378_119401112	3300010361	Tropical Forest Soil	MEMVLLASAYDQTRFLKSEDLPAEKKFRIKSVTEEEVGIGKDKERKLVVWFTNDSRGLVLNRVNNRT
Ga0126377_128173091	3300010362	Tropical Forest Soil	MVLLASTYDQSRFLKAADLEREKKFRVKSVTEEAVGTEQKEKKLVVWFTNDDRGL
Ga0126377_131218402	3300010362	Tropical Forest Soil	MVLLASDYDKSRFLKAEDFDREKKLRVKAVTEEEVGEKKEKKLVVWFTNDQRGLVLNRVNNRVLRGAF
Ga0126379_116902672	3300010366	Tropical Forest Soil	MLLASSYDQSKYFKAADVPTEKKLRIKDVTEEEIGMGKDKERKLCVWFTNDDRGLVLNKTNNRTLRGAFGDACDGWK
Ga0126379_128925922	3300010366	Tropical Forest Soil	MVLLASSYDQSKYFKAQDITAEKKLKIKAVTEEEVGVGKDKEKKLVVWFTNDPRGLVLNRVN
Ga0126383_136348352	3300010398	Tropical Forest Soil	MKMVLIASNYDQSKYFKAADMPQEKKLRIKDVTEEEIGMGQDKERKLCVWFTNDARGLVL
Ga0137385_105741811	3300012359	Vadose Zone Soil	MVLLASDFDRSRFLKAADLNGEKKFRIKSVTAEEIGTEKKERKPVLWFTNDER
Ga0126375_103169861	3300012948	Tropical Forest Soil	MLLASAYDQSRFFKAADVQAAKKLRIKDVTEEEIGVGQDKEKKLVVWFTNDPRGLVLNKTNNRTLRGAF
Ga0132257_1031438432	3300015373	Arabidopsis Rhizosphere	MPLLASEFDQSRFFRADDLTAEKKLKIKSVTAEDIGIGKDKDRKLVVWFANDKRGLPLNKTNNRTLRGKFGDDTAGWIGKI
Ga0132255_1060899762	3300015374	Arabidopsis Rhizosphere	MQNKEVQMLLASAYDKSRFLKSEDLDREKKFRIKTVTEEEVGEKKEKKLVVWFTN
Ga0182036_103529122	3300016270	Soil	MLLASSYDQTRWLKAADLPTEKKFRIKSVTVEEIGIGKDKETKLVVWFTNDPRGLVL
Ga0182036_107827482	3300016270	Soil	MVLLASSYDQSKYFKAQDLTAERKLKIKAVTEEEIGIGKDKEKKLVVWFPNDPRGLVLNR
Ga0182035_106903421	3300016341	Soil	MVLLASDYDKSRFLQAADIEGERKFRIKLVTEEEVGTGANKEKKLVVWFTNDDKGLVL
Ga0182035_120099861	3300016341	Soil	MLLASSYDQTRWLKAADLPTEKKFRIKSVTVEEIGIGKDKETKLVVWFTNDPRGLVLNRVNNRTIR
Ga0182040_108065621	3300016387	Soil	MLLASSYDQSRFLKAADLEREKKFRIKSVTEEVVGTEQEKKLVVRFTNDDRGL
Ga0182040_117626552	3300016387	Soil	MPLLASEFDQSRFFRADELLAEKKLKIKNVTVEDIGIGKDKERKLVVWFTNDRRGLPLNKTNNQTLRGKFG
Ga0182037_102447982	3300016404	Soil	MVLLASSFDQSKYFKAEDLTAEKKLKIKAVSAEDVGGGKDKERKLVVQFTNDKRALVLNRTNNRTIRGA
Ga0182037_102559782	3300016404	Soil	MLLASAYDQSRFFKAADVQAEKKLRIKDVTEEEIGVGQDKQKKLVVWFDNDPRGRVLNKTNNRTLRGAFGDDCAG
Ga0182037_104064682	3300016404	Soil	MVLLASSYDQSRFFKAADLEREKKCRIKSVTEEPVGPEQEKKLVVWYTNDERGLVLNKT
Ga0182037_117845483	3300016404	Soil	MVLLASSFDQSRFLKAGDLTSEKKFRVKAVTEEDIGVGKDKQHKLVVWFTNDPR
Ga0182039_104094262	3300016422	Soil	MLLASAYDQSRYFKAADVQAAKKLRIKDVTVEEIGVGQDKEKKLVVWFDNDPRGLVLNKTNNRTLR
Ga0182039_109231242	3300016422	Soil	MLLASTYDQSKYFKAADVPSEKKLRIKDVTEEYIGEGKDKERKLVVWFTNDKR
Ga0182038_110522862	3300016445	Soil	MVLLASSYDQSRFLKAADLEREKKFRIKGVTEEVIGTDEKEKKLVVW
Ga0187815_101089382	3300018001	Freshwater Sediment	MVILASEYDKSKYLKAGDLDGDKKFRIKGVTEEMIGVGADKEKKLVVWFTNDDRGLVLNRVNNRTIRGAYGNAVD
Ga0066669_122350991	3300018482	Grasslands Soil	MLLASSYDQSRYFKAADVTAEKKLRIKDVTVEELGVGKDKEKKLCVWFVNDARGLVLNKTNNRTLRGAFGDACD
Ga0210399_103021831	3300020581	Soil	MVLLASSYDTSKFFKAADLEAEKKLRVKTVTEETVGVGAEQQKKLVVWFTNDERGLV
Ga0126371_100988352	3300021560	Tropical Forest Soil	MVLLASNYDQSRFLKAEDLPAEKKFKIKLVTEEEIGIGKDKERKLVVWSLTTVAALS
Ga0126371_102611333	3300021560	Tropical Forest Soil	MLLASAYDQSKYFKAADMPTEKKLRIKDVTAEWIGTGNDKEEKLCVWFTNDHRGLVLNRTNN
Ga0126371_124714521	3300021560	Tropical Forest Soil	MVLLASNYDQNRFFKAADMPQEKKLRIKDVTEEQIGMGADKERKLCVWFTNDSRGLVLNKTNNRTL
Ga0307278_102749462	3300028878	Soil	MVLLASEYDKSKYLKSDDLDREKKFRIKAVTEELVGADRDKEKKLVVWFTNDPRGLVLNRINNRTIRGACGDD
Ga0170820_144546141	3300031446	Forest Soil	MVVLASSYDESQYFKSDLAAEKKLRIKNVTEEQIGMDKDKEQKLVVWFTNDKRGLVLNKTNNRVLRAAFGDDTAGWVGKI
Ga0318534_101682823	3300031544	Soil	MLLASAYDQSKYFKAADIPQEKKLRIKDVTEEEIGVGRDKERKLCVWFTNDTRGLVLNRTNNRTLRGAFG
Ga0318541_102106861	3300031545	Soil	MPLLASSYDQSKYFKAQDITAEKKLKIKAVTEEEIGVGKDKEKKLVVWFTNDPRGLVLNRVNNRAL
Ga0318541_108372432	3300031545	Soil	MVLLASNYDQSRFLKAADLQSEKKFRIKSVTEEEVGIGKDKERKLVVWFTNDARGLVLN
Ga0318538_100874641	3300031546	Soil	MLLASAYDQSKYFKAADIQQEKKLRIKDVTEEEIGVGRDKERKLCVWFTNDTRGLVLNRT
Ga0318528_102389151	3300031561	Soil	MLLASAFDQSRYFKAADVQAEKKLRIKDVTVEEIGVGQDKEKKLVVSFDNDPRRLVLNKTNNRILRAAFGDDC
Ga0318555_101786172	3300031640	Soil	MLLASAYDQSKYFKAADIQQEKKLRIKDVTEEEIGVGRDKERKLCVWFTNDTRGLVLNRTNNR
Ga0318555_105012051	3300031640	Soil	MPLLASSYDQSKYFKAQDITAEKKLKIKAVTEEEIGVGKDKEKKLVVWFTNDPRGLVLNRVNNRTLR
Ga0318561_105369852	3300031679	Soil	MVLLASSYDQTRWLKATDLTAEKKFRIKTVTVEEIGMGKDKETKLVVWFTNDPRGLVLNRVNNRTLRGTFG
Ga0310686_1071771292	3300031708	Soil	MVLLASAYDESRFFKAADLATEKKLRIKNATEEMIGTGADKERKLVVWFTNDKRGLVLNMIN
Ga0306917_101697332	3300031719	Soil	VLLASDYDKTRFLKAEDLSAEKKFRIKSVTEEEVGIGKDKERKLVVWFTNDSRGLVLNRVNNRTLRGAF
Ga0306917_110554021	3300031719	Soil	MVLLASNYDQSRFLKAEDLPAEKKFKIKLVTEEEIGIGKDKERKLVVWFTNDSRGLV
Ga0306918_101171712	3300031744	Soil	MVLLASSFDQSKYFKAEDLTAEKKLKIKAVSAEDVGGGKDKERKLVVQFTNDKRALVLNRTNNRTIRGAFGDDTAGWPGKIIVLFPTQD
Ga0318492_100327884	3300031748	Soil	MLLASAYDQSRYFKAADVQAEKKLRIKDVTEEDIGVGQDKEKKLVVWFTNDPRGLV
Ga0318492_106331402	3300031748	Soil	MVLLASAYDQSRYFKAADLQEEKKLRIKEATEEQIGAGAEKEKKLVVWFTNDERGLVLNKTNNRTIRGVT
Ga0318535_104934821	3300031764	Soil	MLLASAYDQSRYFKAADVQAEKKLRIKDVTEEDIGVGQDKEKKLVVWFTNDPRGLVLNKTNNRTLR
Ga0318546_113020461	3300031771	Soil	VVHLLASAYDQSRFFKAADLQQEKKLKIKSVTEEQVGENKDRKLVVWFTNDSRGLCLNRTNNRALRGAFGDSCDGW
Ga0318543_104683652	3300031777	Soil	MVLLASSYDQSRFLKAADLEREKKFRIKGVTEEVIGTDEKEKKLVVWFTNDKRGLVLNKTNNRT
Ga0318547_105898092	3300031781	Soil	VLLASDYDKTRFLKAEDLSAEKKFRIKSVTEEEVGIGKDKERKLVVWFTNDSRGLVLNRVNNRTLR
Ga0318552_106927002	3300031782	Soil	MVLLASSYDQSKYFKAQDITAEKKLKIKAVTEEEIGVGKDKEKKLVVWFTNDPRGLVLNRVNNRTL
Ga0318529_101762331	3300031792	Soil	MLLASAYDQSKYFKAADIQQEKKLRIKDVTEEEIGVGRDKERKLCVWFTNDTRGLV
Ga0318523_102254032	3300031798	Soil	MVLLASDYDKTRFLKAEDLSAEKKFRIKSVTEEEVGIGKDKERKLVVWFTNDSRGLVLNRVNNR
Ga0318523_103175442	3300031798	Soil	MLLASAYDQSKYFKAADIPQEKKLRIKDVTEEEIGVGRDKERKLCVWFTNDTRGVV
Ga0318517_102159831	3300031835	Soil	MLLASAYDQSKYFKAADIQQEKKLRIKDVTEEEIGVGRDKERKLCVWFTNDTRGLVLNRTNNRTLRGAFGDACDGWKGK
Ga0318512_102168572	3300031846	Soil	MVPLASNYDQSRFLKAADLQGEKKFRIKSVTEEDVGIGKDKERKLVVWFTNDARGLVLNRVEEVDDDLNDEITV
Ga0306919_110109061	3300031879	Soil	MVLLASNYDQSRFLKAEDLPAEKKFKIKLVTEEEIGIGKDKERKLVVWFTNDSR
Ga0306919_112340302	3300031879	Soil	LLASDYDKTRFLKAEDLSAEKKFRIKSVTEEEVGIGKDKERKLVVWFTNDSRG
Ga0306925_100332373	3300031890	Soil	MVLLASNYDQSKFLKAGDLPAERKFRIKSVTEEEVGIGKDKERKLVVWFTNDSHGLVLNRVNNRTIRGA
Ga0306925_111875982	3300031890	Soil	MVLLASTYDQSRFFKAEDLTTEKKLKIKHVREEEIGIGKDKEKKLVVYFTNDPRGLPLNRTNNRTLRGAFGDVCDGWAGKIIVLFPATAEYRGQIK
Ga0306925_112645011	3300031890	Soil	MALLASTYDQSKYLKAQDLAAEKKFRIKKVTEELIGAGNDKEKKLVVWFTNDERGLVLNRTNNRTIRG
Ga0306923_124024231	3300031910	Soil	MVLLASAYDQSRFFKAEDLTAEKKLKIKAVTEEEVGIGKDKEKKLVVWVTNDRRGLV
Ga0306921_102459141	3300031912	Soil	MTLLASTYDQSRFLKAEDLAAEKKFRIENVTEEIVGPDKEKKLVVRFTNDSR
Ga0306921_109625541	3300031912	Soil	MLLASAYDQSCYFKAADVQAAKKLRIKDVTEEEIGVGQDKQKKLVVWFDNDPRGLVLNKTNN
Ga0306921_113473811	3300031912	Soil	MVLLASSYDQSRFLKAADLEREKKFRIKGVTEEVIGTDEKEKKLVVWLTN
Ga0310912_110446712	3300031941	Soil	MVLLASNYDQSRFLKAEDLPAEKKFKIKLVTEEEIGIGKDKERKLVVWFTNDSRGLVLNRVNNR
Ga0310910_110189431	3300031946	Soil	MVLLASDYDKSNFLKANDLNGERKFRIKLVSEEDIGTGANKEKKLVAWFTNDDRGLVL
Ga0310910_110649181	3300031946	Soil	MVLLASNYDQSRFLKAEDLPAEKKFKIKLVTEEEIGIGKDKERKLVVWFTNDSRGLVL
Ga0310909_100805561	3300031947	Soil	MVLLASSFDQSKYFKAEDLTAEKKLKIKAVSAEDVGGGKDKERKLVVQFTNDKRALVLNRTNNRTI
Ga0310909_104541722	3300031947	Soil	MVLLASNYDQSKFLKAGDLPAERKFRIKSVTEEEVGIGKDKERKLVVWFTNDSHGLVLNRVNNRTIRGAYGDVCDDWAGKIIAVFPTMA
Ga0310909_107760702	3300031947	Soil	MVLLASAYDQSRFLKAQDLTTEKKFRIKSVTEEEIGIGRDKERKLVVWFTNDER
Ga0306926_112781263	3300031954	Soil	MVLLASSFDQSRFLKAGDLTSEKKFRVKAVTEEDIGVGKDKQHKLVVWFTNDTRGLVRNRVNNRTIRGAFGDVC
Ga0306922_123392961	3300032001	Soil	MVLLASNYDQSRFLKAEDLPAEKKFKIKLVTEEEIGIGKDKERKLVVWFTNDSRG
Ga0318549_104066342	3300032041	Soil	MLLASAFDQSRYFKAADVQAEKKLRIKDVTVEEIGVGQDKEKKLVVSFDNDPRRLVLNKTNNRILRAAFGDDCA
Ga0306924_111466722	3300032076	Soil	MLLASAFDQSRYFKAADVQAEKKLRIKDVTVEEIGVGQDKEKKLVVSFDNDPRRLVLNKTNN
Ga0306924_117759312	3300032076	Soil	MVLLASSYDQSRFLKAADLEREKKVRIKSVTEELIGAEQKEKKLVVWFTNDERGLVLNKTNNR
Ga0306924_123271541	3300032076	Soil	MVLLASAYDQSRFLKAQDLTTEKKFRIKSVTEEEIGIGKDKERKLVVWFTNDDRGLVLNRVNNRTIRGAF
Ga0307471_1020232922	3300032180	Hardwood Forest Soil	MLLASAYDQSRYFKAADMQAPKKLRIKDVTEEEIGVGQDKEKKLCVWFTNDPRGLV
Ga0307472_1024847192	3300032205	Hardwood Forest Soil	MVLLASNYDQSRFLNAEHLTAEKKFRIKSVTEEEVGIGKDKERKLVVWFTNDAHGLA
Ga0306920_1016373072	3300032261	Soil	MVLLASSYDQSRFLKAADLEREKKFRIKGVTEEVIGTDEKEKKLVVWFTNDKRG
Ga0306920_1024719382	3300032261	Soil	MLLASNYDQGRFFKAADMATEKKLRIKDVTEETIGADNEKKLCVWFTNDRHGLILNKTNNRTLRGAFGDACEGWKGKIVVVFPTQDDFRGRL
Ga0306920_1026450481	3300032261	Soil	MVLLASAYDQSKFLKAEDLTTERKLKIRTVTEEQVGIGNDKEKKLVVWFTNDSRGLVLNRTNN
Ga0306920_1030270082	3300032261	Soil	MVLLASAYDQSRFFNAGDLPTEKKLKIKAVTEEEIGIGKDKEKKLVVWFTNDPRGLVLNR
Ga0306920_1034403322	3300032261	Soil	MTLLASTYDQSRFLKAEDLAAEKKFRIKNVTEEIVGADKEKKLVVWFTNDSRGLVLNKTNNRTIRKE
Ga0310914_108351721	3300033289	Soil	MVLLASSYDQTRWLKATDLTAEKKFRIKTVTVEEIGMGKDKETKLVVWFTNDPRGLVLNRVNNRTLRGTFGDDTAGW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081933

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences