Metagenome / Metatranscriptome Family F081852

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081852
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	115 residues
Representative Sequence	WYGSRFIIEFRRGGQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDERARDRYLAQGRQVTAAYDPDHDIWFRYRDERDLDAWFGLLPVLLPGVLDAVRLRLG
Number of Associated Samples	97
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.16 %
% of genes near scaffold ends (potentially truncated)	83.33 %
% of genes from short scaffolds (< 2000 bps)	87.72 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.632 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.912 % of family members)
Environment Ontology (ENVO)	Unclassified (23.684 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.474 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.86% β-sheet: 5.44% Coil/Unstructured: 51.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF04978	DUF664	2.63
PF12680	SnoaL_2	1.75
PF00903	Glyoxalase	1.75
PF12681	Glyoxalase_2	1.75
PF00176	SNF2-rel_dom	1.75
PF13358	DDE_3	0.88
PF13193	AMP-binding_C	0.88
PF13450	NAD_binding_8	0.88
PF02518	HATPase_c	0.88
PF00933	Glyco_hydro_3	0.88
PF06197	DUF998	0.88
PF13404	HTH_AsnC-type	0.88
PF13480	Acetyltransf_6	0.88
PF08240	ADH_N	0.88
PF13340	DUF4096	0.88
PF08386	Abhydrolase_4	0.88
PF01568	Molydop_binding	0.88
PF07690	MFS_1	0.88
PF02702	KdpD	0.88
PF03704	BTAD	0.88
PF11774	Lsr2	0.88
PF02594	DUF167	0.88
PF00248	Aldo_ket_red	0.88
PF07110	EthD	0.88
PF00890	FAD_binding_2	0.88
PF00557	Peptidase_M24	0.88
PF13826	DUF4188	0.88
PF00596	Aldolase_II	0.88
PF01966	HD	0.88
PF13602	ADH_zinc_N_2	0.88
PF00293	NUDIX	0.88
PF00496	SBP_bac_5	0.88
PF01642	MM_CoA_mutase	0.88
PF12831	FAD_oxidored	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.88
COG1872	Uncharacterized conserved protein YggU, UPF0235/DUF167 family	Function unknown [S]	0.88
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	0.88
COG2205	K+-sensing histidine kinase KdpD	Signal transduction mechanisms [T]	0.88
COG3371	Uncharacterized membrane protein	Function unknown [S]	0.88
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.88
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.88

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.63 %
Unclassified	root	N/A	47.37 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.63 %
Unclassified	root	N/A	47.37 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.63 %
Unclassified	root	N/A	47.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.75 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	27.19 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.75 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.26 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	3.51 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.63 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	1.75 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.75 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.75 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.88 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.88 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	3.51 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3.51 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.63 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	1.75 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.75 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.88 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	3.51 %
unclassified Pseudonocardiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae	2.63 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	1.75 %
Actinospica	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	1.75 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.75 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.88 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	0.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.51 %
Pseudonocardiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae → Pseudonocardiaceae bacterium	2.63 %
Actinospica robiniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	1.75 %
Sphingomonas sp. PAMC 26617	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. PAMC 26617	1.75 %
Nocardia vaccinii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia vaccinii	0.88 %
Streptomyces cacaoi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces cacaoi	0.88 %
Thermomonospora echinospora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora echinospora	0.88 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.88 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_116847589	Not Available	513	Open in IMG/M
3300001867\|JGI12627J18819_10454881	Not Available	524	Open in IMG/M
3300004091\|Ga0062387_100807185	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300004635\|Ga0062388_102306214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. PAMC 26617	562	Open in IMG/M
3300005327\|Ga0070658_10037514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3907	Open in IMG/M
3300005329\|Ga0070683_101141484	Not Available	749	Open in IMG/M
3300005341\|Ga0070691_10436312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300005345\|Ga0070692_10442437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae → Pseudonocardiaceae bacterium	830	Open in IMG/M
3300005366\|Ga0070659_101120666	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300005434\|Ga0070709_10825829	Not Available	729	Open in IMG/M
3300005434\|Ga0070709_11780095	Not Available	504	Open in IMG/M
3300005436\|Ga0070713_100967091	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300005455\|Ga0070663_100651881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae → Pseudonocardiaceae bacterium	890	Open in IMG/M
3300005534\|Ga0070735_10930309	Not Available	510	Open in IMG/M
3300005538\|Ga0070731_10395947	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300005547\|Ga0070693_101305160	Not Available	561	Open in IMG/M
3300005548\|Ga0070665_100220988	All Organisms → cellular organisms → Bacteria	1895	Open in IMG/M
3300005614\|Ga0068856_102612764	Not Available	511	Open in IMG/M
3300005616\|Ga0068852_101306073	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005618\|Ga0068864_102158709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. PAMC 26617	563	Open in IMG/M
3300010049\|Ga0123356_10817797	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300010358\|Ga0126370_12620011	Not Available	504	Open in IMG/M
3300010366\|Ga0126379_11120590	Not Available	893	Open in IMG/M
3300010371\|Ga0134125_11796123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	667	Open in IMG/M
3300010379\|Ga0136449_101431806	Not Available	1064	Open in IMG/M
3300010379\|Ga0136449_101650740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	970	Open in IMG/M
3300010401\|Ga0134121_11601488	Not Available	671	Open in IMG/M
3300010876\|Ga0126361_10497959	Not Available	578	Open in IMG/M
3300010876\|Ga0126361_10863242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1742	Open in IMG/M
3300010877\|Ga0126356_10512293	Not Available	560	Open in IMG/M
3300010937\|Ga0137776_1248847	Not Available	622	Open in IMG/M
3300012207\|Ga0137381_10890680	Not Available	770	Open in IMG/M
3300012359\|Ga0137385_11001623	Not Available	689	Open in IMG/M
3300012925\|Ga0137419_10630792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	863	Open in IMG/M
3300012955\|Ga0164298_10357741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae → Pseudonocardiaceae bacterium	927	Open in IMG/M
3300013105\|Ga0157369_10118701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	2807	Open in IMG/M
3300013307\|Ga0157372_11400385	Not Available	806	Open in IMG/M
3300016294\|Ga0182041_10734734	Not Available	878	Open in IMG/M
3300016319\|Ga0182033_11702702	Not Available	571	Open in IMG/M
3300017926\|Ga0187807_1298877	Not Available	534	Open in IMG/M
3300017942\|Ga0187808_10333526	Not Available	687	Open in IMG/M
3300017943\|Ga0187819_10085556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora echinospora	1881	Open in IMG/M
3300017948\|Ga0187847_10611798	Not Available	609	Open in IMG/M
3300017970\|Ga0187783_11078120	Not Available	579	Open in IMG/M
3300018044\|Ga0187890_10810325	Not Available	530	Open in IMG/M
3300020075\|Ga0206349_1045696	Not Available	868	Open in IMG/M
3300020082\|Ga0206353_11535975	Not Available	1179	Open in IMG/M
3300020140\|Ga0179590_1170275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	597	Open in IMG/M
3300021086\|Ga0179596_10137287	Not Available	1152	Open in IMG/M
3300021168\|Ga0210406_11089213	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300021181\|Ga0210388_11388268	Not Available	590	Open in IMG/M
3300021402\|Ga0210385_10685542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	784	Open in IMG/M
3300021402\|Ga0210385_10995672	Not Available	644	Open in IMG/M
3300021403\|Ga0210397_10253734	Not Available	1278	Open in IMG/M
3300021404\|Ga0210389_10004327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	11040	Open in IMG/M
3300021404\|Ga0210389_10366131	Not Available	1133	Open in IMG/M
3300021404\|Ga0210389_10474189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	985	Open in IMG/M
3300021406\|Ga0210386_10015981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5852	Open in IMG/M
3300021474\|Ga0210390_11477796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300021477\|Ga0210398_10848888	Not Available	734	Open in IMG/M
3300021479\|Ga0210410_11466273	Not Available	575	Open in IMG/M
3300022467\|Ga0224712_10103064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1213	Open in IMG/M
3300022529\|Ga0242668_1154927	Not Available	506	Open in IMG/M
3300025906\|Ga0207699_10637815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	777	Open in IMG/M
3300025906\|Ga0207699_11372348	Not Available	523	Open in IMG/M
3300025912\|Ga0207707_10914141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	725	Open in IMG/M
3300025912\|Ga0207707_10963893	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300025916\|Ga0207663_11013023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	666	Open in IMG/M
3300025917\|Ga0207660_10979853	Not Available	690	Open in IMG/M
3300025928\|Ga0207700_10196159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1699	Open in IMG/M
3300026035\|Ga0207703_11675634	Not Available	612	Open in IMG/M
3300026116\|Ga0207674_11947317	Not Available	553	Open in IMG/M
3300026142\|Ga0207698_11442061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300026273\|Ga0209881_1000756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7864	Open in IMG/M
3300027158\|Ga0208725_1071734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504	Open in IMG/M
3300027537\|Ga0209419_1038078	Not Available	919	Open in IMG/M
3300027857\|Ga0209166_10282390	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300027882\|Ga0209590_10019833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces cacaoi	3370	Open in IMG/M
3300028379\|Ga0268266_10204574	Not Available	1808	Open in IMG/M
3300028573\|Ga0265334_10303534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	546	Open in IMG/M
3300028800\|Ga0265338_11161971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	518	Open in IMG/M
3300028877\|Ga0302235_10016380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4195	Open in IMG/M
3300028877\|Ga0302235_10384586	Not Available	602	Open in IMG/M
3300029636\|Ga0222749_10632317	Not Available	585	Open in IMG/M
3300029951\|Ga0311371_11128175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	915	Open in IMG/M
3300030007\|Ga0311338_11426168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	643	Open in IMG/M
3300030520\|Ga0311372_10007736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24169	Open in IMG/M
3300030520\|Ga0311372_11021271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1088	Open in IMG/M
3300030617\|Ga0311356_10395552	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300030739\|Ga0302311_10660637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	695	Open in IMG/M
3300030739\|Ga0302311_10887306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	572	Open in IMG/M
3300030906\|Ga0302314_10943464	All Organisms → cellular organisms → Bacteria → Terrabacteria group	841	Open in IMG/M
3300031234\|Ga0302325_10099083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5467	Open in IMG/M
3300031234\|Ga0302325_13336672	Not Available	508	Open in IMG/M
3300031236\|Ga0302324_100133340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4115	Open in IMG/M
3300031525\|Ga0302326_10322061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia vaccinii	2453	Open in IMG/M
3300031525\|Ga0302326_10854731	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1302	Open in IMG/M
3300031549\|Ga0318571_10294524	Not Available	609	Open in IMG/M
3300031708\|Ga0310686_104034649	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300031708\|Ga0310686_109752337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5686	Open in IMG/M
3300031708\|Ga0310686_115290516	Not Available	1021	Open in IMG/M
3300031715\|Ga0307476_10329316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1122	Open in IMG/M
3300031715\|Ga0307476_11278859	Not Available	536	Open in IMG/M
3300031718\|Ga0307474_10627592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	847	Open in IMG/M
3300031719\|Ga0306917_11494056	Not Available	520	Open in IMG/M
3300031823\|Ga0307478_10367988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1186	Open in IMG/M
3300031890\|Ga0306925_11866699	Not Available	573	Open in IMG/M
3300031959\|Ga0318530_10438448	Not Available	542	Open in IMG/M
3300032039\|Ga0318559_10451688	Not Available	600	Open in IMG/M
3300032895\|Ga0335074_10024668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8480	Open in IMG/M
3300032898\|Ga0335072_10113606	Not Available	3424	Open in IMG/M
3300032898\|Ga0335072_10693597	Not Available	998	Open in IMG/M
3300033134\|Ga0335073_11313983	Not Available	714	Open in IMG/M
3300034124\|Ga0370483_0243019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.96%
Host-Associated	Host-Associated	14.04%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.95%
Plants	Host-Associated → Plants	13.16%
Aquatic	Environmental → Aquatic	7.02%
Arthropoda	Host-Associated → Arthropoda	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.79%
Peat	Environmental → Terrestrial → Peat	13.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.89%
Freshwater	Environmental → Aquatic → Freshwater	6.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.26%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.88%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.74%
Loam	Environmental → Terrestrial → Soil → Loam	14.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.14%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.75%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.88%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.14%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.51%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.75%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.88%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.91%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.51%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.51%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.51%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.51%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.51%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.63%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.75%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.75%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.75%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.88%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.88%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1168475892	3300000956	Soil	DDEGRERVRAVQNAVIRRLPPAPARVLRMLDDRARDRYLAQGRPVTAAYQPDHDIWFRYRDERDLDAWFRLLPGLLPGVLGAVRNRLG*
JGI12627J18819_104548812	3300001867	Forest Soil	GRERVRAVQNAVIRRLPPAPARALRALDDRARDSYLAQGRQVTAAYEPEDDIWFRYRDERDLDAWFRLLPVLLPGVLGAVRLRLG*
Ga0062387_1008071851	3300004091	Bog Forest Soil	PRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRILDDRARDEYLAQGKQVATAYSPDHDVWFRYRDERDLDAWFRLLPVLLPGVLEAVRVRLG*
Ga0062388_1023062141	3300004635	Bog Forest Soil	AGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARALRVLDDRARDEYLAQGKQVATAYSPDHDVWFRYRDERDLDAWFRLLPVLLPGVLEAVRVRLG*
Ga0070658_100375145	3300005327	Corn Rhizosphere	VAWVQPTRSPDALGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDDRARDWYLAQGRQVTAAYEPDHDIWFRYRDERDLDTWFRLLPGLLPGVLDAVRRRLG*
Ga0070683_1011414841	3300005329	Corn Rhizosphere	QEFVVAWVQPTRSPDASGWYGSRFVIEFRRGAWPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRALDEPAREAYLAQGRQVTGAYGPDHDIWFRYRDERDLGAWFRLLPGLLPGVLGAVRNRLG*
Ga0070691_104363121	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	RFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRTLDDRARDRYLAQGRQVTAAYEPDHDIWFRYRDERDLDIWFRLLPGLLPGVLDAVRRRLG*
Ga0070692_104424372	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	QEFVVAWVQPTRSPDTSGWYGSRFVIEFRRGAWPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPPPARVLRALDEPAREAYLAQGRQVTRAYGPDHDIWFRYRDERDLGAWFRLLPVLLPGVLGAARRRLG*
Ga0070659_1011206662	3300005366	Corn Rhizosphere	RSPDALGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDDRARDWYLAQGRQVTAAYEPDHDIWFRYRDERDLDIWFRLLPGLLPGVLDAVRRRLG*
Ga0070709_108258291	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	EFVVAWVQPTRSPDVSGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDAGRERVRAVQNAVIRRLPPAPAHVVRSLDERARELYLAQGRPVTAAYSPAHDVWFRYRDERDLDVWFGLLPALLPGVLGAVRLRLG*
Ga0070709_117800951	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GVLGPGFRFCELLDDAGRERVRAVQNAVIRRLPTPPGRVLRSLDEQAREAYLAQGRQVTTAYLPSHDVWFRYRDERDLDAWFGLLPVLLPGVLGAARLRLG*
Ga0070713_1009670913	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LDDQGRERVRAVQNAVIGRLPPAPARVLRTLDAPAREMYLAHGRQVTAPYGPDHDIWFRYRDERDLGTWFRLLPVLLPGVLDAARRRLG*
Ga0070663_1006518812	3300005455	Corn Rhizosphere	EFVVAWVQPTRSPDTSGWYGSRFVIEFRRGAWPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPPPARVLRALDEPAREAYLAQGRQVTRAYGPDHDIWFRYRDERDLGAWFRLLPVLLPGVLGAARRRLG*
Ga0070735_109303091	3300005534	Surface Soil	RGAQPRAGVLGPGFRFGQLLGDGGRERVRAVQNTVIRRLPPAPARVLRTLDEHAREVYLAQGRQVAAAYGPDHDIWFRYRDERDLDAWFRLLPVLLPGVLSEARRRLG*
Ga0070731_103959472	3300005538	Surface Soil	MGPGFRFCQLLDDEGREQVRAVQNAVIRRMPPAPARVLRMSDDRARDWYLAQGRQVVAAYSPDHDIWFRYRDEHDLDAWFRLLPMLLTGVLDAVRLRLG*
Ga0070693_1013051601	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VQPTRSPDALGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDDRARDRYLAQGRPVTAAYQPDHDIWFRYRDERDLDAGFRLLPGLLPGVLGAVRNRLG*
Ga0070665_1002209882	3300005548	Switchgrass Rhizosphere	VQPTRNPDALGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDDRARDRYLAQGRPVTAAYQPDHDIWFRYRDERDLDAWFRLLPGLLPGVLGAVRNRLG*
Ga0068856_1026127641	3300005614	Corn Rhizosphere	RPTGQEFVVAWVQPTRSPDASGWYGSRFIIELRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRALDERAREAYLAHGRQVTAAYGPGHDVWFRYRDERDLDAWFRLLRVLLPGVLAAVRLRLG*
Ga0068852_1013060732	3300005616	Corn Rhizosphere	GREFVVAWVQPTRSPDALGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDDRARDWYLAQGRQVTAAYEPDHDIWFRYRDERDLDTWFRLLPGLLPGVLDAVRRRLG*
Ga0068864_1021587091	3300005618	Switchgrass Rhizosphere	EFVVAWVQPTRSPDALGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDDRARDRYLAQGRPVTAAYQPDHDIWFRYRDERDLDAWFRLLPGLLPGVLGAVRNRLG*
Ga0123356_108177973	3300010049	Termite Gut	SRFIIEFRRGAQPRSGVLGPGFRFCQLLDDAGRERVRAVQNAVIRRMPPAPAAVLRAIDERARDAYLAQGRQVTAAYGPDHDVWFRYRDERDLGAWFRLLPALLPGVLGAVQLRLG*
Ga0126370_126200111	3300010358	Tropical Forest Soil	TRSPDASGWYGSRFIIELRRGAQPRAGVLGPGFRFCQLLDDAGRERVRAVQNAVIRRLPPPPPRVLRTLDERARDVYLAQGRQVAAAYGPDHDIWFRYRDERDLGAWLRLLPVLLPGVLRAARLRLGQA*
Ga0126379_111205901	3300010366	Tropical Forest Soil	QPRAGVLGPGFRFCRLLEDEGRERVRAVQNAVIKRLPPAPERVLRTLDERERESYLAHGRQVTAPYAPDHDIWFRYRDERDLDAWFRLLAVLLPGVLGAVRLRLG*
Ga0134125_117961232	3300010371	Terrestrial Soil	GRERVRAVQNAVIRRLPPAPARVLRMLDDRARDRYLAQGRQVTAAYEPEDDIWFRYRDERDLDAWFRLLRVLLPGVLAAVRLRLG*
Ga0136449_1014318061	3300010379	Peatlands Soil	CQLLDDAGRERVRAVQNMVIRRLPPAPARVLRTLDERARDAYLAQGRLVSTAYAPGQDIWFRYRDERDLDAWFRLLRVLLPGVLGAARQRLG*
Ga0136449_1016507402	3300010379	Peatlands Soil	DEGRERVRAVQNAVIRRLPPAPARVLRALDERARDAYLAHGRQVAAPYGPDHDVWFRYRDERDLGAWFRLLPVLLPGVLGAARRRLE*
Ga0134121_116014881	3300010401	Terrestrial Soil	IIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDDRARDRYLAQGRPVTAAYQPDHDIWFRYRDERDLDAWFRLLPGLLPGVLGAVRNRLG*
Ga0126361_104979591	3300010876	Boreal Forest Soil	DASGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDKERERVRAVQNAVIRRLPPAPVRVLRTLDNQARDRYLAQGRQVTAPYGPDQDVWFRYRDERDLNAWFRLLPVLLPGVLGVVRLRLG*
Ga0126361_108632423	3300010876	Boreal Forest Soil	RRGAQPSAGVLGPGFRFCQLLDDEGRERVRAAQNAVIRRLPPVPARVLRGLDDQARDRYLAQGRQVTAAYGPDQDVWFRYRDERDVDAWFRLLPVLLPGVLGAVRLRLG*
Ga0126356_105122932	3300010877	Boreal Forest Soil	IIEFRRGAQPRSGVLGPGFRFCQLLDDAGRERVRAVQNAVIRRLPPVPARVVRTLDDGARDWYLAQGKQVTAPYGPEEDIWFRHRDERDLDAWFRLLPVLLPGALRAVQLRLG*
Ga0137776_12488472	3300010937	Sediment	YGSRFIIEFRRGAQPRAGVLGPGSRFCQLLSDEGRERVRAVQNAVIKRLPPPPVPVLRTLDEPAREVYLAQGRQVTAPYAPDHDIWFRYRDERDLDAWFRLLPVLLPGVLGAVRLRLG*
Ga0137381_108906801	3300012207	Vadose Zone Soil	VGKEFVGAWVQPTRSPDVYGWYGSRFIIEFRRGAQPRVGVMGPGFRFCQLLGDEGREQVRAVQNAVIRRLPPAPARVLRMLDDRTRDWYLAQGMQVTEAYGPDYDIWFRHRDERDLDAWFRLLPVLLPGVLDAVRRRVG*
Ga0137385_110016231	3300012359	Vadose Zone Soil	VLGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLGDEGREQVRAVQNAVIRRLPPAPARVLRMLDDRTRDWYLAQGKQVTTAYGPDHDIWFRHRDEHDLDAWFRLLPVLLPDVLGAVRLRLG*
Ga0137419_106307921	3300012925	Vadose Zone Soil	QLLDDEGRERVRAVQNAVIRRLPPVPARVLRTLDDRARDAYLAHGKQVTAPYSADHDIWFRHRDERDLDAWFQLLPVLLPGVLVAVQLRLG*
Ga0164298_103577412	3300012955	Soil	EFVVAWVQPTRSPDASGWYGSRFVIESRRGAWPRAGVLAPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRALDERAREAYLAQGRQVTGAYGPDHDIWFRYRDERDLGAWFRLLPVLLPGVLGAARRRLG*
Ga0157369_101187013	3300013105	Corn Rhizosphere	QPTRSPDALGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDDRARDWYLAQGRQVTAAYEPDHDIWFRYRDERDLDTWFRLLPGLLPGVLDAVRRRLG*
Ga0157372_114003851	3300013307	Corn Rhizosphere	VLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRALDERAREAYLAHGRQVTAAYGPGHDVWFRYRDERDLDAWFRLLPVLLPGVLGAVRRRLG*
Ga0182041_107347342	3300016294	Soil	FIIEFRRGAPPRAGVLGPGLRFCQLLDDEGRERVRAVQNAVISRLPPAPARVLRALDERARDRYLAQGRPVTAAYGPDHDVWFRYRDERDLDAWFGLLAVLLPGVLGAVRVRLG
Ga0182033_117027021	3300016319	Soil	GVLGPGSRFCQLLDDAGRERVRAVQNAVIGRLPPAPGQVLRTLDERARDRYLAQGRPVTAAYGPDHDVWFRYRDERDLDAWFGLLAVLLPGVLGAVRVRLG
Ga0187807_12988771	3300017926	Freshwater Sediment	LPLRALSAARRRYGSRFSIEFRRGAQPRAGVLGPGVRFCQLLDDEGRERVRAVQNAVIRRLRPAPARVLRMLDERARDRYLAQGRQVPVAYDPDHDIWFRFRDEHDLGAWFRLLPVLLPGVL
Ga0187808_103335261	3300017942	Freshwater Sediment	QPTRSPDASGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLGDEGREQVRAVQNAVIRRLPPAPARVLRMLDDRTRDWYLAQGKQVTAAYSPHHDIWFRHRDQYDLDTWFRLLPVLLPGVLDAVQLRLG
Ga0187819_100855564	3300017943	Freshwater Sediment	RSPDAYGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLGDEGREQVRAVQNAVIRRLPPAPERVLRMLDDRTRDWYLAQGKQVTAAYSPHHDIWFRHRDQYDLDTWFRLLPVLLPGVLDAVQLRLG
Ga0187847_106117981	3300017948	Peatland	FVVAWVQPTRSPDAFGWYGSRFIIEIRRGAQPMAGVLGPGFRFCQLLDDEGREQVRAVQNAVIRRLPPAPARVLRTLDDRARASYLALGKQVTAAYTPDHDIWFRHRDERDLDAWFQLLPALLPGVLGAARLRLG
Ga0187783_110781201	3300017970	Tropical Peatland	VQPTRSPDASGWYGSRFIIEFRRGAQPRTGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRTLDERARDVYLAQGRPVTAAYDPGHDIWFRYRDERDLNAWFRLLPVLLPGVLGATRLRLG
Ga0187890_108103251	3300018044	Peatland	WYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRILDDRARDEYLAQGKQVATAYSPDHDVWFRYRDERDLDAWFRLLPVLLPGVLEAVRLRLG
Ga0206349_10456961	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	QEFVVAWVQPTRSPDALGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDDRARDWYLAQGRQVTAAYEPDHDIWFRYRDERDLDAWFRLLPVLLPGVLGAARLRLG
Ga0206353_115359751	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	VAWVQPTRSPDALGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDDRARDRYLAQGRPVTAAYQPDHDIWFRYRDERDLDAWFRLLPGLLPGVL
Ga0179590_11702752	3300020140	Vadose Zone Soil	GRERVRAAQNAVIRRLPPAPAGVLRTLDDRARDWYLAQGRPVTAPYAADHDIWFRYRDERDLDAWFRLLPVLLPGVLGAVRRRLG
Ga0179596_101372872	3300021086	Vadose Zone Soil	WYGSRFIIEFRRGAQPSAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPVPARVLRGLDDQARDRYLAQGRQVTAAYGPDQDVWFRYRDERDLDAWFRLLPVLLPGVLGAVRLRLG
Ga0210406_110892131	3300021168	Soil	RVGVMGPGFRFCHLLDDEGREQVRAVQNAVITRLPPAPARVLRMLDDRTRDWYLAQGRQVTAAYGPDHDIWFRHRDVYDLDAWFRLLPVLLPGVLDAVRLRLG
Ga0210388_113882681	3300021181	Soil	RSPDAFGWYGSRFIIEFRRGAQPMAGVLGPGFRFCQLLDDAGRERVRSVQNTVIRRLPPVPARVLRGLDERARAWYLAQGEQVTAPYRPDHDVWFRYRDERDLDAWFRLLPVLLPGVLDAVRQRLA
Ga0210385_106855421	3300021402	Soil	WYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNTVIRRLPPAPARVLRMLDERAREVYLAQGRQVTAAYGPDHDVWFRYRDERDLDAWFRLLPVLLPGVVGAARQRLG
Ga0210385_109956721	3300021402	Soil	LGPGFRFCQLLDDEARERVRAQQNVVIRRLPPAPARVLRTLDEQARNRYLAQGRQVAAPYGPDQDVWFRYRDERDLNAWFRLLPVLLPGVLRVVRLRLG
Ga0210397_102537342	3300021403	Soil	MGPGFRFCQLLDDEGREHVRAVQNAVIRRMPPAPARVLRMPDDRTRGWYLAQGRPVAAAYSPDHDIWFRYRDEHDLDAWFRLLPMLLPGVLDAVSLRLG
Ga0210389_100043279	3300021404	Soil	MGPGFRFCQLLDDEGREQVRVVQNAVIRRMPPAPARVLRMPHDRTRDWYLAQGRQVAAAYGPDHDIWFRHRDERDLDAWFRLLPVLLPGVLDAVRLRLG
Ga0210389_103661312	3300021404	Soil	LLDGEGRERVRAVQNAVIRRLPPVPARVLRTLDDRARGDYLAQGKQVTAPYGPDHDVWFRYRDERDLDAWFRLLPVLLPGVLGTVKLRLG
Ga0210389_104741891	3300021404	Soil	WVQPTRHPDASGWYGSRFIIEFRRGAQPRAGVLGPGFRFCELLDDQGRERVRAVQNAVIRRLPPAPARVLRTLDAPARDSYLAQGRQVTAAYRPDQDIWFRYRDERDLDAWFRLLPVLLPGVLGAVRLRLG
Ga0210386_100159817	3300021406	Soil	GVLGPGSRFSQLLDDAGREQVRAVQNAVIRRLPPAPARVLRLLDDSARDSYLAQGKQVTRPYRPDDDIWFRYRDERDLDAWFRLLPALLPDVLGAVRLSLG
Ga0210390_114777962	3300021474	Soil	QLTRSPDAFGWYGSRFIIEFRRGAEPRAGVLGPGFRFCQLLDDRGRERVRAVQNALIRRLPPPPARVLRMLDDHARECYLAQGRQVTAAYGPDDDIWFRHRDERDLDAWFRLLPVLLPGVLDAVQRRLG
Ga0210398_108488882	3300021477	Soil	MGPGYRFCQLLADEGREQVRAVQNAVIRRLPPAPARVLRMLDDRTRDWYLAQGKQVTEAYGPDHDIWFRYRDEHDLDAWFRLLPVLLPGVLDAVRMRL
Ga0210410_114662732	3300021479	Soil	KFIIEFRRGAQPRAGVLGPGFRFCQLLGNEGREQVRAVQNAVIRRLPPAPARVLRTLDDRARDMYLAQGRLVTAPYRPDQDIWFRHRDEHDLDTWFRLLPVLLPGVLDAVKLRLG
Ga0224712_101030641	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	VAWVQPTRSPDALGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDDRARDWYLAQGRQVTAAYEPDHDIWFRYRDERDLDTWFRLLPGLLPGVLDAVRRRLG
Ga0242668_11549272	3300022529	Soil	QRPAGEEFVVAWVQPTRLPDALGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLVDDEARGRVRAVQNAVIRRLPPAPARVLRTLDERARDSYLAQGKQVMAAYRPDGDIWFRHRDERDLDAWFRLLPVLLPGVLDAVKLRLG
Ga0207699_106378151	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	EFVVAWVQPTRSPDASGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDAGRERVRAVQNAVIRRLPPAPAHVVRSLDERARELYLAQGRPVTAAYSPAHDVWFRYRDERDLDVWFGLLPALLPGVLGAVRLRLG
Ga0207699_113723481	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	SGWYGSRFIIEFRRGAVPRAGVLGPAFRFCELLDSAGRERVRAVQNAVIRRLPPPPARVLRSLDKQAREAYLAQGRQVTTAYLPSHDVWFRYRDERDLDAWFGLLPVLLPGVLGAARLRL
Ga0207707_109141411	3300025912	Corn Rhizosphere	LGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDDRARDRYLAQGRQVTAAYEPEDDIWFRYRDERDLDAWFRLLRVLLPGVLAAVRLRLG
Ga0207707_109638932	3300025912	Corn Rhizosphere	PRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRALDEPAREAYLAQGRQVTGAYGPDHDIWFRYRDERDLGAWFRLLPVLLPGVLGAARRRLG
Ga0207663_110130231	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AGVLGPGFRFCQLLDDAGRERVRAVQNAVIRRLPPAPAHVVRSLDERARELYLAQGRPVTAAYSPAHDVWFRYRDERDLDVWFGLLPALLPGVLGAVRLRLG
Ga0207660_109798531	3300025917	Corn Rhizosphere	RGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDDRARDRYLAQGRPVTAAYQPDHDIWFRYRDERDLDAWFRLLPGLLPGVLGAVRNRLG
Ga0207700_101961591	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VQPTRSPDASGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDAGRERVRAAQNAVIRRLPPAPAHVVRSLDERARELYLAQGRPVTAAYSPAHDVWFRYRDERDLDVWFGLLPALLPGVLGAVRLRLG
Ga0207703_116756341	3300026035	Switchgrass Rhizosphere	VQPTRNPDVTGWYGSRFVIEFRRGAQPRAGVLGPGFRFCQLLDDHGRERVRAVQNAVIGRLPPAPARVLRTLDERAREVYLAHGRQVTAPYGPDQDVWFRYRDERDLGTWFRLLPVLLPGVLDAARRRLG
Ga0207674_119473171	3300026116	Corn Rhizosphere	REFVVAWVQPTRSPDALGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDDRARDRYLAQGRPVTAAYQPDHDIWFRYRDERDLDAWFRLLPGLLPGVLGAVRNRLG
Ga0207698_114420611	3300026142	Corn Rhizosphere	PDALGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDDRARDWYLAQGRQVTAAYEPDHDIWFRYRDERDLDTWFRLLPGLLPGVLDAVRRRLG
Ga0209881_10007568	3300026273	Soil	VLGPGFRFCQLLEDEGREQVRAVQNAVIRRLPPAPARVLRRLDDRARDWYLAQGKQVTAAYSADHDIWFRYRDERDLDAWFQLLPVLLPGVLDAVLIRLA
Ga0208725_10717342	3300027158	Forest Soil	FRRGAEPRAGVLGPGFRFCQLLDDGGRERVRAVQNALIRRLPPPPARVLRMLDDHARECYLAQGRQVTAAYGPDDDIWFRHRDERDLDAWFRLLPVLLPGVLDAVQRRLG
Ga0209419_10380782	3300027537	Forest Soil	VVAWVQPTRSPDAFGWYGSRFIIEFRRGAQPSAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPVPARVLRGLDDQARDRYLAQGRQVTAAYGPDQDVWFRYRDERDVDAWFRLLPVLLPGVLGAVRLRLG
Ga0209166_102823902	3300027857	Surface Soil	MGVLGPGSRFCQLLDDEGRERVRAVQNTVIRRLPPAPAAVLRTLDERARDRYLAHGRQVTAPYAPDHDIWFRYRDERDLDAWFRLLPVLLPGVLETVRLGLG
Ga0209590_100198332	3300027882	Vadose Zone Soil	MGPGFRFCQLLGDEGREQVRAVQNAVIRRLPPAPARVLRMLDDRTRDWYLAQGKQVTTAYGPDHDIWFRHRDEHDLDAWFRLLPVLLPGVLDEVRLRLG
Ga0268266_102045741	3300028379	Switchgrass Rhizosphere	QPTRNPDALGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDDRARDRYLAQGRPVTAAYQPDHDIWFRYRDERDLDAWFRLLPGLLPGVLGAVRNRLG
Ga0265334_103035342	3300028573	Rhizosphere	VLGPGFRFCQLLDAAGRERVRAAQNAMIRRLPPAPARVLRTLDQPAREAYLAQGRPVTAAYGPDQDIWFRYRDERDLDAWFRLLTVLLPGVLGAARLRLG
Ga0265338_111619711	3300028800	Rhizosphere	LLDAAGRERVRAAQNAMIRRLPPAPARVLRTLDQPAREAYLAQGRPVTAAYGPDQDIWFRYRDERDLDAWFRLLTVLLPGVLGAARLRLG
Ga0302235_100163803	3300028877	Palsa	VGPEFAVGWVQPTRSPDAFGWYGSRFIIEFRRGAEPRAGVLGPGFRFCELLDDEGRERVRAVQNAVIRRLPPAPAQVLRVLDDRARDEYLAQGRQVATAYSPDHDVWFRYRDERDLDDWFRLLPVLLPGVLEAVRLRLG
Ga0302235_103845861	3300028877	Palsa	VLGPGFRFCQLLDDEGREQVRAVQNAVIRRLPPAPARVLRTLDDRARDSYLAQGKQVTAAYTPDHDIWFRHRDERDLDAWFRLLPVLLPGVLGAARLRLG
Ga0222749_106323171	3300029636	Soil	RRPDALGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRGVQNAVIRRLPPAPARVLRILDDRARDEYLAQGKQVATAYSPDHDVWFRYRDERDLDSWFRLLPVLLPGVLGAARLRLG
Ga0311371_111281751	3300029951	Palsa	RSPDAYGWYGSRFIIEFRRGAQPRSGVLGPGFRFCQLLGDEGREQVRAVQNAVIRRLPPAPARVLGMLDDRTRDWYLAQGKQVTAAYSPHHDIWFRHRDEYDLDAWFRLLPVLLPGVLDAVRLRLG
Ga0311338_114261681	3300030007	Palsa	LTGQEFVVAWVQPTRSPDEFGWYGSRFIIEFRRGAPPRAGVLGPGFRFCQLLDADGRERVRAVQNVVIRRLPPPPSRVLRMLDGPARDAFLAQGRPVTTAYSADHDIWFRYRDERDLDAWFRLLPVLLPGVLEAVRLRLG
Ga0311372_1000773617	3300030520	Palsa	VLGSGFRFCQLLGDEGREQVRAVQNTVIRRLPPAPARVLRMLDDRTRDWYLAQGKQVTAAYSPHHDIWFRHRDEYDLDAWFRLLPVLLPGVLDAVQLRLG
Ga0311372_110212711	3300030520	Palsa	AGVLGPGFRFCQLLDDEGREQVRAVQNAVIRRLPPAPARVLRLLDDRGRDSYLALGKQVTAAYTPDHDIWFRYRDERDLDAWFQLLPVLLPGVLGAARLRLG
Ga0311356_103955522	3300030617	Palsa	VAWVQPTRSPDAFGWYGSRFIIEIRRGAQPRAGVLGPGFRFCQLLDDEGREQVRAVQNAVIRRLPPAPARVLRTLDDRARDSYLAQGKQVTAAYTPDHDIWFRHRDERDLDAWFRLLPVLLPGVLGAARLRLG
Ga0302311_106606372	3300030739	Palsa	PRSGVLGPGFRFCQLLGDEGREQVRAVQNAVIRRLPPAPARVLGMLDDRTRDWYLAQGKQVTAAYSPHHDIWFRHRDEYDLDAWFRLLPVLLPGVLDAVRLRLG
Ga0302311_108873061	3300030739	Palsa	DAFGWYGSRFIIEFRRGAQPAAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPPRVLRLLDDRARDRYLAQGKPVTTAYGPDHDVWFRYRDERDLDAWFRLFPVLLPGVLEAVRLRLG
Ga0302314_109434641	3300030906	Palsa	GRERVREVQNAVIRRLPPPPARVLRTLPGHARDRYLAHGRQVTSPYARDQDIWFRYRDERDLDSWFQLLPLQLPAVLSAVRRRLG
Ga0302325_100990836	3300031234	Palsa	GWYGSRFIIEFRRGAEPRVGVLGPGSRFCQLLDDAGRERVREVQNAVIRRLPPPPARVLRTLPGHARDRYLAHGRQVTSPYARDQDIWFRYRDERDLDSWFQLLPLQLPAVLGAVRRRLG
Ga0302325_133366722	3300031234	Palsa	AAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPPRVLRLLDDRARDRYLAQGKPVTTAYGPDHDVWFRYRDERDLDAWFRLFPVLLPGVLEAVRLRLG
Ga0302324_1001333401	3300031236	Palsa	AGVLGPGSRFCQLLDDAGRERVREVQNAVIRRLPPPPARVLRTLPGHARDRYLAHGRQVTAPYARDQDIWFRYRDERDLDSWFRLLPVQLPAVLGTVRRRLG
Ga0302326_103220613	3300031525	Palsa	IEFRRGAQPAAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPPRVLRLLDDRARDRYLAQGKPVTTAYGPDHDVWFRYRDERDLDAWFRLFPVLLPGVLEAVRLRLG
Ga0302326_108547311	3300031525	Palsa	VQPTRSPDASGWYGSRFIIEFRRGAEPRAGVLGPGSRFCQLLDDAGRERVREVQNAVIRRLPPPPARVLRTLPGHARDRYLAHGRQVTSPYARDQDIWFRYRDERDLDSWFQLLPLQLPAVLGAVRRRLG
Ga0318571_102945241	3300031549	Soil	GFRFCQLLDDDGRERVRAVQNAVIRRLPPAPAHVLRALGERARDAYLAQGRQVAAAYGPDDDIWFRYRDERDLDAWFGLLAVLLPGVLGAVRVRLG
Ga0310686_1040346492	3300031708	Soil	PGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPERVLRMLDDRARDSYLALGRPVTAAYAPDHDIWFRHRDERDLDAWFQLLPVLLPGVLGAARLRLG
Ga0310686_1097523375	3300031708	Soil	MGREFVVGWVQPTRSPDAFGWYGSRFIIEFRRGAQPRVGVLGPGFRFCQLLDDQGRERVRAVQNAVIRRLPPAPARVLRTLDDRAREGYLAQGRQVTAAYSPNHDIWFRHRDERDLDAWFRLLPVLLLGVLDAVRLRLG
Ga0310686_1152905162	3300031708	Soil	VAWVQPTRSPDVLGWYGSRFIIEFRRGVQPSAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPPPARALRMLDDRARDLYLAQGRQVTAAYGPDHDVWFRYRDGRDLDAWFRLLPVLLPGVLDAVRLRLG
Ga0307476_103293162	3300031715	Hardwood Forest Soil	WVQPTRSPDAFGWYGSRFIIEFRRGAQPMAGVLGPGFRFCQLLDDAGRERVRSVQNAVIRRLPPVPARVLRGLDDRTRAWYLAQGEQVTTPYSPDHDVWFRYRDERDLDAWFRLLPVLLPGVLSAVRQRLA
Ga0307476_112788592	3300031715	Hardwood Forest Soil	WSGSRFIIELRRGTQPRAGVLGPGFRFCQLLDAAGRERVRAAQNAMIRRLPPAPARVLRTLDEPARDAYLAQGRQVTAAYGPDQDIWFRYRDERDLDAWFRLLTALLPGVLGAARLRLG
Ga0307474_106275921	3300031718	Hardwood Forest Soil	RPAGHEFVVGWVQPTRSPDAFGWYGSRFIIEFRRGAQPMAGVLGPGFRFCQLLDDAGRERVRSVQNAVIRRLPPVPARVLRGLDDRTRAWYLAQGEQVTTPYSPDHDVWFRYRDERDLDAWFRLLPVLLPGVLSAVRQRLA
Ga0306917_114940561	3300031719	Soil	GWAGSRFIIEFRRGAPPRAGVLGPGLRFCQLLDDEGRERVRAVQNAVISRLPPAPARVLRALDERARDRYLAQGRPVTAAYGPDHDVWFRYRDERDLDAWFGLLAVLLPGVLGAVRVRLG
Ga0307478_103679882	3300031823	Hardwood Forest Soil	DAFGWYGSRFIIEFRRGAQPMAGVLGPGFRFCQLLDDAGRERVRSVQNTVIRRLPPVPARVLRGLDERTRAWYLAQGEQVTAPYRPDHDVWFRYRDERDLDAWFRLLPVLLPGVLDAVRRRLA
Ga0306925_118666991	3300031890	Soil	WYGSRFIIEFRRGGQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRMLDERARDRYLAQGRQVTAAYDPDHDIWFRYRDERDLDAWFGLLPVLLPGVLDAVRLRLG
Ga0318530_104384481	3300031959	Soil	RSPDASGWSGSRFIIEFRRGAPPRAGVLGPGLRFCQLLDDEGRERVRAVQNAVISRLPPAPARVLRTLDERARDRYLALGRPVTAAYGPDHDVWFRYRDERDLDAWFGLLAVLLPGVLGAVRVRLG
Ga0318559_104516881	3300032039	Soil	DASGWYGSRFIIEFRRGAQPRAGVLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPAPARVLRTLDERARDVYLAQGRQVAAAYGPDHDIWFRYRDERDLGAWFRLLPVLLPGVLGAVRLRLG
Ga0335074_100246685	3300032895	Soil	VLGPGSRFCQLLDDEGREQVRAVQNAVIRRLPPAPWPVLRTLDERARDRYLAHGRQVTAPYAPDHDIWFRYRDERDLDAWFRLLPVLLPGVLGAVRLRLGC
Ga0335072_101136061	3300032898	Soil	SGWYGSRFIIEFRRGAQPRTGVLGPGFRFCQLLDDEGRERVRVVQNAVIRRLPPAPARVLRLLDEPARDWYLAQGRQVTAAYDPDHDVWFRYRDERDLDAWFRLLPVLLPGVLGAVRLRL
Ga0335072_106935972	3300032898	Soil	VLGPGFRFCQLLDDEGRERVRAVQNAVIRRLPPPPARVVRLLDEPARGWYLAQGRQVTAAYDPDHDVWFRYRDERDLDAWFGLLPVLLPGVLGAVRLKLG
Ga0335073_113139832	3300033134	Soil	LLDDEGRERVRVVQNAVIRRLPPAPARVLRLLDEPARDWYLAQGRQVTAAYDPDHDVWFRYRDERDLDAWFRLLPVLLPGVLGAVRLRLG
Ga0370483_0243019_3_272	3300034124	Untreated Peat Soil	LDDEARERVRAVQNAVIRRLPPAPARVLRLLDDRARDRYLAQGKQVTTAYRPDHDIWFRYRDERDLEAWFRLLPALLPGVLGAVRLRLG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081852

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences