Metagenome Family F081851

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081851
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	62 residues
Representative Sequence	MKTQCLLRRNQFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRTRKTLILS
Number of Associated Samples	71
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	52.68 %
% of genes near scaffold ends (potentially truncated)	64.91 %
% of genes from short scaffolds (< 2000 bps)	88.60 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.263 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.965 % of family members)
Environment Ontology (ENVO)	Unclassified (66.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.158 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.00% β-sheet: 30.00% Coil/Unstructured: 60.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF11845	DUF3365	21.05
PF00072	Response_reg	4.39
PF13847	Methyltransf_31	2.63
PF13467	RHH_4	0.88
PF13545	HTH_Crp_2	0.88
PF05231	MASE1	0.88
PF05532	CsbD	0.88
PF07045	DUF1330	0.88
PF10423	AMNp_N	0.88
PF00211	Guanylate_cyc	0.88
PF02129	Peptidase_S15	0.88
PF03625	DUF302	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.88
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.88
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.88
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.88
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.88
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.88
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
All Organisms	root	All Organisms	44.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
cellular organisms	root	All Organisms → cellular organisms	44.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.72 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.89 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.63 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.51 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.63 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.75 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.88 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.75 %
unclassified Microvirga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga	0.88 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.75 %
Microvirga sp. KLBC 81	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. KLBC 81	0.88 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000688\|JGI12411J11895_101120	Not Available	598	Open in IMG/M
3300000729\|JGI12371J11900_1001298	Not Available	1802	Open in IMG/M
3300001867\|JGI12627J18819_10470158	Not Available	515	Open in IMG/M
3300005332\|Ga0066388_100845469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1501	Open in IMG/M
3300005332\|Ga0066388_101274935	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1264	Open in IMG/M
3300005332\|Ga0066388_102299543	Not Available	975	Open in IMG/M
3300005332\|Ga0066388_102427754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	951	Open in IMG/M
3300005332\|Ga0066388_103091884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	850	Open in IMG/M
3300005332\|Ga0066388_106263451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300005764\|Ga0066903_103327375	Not Available	868	Open in IMG/M
3300005764\|Ga0066903_107097540	Not Available	580	Open in IMG/M
3300005764\|Ga0066903_107509933	Not Available	562	Open in IMG/M
3300006041\|Ga0075023_100325331	Not Available	642	Open in IMG/M
3300006057\|Ga0075026_100548504	Not Available	672	Open in IMG/M
3300006057\|Ga0075026_100945056	Not Available	532	Open in IMG/M
3300010048\|Ga0126373_12552233	Not Available	570	Open in IMG/M
3300010049\|Ga0123356_10045554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4081	Open in IMG/M
3300010359\|Ga0126376_10167325	Not Available	1783	Open in IMG/M
3300010360\|Ga0126372_10086987	All Organisms → cellular organisms → Bacteria → Proteobacteria	2297	Open in IMG/M
3300010366\|Ga0126379_12919223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	572	Open in IMG/M
3300010376\|Ga0126381_100142033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3139	Open in IMG/M
3300010376\|Ga0126381_103967880	Not Available	576	Open in IMG/M
3300016270\|Ga0182036_10809366	Not Available	764	Open in IMG/M
3300016270\|Ga0182036_11816495	Not Available	516	Open in IMG/M
3300016270\|Ga0182036_11843344	Not Available	512	Open in IMG/M
3300016294\|Ga0182041_11338282	Not Available	656	Open in IMG/M
3300016319\|Ga0182033_11048824	Not Available	727	Open in IMG/M
3300016319\|Ga0182033_12103038	Not Available	515	Open in IMG/M
3300016341\|Ga0182035_11081366	Not Available	713	Open in IMG/M
3300016371\|Ga0182034_10690203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	867	Open in IMG/M
3300016371\|Ga0182034_10813442	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300016387\|Ga0182040_10493983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	977	Open in IMG/M
3300016387\|Ga0182040_10583910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	903	Open in IMG/M
3300016404\|Ga0182037_10129449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1870	Open in IMG/M
3300016404\|Ga0182037_10512483	Not Available	1007	Open in IMG/M
3300016404\|Ga0182037_11481315	Not Available	602	Open in IMG/M
3300016422\|Ga0182039_11704579	Not Available	576	Open in IMG/M
3300016422\|Ga0182039_11712450	Not Available	575	Open in IMG/M
3300016422\|Ga0182039_11900264	Not Available	547	Open in IMG/M
3300016422\|Ga0182039_11925956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300016445\|Ga0182038_11809342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300016445\|Ga0182038_12081776	Not Available	514	Open in IMG/M
3300017955\|Ga0187817_10584703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	712	Open in IMG/M
3300020581\|Ga0210399_10108123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → unclassified Microvirga → Microvirga sp. KLBC 81	2279	Open in IMG/M
3300021560\|Ga0126371_11324203	Not Available	853	Open in IMG/M
3300021560\|Ga0126371_12843284	Not Available	587	Open in IMG/M
3300026823\|Ga0207759_104617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1166	Open in IMG/M
3300026859\|Ga0207859_1021887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300026908\|Ga0207787_1014672	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300026945\|Ga0207743_1023843	Not Available	623	Open in IMG/M
3300026981\|Ga0207822_1024040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	658	Open in IMG/M
3300026990\|Ga0207824_1007975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1192	Open in IMG/M
3300026997\|Ga0207784_1005200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1524	Open in IMG/M
3300027039\|Ga0207855_1004317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2196	Open in IMG/M
3300027042\|Ga0207766_1018427	Not Available	790	Open in IMG/M
3300027680\|Ga0207826_1079624	Not Available	903	Open in IMG/M
3300031564\|Ga0318573_10461212	Not Available	684	Open in IMG/M
3300031573\|Ga0310915_10615630	Not Available	769	Open in IMG/M
3300031681\|Ga0318572_10411794	Not Available	804	Open in IMG/M
3300031682\|Ga0318560_10349055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	799	Open in IMG/M
3300031719\|Ga0306917_10968944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	664	Open in IMG/M
3300031723\|Ga0318493_10801569	Not Available	531	Open in IMG/M
3300031724\|Ga0318500_10701415	Not Available	516	Open in IMG/M
3300031744\|Ga0306918_10585466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	874	Open in IMG/M
3300031744\|Ga0306918_10707145	Not Available	788	Open in IMG/M
3300031744\|Ga0306918_10826315	Not Available	723	Open in IMG/M
3300031753\|Ga0307477_10015731	All Organisms → cellular organisms → Bacteria	5161	Open in IMG/M
3300031770\|Ga0318521_10815488	Not Available	569	Open in IMG/M
3300031771\|Ga0318546_10256116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1205	Open in IMG/M
3300031771\|Ga0318546_10545227	Not Available	815	Open in IMG/M
3300031781\|Ga0318547_10771949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300031799\|Ga0318565_10478674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300031805\|Ga0318497_10066684	Not Available	1886	Open in IMG/M
3300031833\|Ga0310917_10023865	Not Available	3547	Open in IMG/M
3300031833\|Ga0310917_10270954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1145	Open in IMG/M
3300031833\|Ga0310917_10592755	Not Available	753	Open in IMG/M
3300031833\|Ga0310917_10698851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	687	Open in IMG/M
3300031833\|Ga0310917_10919351	Not Available	588	Open in IMG/M
3300031845\|Ga0318511_10256655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	785	Open in IMG/M
3300031846\|Ga0318512_10528390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300031859\|Ga0318527_10506340	Not Available	515	Open in IMG/M
3300031890\|Ga0306925_10313294	Not Available	1687	Open in IMG/M
3300031890\|Ga0306925_10965686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	871	Open in IMG/M
3300031897\|Ga0318520_11081903	Not Available	508	Open in IMG/M
3300031910\|Ga0306923_10282052	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
3300031912\|Ga0306921_10268079	Not Available	2000	Open in IMG/M
3300031912\|Ga0306921_11780048	Not Available	663	Open in IMG/M
3300031912\|Ga0306921_12571582	Not Available	526	Open in IMG/M
3300031941\|Ga0310912_10925882	Not Available	670	Open in IMG/M
3300031941\|Ga0310912_11168169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300031942\|Ga0310916_10450295	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300031946\|Ga0310910_11064112	Not Available	631	Open in IMG/M
3300031946\|Ga0310910_11582965	Not Available	501	Open in IMG/M
3300031947\|Ga0310909_10652255	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300031954\|Ga0306926_10684285	Not Available	1245	Open in IMG/M
3300031954\|Ga0306926_12816577	Not Available	525	Open in IMG/M
3300031962\|Ga0307479_10027059	All Organisms → cellular organisms → Bacteria → Proteobacteria	5447	Open in IMG/M
3300032001\|Ga0306922_11065585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	830	Open in IMG/M
3300032001\|Ga0306922_11291032	Not Available	739	Open in IMG/M
3300032035\|Ga0310911_10350370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300032035\|Ga0310911_10401268	Not Available	793	Open in IMG/M
3300032041\|Ga0318549_10067238	Not Available	1514	Open in IMG/M
3300032055\|Ga0318575_10170932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1086	Open in IMG/M
3300032059\|Ga0318533_10645192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	777	Open in IMG/M
3300032261\|Ga0306920_100175872	Not Available	3192	Open in IMG/M
3300032261\|Ga0306920_100400002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2042	Open in IMG/M
3300032261\|Ga0306920_101079315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1165	Open in IMG/M
3300032261\|Ga0306920_101675264	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300032261\|Ga0306920_102251447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	756	Open in IMG/M
3300033289\|Ga0310914_11541000	Not Available	568	Open in IMG/M
3300033290\|Ga0318519_10494560	Not Available	736	Open in IMG/M
3300033290\|Ga0318519_10847210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.12%
Host-Associated	Host-Associated	0.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.61%
Aquatic	Environmental → Aquatic	3.51%
Arthropoda	Host-Associated → Arthropoda	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.61%
Sediment	Environmental → Aquatic → Sediment	2.63%
Freshwater	Environmental → Aquatic → Freshwater	0.88%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.32%
Loam	Environmental → Terrestrial → Soil → Loam	19.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.88%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	69.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.63%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.88%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	18.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.02%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.88%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000688	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 33	Environmental	Open in IMG/M
3300000729	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026823	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 19 (SPAdes)	Environmental	Open in IMG/M
3300026859	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 25 (SPAdes)	Environmental	Open in IMG/M
3300026908	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 77 (SPAdes)	Environmental	Open in IMG/M
3300026945	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 55 (SPAdes)	Environmental	Open in IMG/M
3300026981	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 67 (SPAdes)	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300026997	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 66 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027042	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12411J11895_1011202	3300000688	Tropical Forest Soil	MKTQCLLRRNAYHTTAWIDTDATKLGLLVAIPELGGLWEIVEIYSYRLTRKQLKTRKTLTVIF*
JGI12371J11900_10012981	3300000729	Tropical Forest Soil	LRRNAYHTTAWIDTDATKLGLLVAIPELGGLWEIVEIYSYRLTRKQLKTRKTLTVIF*
JGI12627J18819_104701581	3300001867	Forest Soil	YLSTMKTECLLRRNKYHTTAWVEAEATKLGLRIAIPELGGLWEIVEIYPYRLTDEQLRARNTLILS*
Ga0066388_1008454692	3300005332	Tropical Forest Soil	MKTQCLLRRNRFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIFPNRLTDKQLRTRKTLILS*
Ga0066388_1012749351	3300005332	Tropical Forest Soil	MKTQCLLKRNKYHTTAWVDAETTNLGLLVQIPELGGLWEIVEIYPYRLTDKQLRTHKTLI
Ga0066388_1022995432	3300005332	Tropical Forest Soil	MRNVKTQCLLRRNRFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYQLTDKQLRTHKSLILA*
Ga0066388_1024277542	3300005332	Tropical Forest Soil	LRRNQFHTTAWMDARTIKLGVLVEIAELGGLWEIVEIYPYRLTDKQLRTRKTLMLS*
Ga0066388_1030918842	3300005332	Tropical Forest Soil	MRNVKTQCLLRRNQFHTTAWMDARTIKLGVVVDIAELGGLWEIVEIYPYRLTDKQLRTRKTLILS*
Ga0066388_1062634511	3300005332	Tropical Forest Soil	LRRNQFHTTAWMDARTIKLGVLVEIAELGGLWEIVEIYPYRLTDQQLRTRKTLMLS*
Ga0066903_1033273752	3300005764	Tropical Forest Soil	MRNVKTQCLLRRNRFHTTAWMDARTIKLGVVVDIAELGGLWEIVEIYPYRLTDK
Ga0066903_1070975401	3300005764	Tropical Forest Soil	MRNVKTQCLLRRNQFHTTAWMDVGTIKLGVVVDIAELGGLWEIVEIYPYRLTDKQLRTRKTLILS*
Ga0066903_1075099331	3300005764	Tropical Forest Soil	MRNVKTQCLLRRNQLHTTAWMDARTIKLGVVVEVAELGGLWEIVEIYPYRLTDKQLRTRKTLML
Ga0075023_1003253311	3300006041	Watersheds	MKTQCLLKQNQYHTTAWTNAEATKLGLLVEIPELGGRWEIVEIYPYRLSDKQLKTHKTLIVLS*
Ga0075026_1005485042	3300006057	Watersheds	MKTQCLLRGNKYHTTAWVEAETTKLGLRVEIDELGGVWEIVEIYPYRLTDKQLKHTTL*
Ga0075026_1009450561	3300006057	Watersheds	MRTQCLLKQNRYHTTAWISAQATKLGLLVEIPELGGRWEIVEIYPYRLSD
Ga0126373_125522331	3300010048	Tropical Forest Soil	YHTTAWVEVEATKLGLCVELPELGGLWEIVEIYSYRLTDEQLKTHKTTLIVH*
Ga0123356_100455543	3300010049	Termite Gut	VDHMKTHCLLRQNRYHTTAWIDPKATKLGLLVEIPELGGRWEIVEIYPYLLTDKQLKTRRTLILKDYEGRMLS*
Ga0126376_101673252	3300010359	Tropical Forest Soil	LLRRNRFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIFPYRLTDKQLRTRKTLMLS*
Ga0126372_100869871	3300010360	Tropical Forest Soil	TTDLPPGPNNTVARHMKTQCLLRRNQYHTTAWMDAEATKLGLVVEIPQLGGLWEIVEIFPYRLTDRQLKRHHTLILS*
Ga0126379_129192232	3300010366	Tropical Forest Soil	GFHSIRGGRGQMKTQCLLRRNQFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIFPYRLTDKQLRTRKTPDTFLS*
Ga0126381_1001420332	3300010376	Tropical Forest Soil	MKTECLLRRNKYHTTAWVEAEATELGSRVETPELGGLWEIVEIYPYRLTDEQLKTHNTLIAH*
Ga0126381_1039678801	3300010376	Tropical Forest Soil	MKTQCLLRRNQYHTTAWMDAEATKLGLVVEIPQLGGLWEIVEIYPYRLTDKQLRTRKTLMLS*
Ga0182036_108093661	3300016270	Soil	MKTQCLLRRNQFHTTAWMDVRTIKLGVVVEIAELGGLWEIVEIFPYRLTDKQLRTRKTLILS
Ga0182036_118164951	3300016270	Soil	MRNMKTQCLLRRNQFHTTAWMDARTIKRGVLVEIAELGGLWEIVEIYPYRLTDKQLRTRKTL
Ga0182036_118433441	3300016270	Soil	MRNVKTQCLLRRNQFHTTAWMDARTIKLGVVVDIAELGGLWEIVEIYPYRLTDKQLRTRKTL
Ga0182041_113382823	3300016294	Soil	MKTECLLRQNKYHTTAWVEAEATKLGLRVEIAELGGLWEIVEIYPYRLTDEQLKAHKTLI
Ga0182033_110488241	3300016319	Soil	MRNVKTQCLLRRNRFHTTAWMDARTVKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRTRKTLVLA
Ga0182033_121030382	3300016319	Soil	YPATVKTECLLRRNKYHATAWVEVEANKLGLRVEIPQLSGLWEIVEIYPYRLTDEQLKTHETTLIAHVPTLA
Ga0182035_101839051	3300016341	Soil	IDLERAPAYLFVRISQHRALWRDQMKTQCMLKRNKCHTTAWVDAEATKLGLLVQIPELGGLWEIVEIYPYRLTDKQLRTHKTLIVLS
Ga0182035_110813661	3300016341	Soil	MKTQCLLKRNKYHTTAWMDAEATKLGLLVQIPELGGLWEIVEIYPYRLTDKQLRTHK
Ga0182034_106902032	3300016371	Soil	MRNVKTQCLLRRNRFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRTRKTLVLA
Ga0182034_108134422	3300016371	Soil	MKTQCLLRRNQFHTTAWMDVRTIKLGVVVEIAELGGLWEIVEIFPYRLTDK
Ga0182040_104939831	3300016387	Soil	MRNVKTQCLLRRNRFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRTR
Ga0182040_105839102	3300016387	Soil	MRNVKTQCLLRRNQFHTTAWMDARTIKLGVVVDIAELGGLWEIVEIYPYRLTDKQLRTRKTLILS
Ga0182040_106540391	3300016387	Soil	ISQHRALWRDQMKTQCLLKRNKCHTTAWVDAEATKLGLLVQIPELGGLWEVVEIYPYRLTDKQLRTHKTLIVLS
Ga0182037_101294493	3300016404	Soil	MKTQCLLRRNQFHTTAWMDVRTIKLGVVVEIAELGGLWEIVEIFPYRLTDKQLRTRK
Ga0182037_105124831	3300016404	Soil	KNHTTAWVEADATKLGLCVEIPELNGPWEIVEIYPYRLTDEQLKTHKTLIAH
Ga0182037_114813151	3300016404	Soil	MRNVKTQCLLRRNRFHTTAWMDARTVKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRTRKTL
Ga0182039_117045792	3300016422	Soil	MRNMKTQCLLRRNQFHTTGWMNARTIKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRTRK
Ga0182039_117124501	3300016422	Soil	YHTTAWVGAEATKLGLRVEITELGGLWEIVEIYPYRLTNEQLKTHQCLIAH
Ga0182039_119002641	3300016422	Soil	MKTQCLLRRNQFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIFPYRLTDKQLRTRKTLVLS
Ga0182039_119259561	3300016422	Soil	TRWVDQMKTQCLLRRNQYHTTAWMDAEATKLGLVVEISQLGGLWEIVEIYPYRLTDKQLRTRKTLMLC
Ga0182038_118093422	3300016445	Soil	RRNRFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRLTNKQLRMRKTLIVG
Ga0182038_120817762	3300016445	Soil	MRNVKTQCLLRRNRFHTTAWMDARTVKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRTRK
Ga0187817_105847032	3300017955	Freshwater Sediment	MKTQCLLRRNEYHTTAWIDSDVTKLGLLVEIPELGGLWEIIEIYPHPSTDKQLT
Ga0210399_101081231	3300020581	Soil	LIRWQGCHQIKTQCLLKQNQYHTTAWINAEATKLGLLVKIPELGGRWEIVEIYPYRLSDKQLKTHNTLIGLS
Ga0126371_113242032	3300021560	Tropical Forest Soil	MRNLKTQCLLRRNRFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRLT
Ga0126371_128432842	3300021560	Tropical Forest Soil	MRDVKTQCLLRRNRFHTTAWVDARTIKLGVVVEIAELGGLWEIVEIYPYRLTDKQL
Ga0207759_1046172	3300026823	Tropical Forest Soil	MRNVRTQCLLRRNQFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRVTDKQLRTRKTLVLS
Ga0207859_10218871	3300026859	Tropical Forest Soil	KTQCLLRRNAYHTTAWIDTDATKLGLLVAIPELGGLWEIVEIYSYRLTRKQLKTRKTLTVIF
Ga0207787_10146721	3300026908	Tropical Forest Soil	MKTQCLLRRNQFHTTAWMDVRTIKLGVVVEIAELGGLWEIVEIFPYRLTDKQLRT
Ga0207743_10238432	3300026945	Tropical Forest Soil	MSAPTLLGRNKYHTTAWVGAEATKLGLRVEITELGGLWEIVEIYPYRLTDEQLKTHKTLIAH
Ga0207822_10240401	3300026981	Tropical Forest Soil	GAGQMKTQCLLRRNQFHTTAWMDVRTIKLGVVVEIAELGGLWEIVEIFPYRLTDKQLRTRKTLILS
Ga0207824_10079751	3300026990	Tropical Forest Soil	MRNVRTQCLLRRNQFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRVTDKQLRTRKTLILS
Ga0207784_10052002	3300026997	Tropical Forest Soil	MKTQCLLRRNQFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRVTDKQLRTRKTLVLS
Ga0207855_10043172	3300027039	Tropical Forest Soil	MKTQCLLRRNQFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRTRKTLILS
Ga0207766_10184272	3300027042	Tropical Forest Soil	MSAPTLLGRNKYHTTAWVGAEATKLGLRVEITELGGLWEIVEIYPYRLTDKQLRTR
Ga0207826_10796244	3300027680	Tropical Forest Soil	MKTECLLRRNKYHTTAWVEAEATKLGLRVEIPELGGLWEIVEIYPYRLTDEQLK
Ga0318573_104612122	3300031564	Soil	MKTQCLLRRNKYHTTAWMDVEATKLGLVVEIPQLGGLWEIVEIFPYRLTNK
Ga0310915_106156302	3300031573	Soil	MRDVKTQCLLRRNRFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRLTNKQLRMRKTLIVG
Ga0318572_104117941	3300031681	Soil	MRNVKTQCLLRRNRFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRTRKTLILA
Ga0318560_103490552	3300031682	Soil	MKAQCLLRRNQYHTTAWMDVEATKLGLIVEIPQLGGLWEIVEIYPYRLTDKQLRTRKTLMLS
Ga0306917_109689441	3300031719	Soil	LRRNQYHTTAWMDAEATKLGLVVEIPQLGGLWEIVEIYPYRLTDKQLRTRKTLMLC
Ga0318493_108015691	3300031723	Soil	MRDVKTQCLLRRNRFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRTRKTLIVA
Ga0318500_107014151	3300031724	Soil	RGQMKTQCLLRRNQFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIFPYRLTDKQLRTRKTLILS
Ga0306918_105854662	3300031744	Soil	VDQMKTQCLLRRNQYHTTAWMDAEATKLGLVVEIPQLGGLWEIVEIYPYRLTDKQLRTRKTLMLS
Ga0306918_107071453	3300031744	Soil	QLRRNQYHTTAWMDAEATKLGLVVEIPQLGGLWEIVEIFPYRLTDRQLKRHHTLILS
Ga0306918_108263151	3300031744	Soil	MRNMKTQCLLRRNQFHTTGWMNARTIKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRT
Ga0307477_100157313	3300031753	Hardwood Forest Soil	MKTQCLLKQNRYHTTAWISAQATQLGLLVEIPDLGGRWEIVEIYPYRLSDKQLKTHKTLIVL
Ga0318521_108154881	3300031770	Soil	ISWRMWRPETMKTECLLRRNKYHTTAWVGAEATKLGLRVEIPELGGLWEIVEIYPYRLTNEQLKTHQCLIAH
Ga0318546_102561162	3300031771	Soil	MKTQCLLRRNQYHTTAWMDAEATKLGLVVEISQLGGLWEIVEIYPYRLTDKQLRTRKTLMLS
Ga0318546_105452271	3300031771	Soil	MRNVKTQCLLRRNRFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIFPYRLTDKQLRT
Ga0318547_107719491	3300031781	Soil	LRRNQYHTTAWMDAEATKLGLRVEIPQLGGLWEIVEIFPYRLTDRQLKRHRALILS
Ga0318565_104786742	3300031799	Soil	LRRNQFHTTAWMDAHTIKLGVVVDIAELGGLWEIVEIYPYRLTDKQLRTRKTLMLC
Ga0318497_100666841	3300031805	Soil	LLRRNQYHTTAWMDAEATKLGLVVEIPQLGGLWEIVEIYPYRLTDKQLRTRKTLMLS
Ga0310917_100238655	3300031833	Soil	MRNVKTQCLLRRNRFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRTRKTLILS
Ga0310917_102709542	3300031833	Soil	MRNVKTQCLLRRNRFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRTRNTLILS
Ga0310917_105927551	3300031833	Soil	MKTQCLLRRNKYHTTAWMDVEATKLGLVVEIPQLGGLWEIVEIFPYRLTNKQLKRHHALILS
Ga0310917_106988512	3300031833	Soil	MRNVKTQCLLRRNQFHTTAWMDARTIKRGVLVEIAELGGLWEIVEIYPYRLTDKQLRT
Ga0310917_109193512	3300031833	Soil	NHTTAWVEADATKLGLCVEIPELNGPWEIVEIYPYRLTDEQLKTHKTLIAH
Ga0318511_102566551	3300031845	Soil	RRINRPNKQYGSRHMKTQCLLRRNQYHTTAWMDAEATKLGLVVEIPQLGGLWEIVEIYPYRLTDKQLRTRKTLMLS
Ga0318512_105283902	3300031846	Soil	RAQRRINRPNKQYGSRHMKTQCLLRRNQYHTTAWMDAEATKLGLVVEIPQLGGLWEIVEIYPYRLTDKQLRTRKTLMLS
Ga0318527_105063401	3300031859	Soil	MKTQCLLRRNQYHTTAWMDAEATKLGLVVEIPQLGGLWEIVEIYPYRLTDKQLRTRKTLMLS
Ga0306925_103132945	3300031890	Soil	MKTECLLRQNKNHTTAWVEADATKLGLCVEIPELNGPWEIVEIYPYRLTDEQLKTHKTLIAH
Ga0306925_109656862	3300031890	Soil	MRNVKTQCLLRRNQFHTTAWMDARTIKLGVVVDIAELGGLWEIVEIYPYRLTDKQLRTRKTLILA
Ga0318520_110819032	3300031897	Soil	MSAPTLLGRNKYHTTAWVGAEATKLGLRVEITELGGLWEIVEIYPYQLTDEQLKTHQCLIAH
Ga0306923_102820523	3300031910	Soil	MKTQCLLKRNKYHTTAWVDAEATKLGLLVQIPELGGLWEVVEIYPYRLTDKQLRTHK
Ga0306921_102680794	3300031912	Soil	MRNVKTQCLLRRNRFHTTAWMDARTVKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRTRKTLV
Ga0306921_117800481	3300031912	Soil	MRDVKTQCLLRRNRFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRTRKTLI
Ga0306921_125715821	3300031912	Soil	VCSDSARRNKYHTTAWVGAEATKLGLRVEITELGGLWEIVEIYPYQLTDEQLKTHQCLIA
Ga0310912_109258821	3300031941	Soil	MKTQCLLKRNKYHTTAWVDAEATKLGLLVQIPELGGLWEVVEIYPYRLTDKQLRTHKTLIVLS
Ga0310912_111681692	3300031941	Soil	DQMKTQCLLRRNQYHTTAWMDAEATKLGLVVEIPQLGGLWEIVEIYPYRLTDKQLRTRKTLMLS
Ga0310916_104502951	3300031942	Soil	RRNKYHTTAWMDVEATKLGLVVEIPQLGGLWEIVEIFPYRLTNKQLKRHHTLILS
Ga0310910_110641121	3300031946	Soil	MKTQCLLRRNQFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIFPYRLTDKQLRTRKTLI
Ga0310910_115829651	3300031946	Soil	TTAWVEVEANKLGLRVEIPQLSGLWEIVEIYPYRLTDEQLKTHQCLIAH
Ga0310909_106522551	3300031947	Soil	MKTQCLLRRNQFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIFPYRLTGKQLRTRKTL
Ga0306926_106842852	3300031954	Soil	TWVGAEATKLGLRVEITELGGLWEIVEIYPYRLTDEQLKTHQCLIAH
Ga0306926_128165771	3300031954	Soil	MRNVKTQCLLRRNQFHTAAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRTRKTLILA
Ga0307479_100270596	3300031962	Hardwood Forest Soil	MKTQCLLKQNRYHTTAWISAQATKLGLLVEIPELGGRWEIVEIYPYRLSDKQLKTHKTLIVL
Ga0306922_110655853	3300032001	Soil	HMKTQCLLRRNQYHTTAWMDAEATKLGLRVEIPQLGGLWEIVEIFPYRLTDRQLKRHRALILS
Ga0306922_112910322	3300032001	Soil	MRHVKTQCLLRRNQFHTTAWMDARTIKLGVVVDIAELGGLWEIVEIYPYRLTDKQLRTRKTLILA
Ga0310911_103503703	3300032035	Soil	YGSGHMKTQCLLRRNQYHTTAWMDAEATKLGLRVEIPQLGGLWEIVEIFPYRLTDRQLKRHRALILS
Ga0310911_104012681	3300032035	Soil	AGTCGSRTALSMRNVKTQCLLRRNRFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRTRNTLILS
Ga0318549_100672381	3300032041	Soil	CLLRRNQYHTTAWMDAEATKLGLVVEIPQLGSLWEIVEIYPYRLTDKQLRTRKTLMLS
Ga0318575_101709321	3300032055	Soil	VDQMKTQCLLRRNQYHTTAWMDAEATKLGLVVEIPQLGSLWEIVEIYPYRLTDKQLRTRKTLMLS
Ga0318533_106451921	3300032059	Soil	MKTQCLLKRNKYHTTAWVDAEATKLGLLVQIPELGGLWEVVEIYPYRLSDKQLRTHKTLIVLS
Ga0306920_1001758723	3300032261	Soil	MKTQCLFRRNQYHTTAWMDAEAIKLGLRVEIPQLGGLWEIVEIFPYRLTDRQLKRHQTLILS
Ga0306920_1004000022	3300032261	Soil	MRNMKTQCLLRRNQFHTTGWMNARTIKLGVVVEIAELGGLWEIVEIYPYRLTDKQLRTRKTLILS
Ga0306920_1010793152	3300032261	Soil	MRNVKTQCLLRRNRFHTTAWMDARTIKLGVVVEIAELGGLWEIVEIYPYRLTNKQLRMRKTLIVG
Ga0306920_1016752642	3300032261	Soil	AQRRINRPDKQYGSRHMKTQCLLRRNQYYTTAWMDAEATKLGLIVGVPQLGGLWKIVEIFPYRLTNRQLKSHHTLILS
Ga0306920_1022514472	3300032261	Soil	ALSMRNMKTQCLLRRNQFHTTGWMNARTIKLGVVVEIAELGGLLEIVEIYPYRLTDKQLRTRKTLILS
Ga0310914_115410002	3300033289	Soil	NKYHTTAWVEVEATKLGLRVEIPQLSGLWEIVEIYPYRLTDEQLKTHETTLIAHVPTLA
Ga0318519_104945601	3300033290	Soil	NKYHTTAWVGAEATKLGLRVEIPELGGLWEIVEIYPYRLTNEQLKTHQCLIAH
Ga0318519_108472101	3300033290	Soil	RWVDQMKTQCLLRRNQYHTTAWMDAEATKLGLVVEIPQLGGLWEIVEIYPYRLTDKQLRTRKTLMLS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081851

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences