Metagenome Family F081844

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081844
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	134 residues
Representative Sequence	VRTRGLVLALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPREP
Number of Associated Samples	100
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.14 %
% of genes near scaffold ends (potentially truncated)	38.60 %
% of genes from short scaffolds (< 2000 bps)	71.05 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.228 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.403 % of family members)
Environment Ontology (ENVO)	Unclassified (47.368 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.035 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 12.88% β-sheet: 11.04% Coil/Unstructured: 76.07%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF07478	Dala_Dala_lig_C	46.49
PF02195	ParBc	16.67
PF00155	Aminotran_1_2	5.26
PF01381	HTH_3	3.51
PF13614	AAA_31	2.63
PF01520	Amidase_3	1.75
PF02527	GidB	1.75
PF01424	R3H	0.88
PF08535	KorB	0.88
PF00116	COX2	0.88
PF00296	Bac_luciferase	0.88
PF13083	KH_4	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0357	16S rRNA G527 N7-methylase RsmG (former glucose-inhibited division protein B)	Translation, ribosomal structure and biogenesis [J]	1.75
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	1.75
COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	Cell cycle control, cell division, chromosome partitioning [D]	0.88
COG1622	Heme/copper-type cytochrome/quinol oxidase, subunit 2	Energy production and conversion [C]	0.88
COG1847	Predicted RNA-binding protein Jag (SpoIIIJ-associated), conains KH and R3H domains	General function prediction only [R]	0.88
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.88
COG4263	Nitrous oxide reductase	Inorganic ion transport and metabolism [P]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.23 %
Unclassified	root	N/A	8.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.23 %
Unclassified	root	N/A	8.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.23 %
Unclassified	root	N/A	8.77 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	57.02 %
Unclassified	root	N/A	8.77 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	57.02 %
Unclassified	root	N/A	8.77 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	36.84 %
Unclassified	root	N/A	8.77 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	15.79 %
Unclassified	root	N/A	8.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	7.89 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.79 %
Unclassified	root	N/A	8.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	7.89 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.79 %
Unclassified	root	N/A	8.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	7.89 %
Mycobacteroides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.79 %
Unclassified	root	N/A	8.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	7.89 %
Mycobacteroides abscessus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.79 %
Unclassified	root	N/A	8.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	7.89 %
Mycobacteroides abscessus subsp. abscessus	subspecies	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_10567115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300000956\|JGI10216J12902_107977250	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300001305\|C688J14111_10001770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5751	Open in IMG/M
3300001305\|C688J14111_10090201	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300001686\|C688J18823_10276196	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300001686\|C688J18823_10459308	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300001991\|JGI24743J22301_10021173	Not Available	1241	Open in IMG/M
3300003324\|soilH2_10068828	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300004081\|Ga0063454_100474172	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300004114\|Ga0062593_102697830	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300004479\|Ga0062595_101018712	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300004480\|Ga0062592_100784041	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300005164\|Ga0066815_10006474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1321	Open in IMG/M
3300005327\|Ga0070658_10396471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1185	Open in IMG/M
3300005328\|Ga0070676_10315209	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300005330\|Ga0070690_100014635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4657	Open in IMG/M
3300005332\|Ga0066388_102182559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	999	Open in IMG/M
3300005333\|Ga0070677_10697616	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005334\|Ga0068869_100064600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2692	Open in IMG/M
3300005334\|Ga0068869_100680688	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300005338\|Ga0068868_100860643	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300005339\|Ga0070660_100575837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	940	Open in IMG/M
3300005340\|Ga0070689_100308499	Not Available	1319	Open in IMG/M
3300005341\|Ga0070691_10334473	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300005345\|Ga0070692_10018454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3356	Open in IMG/M
3300005364\|Ga0070673_100065068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2907	Open in IMG/M
3300005366\|Ga0070659_100198698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1650	Open in IMG/M
3300005366\|Ga0070659_101403657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300005437\|Ga0070710_10219937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1208	Open in IMG/M
3300005444\|Ga0070694_100279367	Not Available	1272	Open in IMG/M
3300005455\|Ga0070663_100239118	Not Available	1433	Open in IMG/M
3300005456\|Ga0070678_100052584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2958	Open in IMG/M
3300005457\|Ga0070662_100238042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1459	Open in IMG/M
3300005459\|Ga0068867_100053244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2989	Open in IMG/M
3300005544\|Ga0070686_100018405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4099	Open in IMG/M
3300005547\|Ga0070693_100224461	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300005578\|Ga0068854_100270330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1364	Open in IMG/M
3300005578\|Ga0068854_100302400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1294	Open in IMG/M
3300005614\|Ga0068856_101070081	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300005614\|Ga0068856_101113268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	807	Open in IMG/M
3300005615\|Ga0070702_100159241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1458	Open in IMG/M
3300005618\|Ga0068864_100036569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4185	Open in IMG/M
3300005719\|Ga0068861_101796283	Not Available	608	Open in IMG/M
3300005764\|Ga0066903_100401906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2254	Open in IMG/M
3300005834\|Ga0068851_10043707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2259	Open in IMG/M
3300005843\|Ga0068860_102274907	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300006163\|Ga0070715_10019053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2626	Open in IMG/M
3300006175\|Ga0070712_100010633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5813	Open in IMG/M
3300006794\|Ga0066658_10004419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4996	Open in IMG/M
3300009094\|Ga0111539_11498037	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300009098\|Ga0105245_10010764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7960	Open in IMG/M
3300009098\|Ga0105245_11174500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	815	Open in IMG/M
3300009176\|Ga0105242_10032264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4188	Open in IMG/M
3300009553\|Ga0105249_12216461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300010371\|Ga0134125_10386657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1552	Open in IMG/M
3300010373\|Ga0134128_11292835	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300010375\|Ga0105239_10936671	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300010397\|Ga0134124_11918159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300010398\|Ga0126383_11767991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300010399\|Ga0134127_11286634	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300010400\|Ga0134122_10486292	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300011119\|Ga0105246_10538885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	998	Open in IMG/M
3300012212\|Ga0150985_109387887	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300012469\|Ga0150984_101045107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	3216	Open in IMG/M
3300012898\|Ga0157293_10028491	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300012911\|Ga0157301_10042692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1132	Open in IMG/M
3300012915\|Ga0157302_10029894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1431	Open in IMG/M
3300012916\|Ga0157310_10176122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300012951\|Ga0164300_10395529	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300012958\|Ga0164299_10596361	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300012960\|Ga0164301_10164198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1375	Open in IMG/M
3300012984\|Ga0164309_10056221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2305	Open in IMG/M
3300012984\|Ga0164309_10471292	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300012984\|Ga0164309_10484052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	943	Open in IMG/M
3300013306\|Ga0163162_10713062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1124	Open in IMG/M
3300014745\|Ga0157377_10022775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3313	Open in IMG/M
3300014745\|Ga0157377_10819955	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300014969\|Ga0157376_10258297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1631	Open in IMG/M
3300015200\|Ga0173480_10549898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300015371\|Ga0132258_10267610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4188	Open in IMG/M
3300015372\|Ga0132256_101284918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	845	Open in IMG/M
3300015372\|Ga0132256_102038186	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300015373\|Ga0132257_100999483	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300025900\|Ga0207710_10306818	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300025901\|Ga0207688_10016628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3993	Open in IMG/M
3300025901\|Ga0207688_10313579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	961	Open in IMG/M
3300025905\|Ga0207685_10162340	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300025907\|Ga0207645_10063078	All Organisms → cellular organisms → Bacteria	2368	Open in IMG/M
3300025926\|Ga0207659_11431448	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300025927\|Ga0207687_10004187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9662	Open in IMG/M
3300025927\|Ga0207687_10019074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4539	Open in IMG/M
3300025927\|Ga0207687_10346187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1210	Open in IMG/M
3300025932\|Ga0207690_10299181	Not Available	1258	Open in IMG/M
3300025933\|Ga0207706_10304505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1388	Open in IMG/M
3300025940\|Ga0207691_10103339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2541	Open in IMG/M
3300025941\|Ga0207711_10197070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1837	Open in IMG/M
3300025942\|Ga0207689_10387253	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300025972\|Ga0207668_10299981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1326	Open in IMG/M
3300026023\|Ga0207677_10167025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1716	Open in IMG/M
3300026067\|Ga0207678_10138205	All Organisms → cellular organisms → Bacteria	2079	Open in IMG/M
3300026075\|Ga0207708_10066185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2762	Open in IMG/M
3300026078\|Ga0207702_11666449	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300026089\|Ga0207648_10005510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12761	Open in IMG/M
3300026118\|Ga0207675_101694947	Not Available	652	Open in IMG/M
3300026142\|Ga0207698_10373341	Not Available	1354	Open in IMG/M
3300026325\|Ga0209152_10019776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2301	Open in IMG/M
3300028768\|Ga0307280_10116807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	899	Open in IMG/M
3300028778\|Ga0307288_10274070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300030336\|Ga0247826_10059532	All Organisms → cellular organisms → Bacteria	2183	Open in IMG/M
3300031740\|Ga0307468_100012914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3369	Open in IMG/M
3300031938\|Ga0308175_100089328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2805	Open in IMG/M
3300031996\|Ga0308176_11823168	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300034817\|Ga0373948_0145548	Not Available	589	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	53.51%
Environmental	Environmental	46.49%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	53.51%
Terrestrial	Environmental → Terrestrial	46.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.07%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	19.30%
Loam	Environmental → Terrestrial → Soil → Loam	18.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	17.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.63%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	19.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	17.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.40%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.51%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.14%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.51%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.88%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.88%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.88%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_105671151	3300000891	Soil	LSVRGRGLALALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDHQAVAVLANDPKHCGVWALGLASGLSEEASTQIRQEVADGVK
JGI10216J12902_1079772501	3300000956	Soil	GPHGRRSGRPVARTDVRPYHTNHGLALSIRSACAAVALVCGMSCTAGANGATTPTLGDMTPSDALPKTVHVAHITYDVLCTPVAEALIDIELPHAGEPKIRAITGLWDDQAVAVLADDPKGCGTWALGLARGLSPEATAEIRAEVADGVKNFGVTESPVPREP*
C688J14111_100017703	3300001305	Soil	LTARALLLVGTLLSLFACTGGTTATTPAPSIDTTAGNLPRTVEVGAVTYDVSCTPVAEALIDVALPHAGEPKIRAITGLWDRQAVAVAVNDPKTCGLWSLGLARGLTDQAATEIRQEVADGVTNFGVTASPVPREP*
C688J14111_100902012	3300001305	Soil	LRARRVVLVLGCFAVACTGGRTTTPTPTPDAAPGRELPTSVHVGRITFDVSCTPVAEALVDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKTCGVWVLGLAQGLSGEAADQIHQEVADGVKSFGVTASPVPREP*
C688J18823_102761961	3300001686	Soil	HRLTLRARRVVLVLGCFAVACTGGRTTTPTPTPDAAPGRELPTSVHVGRITFDVSCTPVAEALVDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKTCGVWVLGLAQGLSGEAADQIHQEVADGVKSFGVTASPVPREP*
C688J18823_104593082	3300001686	Soil	LTARALLLVGTLLSLFACTGGTTATAPAPSIDKTAGNLPPTVKVGAVTYDVSCTPVAEALIDVELPHAGEPKIRAITGLWDRQAVAVAANDPKRCGLWSLGLARGLTDQAATEIRQEVADGVANFGVTASPVPREP*
JGI24743J22301_100211732	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	RGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP*
soilH2_100688282	3300003324	Sugarcane Root And Bulk Soil	LRVPPRGALLAIGLLAVACTGGEPTTSTPDATAARALPATVQVGRTRFDVTCTPVAEALVDIELPHAGQPKIRAVTGLWDRQAVGVLANDPKGCGVWTLGLAQGLSQEAADQIRQEVADGINTFGVTASPVPREP*
Ga0063454_1004741722	3300004081	Soil	AVACTGGRTTTPTPTPDAAPGRELPTSVHVGRITFDVSCTPVAEALVDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKTCGVWVLGLAQGLSGEAADQIHQEVADGVKSFGVTASPVPREP*
Ga0062593_1026978301	3300004114	Soil	ASCTQGGATTSPTRSPDQAPGRALPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDHQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKNFGVTASPVPREP*
Ga0063455_1001536981	3300004153	Soil	LTLRARRVVLVLGCFAVACTGGRTTTPTPTPDAAPGRELPTSVHVGRITFDVSCTPVAEALVDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKTCGVWVLGLAQGLSGEAAD
Ga0062595_1010187122	3300004479	Soil	LSVRGRGLVLALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDHQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPREP*
Ga0062592_1007840412	3300004480	Soil	MASLCLALCLAVACTGGTGGASPTAPVGATPGTDGLPATVKVGRITYDVSCTPVAETLIDIELPHAGEPKIRAITGLWDHQAVAVIANNPKGCGVWALGLARGLSPEAATEIRQEVSDGVKDFGVTASPVPREP*
Ga0066815_100064742	3300005164	Soil	LSARTAAAAIVLACLMAACTSGSGSTTPSATPDPTPGDGLPATVHVGTITYDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKGCGVWALGLARGLSQEATTEIHQEVADGVKNFGVTASPVPREP*
Ga0070658_103964711	3300005327	Corn Rhizosphere	LSVRTRGLVLALACLAVACTRGDGAATSPTPDQTPGRALPATVTVGRTTFNVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP*
Ga0070676_103152091	3300005328	Miscanthus Rhizosphere	RPHHTGVELALSVRTRGLVLALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP*
Ga0070690_1000146354	3300005330	Switchgrass Rhizosphere	VRTRGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRITFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP*
Ga0066388_1021825592	3300005332	Tropical Forest Soil	LRPAVGTLIGALVFLIACTGGDAATTPTNTVDATPGHSLPATVKVGHTTYDVSCTPVAETLIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPRGCGVWALGLARGLSYGATTQIRQEVADGVQNFGVTASPVPREP*
Ga0070677_106976162	3300005333	Miscanthus Rhizosphere	LSVRTRGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVE
Ga0068869_1000646003	3300005334	Miscanthus Rhizosphere	LSVRTRGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFNVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP*
Ga0068869_1006806882	3300005334	Miscanthus Rhizosphere	LALSVRGRGLVLALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTRIRREVADGVKDFGVTASPVPREP*
Ga0068868_1008606432	3300005338	Miscanthus Rhizosphere	ATTSPTRSPDQAPGRALPATVTVGHTTFDVSCTPVAEALIDIELPYAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTRIRQEVADGVKEFGVTASPVPREP*
Ga0070660_1005758372	3300005339	Corn Rhizosphere	LSVRTRGLVLALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTQI
Ga0070689_1003084992	3300005340	Switchgrass Rhizosphere	RGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPREP*
Ga0070691_103344731	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	CLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP*
Ga0070692_100184542	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	LSVRTRGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP*
Ga0070673_1000650682	3300005364	Switchgrass Rhizosphere	LSVRTRGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFNVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTAPPVPREP*
Ga0070659_1001986982	3300005366	Corn Rhizosphere	LSVRTRGLVLALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP*
Ga0070659_1014036572	3300005366	Corn Rhizosphere	LNVRGRCLVLALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEA
Ga0070710_102199372	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAACTSGSGSTTPSATPDPTPGDGLPATVHVGTITYDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKGCGVWALGLARGLSQEATTEIHQEVADGVKNFGVTASPVPREP*
Ga0070694_1002793672	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VRPHHTGVELALSVRGRGLVLALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPREP*
Ga0070663_1002391182	3300005455	Corn Rhizosphere	VRPHHTGVELALSVRTRGLVLALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP*
Ga0070678_1000525842	3300005456	Miscanthus Rhizosphere	LSVRTRGLVLALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFNVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP*
Ga0070662_1002380422	3300005457	Corn Rhizosphere	LNVRGRGLVLALGCLAASCTQGGATTSPTRSPDQAPGRTLPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPREP*
Ga0068867_1000532443	3300005459	Miscanthus Rhizosphere	LSVRTRGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFNVSCTPVAEALIDIELPHAGEPKIRPVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP*
Ga0070686_1000184052	3300005544	Switchgrass Rhizosphere	LSVRTRGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRITFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP*
Ga0070693_1002244612	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LSVRGRGLVLALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTRIRQEVADGVKDFGVTASPVPREP*
Ga0068854_1002703302	3300005578	Corn Rhizosphere	LNVRGRGLVLALGCLAASCTQGGATTSPTRSSDQAPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPREP*
Ga0068854_1003024002	3300005578	Corn Rhizosphere	VRTRGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP*
Ga0068856_1010700812	3300005614	Corn Rhizosphere	ACIAVACTGGSNPASPTAPPGAAPGGGLPATVRLGPITYDVSCTPVAEALIDVELPHAGEPKIRAITGLWDHQAVAVLANNPKQCGVWALGLARGLSEDATRQIRQEVADGVNNFGVTASPVPREP*
Ga0068856_1011132681	3300005614	Corn Rhizosphere	LSVRTRGLVLALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVE
Ga0070702_1001592412	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	LNVRGRCLVLALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTRIRQEVADGVKDFGVTASPVPREP*
Ga0068864_1000365696	3300005618	Switchgrass Rhizosphere	VACTRGGGAATSPTPDQTPGRALPATVTVGRTTFNVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP*
Ga0068861_1017962831	3300005719	Switchgrass Rhizosphere	GTDGGRGGRSVTRPDVRPHHTDAGLPLSSSARRRLAPLLIILAGTVGCTGNGGPATTTLAPAGSSAHNLPATVHVGHITFDVSCTPVAEDLIDIELPHAGQPKIRAVTGLWDHQAVAVIANDPKGCGVWALGLARGLSQEATSQIQQEVADGVKNFGVTASPVPRQP*
Ga0066903_1004019063	3300005764	Tropical Forest Soil	LSARGAAAAVVLICLAVGCTGGSVGTSPSVSPDAAPGGGLPATVTVGNITYDVSCTPVAETLIDIELPHEGEPKIRAVAGLWDHQAVAVLANNPKGCGVWALGLARGLSSEATTAIRQEVADGVKHFGVTASPVPREP*
Ga0068851_100437072	3300005834	Corn Rhizosphere	VRTRGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFNVSCTPVAEPLIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP*
Ga0068860_1022749071	3300005843	Switchgrass Rhizosphere	RGRGLVLALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTRIRQEVADGVKGFGVTASPVPREP*
Ga0070715_100190533	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MVAVTAVFLCLAAACTGGGGGTSPTASPDPTPGDGLPATVSVGHITYDVSCTPVAEALIDIELPRAGGPKIRAVAGLWDHQAVAVLANNPKGCGVWALGLAQGLSPEATAEIRSEVADGVKNFGVTASPVPRQP*
Ga0070712_1000106332	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LSARTAAAAIVLACLMAACTSGSGSTTPSATPDPTPGDGSPATVHVGTITYDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKGCGVWALGLARGLSQEATTEIHQEVADGVKNFGVTASPVPREP*
Ga0066658_100044196	3300006794	Soil	VTSPTSPPHSTPGGGLPSTVTVGRVTYDVSCTPVAETLIDIELPHAGEPKIRAVTGLWDRQAVAVLANDPKGCGMWALGLARGLSTEAMTQIRQEVADGVKNFGVTASPVPREP*
Ga0111539_114980372	3300009094	Populus Rhizosphere	GGATTSPTRSPDQAPGRALPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTRIRQEVAEGVKDFGVTASPVPREP*
Ga0105245_100107645	3300009098	Miscanthus Rhizosphere	LSVRSHGLVLVLGCLVASCTRGGATTSPTGTPDPAPGHALPATVSVGHITYDVSCTPVAEALIDIELPHAGEPQIRAVTGLWDHQAVAVLANDPKRCGVWALGLARGLSEEATTQIRQEVADGVKNFGVTASPVPREP*
Ga0105245_111745002	3300009098	Miscanthus Rhizosphere	LNVRGRGLVLALGCLAASCTQGGATTLPTRSPDEAPGRALPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVAD
Ga0105242_100322646	3300009176	Miscanthus Rhizosphere	RSDGGCGGRSFHGPIVRPHHTGIELALSVRTRGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP*
Ga0105249_122164612	3300009553	Switchgrass Rhizosphere	VLALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVT
Ga0134125_103866572	3300010371	Terrestrial Soil	LSVRGRGLALALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTRIRQEVADGVKDFGVTASPVPREP*
Ga0134128_112928351	3300010373	Terrestrial Soil	LVLALACLAVACTRGDGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKDCGVWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP*
Ga0105239_109366712	3300010375	Corn Rhizosphere	LNVRTRGLVLALGCLAASCTRGGAATSPTGSADQTSGRGLPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPREP*
Ga0134124_119181592	3300010397	Terrestrial Soil	LNVRGRGLVLALGCLAASCTRGGATTSPTRSPDQAPGRALPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDHQAVAVLANDPKRCGVWALGLARGLSEEALTQIRQEVADGVKDFGVTASPVPR
Ga0126383_117679912	3300010398	Tropical Forest Soil	LSTRTAVAAVLFACLAVACTNGSGSTTPTPTPYPTLGDGLPATVHVGDITYDVSCTPVAEALIDVELPHAGEPKIRAVTGLWDHQAVAVLANNPKGCGVWALGLARGLSQEATAEIRQEV
Ga0134127_112866342	3300010399	Terrestrial Soil	LSVRTRGLVLALACLAVACTRGDGAATSPTPDQTPGRALPATVTVGRTTFNVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEVSTQIRQEVADGVENFGVTASPVPREP*
Ga0134122_104862922	3300010400	Terrestrial Soil	VLALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKGFGVTASPVPREP*
Ga0105246_105388852	3300011119	Miscanthus Rhizosphere	LNVRGRGLVLALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPREP*
Ga0150985_1093878872	3300012212	Avena Fatua Rhizosphere	LTARALLLVGTLLSLFACTGGTTATAPAPSIDKTAGNLPPTVKVGAVTYDVSCTPVAEALIDVELPHAGEPKIRAVTGLWDRQAVAVAANDPKRCGLWSLGLARGLTDQAGTEIRQEVADGVANFGVTASPVPRGP*
Ga0150984_1010451074	3300012469	Avena Fatua Rhizosphere	LTARALLLVGTLLSLFACTGGTTATAPAPSIDKTAGNLPPTVKVGAVTYDVSCTPVAEALIDVELPHAGEPKIRAVTGLWDRQAVAVAANDPKRCGLWSLGLARGLTDQAATEIRQEVADGVANFGVTASPVPREP*
Ga0157293_100284912	3300012898	Soil	LSVRGRGLALALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDHQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPREP*
Ga0157301_100426922	3300012911	Soil	LSVRGRGLALALGCLAASCTQGGATTSPPRSPDRAPGRALPATVTVGRTTFDVSCTPVAEALIDTELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPR
Ga0157302_100298942	3300012915	Soil	LSVRGRGLALALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKTRAVAGLWDHQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPREP*
Ga0157310_101761221	3300012916	Soil	LNVRGRGLVLAIGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLASGLSEEASTQIRQEV
Ga0164300_103955292	3300012951	Soil	LSVRSLGVVLVLGCLAISCTRGGGTTPPTGSPDQAPGHALPATVSVGHITYDVSCTPVAEALIDIGLPHAGEPAIRAVTGLWDHQAVAVLANDPKRCGVWALGLARGLSEEATTQIRREVADGVKNFGVTASPVPREP*
Ga0164299_105963612	3300012958	Soil	VALVCLAGCTGGGGGTSPTASPDPAPGEGLPATVTVGHITYDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDHQAVAVLANNPKGCGVWALGLARGLSAEATTQIRQEVADGVKNFGVTASPVPREP*
Ga0164301_101641981	3300012960	Soil	LRARSASVAIVLACLMAACTSGSGSTTPSATPDPTTGDGLPATVHVGTITYDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKGCGVWTLGLARGLSQEATTEIHQEVADGVKNFGVTASPVPREP*
Ga0164309_100562212	3300012984	Soil	LSARTAAAAIVLACLMAACTSGSGSTTPSATPDPTTGDGLPATVHVGTITYDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKGCGVWALGLARGLSQEATTEIHQEVADGVKNFGVTASPVPREP*
Ga0164309_104712921	3300012984	Soil	LSARAAAVAVALVCLAGCTGGGGGTSPTASPDPAPGEGLPATVTVGHITYDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDHQAVAVLANNPKGCGVWALGLARGLSAEATTQIRQEVADGVKNFGVTASPVPREP*
Ga0164309_104840522	3300012984	Soil	LSVRSLGVVLVLGCLAISCTRGGATTPPTGSPDQAPGHALPATVSVGHITYDVSCTPVAEALIDIELPHAGEPAIRAVTGLWDHQAVAVLANDPKRCGVWALGLARGLSEEATTQIRREVADGVKNFGVTASPVPREP*
Ga0163162_107130622	3300013306	Switchgrass Rhizosphere	LNVRTRGLVLALGCLAASCTRGGAATSPTGSADQTSGRGLPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKDCGVWALGLARGLSEEATTQIRQEVADGVKDFGVTASPVPREP*
Ga0157377_100227751	3300014745	Miscanthus Rhizosphere	ACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP
Ga0157377_108199551	3300014745	Miscanthus Rhizosphere	GGATTSPTRSPDQAPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPREP*
Ga0157376_102582972	3300014969	Miscanthus Rhizosphere	LNVRGRCLVLALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPREP*
Ga0173480_105498982	3300015200	Soil	LSVRGRGLALALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGHTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPREP*
Ga0132258_102676105	3300015371	Arabidopsis Rhizosphere	LSVRSLGVVLVLGCLAISCTRGGATTPPTGSPDQAPGHALPATVSVGHITYDVSCTPVAEALIDIELPHAGEPAIRAVTGLWDHQAVAVLANDPKRCGVWALGLARGLSEEATTQIRQEVADGVKNFGVTASPVPREP*
Ga0132256_1012849182	3300015372	Arabidopsis Rhizosphere	LSVRSLGVVLVLGCLAISCTRGGATTPPTGSPDQAPGHALPATVSVGHITYDVSCTPVAEALIDIELPHAGEPAIRAVTGLWDHQAVAVLANDPKQCGVWALGLARGLSEEATTQIRQEVADGVKNFGVTASPVPREP*
Ga0132256_1020381862	3300015372	Arabidopsis Rhizosphere	AAAIVLACLMAGCTSGSGNTTPSATPDRTPGDGLPATVHVGTITYDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKGCGVWALGLARGLSQEAMTEIHQEVADGVKNFGVTASPVPREP*
Ga0132257_1009994832	3300015373	Arabidopsis Rhizosphere	LSVRSLGLVLVLGCLAVSCTRGGATTPPTGSPDQAPGHALPATVSVGHITYDVSCTPVAEALIDIELPHAGEPAIRAVTGLWDHQAVAVLANDPKQCGVWALGLARGLSEEATTQIRQEVADGVKNFGVTASPVPREP*
Ga0207710_103068182	3300025900	Switchgrass Rhizosphere	VRTRGLVLALACLAVACTRGDGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP
Ga0207688_100166283	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VRTRGLVLALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP
Ga0207688_103135792	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	LNVRGRGLVLALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDHQAVAVLANDPKHCGVWALGLARGLSEEASTRIRQEVADGVKGFGVTASPVPREP
Ga0207685_101623402	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	LSARMVAVTAVFLCLAAACTGGGGGTSPTASPDPTPGDGLPATVSVGHITYDVSCTPVAETLIDIELPHAGGPKIRAVAGLWDHQAVAVLANNPKGCGVWALGLAQGLSPEATAEIRSEVADGVKNFGVTASPVPRQP
Ga0207645_100630783	3300025907	Miscanthus Rhizosphere	LSVRTRGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP
Ga0207659_114314481	3300025926	Miscanthus Rhizosphere	VRTRGLVLALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFNVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP
Ga0207687_100041879	3300025927	Miscanthus Rhizosphere	VRTRGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP
Ga0207687_100190742	3300025927	Miscanthus Rhizosphere	LSVRSHGLVLVLGCLVASCTRGGATTSPTGTPDPAPGHALPATVSVGHITYDVSCTPVAEALIDIELPHAGEPQIRAVTGLWDHQAVAVLANDPKRCGVWALGLARGLSEEATTQIRQEVADGVKNFGVTASPVPREP
Ga0207687_103461872	3300025927	Miscanthus Rhizosphere	LNVRGRGLVLALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEALTQIRQEVADGVKDFGVTASPVPREP
Ga0207690_102991811	3300025932	Corn Rhizosphere	TRGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP
Ga0207706_103045052	3300025933	Corn Rhizosphere	LNVRGRGLVLALGCLAASCTQGGATTSPTRSPDQAPGRTLPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPREP
Ga0207691_101033392	3300025940	Miscanthus Rhizosphere	VRTRGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFNVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP
Ga0207711_101970703	3300025941	Switchgrass Rhizosphere	ALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFNVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP
Ga0207689_103872531	3300025942	Miscanthus Rhizosphere	CLAASCTQGGATTTPTRSPDQAPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPREP
Ga0207668_102999812	3300025972	Switchgrass Rhizosphere	MLALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGVWALGLARGLSEEALTQIRQEVADGVKDFGVTASPVPREP
Ga0207677_101670253	3300026023	Miscanthus Rhizosphere	VRPHHTGVELALSVRTRGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP
Ga0207678_101382052	3300026067	Corn Rhizosphere	VRTRGLVLALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPREP
Ga0207708_100661852	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LSVRGRGLVLALGCLAASCTQGGATTSPTRSPDQAPGRALPATVTVGRTTFDVSCTPVAEALIDIELPHAGEPKIRAVAGLWDQQAVAVLANDPKHCGVWALGLARGLSEEASTRIRQEVADGVKGFGVTASPVPREP
Ga0207702_116664492	3300026078	Corn Rhizosphere	ACIAVACTGGSNPASPTAPPGAAPGGGLPATVRLGPITYDVSCTPVAEALIDVELPHAGEPKIRAITGLWDHQAVAVLANNPKQCGVWALGLARGLSEDATRQIRQEVADGVNNFGVTASPVPREP
Ga0207648_100055106	3300026089	Miscanthus Rhizosphere	VRTRGLALALACLAVACTRGGGAATSPTPDQTPGRALPATVTVGRTTFNVSCTPVAEALIDIELPHAGEPKIRPVTGLWDHQAVAVLANDPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPREP
Ga0207675_1016949472	3300026118	Switchgrass Rhizosphere	LSSSARRRLAPLLIILAGTVGCTGNGGPATTTLAPAGSSAHNLPATVHVGHITFDVSCTPVAEDLIDIELPHAGQPKIRAVTGLWDHQAVAVIANDPKGCGVWALGLARGLSQEATSQIQQEVADGVKNFGVTASPVPRQP
Ga0207698_103733413	3300026142	Corn Rhizosphere	VACTRGDGAATSPTPDQTPGRALPATVTVGRTTFNVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANEPKHCGIWALGLARGLSEEASTQIRQEVADGVENFGVTASPVPRE
Ga0209152_100197763	3300026325	Soil	VTSPTSPPHSTPGGGLPSTVTVGRVTYDVSCTPVAETLIDIELPHAGEPKIRAVTGLWDRQAVAVLANDPKGCGMWALGLARGLSTEAMTQIRQEVADGVKNFGVTASPVPREP
Ga0307280_101168071	3300028768	Soil	LSSGDRRRLAPLLLLVIAVGCTANGSPDATTPAPIGSSAHSLPATVSVGHITFDVSCTPVAEALVDIELPHAGEPKIRAVTGLWDHQAVAVLANNPKGCGVWALGLARGLSQEATAQIQQEVADGVKNFGVTASP
Ga0307288_102740701	3300028778	Soil	VTVGVLLSFGVACTGATHSTAPTPVETTPLPAGLPATVKVGSTTYDVSCTPVAETLVDIELPHTGEPKIRAVTGLWDHQAVAVLANDPKACGLWALGLARGLSPEVGTEIRQEV
Ga0247826_100595323	3300030336	Soil	LSVRGRGLVLALGCLAASCTQGGATTTPTRSPDQAPGRAMPATVTVERTTFDVSCTPVAEALIDIELPHAGEPKIRAVTGLWDHQAVAVLANDPKHCGVWALGLARGLSEEASTQIRQEVADGVKDFGVTASPVPREP
Ga0307468_1000129143	3300031740	Hardwood Forest Soil	LSSSARRRLAFLLLLVVGCTGNGSPDTTPAPVGSSGHNLPATVHVGHITFDVSCTPVAEDLIDIELPHAGEPKIRAVTGLWDHQAVAVIANDPKGCGVWALGLARGLSPEATTQIQQEVADGVKNFGVTASPVPRQP
Ga0308175_1000893283	3300031938	Soil	LSARLAVSAAVLATFAAACTGGGTVITPPTSSGDATLPNGLPATVESGHVTYDVSCTPVAETLIDIELPHAGEPKIRAVTGLWDRQAVAVLANNPKGCGVWALGLATGLSQEATAEIRQEVADGVKNFGVTASPVPHEP
Ga0308176_118231682	3300031996	Soil	TGGGTVITPPTSSGDATLPNGLPATVESGHVTYDVSCTPVAETLIDIELPHAGEPKIRAVTGLWDRQAVAVLANNPKGCGVWALGLATGLSQEATAEIRQEVADGVKNFGVTASPVPHEP
Ga0373948_0145548_92_508	3300034817	Rhizosphere Soil	LSVRSLGVVLVLGCLAISCTGGGTTTPPTGSPDQAPGHALPATVSVGHITYDVSCTPVAEALIDIELPHAGEPAIRAVTGLWDHQAVAVLANDPKRCGVWALGLARGLSEEATTQIRQEVADGVKNFGVTASPVPREP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081844

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences