Metagenome Family F081817

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081817
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	85 residues
Representative Sequence	QDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK
Number of Associated Samples	104
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.02 %
% of genes near scaffold ends (potentially truncated)	92.98 %
% of genes from short scaffolds (< 2000 bps)	78.95 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.491 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (11.403 % of family members)
Environment Ontology (ENVO)	Unclassified (35.088 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.404 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.40% β-sheet: 0.00% Coil/Unstructured: 50.60%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF01925	TauE	9.65
PF07237	DUF1428	4.39
PF00239	Resolvase	1.75
PF01507	PAPS_reduct	1.75
PF05957	DUF883	1.75
PF04832	SOUL	0.88
PF05988	DUF899	0.88
PF00285	Citrate_synt	0.88
PF09992	NAGPA	0.88
PF06073	DUF934	0.88
PF02518	HATPase_c	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	9.65
COG5507	Uncharacterized conserved protein YbaA, DUF1428 family	Function unknown [S]	4.39
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.75
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.75
COG4575	Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family	Translation, ribosomal structure and biogenesis [J]	1.75
COG0372	Citrate synthase	Energy production and conversion [C]	0.88
COG3749	Uncharacterized conserved protein, DUF934 family	Function unknown [S]	0.88
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.49 %
Unclassified	root	N/A	3.51 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.49 %
Unclassified	root	N/A	3.51 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.49 %
Unclassified	root	N/A	3.51 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	93.86 %
Unclassified	root	N/A	3.51 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	92.11 %
Unclassified	root	N/A	3.51 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	91.23 %
Unclassified	root	N/A	3.51 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	88.60 %
Unclassified	root	N/A	3.51 %

Name	Rank	Taxonomy	Distribution
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	85.09 %
Unclassified	root	N/A	3.51 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	1.75 %

Name	Rank	Taxonomy	Distribution
Methyloceanibacter methanicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	73.68 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	6.14 %
Unclassified	root	N/A	3.51 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.75 %
unclassified Methyloceanibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → unclassified Methyloceanibacter	0.88 %

Name	Rank	Taxonomy	Distribution
Methyloceanibacter methanicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	73.68 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	6.14 %
Unclassified	root	N/A	3.51 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.75 %
Methyloceanibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → unclassified Methyloceanibacter → Methyloceanibacter sp.	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y02G69IE	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	698	Open in IMG/M
3300001431\|F14TB_101762439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	655	Open in IMG/M
3300001991\|JGI24743J22301_10031813	Not Available	1040	Open in IMG/M
3300002070\|JGI24750J21931_1022703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	887	Open in IMG/M
3300002239\|JGI24034J26672_10046951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	735	Open in IMG/M
3300003990\|Ga0055455_10168431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	676	Open in IMG/M
3300004063\|Ga0055483_10177596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → unclassified Methyloceanibacter → Methyloceanibacter sp.	686	Open in IMG/M
3300004114\|Ga0062593_100916002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	888	Open in IMG/M
3300005328\|Ga0070676_10060860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2243	Open in IMG/M
3300005328\|Ga0070676_10182135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1366	Open in IMG/M
3300005331\|Ga0070670_101091655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	727	Open in IMG/M
3300005332\|Ga0066388_103447697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	807	Open in IMG/M
3300005332\|Ga0066388_106999193	Not Available	567	Open in IMG/M
3300005334\|Ga0068869_100350288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1204	Open in IMG/M
3300005338\|Ga0068868_101083258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	736	Open in IMG/M
3300005339\|Ga0070660_100149524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1877	Open in IMG/M
3300005341\|Ga0070691_10034740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	2374	Open in IMG/M
3300005343\|Ga0070687_100095005	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300005439\|Ga0070711_101961608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	515	Open in IMG/M
3300005440\|Ga0070705_100556155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	880	Open in IMG/M
3300005440\|Ga0070705_101116788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	646	Open in IMG/M
3300005441\|Ga0070700_100085921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2042	Open in IMG/M
3300005444\|Ga0070694_101675481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	540	Open in IMG/M
3300005456\|Ga0070678_100536901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1037	Open in IMG/M
3300005459\|Ga0068867_101833433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	571	Open in IMG/M
3300005536\|Ga0070697_101929267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	529	Open in IMG/M
3300005544\|Ga0070686_100204557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1417	Open in IMG/M
3300005546\|Ga0070696_100062170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2613	Open in IMG/M
3300005547\|Ga0070693_101017883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	627	Open in IMG/M
3300005563\|Ga0068855_100263558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1919	Open in IMG/M
3300005564\|Ga0070664_100135959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	2161	Open in IMG/M
3300005577\|Ga0068857_100073025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	3056	Open in IMG/M
3300005614\|Ga0068856_100638205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1086	Open in IMG/M
3300005618\|Ga0068864_100040815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	3968	Open in IMG/M
3300005764\|Ga0066903_101187668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1415	Open in IMG/M
3300005842\|Ga0068858_100008947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9597	Open in IMG/M
3300006163\|Ga0070715_10390261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	771	Open in IMG/M
3300006845\|Ga0075421_100934859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	987	Open in IMG/M
3300006847\|Ga0075431_101925590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	547	Open in IMG/M
3300006854\|Ga0075425_100903750	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300006854\|Ga0075425_102019779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	644	Open in IMG/M
3300006871\|Ga0075434_100470970	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300007076\|Ga0075435_100904713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	770	Open in IMG/M
3300009094\|Ga0111539_10462898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1477	Open in IMG/M
3300009100\|Ga0075418_12240608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	596	Open in IMG/M
3300009148\|Ga0105243_10704335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	985	Open in IMG/M
3300009148\|Ga0105243_11288849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	747	Open in IMG/M
3300009162\|Ga0075423_12303072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	586	Open in IMG/M
3300009177\|Ga0105248_10188282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	2325	Open in IMG/M
3300009177\|Ga0105248_11482157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	768	Open in IMG/M
3300009551\|Ga0105238_11813558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	642	Open in IMG/M
3300009553\|Ga0105249_10036973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	4430	Open in IMG/M
3300009807\|Ga0105061_1023099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	842	Open in IMG/M
3300009837\|Ga0105058_1052747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	912	Open in IMG/M
3300010362\|Ga0126377_11144642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	848	Open in IMG/M
3300010373\|Ga0134128_10081506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3695	Open in IMG/M
3300010396\|Ga0134126_13095677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	501	Open in IMG/M
3300010399\|Ga0134127_10031361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	4248	Open in IMG/M
3300010399\|Ga0134127_10137396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	2200	Open in IMG/M
3300010401\|Ga0134121_10860250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	877	Open in IMG/M
3300011119\|Ga0105246_10072643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	2426	Open in IMG/M
3300012897\|Ga0157285_10118527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	751	Open in IMG/M
3300012906\|Ga0157295_10227987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	611	Open in IMG/M
3300012907\|Ga0157283_10010261	All Organisms → cellular organisms → Bacteria → Proteobacteria	1554	Open in IMG/M
3300012913\|Ga0157298_10035992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1055	Open in IMG/M
3300012915\|Ga0157302_10197312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	719	Open in IMG/M
3300013105\|Ga0157369_10072853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	3686	Open in IMG/M
3300013306\|Ga0163162_10046330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	4357	Open in IMG/M
3300013308\|Ga0157375_10003280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	14031	Open in IMG/M
3300014325\|Ga0163163_10238777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1867	Open in IMG/M
3300015200\|Ga0173480_10762901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	613	Open in IMG/M
3300015371\|Ga0132258_13415076	Not Available	1090	Open in IMG/M
3300015372\|Ga0132256_100573417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1242	Open in IMG/M
3300015372\|Ga0132256_101829335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	715	Open in IMG/M
3300021560\|Ga0126371_10040555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4409	Open in IMG/M
3300022899\|Ga0247795_1032886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	850	Open in IMG/M
3300023263\|Ga0247800_1134303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	524	Open in IMG/M
3300025552\|Ga0210142_1095568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	586	Open in IMG/M
3300025899\|Ga0207642_10854482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	581	Open in IMG/M
3300025913\|Ga0207695_11763622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	500	Open in IMG/M
3300025915\|Ga0207693_10012661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	6814	Open in IMG/M
3300025915\|Ga0207693_10581229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	873	Open in IMG/M
3300025918\|Ga0207662_10196797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1303	Open in IMG/M
3300025927\|Ga0207687_11096633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	684	Open in IMG/M
3300025927\|Ga0207687_11114316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	678	Open in IMG/M
3300025931\|Ga0207644_10871185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	754	Open in IMG/M
3300025939\|Ga0207665_10087070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	2159	Open in IMG/M
3300025941\|Ga0207711_10169275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1982	Open in IMG/M
3300025942\|Ga0207689_10016283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	6298	Open in IMG/M
3300025949\|Ga0207667_10670305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1041	Open in IMG/M
3300026023\|Ga0207677_11899167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	553	Open in IMG/M
3300026041\|Ga0207639_10027770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	4126	Open in IMG/M
3300026089\|Ga0207648_11523299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	629	Open in IMG/M
3300026121\|Ga0207683_10398675	Not Available	1266	Open in IMG/M
3300027049\|Ga0207806_1033975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	584	Open in IMG/M
3300027907\|Ga0207428_10732367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	706	Open in IMG/M
3300028379\|Ga0268266_10291777	All Organisms → cellular organisms → Bacteria → Proteobacteria	1519	Open in IMG/M
3300028589\|Ga0247818_11134528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	557	Open in IMG/M
3300031359\|Ga0307426_1173290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	747	Open in IMG/M
3300031545\|Ga0318541_10800826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	526	Open in IMG/M
3300031733\|Ga0316577_10213945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1089	Open in IMG/M
3300031740\|Ga0307468_100872177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	777	Open in IMG/M
3300031854\|Ga0310904_10776852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	668	Open in IMG/M
3300031896\|Ga0318551_10723835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	577	Open in IMG/M
3300031897\|Ga0318520_11061226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	513	Open in IMG/M
3300031908\|Ga0310900_10059274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	2290	Open in IMG/M
3300031912\|Ga0306921_11205249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	843	Open in IMG/M
3300032012\|Ga0310902_11065889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	564	Open in IMG/M
3300032059\|Ga0318533_10612723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	799	Open in IMG/M
3300032061\|Ga0315540_10168008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	967	Open in IMG/M
3300032075\|Ga0310890_10982026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	678	Open in IMG/M
3300032122\|Ga0310895_10503837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	609	Open in IMG/M
3300032892\|Ga0335081_10312909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	2072	Open in IMG/M
3300033551\|Ga0247830_10386025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1088	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	50.88%
Host-Associated	Host-Associated	48.25%
Engineered	Engineered	0.88%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	48.25%
Terrestrial	Environmental → Terrestrial	46.49%
Aquatic	Environmental → Aquatic	4.39%
Solid Waste	Engineered → Solid Waste	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.42%
Marine	Environmental → Aquatic → Marine	4.39%
Roots	Host-Associated → Plants → Roots	0.88%
Grass	Engineered → Solid Waste → Grass	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.05%
Loam	Environmental → Terrestrial → Soil → Loam	18.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.89%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.63%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.75%
Sand	Environmental → Terrestrial → Soil → Sand	1.75%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.88%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.88%
Composting	Engineered → Solid Waste → Grass → Composting	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.51%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.63%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.75%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.88%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.88%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.39%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.51%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.51%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.75%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.75%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.88%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004063	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300025552	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027049	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300031359	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-40	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031733	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032061	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-10	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_04046780	2170459017	Switchgrass, Maize And Mischanthus Litter	MWGREVDDTKNDPWRWSTYISHCAVRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVIRQRNTNGRTFYEAASGNGK
F14TB_1017624392	3300001431	Soil	DDTKNDPWRWSTYISHCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVVRQRNTNGRTFYEPGSGKGK*
JGI24743J22301_100318133	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	DDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
JGI24750J21931_10227032	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	MWGREVDDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
JGI24034J26672_100469511	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	MRARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0055455_101684311	3300003990	Natural And Restored Wetlands	GHEVDDTKNDPWRWSTYITHCAVRWMRNPHKWTREDTDDFYDAMIETAAICAAAAESVIRQRKENGHTFYEPASGHS*
Ga0055483_101775961	3300004063	Natural And Restored Wetlands	PWRWSTYIAHSAVRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESIARQRKENGHTFYEPT*
Ga0062593_1009160022	3300004114	Soil	MRARAVQDRMWGREVDDTKNDPWRWSTYISHCAVRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVIRQRNTNGRTFYEAASGNGK*
Ga0070676_100608601	3300005328	Miscanthus Rhizosphere	ARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0070676_101821353	3300005328	Miscanthus Rhizosphere	AVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0070670_1010916552	3300005331	Switchgrass Rhizosphere	ARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0066388_1034476971	3300005332	Tropical Forest Soil	KKLEEYPLRGDPSVFDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAVRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVIRQRNTNGRTFYEPASGNGK*
Ga0066388_1069991931	3300005332	Tropical Forest Soil	NDPWRWSTYISHCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESIARQRNTNGRTFYEPESGNGK*
Ga0068869_1003502881	3300005334	Miscanthus Rhizosphere	NDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0068868_1010832582	3300005338	Miscanthus Rhizosphere	QDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0070660_1001495241	3300005339	Corn Rhizosphere	EEYPLRGDPSVFDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0070691_100347405	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	EVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0070687_1000950054	3300005343	Switchgrass Rhizosphere	TKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0070711_1019616081	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	DDTKNDPWRWSTYISHCSVRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNEDGRTFYEPASGNIK*
Ga0070705_1005561553	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	REVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0070705_1011167882	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	GREVDDTKNDPWRWSTYISQCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNTNGRTFYEPASGNSE*
Ga0070700_1000859211	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	DDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0070694_1016754811	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	NLEEYPLRGDPSVFDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISQCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVVRQRNTNGRTFYEPGSGKGK*
Ga0070678_1005369013	3300005456	Miscanthus Rhizosphere	WSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0068867_1018334332	3300005459	Miscanthus Rhizosphere	DDTKNDPWRWSTYISHSAVRWMRDPHKWTREDTDDFYDAMTETAAICAAAAESVLRQRNKNGRTFYEPGYK*
Ga0070697_1019292672	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AVQDRMWGREVDDTKNDPWRWSTYISQCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVVRQRNTNGRTFYEPASGHGK*
Ga0070686_1002045573	3300005544	Switchgrass Rhizosphere	RAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0070696_1000621706	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	WRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0070693_1010178831	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	DTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0068855_1002635585	3300005563	Corn Rhizosphere	QDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0070664_1001359596	3300005564	Corn Rhizosphere	LRGDPSVFDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0068857_1000730251	3300005577	Corn Rhizosphere	DRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0068856_1006382053	3300005614	Corn Rhizosphere	RMWGREVDDTKNDPWRWSTYISHCAVRWMCDPHKWTREDIDDFYDVMIETAAICAAAAESIVRQRNTNGRTFYEPASGHGK*
Ga0068864_10004081510	3300005618	Switchgrass Rhizosphere	VQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0066903_1011876681	3300005764	Tropical Forest Soil	MWGREVDDTKNDPWRWSTYISHCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESIVRQRNTSGRTFYEPESGSGK*
Ga0068858_10000894712	3300005842	Switchgrass Rhizosphere	KNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0070715_103902611	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	RMWGREVDDTKNDPWRWSTYISHCAVRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVIRQRNTNGRTFYEATSGNGK*
Ga0075421_1009348591	3300006845	Populus Rhizosphere	VQDRMWGREVDDTKNDPWRWSTYISQCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNTNGRTFYEPGSGSGK*
Ga0075431_1019255901	3300006847	Populus Rhizosphere	IMRARAVQDRMWGREVDDTKNYPWRWSTYISHCAVRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESIVRQRNTNGRTFYEPASGHGK*
Ga0075425_1009037503	3300006854	Populus Rhizosphere	WGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0075425_1020197793	3300006854	Populus Rhizosphere	GDPSVFDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISQCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNTNGRTFYEPGSGSGK*
Ga0075434_1004709701	3300006871	Populus Rhizosphere	DRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0075435_1009047131	3300007076	Populus Rhizosphere	VDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0111539_104628981	3300009094	Populus Rhizosphere	MDDTRNDPWRWSAYISQSAIRWMRDPHRWSREDTDDFYDAMIETAAICAAAAESVVRQRNTNGRTFYEPASGNEK*
Ga0075418_122406081	3300009100	Populus Rhizosphere	RAVQDRMWGREVDDTKNDPWRWSTYISRCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVVRQRNTNGRTFYEPASGHGK*
Ga0105243_107043352	3300009148	Miscanthus Rhizosphere	AIQDRMWGREVDDTKNDPWRWSTYISQCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNTNGRTFYEPASGNSE*
Ga0105243_112888492	3300009148	Miscanthus Rhizosphere	FDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0075423_123030721	3300009162	Populus Rhizosphere	ARAVQDRMWGREVDDTKNDPWRWSTYISQCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNTNGRTFYEPGSGSGK*
Ga0105248_101882821	3300009177	Switchgrass Rhizosphere	NLEEYPLRGDPSVFDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0105248_114821571	3300009177	Switchgrass Rhizosphere	HIMRVRAVQDRMWGHEIDDTKNDPWRWSTYISHSAVRWMRDPHKWTREDTDDFYDAMTETAAICAAAAESVLRQRNKNGRTFYEPGYK*
Ga0105238_118135581	3300009551	Corn Rhizosphere	DQIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0105249_100369736	3300009553	Switchgrass Rhizosphere	EVYPLRGDPGVFNQNMRARAVQDRMWGRAVDDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0105061_10230992	3300009807	Groundwater Sand	DPAVFDHIMRVRAVQDRMWGHKMDDTKNDPWRWSAYISQCAIRWIRDPHKWTREDTDDFYDAMIETAAICAAAAESILRQRNENGRTFYEPASGER*
Ga0105058_10527473	3300009837	Groundwater Sand	RMWGHEMDDTKNDPWRWSAYISQCAVRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNKNGRTFFEPAR*
Ga0126377_111446422	3300010362	Tropical Forest Soil	MWGREVDDTKNDPWRWSTYISHCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVIRQRNTNGRTFYEAASGNGK*
Ga0134128_100815061	3300010373	Terrestrial Soil	YPLRGDPSVFDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNSNGRTFYEPASGNGK*
Ga0134126_130956772	3300010396	Terrestrial Soil	RMWGREVDDTKNDPWRWSTYISYCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVVRQRNTNGRTFYEPASGHGK*
Ga0134127_100313611	3300010399	Terrestrial Soil	DDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYNAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0134127_101373961	3300010399	Terrestrial Soil	HIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAVRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0134121_108602502	3300010401	Terrestrial Soil	WRWSTYISHCAVRWMRDPHKWTREDTDDFYDAMIETAAVCAAAAESVLRQRNKDGRTFYEPASGNRE*
Ga0105246_100726436	3300011119	Miscanthus Rhizosphere	AVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0157285_101185272	3300012897	Soil	ARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0157295_102279872	3300012906	Soil	DRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0157283_100102611	3300012907	Soil	DDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0157298_100359921	3300012913	Soil	RMWGREVDDTKNDPWRWSTYISHCAIPWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0157302_101973122	3300012915	Soil	SRKNLEEYPLRGDPSVFDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0157369_100728538	3300013105	Corn Rhizosphere	RARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0163162_100463307	3300013306	Switchgrass Rhizosphere	NLEEYPLRGDPSVFDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0157375_1000328016	3300013308	Miscanthus Rhizosphere	VQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK*
Ga0163163_102387771	3300014325	Switchgrass Rhizosphere	RMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK*
Ga0173480_107629012	3300015200	Soil	QDRMWGREVDDTKNDPWRWSTYISQCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNTNGRTFYEPASGHGK*
Ga0132258_134150761	3300015371	Arabidopsis Rhizosphere	KNDPWRWSTYISHCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESIARQRNTNGRTFYEPESGNGK*
Ga0132256_1005734172	3300015372	Arabidopsis Rhizosphere	VGSEMDDIKNDPWRWSTYISHCAVRWMRDPHKWTREDTDDFYDAMIETAAVCAAAAESVLRQRNKDGRTFYEPASGNRE*
Ga0132256_1018293352	3300015372	Arabidopsis Rhizosphere	AVQDRMWGREVDDTKNDPWRWSTYISQCAVRWLRDPHKWTREDTDNFYDAMTETAAICAAAAESVLRQRNKNGRTFYEPGYK*
Ga0126371_100405551	3300021560	Tropical Forest Soil	SVFDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAVRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVIRQRNTNGRTFYEPASGNGK
Ga0247795_10328862	3300022899	Soil	LRGDPSVFDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK
Ga0247800_11343031	3300023263	Soil	YPLRGDPSVFDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK
Ga0210142_10955681	3300025552	Natural And Restored Wetlands	HEVDDTKNDPWRWSTYITHCAVRWMRNPHKWTREDTDDFYDAMIETAAICAAAAESVIRQRKENGHTFYEPASGHS
Ga0207642_108544822	3300025899	Miscanthus Rhizosphere	DDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIEAAAICAAAAESVLRQRNSNGRTFYEPASGNGK
Ga0207695_117636222	3300025913	Corn Rhizosphere	TKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK
Ga0207693_1001266111	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK
Ga0207693_105812291	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LEEYPLCGDPSVLDQIMRARAIQDRMWGREVDDTKNDPWRWSTYISQCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNTNGRTFYEPASGNSE
Ga0207662_101967974	3300025918	Switchgrass Rhizosphere	MWGREVDDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK
Ga0207687_110966332	3300025927	Miscanthus Rhizosphere	AVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK
Ga0207687_111143162	3300025927	Miscanthus Rhizosphere	RMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK
Ga0207644_108711852	3300025931	Switchgrass Rhizosphere	IQDRMWGREVDDTKNDPWRWSTYISQCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNTNGRTFYEPASGNSE
Ga0207665_100870705	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	RKNLEEYPLRGDPSVFDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK
Ga0207711_101692755	3300025941	Switchgrass Rhizosphere	DTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK
Ga0207689_100162831	3300025942	Miscanthus Rhizosphere	IMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK
Ga0207667_106703053	3300025949	Corn Rhizosphere	QDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK
Ga0207677_118991671	3300026023	Miscanthus Rhizosphere	RSGQVVGREVDDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK
Ga0207639_100277701	3300026041	Corn Rhizosphere	GDPSVFDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK
Ga0207648_115232992	3300026089	Miscanthus Rhizosphere	FDHIMRVRAVQDRMWGHEIDDTKNDPWRWSTYISHSAVRWMRDPHKWTREDTDDFYDAMTETAAICAAAAESVLRQRNKNGRTFYEPGYK
Ga0207683_103986751	3300026121	Miscanthus Rhizosphere	KNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK
Ga0207806_10339752	3300027049	Tropical Forest Soil	AVQDRMWGREVDDTKNDPWRWNTYISHCAVRWMRDPHKWTREDTEDFYDAMIETAAICAAAAESVVRQRNTNGRTFYEPVLGNGK
Ga0207428_107323672	3300027907	Populus Rhizosphere	LCGDPSVFDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISQCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNTNGRTFYEPGSGSGK
Ga0268266_102917774	3300028379	Switchgrass Rhizosphere	RMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK
Ga0247818_111345281	3300028589	Soil	TKNDPWRWSTYISHCAVRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESIVRQRNTNGRTFYEPASGHGK
Ga0307426_11732902	3300031359	Salt Marsh	LEEYPLRGDPEVFDNIMRVRAVQDRMWGHEVDDTRNDPWRWSTYIAHSAVRWMRDPHKWTREDTNDFYDAMIETAAICAAAAESISRQRKENGHTFYEPA
Ga0318541_108008261	3300031545	Soil	EYPLCGDPSVFDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVARQRNTNGRTFYEPASGNGR
Ga0316577_102139451	3300031733	Rhizosphere	EYPLCGDPAVFDEIMRFRAVQSRMWGNKVDDTINDPWRWSAYISHCAVRWMRDPHKWTREDTDEFYDAMIETAAICAAAAESITRQRTENGHTFYEPPSAKSQSD
Ga0307468_1008721771	3300031740	Hardwood Forest Soil	LEEYPLCGDPNVFDHIMRVRAVQDRMWGHEIDDTKNDPWRWNTYISHCAVRWMRDPHKWTREDTDDFYDAMTETAAICAAAAESVLRQRNKNGRTFYEPGDK
Ga0310904_107768521	3300031854	Soil	DRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK
Ga0318551_107238352	3300031896	Soil	LMRARAVQDRLWGREVDDTKNDPWRWSTYISHCAIRWLRDPYKWTREDTDDFYDAMIETAAICAAAAESVIRQRNTNGRTFYEPASGNVK
Ga0318520_110612261	3300031897	Soil	MRARAVQDRLWGREVDDTKNDPWRWSTYISHCAIRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVARQRNTNGRTFYEPASGNGR
Ga0310900_100592746	3300031908	Soil	DPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK
Ga0306921_112052491	3300031912	Soil	EEYPLRGDPSVFDEIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVARQRNTNGRTFYEPASGNGR
Ga0310902_110658891	3300032012	Soil	TKNDPWRWSTYISHCAIRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPASGNGK
Ga0318533_106127231	3300032059	Soil	MRARAVQDRLWGREVDDTKNDPWRWSTYISHCAIRWLRDPYKWTREDTDDFYDAMIETAAICAAAAESVVRQRNTNGRTFYEPASGNGR
Ga0315540_101680081	3300032061	Salt Marsh Sediment	CGDPQVFDNIMRVRAVQDRMWGHEVDDTRNDPWRWSTYIAHSAVRWMRDPHKWTREDTDDFYDAMIETAAICAAAAESIARQRKENGHTFYEPASGHF
Ga0310890_109820262	3300032075	Soil	YPLCGDPSVFDQIMRARAIQDRMWGREVDDTKNDPWRWSTYISQCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVLRQRNTNGRTFYEPASGNSE
Ga0310895_105038371	3300032122	Soil	KNLEEYPLRGDPSVFDQIMRARAVQDRMWGREVDDTKNDPWRWSTYISHCAIRWMRDPHNWTREDTDDFYDAMIETAAICAAAAESVLRQRNANGRTFYEPAPGNGK
Ga0335081_103129094	3300032892	Soil	HEMDDIKNDPWRWSTYISHCAVRWMRDPHKWTREDTDDFYDAMIETAAVCAAAAESVLRQRNKDGRTFYEPAAGNRE
Ga0247830_103860251	3300033551	Soil	DRMWGREVDDTKNDPWRWSTYISHCAVRWLRDPHKWTREDTDDFYDAMIETAAICAAAAESVVRQRNTNGRTFYEPGSGKGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081817

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences