Metagenome Family F081801

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F081801
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	72 residues
Representative Sequence	VTGLLAILVLLATDAGTLGTPDGGVRGPPPASRSAEDEEIIQNLDLLEHLAESQELEMMLELEARRGQTDR
Number of Associated Samples	97
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.30 %
% of genes near scaffold ends (potentially truncated)	36.84 %
% of genes from short scaffolds (< 2000 bps)	79.82 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (76.316 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.807 % of family members)
Environment Ontology (ENVO)	Unclassified (24.561 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (38.596 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 55.56% β-sheet: 0.00% Coil/Unstructured: 44.44%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF11304	DUF3106	44.74
PF01544	CorA	7.89
PF08281	Sigma70_r4_2	4.39
PF03466	LysR_substrate	4.39
PF00154	RecA	3.51
PF13490	zf-HC2	1.75
PF02550	AcetylCoA_hydro	0.88
PF13280	WYL	0.88
PF13336	AcetylCoA_hyd_C	0.88
PF00990	GGDEF	0.88
PF00069	Pkinase	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	7.89
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	3.51
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.51
COG0427	Propionyl CoA:succinate CoA transferase	Energy production and conversion [C]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.32 %
Unclassified	root	N/A	23.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.32 %
Unclassified	root	N/A	23.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.32 %
Unclassified	root	N/A	23.68 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	71.05 %
Unclassified	root	N/A	23.68 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	61.40 %
Unclassified	root	N/A	23.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	61.40 %
Unclassified	root	N/A	23.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	61.40 %
Unclassified	root	N/A	23.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	50.00 %
Unclassified	root	N/A	23.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	43.86 %
Unclassified	root	N/A	23.68 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	6.14 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Myxococcaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae	36.84 %
Unclassified	root	N/A	23.68 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	5.26 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	0.88 %
Hyalangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Name	Rank	Taxonomy	Distribution
Myxococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	36.84 %
Unclassified	root	N/A	23.68 %
Myxococcus fulvus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus fulvus	4.39 %
Stigmatella aurantiaca	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	0.88 %
Hyalangium minutum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium → Hyalangium minutum	0.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_5776501	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
2162886012\|MBSR1b_contig_12705093	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	2642	Open in IMG/M
2170459010\|GIO7OMY02JOA2C	Not Available	508	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101635258	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella → Stigmatella aurantiaca	2211	Open in IMG/M
3300000955\|JGI1027J12803_101217416	All Organisms → cellular organisms → Bacteria → Proteobacteria	1611	Open in IMG/M
3300001990\|JGI24737J22298_10139201	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	717	Open in IMG/M
3300002155\|JGI24033J26618_1076483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	508	Open in IMG/M
3300003659\|JGI25404J52841_10018926	All Organisms → cellular organisms → Bacteria → Proteobacteria	1492	Open in IMG/M
3300004114\|Ga0062593_100718399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus fulvus	978	Open in IMG/M
3300005093\|Ga0062594_100005591	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus fulvus	3925	Open in IMG/M
3300005329\|Ga0070683_100611331	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1043	Open in IMG/M
3300005332\|Ga0066388_100051569	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus fulvus	4233	Open in IMG/M
3300005332\|Ga0066388_100347189	Not Available	2130	Open in IMG/M
3300005337\|Ga0070682_101556564	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	570	Open in IMG/M
3300005338\|Ga0068868_101349064	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus fulvus	664	Open in IMG/M
3300005444\|Ga0070694_100602301	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus fulvus	885	Open in IMG/M
3300005456\|Ga0070678_100291773	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1383	Open in IMG/M
3300005614\|Ga0068856_100531827	All Organisms → cellular organisms → Bacteria → Proteobacteria	1197	Open in IMG/M
3300005764\|Ga0066903_102881630	Not Available	933	Open in IMG/M
3300005764\|Ga0066903_108220693	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300005841\|Ga0068863_100931138	All Organisms → cellular organisms → Bacteria → Proteobacteria	870	Open in IMG/M
3300005983\|Ga0081540_1000122	All Organisms → cellular organisms → Bacteria → Proteobacteria	82113	Open in IMG/M
3300005983\|Ga0081540_1000344	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	47266	Open in IMG/M
3300005983\|Ga0081540_1009179	All Organisms → cellular organisms → Bacteria	6823	Open in IMG/M
3300006163\|Ga0070715_10553214	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	667	Open in IMG/M
3300006173\|Ga0070716_101311808	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	585	Open in IMG/M
3300006755\|Ga0079222_11531295	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	627	Open in IMG/M
3300006806\|Ga0079220_10390118	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	904	Open in IMG/M
3300006854\|Ga0075425_100654869	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1207	Open in IMG/M
3300006903\|Ga0075426_10663602	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	781	Open in IMG/M
3300006904\|Ga0075424_100311856	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1675	Open in IMG/M
3300007076\|Ga0075435_101257862	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300009162\|Ga0075423_12615093	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	552	Open in IMG/M
3300009168\|Ga0105104_10000047	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	78300	Open in IMG/M
3300010043\|Ga0126380_10797153	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300010046\|Ga0126384_10824090	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	832	Open in IMG/M
3300010046\|Ga0126384_11206385	Not Available	698	Open in IMG/M
3300010048\|Ga0126373_11916863	Not Available	655	Open in IMG/M
3300010358\|Ga0126370_12482295	Not Available	516	Open in IMG/M
3300010361\|Ga0126378_10769204	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300010361\|Ga0126378_11487289	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	768	Open in IMG/M
3300010366\|Ga0126379_12541598	Not Available	610	Open in IMG/M
3300010376\|Ga0126381_100338224	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	2076	Open in IMG/M
3300010376\|Ga0126381_100402618	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1907	Open in IMG/M
3300010376\|Ga0126381_100893900	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1278	Open in IMG/M
3300010396\|Ga0134126_12803097	Not Available	528	Open in IMG/M
3300012971\|Ga0126369_12379717	Not Available	616	Open in IMG/M
3300013100\|Ga0157373_10445593	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	931	Open in IMG/M
3300014497\|Ga0182008_10065050	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1795	Open in IMG/M
3300015262\|Ga0182007_10270388	Not Available	615	Open in IMG/M
3300015371\|Ga0132258_10595434	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	2775	Open in IMG/M
3300015371\|Ga0132258_12524073	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300015372\|Ga0132256_101598507	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300015373\|Ga0132257_100119638	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	3058	Open in IMG/M
3300015373\|Ga0132257_100817374	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1164	Open in IMG/M
3300015374\|Ga0132255_100197711	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	2841	Open in IMG/M
3300017947\|Ga0187785_10109907	All Organisms → cellular organisms → Bacteria → Proteobacteria	1114	Open in IMG/M
3300017959\|Ga0187779_10262557	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1096	Open in IMG/M
3300017966\|Ga0187776_10154155	Not Available	1415	Open in IMG/M
3300021445\|Ga0182009_10004819	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	4192	Open in IMG/M
3300021445\|Ga0182009_10639671	Not Available	572	Open in IMG/M
3300025885\|Ga0207653_10178214	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	794	Open in IMG/M
3300025912\|Ga0207707_10213073	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1682	Open in IMG/M
3300025920\|Ga0207649_10006421	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6385	Open in IMG/M
3300026088\|Ga0207641_10297687	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1523	Open in IMG/M
3300026121\|Ga0207683_10235592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1669	Open in IMG/M
3300027743\|Ga0209593_10013773	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	3322	Open in IMG/M
3300027765\|Ga0209073_10478245	Not Available	522	Open in IMG/M
3300031543\|Ga0318516_10376907	Not Available	818	Open in IMG/M
3300031543\|Ga0318516_10550234	Not Available	661	Open in IMG/M
3300031544\|Ga0318534_10109503	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1584	Open in IMG/M
3300031549\|Ga0318571_10277421	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	624	Open in IMG/M
3300031572\|Ga0318515_10009495	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	4280	Open in IMG/M
3300031572\|Ga0318515_10639558	Not Available	564	Open in IMG/M
3300031572\|Ga0318515_10678520	Not Available	546	Open in IMG/M
3300031668\|Ga0318542_10234624	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	931	Open in IMG/M
3300031680\|Ga0318574_10081328	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1767	Open in IMG/M
3300031713\|Ga0318496_10099210	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1561	Open in IMG/M
3300031716\|Ga0310813_10143075	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	1916	Open in IMG/M
3300031720\|Ga0307469_10537769	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1032	Open in IMG/M
3300031723\|Ga0318493_10191459	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1076	Open in IMG/M
3300031765\|Ga0318554_10158878	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1284	Open in IMG/M
3300031768\|Ga0318509_10299499	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	900	Open in IMG/M
3300031797\|Ga0318550_10158556	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1089	Open in IMG/M
3300031805\|Ga0318497_10094014	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1602	Open in IMG/M
3300031821\|Ga0318567_10224540	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1051	Open in IMG/M
3300031890\|Ga0306925_10590357	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1174	Open in IMG/M
3300031893\|Ga0318536_10694559	Not Available	507	Open in IMG/M
3300031897\|Ga0318520_11014548	Not Available	524	Open in IMG/M
3300031908\|Ga0310900_10738618	Not Available	791	Open in IMG/M
3300031912\|Ga0306921_12512271	Not Available	534	Open in IMG/M
3300031941\|Ga0310912_10876635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	691	Open in IMG/M
3300031942\|Ga0310916_10611296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	926	Open in IMG/M
3300031943\|Ga0310885_10927488	Not Available	500	Open in IMG/M
3300032008\|Ga0318562_10204245	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1145	Open in IMG/M
3300032065\|Ga0318513_10214003	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	930	Open in IMG/M
3300032065\|Ga0318513_10323923	Not Available	749	Open in IMG/M
3300032066\|Ga0318514_10097753	All Organisms → cellular organisms → Bacteria → Proteobacteria	1485	Open in IMG/M
3300032075\|Ga0310890_11751020	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	516	Open in IMG/M
3300032090\|Ga0318518_10140651	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1222	Open in IMG/M
3300032205\|Ga0307472_102280497	Not Available	547	Open in IMG/M
3300032770\|Ga0335085_10197216	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium → Hyalangium minutum	2468	Open in IMG/M
3300032782\|Ga0335082_10067747	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3624	Open in IMG/M
3300032782\|Ga0335082_11368052	Not Available	577	Open in IMG/M
3300032783\|Ga0335079_10032049	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	6029	Open in IMG/M
3300032892\|Ga0335081_11867711	Not Available	647	Open in IMG/M
3300032893\|Ga0335069_10082784	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	4095	Open in IMG/M
3300033290\|Ga0318519_10154968	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1283	Open in IMG/M
3300033412\|Ga0310810_10000322	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	50593	Open in IMG/M
3300033412\|Ga0310810_10109557	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3281	Open in IMG/M
3300033475\|Ga0310811_10404979	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	1491	Open in IMG/M
3300033480\|Ga0316620_10141462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1912	Open in IMG/M
3300033486\|Ga0316624_11191662	Not Available	692	Open in IMG/M
3300033513\|Ga0316628_100966524	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.44%
Host-Associated	Host-Associated	24.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.68%
Plants	Host-Associated → Plants	24.56%
Aquatic	Environmental → Aquatic	1.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.77%
Freshwater	Environmental → Aquatic → Freshwater	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.53%
Loam	Environmental → Terrestrial → Soil → Loam	9.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.75%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.75%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.51%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.39%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.51%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	3.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.63%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.63%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.88%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.88%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300002155	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7	Host-Associated	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00770060	2088090014	Soil	GADAPAAPGDAGEAEAVTGLLAVLLLLSVDAGTPEAPDGGSGQPTAPARTAEDEEIIQNLDLLEHLAEGQALEMMLDLEAARTKTDR
MBSR1b_0723.00000840	2162886012	Miscanthus Rhizosphere	VTGLLALLVILSTDAGSFGTPDGGVRSTPPASRSAEDEEIIQNLDLLEHLAESQELEMMIELEARRGKQDR
F62_03695770	2170459010	Grass Soil	ADAAAAPRDAGEAGQVTGLLAVLVLLSTDAGFGTPDGGVQSPPPASRSAEDEEVIENLELLEHLAESQELEMMLELEAKRGKQDR
INPhiseqgaiiFebDRAFT_1016352582	3300000364	Soil	VTGLLAVLLLLSVDAGTPEAPDGGSGQPTAPARTAEDEEIIQNLDLLEHLAEGQALEMMLDLEAARTKTDR*
JGI1027J12803_1012174161	3300000955	Soil	VTGLLAVLLLLAADAGTPGSPDGGVDAPPGATARTAEDEEVIRNLDVLEHLAEGQALEMILDLEAERAKASR*
JGI24737J22298_101392011	3300001990	Corn Rhizosphere	LSTDAGSFGTPDGGVRSTPPASRSAEDEEIIQNLDLLEHLAESQELEMMIELEARRGKQDR*
JGI24033J26618_10764831	3300002155	Corn, Switchgrass And Miscanthus Rhizosphere	LVILSTDAGSFGTPDGGVRSTPPASRSAEDEEIIQNLDLLEHLAESQELEMMIELEARRGKQDR*
JGI25404J52841_100189261	3300003659	Tabebuia Heterophylla Rhizosphere	AILVLLSTDAGRLETPDGGVTGPPPASRSAEDEEVIQNLDLLEHLADGQALEMMLELEAERRQAER*
Ga0062593_1007183993	3300004114	Soil	VTGLLALLVLLSTDAGNFAIPDGGVRSPPPASRSAEDEEIIQNLDLLEHLAESQELEMMLELEARRGKQDR*
Ga0062594_1000055912	3300005093	Soil	VTGLLALLVILSTDAGSFGTPDGGVRSTPPASRSAEDEEIIQNLDLLEHLAESQELEMMIELEARRGKQDR*
Ga0070683_1006113312	3300005329	Corn Rhizosphere	VTGLLAILVLLSTDAGRPETPDGGVPAPPPASRSTEDQEVIQNLELLEHLAEGQALEMMLELERGQAER*
Ga0066388_1000515696	3300005332	Tropical Forest Soil	VTGLLAILVLLFTDAGTLGTPDGGVSGPPPASRSAEDEEIIQNLDVLEHLAESQELEMMLELEGRRGKSDR*
Ga0066388_1003471892	3300005332	Tropical Forest Soil	VTGLLAVLLLLSTDPGYAGMADGGVADFTVPRSAEDEEVIQNLELLEHLAEGQALEMMLELEEERVKTDR*
Ga0070682_1015565641	3300005337	Corn Rhizosphere	ALLVILSTDAGSFGTPDGGVRSTPPASRSAEDEEIIQNLDLLEHLAESQELEMMIELEARRGKQDR*
Ga0068868_1013490641	3300005338	Miscanthus Rhizosphere	VTGLLAVLVLLSTDAGSFGTPDGGVRSPPPASRSAEDEEVIENLELLEHLAESQELEMMLELEAKRGKQDR*
Ga0070694_1006023011	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VTGLLALLVILSTDAGSFGTPDGGVRSTPPASRSAEDEEIIQNLDLLEHLAESQELEMMLELEAKRGKQDR*
Ga0070678_1002917731	3300005456	Miscanthus Rhizosphere	APRDAGEAGQVTGLLALLVLLSSDAGSFGAPDGGVRSPPPASRSAEDEEIIQNLDLLEHLAESQELEMMLELEARRGKQDR*
Ga0068856_1005318271	3300005614	Corn Rhizosphere	VTGLLALLVLLSSDAGSFGPPDGGVRPTPPASRSAEDEEVIQNLDLLEHLAESQELEMMLELEAKRGKQDR*
Ga0066903_1028816302	3300005764	Tropical Forest Soil	VTVVLAVLLLLSTDAEQVEVADGGVSALSVPRSAEDEEVIQNLEVLEHLAEGQALEMMLELENERGKTDR*
Ga0066903_1082206932	3300005764	Tropical Forest Soil	VTGLLAILVLLSTDAGTQQSPDGGVQAPPPASRSAEDEEIIANLDVLEHLGDSQALEMILDLEAERAKANTDR*
Ga0068863_1009311382	3300005841	Switchgrass Rhizosphere	VTGLLALLVLLSSDAGSFGTPDGGVRSPASRSAEDEEIIENLDLLEHLAESQELEMMLELEAKRGKQDR*
Ga0081540_100012271	3300005983	Tabebuia Heterophylla Rhizosphere	VTGLLAILVLLSTDAGRLETPDGGVTGPPPASRSAEDEEVIQNLDLLEHLADGQALEMMLELEAERRQAER*
Ga0081540_100034444	3300005983	Tabebuia Heterophylla Rhizosphere	VTGLLAILVLLATDAGTLGTPDGGVRGPPPASRSAEDEEIIQNLDLLEHLAESQELEMMLELEARRGQTDR*
Ga0081540_10091795	3300005983	Tabebuia Heterophylla Rhizosphere	VTGLLAILVLLSTDAGTTQQSPDGGVQAPPPASRSAEDEEIIANLDVLEHLGESQALEMILDLEAERAKANTDR*
Ga0070715_105532141	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	RDAGEAGAVTGLLAILVLLSTDAGTTQRTPDGGVQAPPPASRSAEDEEIIANLDVLEHLGESQALEMILDLEAERAKGNAER*
Ga0070716_1013118082	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PRDAGEAGQVTGLLALLVILSTDAGSFGTPDGGVRSTPPASRSAEDEEIIQNLDLLEHLAESQELEMMIELEARRGKQDR*
Ga0079222_115312951	3300006755	Agricultural Soil	VTGLLALLVLLSSDAGSFAPPDGGVRPTPPASRSAEDEEVIQNLDLLEHLAESQELEMMLELEAKRGKQDR*
Ga0079220_103901182	3300006806	Agricultural Soil	VTGLLAILVLLSTDASTHQVPDAGVQAPPPASRSAEDEEVIANLDVLEHLGEGQALEMILDLEAERAKANAER*
Ga0075425_1006548691	3300006854	Populus Rhizosphere	ARKVTGLLAILVLLSTDAGTHQVPDAGVQAPPPASRSAEDEEVIANLDVLEHLGEGQALEMILDLEAERAKANAER*
Ga0075426_106636021	3300006903	Populus Rhizosphere	VTGLLAILVLLSTDAGTHQVPDAGVQAPPPASRSAEDEEVIANLDVLEHLGEGQALEMILDLE
Ga0075424_1003118561	3300006904	Populus Rhizosphere	GEARKVTGLLAILVLLSTDAGTHQVPDAGVQAPPPASRSAEDEEVIANLDVLEHLGEGQALEMILDLEAERAKANAER*
Ga0075435_1012578622	3300007076	Populus Rhizosphere	VTGLLAILVLLSTDAGPPQAPDGGVQAPPPASRSAEDEEIIANLDVLEHLGDSQALEMILDLEAERAK
Ga0075423_126150931	3300009162	Populus Rhizosphere	PRDAGEAGQVTGLLALLVLLSTDAGSFGTPDGGVRSAPPASRSAEDEEIIQNLDLLEHLAESQELEMMLELEARRGTQDR*
Ga0105104_1000004732	3300009168	Freshwater Sediment	VTGLLAILVLLSTDAGRLEPPDGGVPAPRASRSAEDEEVIQNLDLLEHLAEGQALELMLELEAQRAKAER*
Ga0126380_107971532	3300010043	Tropical Forest Soil	VTGLLAILVLLATDAGTLGTPDGGVRGPPPAARSAEDEEIIQNLDLLEHLAESQELEMMLELEAQRGKTNR*
Ga0126384_108240902	3300010046	Tropical Forest Soil	VTGLLAILVLLATDAGTLGTPDGGVSQPPAASRSAEDEEIIQNLDVLEHLAESEELEMMLELEGKRGNPDR*
Ga0126384_112063852	3300010046	Tropical Forest Soil	VTGLLAVLLLLSTDPGYAGMADGGVSDFNVARSAEDEEVIQNLELLEHLAEGQALEMMLELEEERAKADR*
Ga0126373_119168632	3300010048	Tropical Forest Soil	VTGLLAILVLLATDAGTLGSPDGGENQPPPASRSAEDEEVIQNLDVLEHLAESQELEMMLELETKRGNADH*
Ga0126370_124822951	3300010358	Tropical Forest Soil	VTGLLAILVLLATDAGTLGTPDGGVSQPPAASRSAEDEEIIQNLDVLEHLAESQELEMMLELEGRRGKSDR*
Ga0126378_107692042	3300010361	Tropical Forest Soil	VTGLLAILVLLATDAGTLGTPDGGVSQPPAASRSAEDEEIIQNLDVLEHLAESQELEMMLELEGKRGTPDR*
Ga0126378_114872892	3300010361	Tropical Forest Soil	VTVVLAVLLLLSTDAEQVEVADGGVSALSVPRSAEDEEVIQNLEVLEHLAEGQALEMMLDLEDERGKTDR*
Ga0126379_125415982	3300010366	Tropical Forest Soil	VTGLLAILVLLATDAGTLGTPDGGVSQPPPASRSAEDEEIIQNLDVLEHLAESQELEMMLELEGRRGNPDR*
Ga0126381_1003382242	3300010376	Tropical Forest Soil	ASRDAGEAGQVTGLLAILVLLATDPASLGTTDGGVSESPSTARSAEDEEIIENLDLLEHLGESQELEMMLELEAQRGKPDR*
Ga0126381_1004026182	3300010376	Tropical Forest Soil	VTGLLAILVLLATDPATLEAQDAGVRGPSSASRSAEDEEIIENLDLLEHLDESQELEMMLELEAHRGKQDR*
Ga0126381_1008939002	3300010376	Tropical Forest Soil	VTGLLAILVLLATDPATLGAQDGGVRGPPPASRSAEDEEVIENLDLLEHLNESQELEMMLELEAHRGKPDH*
Ga0134126_128030971	3300010396	Terrestrial Soil	VTGLLALLVILSTDAGSFGTPDGGVRSTPPASRSAEDEEVIENLELLEHLAESQELEMMIELEARRGKQDR*
Ga0126369_123797172	3300012971	Tropical Forest Soil	VTGLLAILVLLSTDAGTTQQSPDGGVQAPPPASRSTEDEEIIANLDVLEHLGDSQALEMILDLEAERAKANTDR*
Ga0157373_104455932	3300013100	Corn Rhizosphere	VTGLLALLVLLSSDAGSFGAPDGGVRSPPPASRSAEDEEIIQNLDLLEHLAESQELEMMLELEARRGKQDR*
Ga0182008_100650502	3300014497	Rhizosphere	DAGEAGQVTGLLALLVILSTDAGNFATPDGGVRSPPPASRSAEDEEIIQNLDLLEHLAESQELEMMLELEARKGKQDR*
Ga0182007_102703882	3300015262	Rhizosphere	VTGLLALLVILSTDAGNFATPDGGVRSPPPASRSAEDEEIIQNLDLLEHLAESQELEMMLELEARKGKQDR*
Ga0132258_105954346	3300015371	Arabidopsis Rhizosphere	VTGLLAILVLLATDAGTLGPPDGGVSGPPPASRSAEDDEIIQNLDVLEHLAQSQELEMMLELEAQRGKTDR*
Ga0132258_125240732	3300015371	Arabidopsis Rhizosphere	PRDAGEAGKVTGLLAILVLLATDAGTLEPPDGGVSGPPPASRSAEDEEIIQNLDVLEHLAQSQELEMMLELEAQRGKTDR*
Ga0132256_1015985071	3300015372	Arabidopsis Rhizosphere	EAGQVTGLLAILVLLSTDAGRPETPDGGVPAPPPASRSTEDQEVIQNLELLEHLAEGQALEMMLELERAQAER*
Ga0132257_1001196382	3300015373	Arabidopsis Rhizosphere	VTGLLAILVLLATDAGTLEPPDGGVSGPPPASRSAEDDEIIQNLDVLEHLAQSQELEMMLELEAQRGKTDR*
Ga0132257_1008173743	3300015373	Arabidopsis Rhizosphere	VTGLLAILVLLSTDAGRPETPDGGVPAPPPASRSTEDQEVIQNLDLLEHLAEGQALEMMLELERGQAER*
Ga0132255_1001977111	3300015374	Arabidopsis Rhizosphere	VTGLLAILVLLATDAGTLGPPDGGVSGPPPASRSAEDEEIIQNLDVLEHLAQSQELEMMLELEAQRGKTER*
Ga0187785_101099071	3300017947	Tropical Peatland	VTGLLAILVLLSTDAGTQQKDADAGVQAPPPASRSAEDEEVIANLDVLEHLGDSQALEMILDLE
Ga0187779_102625572	3300017959	Tropical Peatland	VTGLLLVLLLVADAGSPGAPDGGVRAPPSARSAEDEEVIRNLELLEHLAESQNLELLLELEAARSRPDSPAAPPR
Ga0187776_101541552	3300017966	Tropical Peatland	VTGLVLVLLLVADAGSPGAPDGGVRAPPSARSAEDEEVIRNLELLEHLTESQNLELLLELEAARAHPDSPAAPPP
Ga0182009_100048191	3300021445	Soil	VTGLLALLVILSTDAGNFATPDGGVRSPPPASRSAEDEEIIQNLDLLEHLAESQELEMMLELEARRGKQDR
Ga0182009_106396711	3300021445	Soil	VTGLLAILVLLSTDAGTHQVPDAGVPAPPPASRSAEDEEVIANLDVLEHLGEGQALEMILDLEAERAKANAER
Ga0207653_101782141	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	LLVILSTDAGSFGTPDGGVRSTPPASRSAEDEEIIQNLDLLEHLAESQELEMMIELEARRGKQDR
Ga0207707_102130731	3300025912	Corn Rhizosphere	AAAAPRDAGEAGQVTGLLALLVILSTDAGSFGTPDGGVRSTPPASRSAEDEEIIQNLDLLEHLAESQELEMMIELEARRGKQDR
Ga0207649_100064216	3300025920	Corn Rhizosphere	VTGLLAILVLLSTDAGRPETPDGGVPAPPPASRSTEDQEVIQNLELLEHLAEGQALEMMLELERGQAER
Ga0207641_102976872	3300026088	Switchgrass Rhizosphere	VTGLLALLVLLSSDAGSFGTPDGGVRSPASRSAEDEEIIENLDLLEHLAESQELEMMLELEAKRGKQDR
Ga0207683_102355922	3300026121	Miscanthus Rhizosphere	DAAEAPRDAGEAGQVTGLLALLVLLSSDAGSFGAPDGGVRSPPPASRSAEDEEIIQNLDLLEHLAESQELEMMLELEARRGKQDR
Ga0209593_100137731	3300027743	Freshwater Sediment	VTGLLAILVLLSTDAGRLEPPDGGVPAPRASRSAEDEEVIQNLDLLEHLAEGQALELMLELEAQRAKAER
Ga0209073_104782452	3300027765	Agricultural Soil	VTGLLAILVLLSTDASTHQVPDAGVQAPPPASRSAEDEEVIANLDVLEHLGEGQALEMILDLEAERAKANAER
Ga0318516_103769072	3300031543	Soil	VTGLLAILVLLTSDAGTLETPDGGARGPPAASRSAEDEEVIQNLDVLEHLAESQELEMMLELEARRGTQDR
Ga0318516_105502341	3300031543	Soil	AGDDAAAPSRDAGEAGQVTGLLAILVLLSTDAGTFGNPDGGVSGPPPASRSAEDEEVIQNLDVLEHLAESQELEMMLELEAHRGKPDH
Ga0318534_101095032	3300031544	Soil	VTGLLAILVLLSTDAGTFGNPDGGVSGPPPASRSAEDEEVIQNLDVLEHLAESQELEMMLELEAHRGKPDH
Ga0318571_102774212	3300031549	Soil	AILVLLTSDAGTLETPDGGARGPPAASRSAEDEEVIQNLDVLEHLAESQELEMMLELEARRGTQDH
Ga0318515_100094954	3300031572	Soil	AGQVTGLLAILVLLTSDAGTLETPDGGARGPPAASRSAEDEEVIQNLDVLEHLAESQELEMMLELEARRGTQDH
Ga0318515_106395581	3300031572	Soil	VTGLLAILVLLSTDAGTQQQAPQVRDAGVQTPPEASRSAEDEEVIANLDVLEHLGDSQALEMILDLEAERAKATTER
Ga0318515_106785202	3300031572	Soil	AGADAAAAPRDAGEAGQVTGLLAILVLLTTDAGTLETPDGGARGPPAASRSAEDEEVIQNLDVLEHLAESQELEMMLELEARRGTQDR
Ga0318542_102346242	3300031668	Soil	VTGLLAILVLLTTDAGTLETPDGGVRGPPAASRSAEDEEVIQNLDVLEHLAESQELEMMLELEARRGTQDH
Ga0318574_100813283	3300031680	Soil	VTGLLAILVLLTSDAGTLETPDGGARGPPAASRSAEDEEVIQNLDVLEHLAESQELEMMLELEARRGTQDH
Ga0318496_100992101	3300031713	Soil	GQVTGLLAILVLLSTDAGTFGNPDGGVSGPPPASRSAEDEEVIQNLDVLEHLAESQELEMMLELEAHRGKPDH
Ga0310813_101430752	3300031716	Soil	VTGLLAILVLLSTDAGRPETPDGGVPAPPPASRSTEDQEVIQNLDLLEHLAEGQALEMMLELERAQAER
Ga0307469_105377691	3300031720	Hardwood Forest Soil	VTGLLALLVILSTDAGSFGTPDGGVRSTPPGSRSAEDEEIIQNLDLLEHLAESQELEMMIELEARRGKQDR
Ga0318493_101914593	3300031723	Soil	VTGLLAILVLLATDAGTLGTPDGGVSQPPAASRSAEDEEIIQNLDVLEHLAESQELEMMLELEGRRGNPDR
Ga0318554_101588782	3300031765	Soil	VTGLLAILVLLTTDAGTLETPDGGVRGPPAASRSAEDEEVIQNLDVLEHLAESQELEMMLELEARRGTQDR
Ga0318509_102994992	3300031768	Soil	VTGLLAILVLLTSDAGTLETPDGGVRGPPAASRSAEDEEVIQNLDVLEHLAESQELEMMLELEARRGTQDR
Ga0318550_101585561	3300031797	Soil	VTGLLAILVLLTSDAGTLETPDGGARGPPAASRSAEDEEVIQNLDVLEHLAESQELEMMLELEARRGT
Ga0318497_100940143	3300031805	Soil	VTGLLAILVLLTSDAGTLETPDGGVRGPPAASRSAEDEEVIQNLDVLEHLAESQELEMMLELEARRGTQDH
Ga0318567_102245402	3300031821	Soil	GQVTGLLAILVLLTTDAGTLETPDGGVRGPPAASRSAEDEEVIQNLDVLEHLAESQELEMMLELEARRGTQDH
Ga0306925_105903572	3300031890	Soil	DAGEAGQVTGLLAILVLLTTDAGTLETPDGGVRGPPAASRSAEDEEVIQNLDVLEHLAESQELEMMLELEARRGTQDH
Ga0318536_106945591	3300031893	Soil	VLLTTDAGTLETPDGGVRGPPAASRSAEDEEVIQNLDVLEHLAESQELEMMLELEARRGTQDR
Ga0318520_110145481	3300031897	Soil	RDAGEAGQVTGLLAILVLLTSDAGTLETPDGGARGPPAASRSAEDEEVIQNLDVLEHLAESQELEMMLELEARRGTQDH
Ga0310900_107386182	3300031908	Soil	VTGLLAILVLLATDAGTLGPPDGGTSGPPPASRSAEDEEIIQNLDVLEHLAQSQELEMMLELEAQRGKTDR
Ga0306921_125122712	3300031912	Soil	LATDAGTLGTPDGGVSQPPAASRSAEDEEIIQNLDVLEHLAESQELEMMLELEGRRGNPD
Ga0310912_108766352	3300031941	Soil	VTGLLAILVLLSTDAGTFGNPDGGVSGPPPASRSAEDEEVIQNLDVLEHLAESQELEMMLELEA
Ga0310916_106112962	3300031942	Soil	RDAGEAGQVTGLLAILVLLTSDAGTLETPDGGARGPPAASRSAEDEEVIQNLDVLEHLAESQELEMMLELEGRRGNPDR
Ga0310885_109274882	3300031943	Soil	VTGLLAILVLLATDAGTLGPPDGGVSGPPPASRSAEDEEIIRNLDVLEHLAQSQELEMMLELEAQRGKTDR
Ga0318562_102042453	3300032008	Soil	VTGLLAILVLLSTDAGTFGNPDGGVSGPPPASRSAEDEEVIQNLDVLEHLAESQELEMMLELEGRRGNPDR
Ga0318513_102140031	3300032065	Soil	VTGLLAILVLLSTDAGTQQQAPQVRDAGVQTPPEASRSAEDEEVIANLDVLEHLGDSQALEMILDLEAERAKASTER
Ga0318513_103239231	3300032065	Soil	HLEVDDPRAAGDDAAAPSRDAGEAGQVTGLLAILVLLSTDAGTFGNPDGGVSGPPPASRSAEDEEVIQNLDVLEHLAESQELEMMLELEAHRGKPDH
Ga0318514_100977533	3300032066	Soil	VLLATDAGTLGTPDGGVSQPPAASRSAEDEEIIQNLDVLEHLAESQELEMMLELEGRRGNPDR
Ga0310890_117510201	3300032075	Soil	VTGLLAILVLLSTDAGRPETPDGGVPAPPPASRSTEDQEVIQNLDLLEHLAEGQALEMMLELERAQAE
Ga0318518_101406511	3300032090	Soil	DAGEAGQVTGLLAILVLLSTDAGTFGNPDGGVSGPPPASRSAEDEEVIQNLDVLEHLAESQELEMMLELEAHRGKPDH
Ga0307472_1022804971	3300032205	Hardwood Forest Soil	VTGLLALLVILSTDAGSFATPDGGVRSPPPASRSAEDEEIIQNLDLLEHLAESQELEMMLELEAQRGKTDR
Ga0335085_101972165	3300032770	Soil	VTGLLALLVLLSSDAGSFGTPDGGVRSPPPASRSAEDEEIIQNLDLLEHLAESQELEMMLELEARRGNQDR
Ga0335082_100677472	3300032782	Soil	VTGLLAVLLLLSLDAGAHPPTPDGGVALPPPARSAEDEEVIQQLDVLEHLADGQALEMMLELEAARARPDR
Ga0335082_113680522	3300032782	Soil	VTGLLAILLLLSVDAGTPGTPDGGVCAPPARSRSAEDQEIIENLDVLEHLAESRELEMILELEAVRSTPDH
Ga0335079_100320493	3300032783	Soil	VTGLLLVLLLVADAGSPGAPDAGVRAPPSARSAEDEEVIRNLELLEHLAESQNLELLLELEASRARPDSPAAPPP
Ga0335081_118677111	3300032892	Soil	VTGLLLVLLLVADAGSPGAPDAGVRAPPSARSAEDEEVIRNLELLEHLAESQNLELLLELEAARARPDSPAAPPP
Ga0335069_100827847	3300032893	Soil	VTGLLLVLLLVADAGSPGAPDGGVRAPPSARSAEDEEVIRNLELLEHLAESQNLELLLELEASRARPDSPAAPPP
Ga0318519_101549683	3300033290	Soil	VTGLLAILVLLSTDAGTFGNPDGGVSGPPPASRSAEDEEVIQNLDVLEHLAESQELEMMLELEAHRGQADR
Ga0310810_1000032234	3300033412	Soil	VTGLLALLVILSTDAGNFATPDGGVRSPPPASRSAEDEEIIQNLDLLEHLAESQELEMMLELEARKGKQDR
Ga0310810_101095573	3300033412	Soil	VTGLLAILVLLSTDAGRLETPDGGVRAPPPASRSAEDEEVIQNLDLLEHLAEGQALEMMLELERAQAER
Ga0310811_104049792	3300033475	Soil	EAGQVTGLLALLVILSTDAGNFATPDGGVRSPPPASRSAEDEEIIQNLDLLEHLAESQELEMMLELEARKGKQDR
Ga0316620_101414621	3300033480	Soil	VTGLLAVLLLLSVDAGTPGAPDGGVPAPPAARSAEDEEVIRNLDVLEHLAEGQALEMLLE
Ga0316624_111916621	3300033486	Soil	VTGLLAVLLLLSVDAGTPGAPDGGVPAPPAARSAEDEEVIRNLDVLEHLAEGQALEMLLELEAERARPAR
Ga0316628_1009665242	3300033513	Soil	DAGEAESVTGLLAVLLLVSVDAGTPGAPDGGVPAPPAARSAEDEEVIRNLDVLEHLAEGQALEMLLELEAERARPAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081801

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences