Metagenome / Metatranscriptome Family F081791

Overview

Basic Information

• Family ID: F081791
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 114
• Average Sequence Length: 47 residues
• Representative Sequence: MAYYKVRIEVWCDWNPAESDLEDIAQSMGVGEAICTKREVVAVVDRP
• Number of Associated Samples: 91
• Number of Associated Scaffolds: 114

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 94.74 %
• % of genes near scaffold ends (potentially truncated): 13.16 %
• % of genes from short scaffolds (< 2000 bps): 12.28 %
• Associated GOLD sequencing projects: 84
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (83.333 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.825 % of family members)
• Environment Ontology (ENVO): Unclassified (38.596 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (48.246 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 16.00%
  β-sheet: 28.00%
  Coil/Unstructured: 56.00%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00903	Glyoxalase	13.16
PF04008	Adenosine_kin	5.26
PF12838	Fer4_7	4.39
PF00069	Pkinase	3.51
PF00067	p450	2.63
PF00072	Response_reg	1.75
PF07238	PilZ	1.75
PF13502	AsmA_2	0.88
PF13520	AA_permease_2	0.88
PF12681	Glyoxalase_2	0.88
PF14534	DUF4440	0.88
PF07676	PD40	0.88
PF01061	ABC2_membrane	0.88
PF00355	Rieske	0.88
PF00656	Peptidase_C14	0.88
PF00872	Transposase_mut	0.88
PF08308	PEGA	0.88
PF11154	DUF2934	0.88
PF13376	OmdA	0.88
PF13519	VWA_2	0.88
PF00582	Usp	0.88
PF03743	TrbI	0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	14.04
COG1839	Adenosine/AMP kinase	Nucleotide transport and metabolism [F]	5.26
COG2124	Cytochrome P450	Defense mechanisms [V]	2.63
COG2948	Type IV secretory pathway, VirB10 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.88
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.88
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.88

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.33 %
All Organisms	root	All Organisms	16.67 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.33 %
cellular organisms	root	All Organisms → cellular organisms	16.67 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	16.67 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.33 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	16.67 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.79 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.79 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300005436|Ga0070713_100568490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075
3300005467|Ga0070706_100077016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3086
3300005617|Ga0068859_102789350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536
3300006052|Ga0075029_100347832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955
3300012929|Ga0137404_11203935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697
3300019881|Ga0193707_1005724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4337
3300020583|Ga0210401_10238297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1678
3300026089|Ga0207648_10030212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4801
3300026325|Ga0209152_10374355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551
3300026327|Ga0209266_1011954	All Organisms → cellular organisms → Bacteria → Acidobacteria	5013
3300026327|Ga0209266_1150695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941
3300026548|Ga0209161_10227782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999
3300027846|Ga0209180_10232692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061
3300027862|Ga0209701_10446670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712
3300027875|Ga0209283_10719864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622
3300027911|Ga0209698_11359231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518
3300027915|Ga0209069_10685292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600
3300031716|Ga0310813_10016190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4978
3300032180|Ga0307471_103540076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.11%
Host-Associated	Host-Associated	7.89%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.72%
Plants	Host-Associated → Plants	7.89%
Aquatic	Environmental → Aquatic	4.39%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.39%
Sediment	Environmental → Aquatic → Sediment	3.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.51%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.88%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.18%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.51%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.75%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.88%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.63%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.75%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.88%

Habitat

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.39%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.75%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.88%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.88%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental
3300012212	Combined assembly of Hopland grassland soil	Host-Associated
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25386J43895_101857862	3300002912	Grasslands Soil	MAYYKVRIEVWCDWNPGESDLEEIVQNTSTGEAICTKQEVIAVVDRPQDIDDDE
Ga0066673_100071946	3300005175	Soil	MAYYKVRIEVWCDWNPAESDVEEIGETINAGEAFCTMREVVAIVDRPQELTTKKP*
Ga0066673_100897461	3300005175	Soil	MAYYKVRIEVWCDWNPGESDLEEIVQNTSTGEAICTKQEV
Ga0066671_102115742	3300005184	Soil	GGPMAYYKVRIEVWCDWNPAESDVEEIGETINAGEAFCTMREVVAIVDRPQELTTKKP*
Ga0070713_1005684901	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAYYKVRIEVWCDWNPAESDLDEIAQGMGVGEALCTKREIVAIADRTQDII*
Ga0070708_1000054174	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAYYKVRIEVWCDWNPAEGDLEEIAQGMGVGEAICTMREVVAVVNRPRY*
Ga0070706_1000770166	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VRLAYYKVRIEVWCDWNPAESDLEDIAQSMGVGETICTMREVVAVVNRPQDIEDEDEQQLATGRRL*
Ga0070697_1012039341	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAYYKVRIEVWCDWNPADSDLEDIAQSMGVGEAICTQREVIAVVDR
Ga0066670_108243011	3300005560	Soil	MAYYKVRIEVWCDWNPAESDVEEIGETINAGEASCTMREVVAIVDRPQELTTKKP*
Ga0066708_107044281	3300005576	Soil	MAYYKVRIEVWCDWNPAESDLDDIAQAIGVGEAPCTKREVVAVVDRPKDIED
Ga0066708_108309282	3300005576	Soil	MAYYKVRIEVWCDWNPGESDLEEIVQNTSTGEAICTKQEVIAV
Ga0068859_1027893502	3300005617	Switchgrass Rhizosphere	MAYYKVRIEVWCDWNPAESDLDDIAQSLGVGEAVCTKREVVAVVDRPGDIDDEEAM
Ga0066789_100518731	3300005994	Soil	MAYYKVRIEVWCDWNPVESDLEEIAQGMGVGEAICTMREVVAVVNRPQEIED
Ga0070717_101159551	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LAYYKVRIEVWCDWNPAESDLEDIAQSMGVGETICTMREVVAVVNRPQDIEDEDEQQLATGRRL*
Ga0075029_1003478322	3300006052	Watersheds	MAYYKVRIEVWCDWNPAESDLDDIVQSMGVGEAICTMRGGCSPARY*
Ga0075026_1007989912	3300006057	Watersheds	MAYYKVRIEVWCDWNPAESDLDDIVQSMGVAEAICTMREIVAVV
Ga0070715_109229651	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MAYYKVRIEVWCDWNPADSDLEDIAQSIGVGEAICTQREVIAVVDR
Ga0066660_106866341	3300006800	Soil	MAYYKVRIEVWCDWNPAESDLEEIVQNTSTGEAICTKQEVVAVVDCPQDIDDDEAM
Ga0073928_102748511	3300006893	Iron-Sulfur Acid Spring	MAYFKVRIEIWCDWKPAESDLEEIAQSMGVGEAICTRRVVAVADRLQEDEEA
Ga0066710_1005711653	3300009012	Grasslands Soil	MAYYKVRIEVRCDWNPAESDVEEIGETINAGEAFCTMREVVAIVDRPQELTTKKP
Ga0066710_1027450291	3300009012	Grasslands Soil	MAYYKVRIEVWCDWNPSESDLEEIAQNTSTGEAICTKQEVVAVVDRPQDIDD
Ga0099829_105076941	3300009038	Vadose Zone Soil	MNSPEGGAMAYYKVRIEVWCAWNPAESDLDDIVQSMGAGEAICTMREVIAVVNRPHDIED
Ga0099829_105124553	3300009038	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLEEIVQNTSTGEAICTKQEVVAVVDRPQDID
Ga0099830_110916001	3300009088	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLEDIAQSMGVGEAICT
Ga0099828_109488112	3300009089	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLDDIAQSMGVGEAICT
Ga0066709_1014805121	3300009137	Grasslands Soil	MAYYKVRIEVWCDWNPSESDLEEIAQNTSTGEAICTKQEVVAVVDRPQDIDDDEA
Ga0105238_103560524	3300009551	Corn Rhizosphere	MTYFKVRLEIWCDGNPAESDLEETARHILAGEAICTSREVV
Ga0126374_108027461	3300009792	Tropical Forest Soil	MMAYYKVRIEVWCDWDPKESNLEEISENVRAGEAICINVV
Ga0134125_118923012	3300010371	Terrestrial Soil	MAYYKVRIEVWCDWNPADSDLEDIAQSMGVGEAICTQREVIAVVDRPQNI
Ga0126383_109286182	3300010398	Tropical Forest Soil	MAYYKVRIEVWCDWDPAASELEEIVENLRTGDAICTKRQVVD
Ga0137389_102704981	3300012096	Vadose Zone Soil	AMAYYKVRIDGWCDWNPAESDLDETAQSMGVGEAICTRREVVAVVNRPQDIEDEEA*
Ga0137389_104203203	3300012096	Vadose Zone Soil	MAYYKVRIEVWCDWNPSESDLEDIAQSMGVGEAMGTMREIVGVGNRPPYIEDEE
Ga0137389_111677882	3300012096	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLEDIAQSMGVGEAICTMREVVAGVNRPQD
Ga0137389_116289611	3300012096	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLEEIAQGMGVGEAICT
Ga0137388_106893672	3300012189	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLEDIAQAMGVGEAICTKRDVIAVVDRAQDI
Ga0137388_107647632	3300012189	Vadose Zone Soil	MAYYKVRIEVWGDWNPAESDLEDIAQSMGVGEAICTMREVVAVVNRP*
Ga0137388_108585032	3300012189	Vadose Zone Soil	MNSPEGGAMAYYKVRIEVWCDWNPAESDLDDIVQSMGAGEAICTMR
Ga0137388_119102871	3300012189	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLDEIAQSMGVGEAICTRREVVAVVNRPQDIEDEEA*
Ga0137383_100536892	3300012199	Vadose Zone Soil	MAYYKVRIEVWCDWDPVASELEEIVENIRTGDAILYQAPSG*
Ga0137363_100719603	3300012202	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLEDIAQSMGVGEAICTMREVVAVVNRP*
Ga0137362_116463481	3300012205	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLDDIVQSMGVGEAICTMREVVAVVNR
Ga0137378_104513222	3300012210	Vadose Zone Soil	MGYYKVRIEVWCDWNPAESDLEDITQSMGVGEALCTKREVVSSRSTDT*
Ga0137378_104818463	3300012210	Vadose Zone Soil	MAYYKVRIEVWCDWDPAESDLEEIAENISAGEAICTKREILNVVNRPQD
Ga0137377_104993733	3300012211	Vadose Zone Soil	MAYHKVRIEVWCDWNPAESDLEEIAENISAGDAICTRREVVAVVDRPQDI
Ga0137377_108009981	3300012211	Vadose Zone Soil	KVRIEVWCDWNPAESDLEEIVQNTSTGEAICTKQEVVAVVDRPQELVTDRKNS*
Ga0150985_1122307431	3300012212	Avena Fatua Rhizosphere	MAYYKVRIEVWCDWNPAESDLEEIAESMSAGGSICTSTS*
Ga0137386_106715191	3300012351	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLEEIIQNTSTGEAICTKHEVVAIVDRPQDIDDDEA
Ga0137384_114301741	3300012357	Vadose Zone Soil	MAYYKLRIEVWCDWNPGESDLEEIAQNISAQEAICTKREV
Ga0137385_116546872	3300012359	Vadose Zone Soil	MAYHKVRIEVWCDWNPAESDLEDIAQSMGVGEAICTMREIVAVVDRPQDIEDEKP*
Ga0137360_111430731	3300012361	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLEDSAQSMGVGETICTMREVVAVVNRPQDIEDEE
Ga0137361_102247411	3300012362	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLDDIAQSMGVGEAICTM
Ga0137397_106592621	3300012685	Vadose Zone Soil	MAYYKVRIEVWCDWNPADSDLDDIAQAMGVGEAICTKREVVAVVGRPQ
Ga0137416_105037914	3300012927	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLDDIAESMSVGEAICTKREVVSVV
Ga0137404_112039352	3300012929	Vadose Zone Soil	MAYYKVRIEVWCDWNLAESDLEEIVQNTSTGEAICTQQEVVAVVDCP
Ga0137404_115544892	3300012929	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLEDIAQSMGVGEAICTKREVVAVVDRP
Ga0164306_107958662	3300012988	Soil	MAYYKVRIEVWCDWNPAESDLDDIAQSMGVGEAICTRREVV
Ga0120125_10173441	3300014056	Permafrost	MAYYKVRIEVWCDWNPAESDLEEIAESMSAGEAIC
Ga0157376_123213661	3300014969	Miscanthus Rhizosphere	MLGGGMAYYKVQIEVWCDWNPAESDLDDIAQAMGVGEAICTMREVVAVVD
Ga0137414_12316866	3300015051	Vadose Zone Soil	MPYYKVRIEVWCDWNPAESDLDDITQAMGVGEAICTMREVVAVVNRPQDIEDEEP*
Ga0137412_107173042	3300015242	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLDDIAQAMGVGEAICTMRDIVAVVDR
Ga0132258_107923241	3300015371	Arabidopsis Rhizosphere	MAYYKVRIEVWCDWDPAESELDDIAQAMGVGEAICTMRDVITVVDRPQD
Ga0182034_1000179011	3300016371	Soil	MAYYKVRIEVWCDWDPKESNLEEISENVRAGEAICTNVEVVAEVDR
Ga0066669_101126402	3300018482	Grasslands Soil	MAYYKVRIEVWCDWNPAESDVEEIGETINAGEAFCTMREVVAIVDRPQELTTKKP
Ga0193707_10057244	3300019881	Soil	MAYYKVRIEVWCDWNPAKSDLEDIAQSMGVGEAICTMREVVTVVNRRKILKTKRP
Ga0193751_12262051	3300019888	Soil	MAYYKIQIEVWCDWNPAESDLEEIAESVSVGEAICTRREVVNVVNRPQDTA
Ga0210401_102382971	3300020583	Soil	MAYYKVRIEVWCDWNPAESDLEDIAQSMGVGEAICTMREV
Ga0210401_113732451	3300020583	Soil	MAYYKVRIEVWCDWNPAESDLEDIAQSMGVGEAICTMREVITVVNRPQDI
Ga0210405_101172491	3300021171	Soil	MAYYKVRIEVWCDWNPAESDLEDIAQSMGVGEAICTMREVVAEIG
Ga0210405_105706892	3300021171	Soil	MAYYKVRIEVWCDWNPAESDLDDIAQSMGVGEAICTKR
Ga0210394_118580971	3300021420	Soil	MPYYKVRIEVWCDWNPAESDLDEISQSMGVGEAICTMREVVA
Ga0210410_107291222	3300021479	Soil	MAYYKVRIEVWCDWNPAESDLEDIAQSMGVAEAICTTREVVAVVNRPQGIEDE
Ga0210410_115768771	3300021479	Soil	MAYYKVRIEVWCDWNPAESDLDDIAQAMGVGEAICTKREVV
Ga0210409_114288932	3300021559	Soil	MAYYKVRIEVWCDWNPAESDLDDIAQAMGVGEAICTKREIVAIA
Ga0207710_102643731	3300025900	Switchgrass Rhizosphere	MAYYKVRIEVWCDWNPADSDLEDIAQSIGVGEAICTQREVIAVVDRPQDIEDEE
Ga0207685_106465931	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MAYYKVRIEVWCDWNPADSDLEDIAQSIGVGEAICTQREVIAVVDRPQDIEDEEAMS
Ga0207684_101056554	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LAYYKVRIEVWCDWNPAESDLEDIAQSMGVGETICTMREVVAVVNRPQDIEDEDEQQLATGRRL
Ga0207684_102575632	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAYYKVRIEVWCDWDPVASELEEIVENIRTGDAICTKRQVV
Ga0207646_105001343	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAYYKVRIEVWCDWDPVVSELEEIVENVRTGDAICTMRQV
Ga0207646_106382403	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAFYKVRIEVWCDWNPAESDLEEIIQNTSTGEAICTKQEVIAVVDRPQDIDDDEA
Ga0207700_101634533	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAYYKVRIEVWCDWNPAESDLDDIAQAMGVGEALCTMREVVAVVNRPQDIEDE
Ga0207640_100377811	3300025981	Corn Rhizosphere	MAYYKVRIEVWCDWNPAESDLDDIAQSLGVGEAVCTKRE
Ga0207678_103248181	3300026067	Corn Rhizosphere	MTYFKVRLEIWCDGNPAESDLEETARHILAGEAICTSREVVAVVDRPQDIE
Ga0207648_100302121	3300026089	Miscanthus Rhizosphere	MTYFKVRLEIWCDGNPAESDLEETARHILAGEAICTSREVVAVVDRPQDIENDAAM
Ga0209761_13501992	3300026313	Grasslands Soil	MAYYKVRIEVWCDWDPAESDPKEIVGHVALGEGAICT
Ga0209152_103743552	3300026325	Soil	MAYYKVRIEVWCDWNPAESDLEEIVQNTSTGEAICTKQEV
Ga0209801_12365312	3300026326	Soil	MAYYKVRIEVWCDWNPAESDLEEIVQNTSTGEAICTKQEVVA
Ga0209266_101195410	3300026327	Soil	MAYYKVRIEIWCDWNPAESDLEEIVHNTSTGEAICTKQEVV
Ga0209266_10703505	3300026327	Soil	MAYYKVRIEVWCDWNPGESDLEEIVQNTSTGEAICTKQEVIAVVDRP
Ga0209266_11506951	3300026327	Soil	MAYYKVRIEVWCDWNPAESDLEEIVQNTSTGEAICTKQEVVAVVDCPQDI
Ga0257169_10775171	3300026469	Soil	MAYYKVRIEVWCDWNPAESDLEDIAQSMGVGEAICTMREVVAVVNRPQDIE
Ga0209806_11791982	3300026529	Soil	MAYYKVRIEVWCDWNPAESDLEEIVQNTSTGEAICTKQEVVAVVDRPQDIDDD
Ga0209161_102277822	3300026548	Soil	MAYYKIRIEVWCDWNPAESDLEEIVQNTSTGEAICTKQEVVAVVDCPQDI
Ga0209474_106333201	3300026550	Soil	MAYYKVRIEVWCDWNPAESDVEEIGETINAGEAFCTM
Ga0209734_10762232	3300027535	Forest Soil	MAYYKVRIEVWCNWNPAESDLEEIAQSMGVGEAICTMREVVAVVNRPQ
Ga0209219_10893961	3300027565	Forest Soil	MPYYKVRIEVWCDWNPAESDLDEIAQSMGVGEAICT
Ga0209217_11043602	3300027651	Forest Soil	MAYRKVLLEVWCDWNPAESGLDEIAESMRVGEAMEAKQCR
Ga0209009_10265784	3300027667	Forest Soil	MAYYKVRIEVWCDWNPAESDLEDIAQSMGVGEAICTMREVIAVVDRPQD
Ga0209180_102326923	3300027846	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLDDIVQSMGVGEAICTMREVVA
Ga0209701_104466703	3300027862	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLDDIVQSMGVGEAICTM
Ga0209283_105203991	3300027875	Vadose Zone Soil	MAYYKVRIEVWCDWNPAESDLDDIAQSMGVGEAICTK
Ga0209283_107198641	3300027875	Vadose Zone Soil	MAYYKVRIEVWCDWDPAESDPKEIVGHVALGEGAI
Ga0209698_113592312	3300027911	Watersheds	MAYYKVRIEVWCDWNPAESDLEDIAQSMGVGEAICTKREVVSVVNRPQDI
Ga0209069_106852923	3300027915	Watersheds	MAYYKVRIEVWCDWNPAESDLDDIAQSMGVGEAICTMRN
Ga0209526_101594423	3300028047	Forest Soil	MAYYKVRFEVWCDWNPAESDLDDIAQSMGAGEAICTKREVVAVVDRPQDIED
Ga0222749_102174021	3300029636	Soil	MAYYKVRIEVWCDWNPAESDLDDIAQSTGVGEAICTLRELVGVVNRPQDIEDE
Ga0170822_131207291	3300031122	Forest Soil	MAYYKVRIEVWCDWDPAESDLEEIASNISAGEAVCTKREI
Ga0310813_1001619011	3300031716	Soil	MAYYKVRIEVWCDWNPAESDLDDIAQSLGVGEAVC
Ga0307469_119296691	3300031720	Hardwood Forest Soil	MAYYKVQIEIWCDWNPAESDLEDIAQSMGVGEAICTMREVVAVIDRPQDIE
Ga0307469_120405211	3300031720	Hardwood Forest Soil	MAYYKVRIEVWCAWDPVASELEEIVENIRTGDAIC
Ga0307473_107949592	3300031820	Hardwood Forest Soil	MAYYKVRIEVWCDWNPADSDLEDLAQSMGVGEAICTKREVIAVADRPQDIEDEEAM
Ga0307473_111398492	3300031820	Hardwood Forest Soil	LLWPYYKVRIEVWCDWNPAESDLEEIAENIGARDAICTMQEGIAVV
Ga0306926_112854282	3300031954	Soil	MAYYRVRIEVWCDWDPAASDLNEIVEHINSGDAICTKRSD
Ga0307471_1035400762	3300032180	Hardwood Forest Soil	MAYYKVRIEVWCDWDPAESDLEDITQSMAVGEAICTKREVVAVVDRPQDIEDEEA
Ga0306920_1006469011	3300032261	Soil	MAYYKVRIEVWCDWDPKESNLEEISENVRAGEAICTN