Metagenome Family F081777

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081777
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	49 residues
Representative Sequence	MKDYKHKRLEASLEVRKQERLDKYLSLGLSALGALIGVFCIIFATHVALN
Number of Associated Samples	63
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	82.46 %
% of genes near scaffold ends (potentially truncated)	19.30 %
% of genes from short scaffolds (< 2000 bps)	72.81 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Predicted Viral (50.000 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (34.210 % of family members)
Environment Ontology (ENVO)	Unclassified (82.456 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (71.930 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 90.00% β-sheet: 0.00% Coil/Unstructured: 10.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF13155	Toprim_2	3.51
PF03237	Terminase_6N	2.63
PF00268	Ribonuc_red_sm	1.75
PF13662	Toprim_4	0.88
PF12236	Head-tail_con	0.88
PF08273	Prim_Zn_Ribbon	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0208	Ribonucleotide reductase beta subunit, ferritin-like domain	Nucleotide transport and metabolism [F]	1.75
COG4643	Uncharacterized domain associated with phage/plasmid primase	Mobilome: prophages, transposons [X]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.02 %
Unclassified	root	N/A	42.98 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	50.00 %
Unclassified	root	N/A	42.98 %
cellular organisms	root	All Organisms → cellular organisms	7.02 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	50.00 %
Unclassified	root	N/A	42.98 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.02 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	50.00 %
Unclassified	root	N/A	42.98 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	4.39 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	50.00 %
Unclassified	root	N/A	42.98 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	4.39 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.88 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	50.00 %
Unclassified	root	N/A	42.98 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4.39 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.88 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	50.00 %
Unclassified	root	N/A	42.98 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	0.88 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.88 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	50.00 %
Unclassified	root	N/A	42.98 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.88 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	50.00 %
Unclassified	root	N/A	42.98 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.88 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10117187	All Organisms → Viruses → Predicted Viral	1058	Open in IMG/M
3300000101\|DelMOSum2010_c10273111	Not Available	519	Open in IMG/M
3300000116\|DelMOSpr2010_c10020847	All Organisms → Viruses → Predicted Viral	3200	Open in IMG/M
3300000116\|DelMOSpr2010_c10232124	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	572	Open in IMG/M
3300000224\|SI34jun09_10mDRAFT_1014635	All Organisms → Viruses → Predicted Viral	1411	Open in IMG/M
3300001348\|JGI20154J14316_10033510	All Organisms → Viruses → Predicted Viral	2486	Open in IMG/M
3300001348\|JGI20154J14316_10075339	All Organisms → Viruses → Predicted Viral	1215	Open in IMG/M
3300001348\|JGI20154J14316_10179695	Not Available	538	Open in IMG/M
3300001351\|JGI20153J14318_10074182	All Organisms → Viruses → Predicted Viral	1065	Open in IMG/M
3300001450\|JGI24006J15134_10000237	Not Available	38274	Open in IMG/M
3300004448\|Ga0065861_1000124	All Organisms → Viruses → Predicted Viral	1890	Open in IMG/M
3300004457\|Ga0066224_1015372	All Organisms → Viruses → Predicted Viral	1174	Open in IMG/M
3300004460\|Ga0066222_1046614	Not Available	630	Open in IMG/M
3300004460\|Ga0066222_1111043	Not Available	726	Open in IMG/M
3300006029\|Ga0075466_1022837	All Organisms → Viruses → Predicted Viral	2009	Open in IMG/M
3300006029\|Ga0075466_1033493	All Organisms → Viruses → Predicted Viral	1591	Open in IMG/M
3300006164\|Ga0075441_10021039	All Organisms → Viruses → Predicted Viral	2698	Open in IMG/M
3300006164\|Ga0075441_10068164	All Organisms → Viruses → Predicted Viral	1389	Open in IMG/M
3300006164\|Ga0075441_10091241	All Organisms → Viruses → Predicted Viral	1173	Open in IMG/M
3300006164\|Ga0075441_10102488	All Organisms → Viruses → Predicted Viral	1097	Open in IMG/M
3300006164\|Ga0075441_10131941	Not Available	948	Open in IMG/M
3300006164\|Ga0075441_10371757	Not Available	518	Open in IMG/M
3300006165\|Ga0075443_10398751	Not Available	515	Open in IMG/M
3300006190\|Ga0075446_10045079	All Organisms → Viruses → Predicted Viral	1382	Open in IMG/M
3300006191\|Ga0075447_10043393	All Organisms → Viruses → Predicted Viral	1682	Open in IMG/M
3300006191\|Ga0075447_10141739	Not Available	811	Open in IMG/M
3300006191\|Ga0075447_10143235	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	806	Open in IMG/M
3300006191\|Ga0075447_10158951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	756	Open in IMG/M
3300006191\|Ga0075447_10242807	Not Available	584	Open in IMG/M
3300006191\|Ga0075447_10244886	Not Available	581	Open in IMG/M
3300006191\|Ga0075447_10277467	Not Available	540	Open in IMG/M
3300006191\|Ga0075447_10295292	Not Available	521	Open in IMG/M
3300006193\|Ga0075445_10054860	All Organisms → Viruses → Predicted Viral	1571	Open in IMG/M
3300006193\|Ga0075445_10147266	Not Available	848	Open in IMG/M
3300006352\|Ga0075448_10090837	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	960	Open in IMG/M
3300006352\|Ga0075448_10157035	Not Available	703	Open in IMG/M
3300006947\|Ga0075444_10023596	All Organisms → Viruses → Predicted Viral	3149	Open in IMG/M
3300006947\|Ga0075444_10133064	All Organisms → Viruses → Predicted Viral	1056	Open in IMG/M
3300006947\|Ga0075444_10184568	Not Available	852	Open in IMG/M
3300006947\|Ga0075444_10258017	Not Available	683	Open in IMG/M
3300007229\|Ga0075468_10173803	Not Available	640	Open in IMG/M
3300007229\|Ga0075468_10183361	Not Available	618	Open in IMG/M
3300007276\|Ga0070747_1113538	Not Available	992	Open in IMG/M
3300008999\|Ga0102816_1234779	Not Available	576	Open in IMG/M
3300009422\|Ga0114998_10113001	All Organisms → Viruses → Predicted Viral	1330	Open in IMG/M
3300009422\|Ga0114998_10137962	All Organisms → Viruses → Predicted Viral	1180	Open in IMG/M
3300009512\|Ga0115003_10026828	All Organisms → Viruses → Predicted Viral	3777	Open in IMG/M
3300009526\|Ga0115004_10043022	All Organisms → Viruses → Predicted Viral	2933	Open in IMG/M
3300009526\|Ga0115004_11000428	Not Available	501	Open in IMG/M
3300009601\|Ga0114914_1052059	Not Available	658	Open in IMG/M
3300009601\|Ga0114914_1073273	Not Available	524	Open in IMG/M
3300009785\|Ga0115001_10624081	Not Available	657	Open in IMG/M
3300009785\|Ga0115001_10865407	Not Available	543	Open in IMG/M
3300010883\|Ga0133547_11038527	All Organisms → Viruses → Predicted Viral	1582	Open in IMG/M
3300021957\|Ga0222717_10000841	Not Available	25918	Open in IMG/M
3300022061\|Ga0212023_1000816	All Organisms → Viruses → Predicted Viral	2825	Open in IMG/M
3300022072\|Ga0196889_1013523	All Organisms → Viruses → Predicted Viral	1760	Open in IMG/M
3300022164\|Ga0212022_1009433	All Organisms → Viruses → Predicted Viral	1352	Open in IMG/M
3300022178\|Ga0196887_1031645	All Organisms → Viruses → Predicted Viral	1469	Open in IMG/M
3300025138\|Ga0209634_1009251	Not Available	6038	Open in IMG/M
3300025237\|Ga0208031_1000078	Not Available	37242	Open in IMG/M
3300025543\|Ga0208303_1003054	All Organisms → cellular organisms → Bacteria	6156	Open in IMG/M
3300025860\|Ga0209119_1051370	All Organisms → Viruses → Predicted Viral	2059	Open in IMG/M
3300025874\|Ga0209533_1035305	All Organisms → Viruses → Predicted Viral	3190	Open in IMG/M
3300027522\|Ga0209384_1025842	All Organisms → Viruses → Predicted Viral	1795	Open in IMG/M
3300027668\|Ga0209482_1011484	All Organisms → Viruses → Predicted Viral	4204	Open in IMG/M
3300027668\|Ga0209482_1012407	All Organisms → Viruses → Predicted Viral	3999	Open in IMG/M
3300027668\|Ga0209482_1018642	All Organisms → Viruses → Predicted Viral	3057	Open in IMG/M
3300027668\|Ga0209482_1025828	All Organisms → Viruses → Predicted Viral	2445	Open in IMG/M
3300027668\|Ga0209482_1028696	All Organisms → Viruses → Predicted Viral	2273	Open in IMG/M
3300027668\|Ga0209482_1064564	All Organisms → Viruses → Predicted Viral	1277	Open in IMG/M
3300027668\|Ga0209482_1212476	Not Available	529	Open in IMG/M
3300027668\|Ga0209482_1220982	Not Available	514	Open in IMG/M
3300027672\|Ga0209383_1024411	All Organisms → Viruses → Predicted Viral	2532	Open in IMG/M
3300027686\|Ga0209071_1006121	Not Available	4088	Open in IMG/M
3300027687\|Ga0209710_1000818	All Organisms → cellular organisms → Bacteria	26161	Open in IMG/M
3300027687\|Ga0209710_1203623	Not Available	672	Open in IMG/M
3300027704\|Ga0209816_1035681	All Organisms → Viruses → Predicted Viral	2399	Open in IMG/M
3300027704\|Ga0209816_1097288	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1157	Open in IMG/M
3300027704\|Ga0209816_1288764	Not Available	501	Open in IMG/M
3300027714\|Ga0209815_1002505	Not Available	11119	Open in IMG/M
3300027752\|Ga0209192_10000476	Not Available	39143	Open in IMG/M
3300028125\|Ga0256368_1027746	All Organisms → Viruses → Predicted Viral	1008	Open in IMG/M
3300028125\|Ga0256368_1076064	Not Available	573	Open in IMG/M
3300031141\|Ga0308021_10056838	All Organisms → Viruses → Predicted Viral	1616	Open in IMG/M
3300031142\|Ga0308022_1092279	Not Available	909	Open in IMG/M
3300031519\|Ga0307488_10046445	All Organisms → Viruses → Predicted Viral	3386	Open in IMG/M
3300031519\|Ga0307488_10055115	All Organisms → Viruses → Predicted Viral	3058	Open in IMG/M
3300031519\|Ga0307488_10062459	All Organisms → Viruses → Predicted Viral	2834	Open in IMG/M
3300031519\|Ga0307488_10168802	All Organisms → Viruses → Predicted Viral	1513	Open in IMG/M
3300031519\|Ga0307488_10220385	All Organisms → Viruses → Predicted Viral	1270	Open in IMG/M
3300031519\|Ga0307488_10234688	All Organisms → Viruses → Predicted Viral	1219	Open in IMG/M
3300031519\|Ga0307488_10254738	All Organisms → Viruses → Predicted Viral	1155	Open in IMG/M
3300031519\|Ga0307488_10764106	Not Available	539	Open in IMG/M
3300031569\|Ga0307489_10464751	Not Available	854	Open in IMG/M
3300031569\|Ga0307489_11182737	Not Available	551	Open in IMG/M
3300031599\|Ga0308007_10114485	Not Available	983	Open in IMG/M
3300031622\|Ga0302126_10234613	Not Available	640	Open in IMG/M
3300031629\|Ga0307985_10028132	All Organisms → Viruses → Predicted Viral	2521	Open in IMG/M
3300031659\|Ga0307986_10072358	All Organisms → Viruses → Predicted Viral	1732	Open in IMG/M
3300031659\|Ga0307986_10073993	All Organisms → Viruses → Predicted Viral	1708	Open in IMG/M
3300031659\|Ga0307986_10130775	All Organisms → Viruses → Predicted Viral	1185	Open in IMG/M
3300031660\|Ga0307994_1077074	All Organisms → Viruses → Predicted Viral	1242	Open in IMG/M
3300031687\|Ga0308008_1153931	Not Available	532	Open in IMG/M
3300031694\|Ga0308015_10153028	Not Available	945	Open in IMG/M
3300031695\|Ga0308016_10225285	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	712	Open in IMG/M
3300031700\|Ga0302130_1137874	Not Available	766	Open in IMG/M
3300031703\|Ga0308002_1038777	All Organisms → Viruses → Predicted Viral	1107	Open in IMG/M
3300031705\|Ga0308003_1046406	All Organisms → Viruses → Predicted Viral	1527	Open in IMG/M
3300031706\|Ga0307997_10024861	All Organisms → Viruses → Predicted Viral	2653	Open in IMG/M
3300031706\|Ga0307997_10234211	Not Available	667	Open in IMG/M
3300031706\|Ga0307997_10281138	Not Available	593	Open in IMG/M
3300031848\|Ga0308000_10071404	All Organisms → Viruses → Predicted Viral	1256	Open in IMG/M
3300033742\|Ga0314858_107486	Not Available	710	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	50.00%
Coastal	Environmental → Aquatic → Marine → Coastal	23.68%
Oceanic	Environmental → Aquatic → Marine → Oceanic	15.79%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	8.77%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	50.00%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	23.68%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	15.79%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	8.77%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.88%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.88%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	34.21%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	14.91%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	13.16%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	8.77%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	8.77%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	5.26%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	3.51%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	3.51%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	2.63%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	2.63%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.88%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.88%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000224	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 10m	Environmental	Open in IMG/M
3300001348	Pelagic Microbial community sample from North Sea - COGITO 998_met_04	Environmental	Open in IMG/M
3300001351	Pelagic Microbial community sample from North Sea - COGITO 998_met_03	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004457	Marine viral communities from Newfoundland, Canada MC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006165	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA	Environmental	Open in IMG/M
3300006190	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA	Environmental	Open in IMG/M
3300006191	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA	Environmental	Open in IMG/M
3300006193	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA	Environmental	Open in IMG/M
3300006352	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA	Environmental	Open in IMG/M
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300008999	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009601	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_38	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300022061	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)	Environmental	Open in IMG/M
3300022072	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)	Environmental	Open in IMG/M
3300022164	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2)	Environmental	Open in IMG/M
3300022178	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025237	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_38 (SPAdes)	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025860	Pelagic Microbial community sample from North Sea - COGITO 998_met_03 (SPAdes)	Environmental	Open in IMG/M
3300025874	Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes)	Environmental	Open in IMG/M
3300027522	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)	Environmental	Open in IMG/M
3300027668	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)	Environmental	Open in IMG/M
3300027672	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)	Environmental	Open in IMG/M
3300027686	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027704	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)	Environmental	Open in IMG/M
3300027714	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300028125	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB	Environmental	Open in IMG/M
3300031141	Marine microbial communities from water near the shore, Antarctic Ocean - #351	Environmental	Open in IMG/M
3300031142	Marine microbial communities from water near the shore, Antarctic Ocean - #353	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031569	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2	Environmental	Open in IMG/M
3300031599	Marine microbial communities from water near the shore, Antarctic Ocean - #71	Environmental	Open in IMG/M
3300031622	Marine microbial communities from Western Arctic Ocean, Canada - CB4_20m	Environmental	Open in IMG/M
3300031629	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #80	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300031660	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #261	Environmental	Open in IMG/M
3300031687	Marine microbial communities from water near the shore, Antarctic Ocean - #125	Environmental	Open in IMG/M
3300031694	Marine microbial communities from water near the shore, Antarctic Ocean - #231	Environmental	Open in IMG/M
3300031695	Marine microbial communities from water near the shore, Antarctic Ocean - #233	Environmental	Open in IMG/M
3300031700	Marine microbial communities from Western Arctic Ocean, Canada - CB9_surface	Environmental	Open in IMG/M
3300031703	Marine microbial communities from water near the shore, Antarctic Ocean - #34	Environmental	Open in IMG/M
3300031705	Marine microbial communities from water near the shore, Antarctic Ocean - #36	Environmental	Open in IMG/M
3300031706	Marine microbial communities from David Island wharf, Antarctic Ocean - #36	Environmental	Open in IMG/M
3300031848	Marine microbial communities from water near the shore, Antarctic Ocean - #3	Environmental	Open in IMG/M
3300033742	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_101171873	3300000101	Marine	MKDYKHKRLQASCEVRKQERLDKYLSIGLSALGALIGVFCIIYATHVALG*
DelMOSum2010_102731113	3300000101	Marine	KQERLDKYLSIGLSALGASIGVFCIIYATHVALN*
DelMOSpr2010_100208478	3300000116	Marine	MKDYTHKRLEASLEVRKQERLDKYLSIGLSVLGALIGIFCIIFATHVALG*
DelMOSpr2010_102321241	3300000116	Marine	MKDYKHKRLQASCEVRKQERLDKYLSICLSALGALIGVFCIIYATHVALG*
SI34jun09_10mDRAFT_10146351	3300000224	Marine	MEDYKHKRLEASCEVRKQERLDKYLSIGLSALGALIGVLCIIYATHVALG*
JGI20154J14316_100335104	3300001348	Pelagic Marine	MKDYTHKRLQASCEVRKQERLDKYLSIGLSVLGASIGVFCIIYATHVALN*
JGI20154J14316_100753394	3300001348	Pelagic Marine	MKDYTHKRLEASCEVRKQERLDKYLSIGLSVLGASIGVFCIIYATHVALG*
JGI20154J14316_101796952	3300001348	Pelagic Marine	MKDYKHKRLEASCEVRKQERLDKYLSIGLSALGALIGVFCIIYATHVAFN*
JGI20153J14318_100741822	3300001351	Pelagic Marine	MKDYTHKRLEASCEVRKQERLDKYLSRGLSALGALIGVFCIIYATHVALN*
JGI24006J15134_1000023741	3300001450	Marine	MKDYKHKRLQASCEVRKQERLDKYLSIGLSALGGSIGVFCIIYATHVAFN*
Ga0065861_10001243	3300004448	Marine	MKDYKHKRLQASCEVRKQERLDKYLSIGLSALGGLIGIFCIIYATHVALN*
Ga0066224_10153726	3300004457	Marine	ASCEVRKQERLDKYLSIGLSALGGLIGIFCIIYATHVALN*
Ga0066222_10466142	3300004460	Marine	MKDYKHKRLEASLEVRKQERLDKYLSIGLSVLGASIGIFCIIYATHVALN*
Ga0066222_11110433	3300004460	Marine	MQDYKHKRLEASLEVRKQERLDKYLSIGLSALGALIGVFCIIYATHVALG*
Ga0075466_10228371	3300006029	Aqueous	MKDYKHKRLEASCEVRKQERLDKYLSIGLSALGALIGVFCIIYATHVALN*
Ga0075466_10334936	3300006029	Aqueous	MKDYKHKRLEASCEVRKQERLDKYLSIGLSALGASIGVFCIIYATHVAFN*
Ga0075441_100210394	3300006164	Marine	MKDYKHKRLQASLEVRKQERLDKYLSLGLSALGSFIGVFCIIFATHVALG*
Ga0075441_100681644	3300006164	Marine	MKDYKHKSLEASLEVRKQKKLDRYLSLGLSALGAFIGVFCIIFATHVALG*
Ga0075441_100912412	3300006164	Marine	MKDYTHKRLQASLEVRKQERLDKYLSLGLSALGAFIGVFCIIFATHVALG*
Ga0075441_101024881	3300006164	Marine	MKDYKHKRLEASLEVRKQERLDKCLSLGLSALGALIGVFCII
Ga0075441_101319411	3300006164	Marine	MKDYTHKRLEASLEVRKQERLDRYLSLGLSALGAFIGVFCIIFA
Ga0075441_103717572	3300006164	Marine	MKDYTHKRLEASLEVRKQKKLDRYLSLGLSALGALIGVFCIIFATHVALG*
Ga0075443_103987512	3300006165	Marine	MKDYKHKRLEASLEVRKQERLDKCLSLGLSALGALIGVFCIIFATHVALG*
Ga0075446_100450791	3300006190	Marine	MKDYKHKRLQTSLEVRKQERLDRYLSLGLSVLGALIGVFCIIFATHVALG*
Ga0075447_100433935	3300006191	Marine	MKDYTHKRLEASLEVRKQERLDKYLSLGLSALGAFIGVFCIIFATHVALN*
Ga0075447_101417391	3300006191	Marine	MKDYKHKSLQASLEVRKQERLDKYLSLGLSALGALIGVFCIIFATHVALG*
Ga0075447_101432353	3300006191	Marine	MKDYKHKRLEASLEVRKQERLDKCLSLGLSALGALIGVFCI
Ga0075447_101589511	3300006191	Marine	MKDYTHKRLEASLEVRKQARLDRYLSIGLSTLGAIIGVFCIIFATHVALG*
Ga0075447_102428072	3300006191	Marine	MKDYKHKRLEASLEVRKQKKLDRYLSLGLSALGALIGVFCIIFATHVALN*
Ga0075447_102448862	3300006191	Marine	MKDYKHKSLKASLEVRKQERLDRYLSLGLSALGALIGVFCIIFATHVALN*
Ga0075447_102774673	3300006191	Marine	HKMKDYKHKRLEASLEVRKQERLDRYLSLGLSALGALIGVFCIIFATHVALN*
Ga0075447_102952922	3300006191	Marine	MKDYKHKSLQASLEVRKQERLDRYLSPGLSALGALIGVFCIIFATHVALG*
Ga0075445_100548601	3300006193	Marine	RLEASLEVRKQERLDRYLSLGLSALGALIGVFCIIFATHVALN*
Ga0075445_101472662	3300006193	Marine	MLAGAHKMKDYKHKRLQASLEVRKQERLDKYLSLGLSVLGAFIGVFCIIFATHVALG*
Ga0075448_100908372	3300006352	Marine	MKDYKHKRLQASLEVRKQERLDRYLSLGLSALGAFIGVFCIIFATHVALG*
Ga0075448_101570352	3300006352	Marine	MKDYKHKRLEASLEVRKQERLDRYLSLGLSALGALIGVFCIIFATHVALG*
Ga0075444_100235961	3300006947	Marine	MKDYTHKRLKASLEVRKQERLDKYLSLGLSALGALIGVFCII
Ga0075444_101330642	3300006947	Marine	MKDYTHKRLEASLEVRKQERLDRYLSLGLSALGAFIGVFCIIFATHVALN*
Ga0075444_101845682	3300006947	Marine	MKDYKHKRLQASLEVRKQERLDKYLSLGLSVLGAFIGVFCIIFATHVALG*
Ga0075444_102580172	3300006947	Marine	MKDYKHKSLQASLEVRKQERLDKYLSLGLSALGALIGVFCIIFATHVALN*
Ga0075468_101738031	3300007229	Aqueous	KDYKHKRLQASCEVRKQERLDKYLSIGLSALGASIGVFCIIYATHVALN*
Ga0075468_101833612	3300007229	Aqueous	MKDYKHKRLEASCEVRKQERLDKYLSIGLSALGALIGVFCVIYATHVALG*
Ga0070747_11135382	3300007276	Aqueous	MKDYTHKRLEASCEVRKQERLDKYLSIGLSALGASIGVFCIIYATHVALN*
Ga0102816_12347792	3300008999	Estuarine	MQDYKHKRLEASLEVRKQERLDKYIGLGLSFLGGLIGVLCIIYATCVAFN*
Ga0114998_101130014	3300009422	Marine	MKDYKHKRLQASCEVRKQERLDKYLSIGLSALGGLIGLFCIIYATHVALN*
Ga0114998_101379621	3300009422	Marine	MQDYKHKRLQASCEVRKQERLDKYIGLGLSALGASIGVFCIIYATHVAFN*
Ga0115003_100268281	3300009512	Marine	TKQRKIKHVTKKRGNTMKDYKHKRLQASCEVRKQERLDKYLSIGLSALGGLIGVFCIIYATHVALN*
Ga0115004_100430224	3300009526	Marine	MKDYKHKRLQASCEVRKQERLDKYLSIGLSALGGLIGVFCIIYATHVALN*
Ga0115004_110004281	3300009526	Marine	MKDYKHKRLQASCEVRKQERLDKYLSIGLSALGASIGVFCIIYATHVALG*
Ga0114914_10520593	3300009601	Deep Ocean	MKDYKHKRLEASLEVRKQERLDRYLSLGLSALGALIGVFCIIFAT
Ga0114914_10732731	3300009601	Deep Ocean	HKRLEASLEVRKQERLDRYLSLGLSALGALIGVFCIIFATHVALN*
Ga0115001_106240812	3300009785	Marine	MKDYKHKRLEASLEVRKQERLDKYLSIGLSALGALIGVFCIIYATHVALG*
Ga0115001_108654071	3300009785	Marine	HVTKKRGNTMKDYKHKRLQASCEVRKQERLDKYLSIGLSALGASIGIFCIIYATHVALG*
Ga0133547_110385274	3300010883	Marine	MKDYKHKRLQASCEVRKQERLDKYLSIGLSALGASIGVFCIIYATHVAFN*
Ga0222717_1000084128	3300021957	Estuarine Water	MKDYKHKRLEASLEVRKQERLDKYIGLGLSVLGGFIGVFCIIYATHVAFN
Ga0212023_10008162	3300022061	Aqueous	MKDYKHKRLEASCEVRKQERLDKYLSIGLSALGALIGVFCIIYATHVALN
Ga0196889_10135236	3300022072	Aqueous	MKDYKHKRLEASCEVRKQERLDKYLSIGLSALGASIGVFCIIYATHVAFN
Ga0212022_10094334	3300022164	Aqueous	MKDYKHKRLEASCEVRKQERLDKYLSIGLSALGALIGVFCVIYATHVALG
Ga0196887_10316455	3300022178	Aqueous	MKDYKHKRLQASCEVRKQERLDKYLSIGLSALGALIGVFCIIYATHVALG
Ga0209634_10092519	3300025138	Marine	MKDYKHKRLQASCEVRKQERLDKYLSIGLSALGGSIGVFCIIYATHVAFN
Ga0208031_10000786	3300025237	Deep Ocean	MKDYKHKRLEASLEVRKQERLDRYLSLGLSALGALIGVFCIIFATHVALG
Ga0208303_10030544	3300025543	Aqueous	MKDYKHKRLQASCEVRKQERLDKYLSICLSALGALIGVFCIIYATHVALG
Ga0209119_10513705	3300025860	Pelagic Marine	MKDYTHKRLEASCEVRKQERLDKYLSRGLSALGALIGVFCIIYATHVALN
Ga0209533_10353055	3300025874	Pelagic Marine	MKDYTHKRLQASCEVRKQERLDKYLSIGLSVLGASIGVFCIIYATHVALN
Ga0209384_10258424	3300027522	Marine	MKDYKHKRLQTSLEVRKQERLDRYLSLGLSVLGALIGVFCIIFATHVALG
Ga0209482_10114842	3300027668	Marine	MKDYTHKRLEASLEVRKQERLDKYLSLGLSALGAFIGVFCIIFATHVALN
Ga0209482_101240710	3300027668	Marine	MKDYKHKRLEASLEVRKQKKLDRYLSLGLSALGALIGVFCIIFATHVALN
Ga0209482_10186426	3300027668	Marine	MKDYKHKRLQASLEVRKQERLDRYLSLGLSALGAFIGVFCIIFATHVALG
Ga0209482_10258283	3300027668	Marine	MKDYTHKRLQASLEVRKQERLDKYLSLGLSALGAFIGVFCIIFATHVALG
Ga0209482_10286966	3300027668	Marine	MKDYKHKSLQASLEVRKQERLDKYLSLGLSALGALIGVFCIIFATHVALG
Ga0209482_10645641	3300027668	Marine	HKRLEASLEVRKQERLDRYLSLGLSALGALIGVFCIIFATHVALN
Ga0209482_12124762	3300027668	Marine	MKDYKHKSLQASLEVRKQERLDKYLSLGLSALGALIGVFCIIFATHVALN
Ga0209482_12209821	3300027668	Marine	LQASLEVRKQERLDRYLSLGLSALGALIGVFCIIFATHVALG
Ga0209383_10244112	3300027672	Marine	MKDYKHKSLEASLEVRKQKKLDRYLSLGLSALGAFIGVFCIIFATHVALG
Ga0209071_10061219	3300027686	Marine	MKDYTHKRLEASLEVRKQARLDRYLSIGLSTLGAIIGVFCIIFATHVALG
Ga0209710_10008184	3300027687	Marine	MKDYKHKRLQASCEVRKQERLDKYLSIGLSALGGLIGVFCIIYATHVALN
Ga0209710_12036232	3300027687	Marine	MQDYKHKRLQASCEVRKQERLDKYIGLGLSALGASIGVFCIIYATHVAFN
Ga0209816_10356816	3300027704	Marine	MKDYKHKRLQASLEVRKQERLDKYLSLGLSVLGAFIGVFCIIFATHVALG
Ga0209816_10972884	3300027704	Marine	MKDYKHKRLQASLEVRKQERLDKYLSLGLSVLGALIGVFCIIFATHVALG
Ga0209816_12887642	3300027704	Marine	MKDYTHKRLEASLEVRKQKKLDRYLSLGLSALGALIGVFCIIFATHVALG
Ga0209815_100250515	3300027714	Marine	MKDYKHKRLQASLEVRKQERLDKYLSLGLSALGSFIGVFCIIFATHVALG
Ga0209192_1000047617	3300027752	Marine	MKDYKHKRLQASCEVRKQERLDKYLSIGLSALGGLIGLFCIIYATHVALN
Ga0256368_10277463	3300028125	Sea-Ice Brine	MKDYKHKRLQASCEVRKQERLDKYIGLGLSALGGLIGVFCVIYATHVALG
Ga0256368_10760642	3300028125	Sea-Ice Brine	MKDYKHKRLEASCEVRKQERLDKYLSIGLSALGASIGVFCIIYATHVALG
Ga0308021_100568381	3300031141	Marine	MKDYKHKRLEASLEVRKQKRLDRYLSLGLSALGSFIGVFCIIFATHVALG
Ga0308022_10922791	3300031142	Marine	AGAYKMKDYKHKRLEASLEVRKQKRLDRYLSLGLSALGSFIGVFCIIFATHVALG
Ga0307488_100464456	3300031519	Sackhole Brine	MKDYKHKRLESSLEVRKQERLDKYLSLALSVLGALIGVFCIIYATHVALG
Ga0307488_100551155	3300031519	Sackhole Brine	MKDYKHKRLEASYEVRKQERLDKYIGLGLSALGASIGVFCIIYATHVAFN
Ga0307488_100624594	3300031519	Sackhole Brine	MKDYKHKRLQASCEVRKQERLDKYLSIGLSALGGLIGVFCVIYATHVALG
Ga0307488_101688023	3300031519	Sackhole Brine	MQDYKHKRLQASCEVRKQERLDKYLSIGLSALGASIGVFCIIYATHVALG
Ga0307488_102203854	3300031519	Sackhole Brine	MKDYKHKRLQASCEVRKQERLDKYLSIGLSALGALIGVFCIIYATHVAFN
Ga0307488_102346881	3300031519	Sackhole Brine	MKDYKHKRLEASLEVRKQERLDKYLSLALSALGALIGVFCIIYATHVAFN
Ga0307488_102547382	3300031519	Sackhole Brine	MKDYKHKRLEASCEVRKQARLDKYLSIGISTLGALIGVFCIIFATHVALN
Ga0307488_107641062	3300031519	Sackhole Brine	MKDYKHKRLEASLEVRKQERLDKYLSIGLSALGGLIGIFCIIYATHVAFN
Ga0307489_104647514	3300031569	Sackhole Brine	RGYKMKDYKHKRLEASLEVRKQARLDKYLSIGLSTLGALIGIFCIVFATHVALG
Ga0307489_111827372	3300031569	Sackhole Brine	MQDYKHKRLQASCEVRKQERLDKYLSIGLSALGASIGVFCIIYATHVAFN
Ga0308007_101144853	3300031599	Marine	MKDYKHKRLEASLEVRKQERLDKYLSLGLSALGALIGVFCIIFATHVALN
Ga0302126_102346133	3300031622	Marine	MKDYKHKRLQASCEVRKQERLDKYLSIGLSALGALIGVFC
Ga0307985_100281324	3300031629	Marine	MKDYKHKSLEASLEVRKQERLDRYLSLGLSALGAFIGVFCIIFATHVALG
Ga0307986_100723584	3300031659	Marine	MKDYTHKRLEASLEVRKQERLDRYLSLGLSVLGALIGVFCIIFATHVALG
Ga0307986_100739931	3300031659	Marine	LEVRKQERLDRYLSLGLSALGAFIGVFCIIFATHVALG
Ga0307986_101307752	3300031659	Marine	MLGEEYKMKDYTHKRLEASLEVRKQERLDRYLSLGLSALGALIGVFCIIFATHVALG
Ga0307994_10770745	3300031660	Marine	MLGEEYKMKDYKHKSLQASLEVRKQERLDRYLSLGLSALGAFIGVFCIIFATHVALN
Ga0308008_11539312	3300031687	Marine	MKDYTHKSLEASLEVRKQERLDRYLSLGLSVLGAFIGVFCIIFATHVALG
Ga0308015_101530283	3300031694	Marine	MKDYTHKRLEASLEVRKQERLDRYLSLGLSVLGALIGVFCIIFATHAALGQ
Ga0308016_102252853	3300031695	Marine	MKDYTHKSLQASLEVRKQERLDRYLSLGLSALGAFIGV
Ga0302130_11378743	3300031700	Marine	MKDYKHKRLQASCEVRKQERLDKYLSIGLSALGASIGIFCIIYATHVALG
Ga0308002_10387773	3300031703	Marine	MKDYKHKRLEASLEVRKQERLDKYLSLGLSALGAFIGVFCIIFATHVALG
Ga0308003_10464063	3300031705	Marine	MKDYKHKSLEASLEVRKQERLDKYLSLGLSALGALIGVFCIIFATHVALN
Ga0307997_100248613	3300031706	Marine	MKDYKHKRLEASLEVRKQERLDRYLSLGLSALGALIGVFCIIFATHVALN
Ga0307997_102342113	3300031706	Marine	MKDYTHKRLQASLEVRKQERLDRYLSLSLSALGALIGVFCIIFATHV
Ga0307997_102811382	3300031706	Marine	MLGEEYKMKDYTHKRLEASLEVRKQERLDRYLSLGLSVLGALIGVFCIIFATHVALS
Ga0308000_100714045	3300031848	Marine	KMLAGAHKMKDYKHKRLQASLEVRKQERLDRYLSLSLSALGALIGVFCIIFATHVALG
Ga0314858_107486_146_298	3300033742	Sea-Ice Brine	MKDYKHKRLQASCEVRKQERLDKYLSIGLSALGALIGVFCIIYATHVALN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081777

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences