Metagenome / Metatranscriptome Family F081722

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081722
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	47 residues
Representative Sequence	VNLLVLDESLDLAVVVGRIAPVRGWEPHFVGSLHELELAVQAHGRPA
Number of Associated Samples	105
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.12 %
% of genes from short scaffolds (< 2000 bps)	78.95 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.368 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (13.158 % of family members)
Environment Ontology (ENVO)	Unclassified (26.316 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.474 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.00% β-sheet: 16.00% Coil/Unstructured: 52.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00990	GGDEF	63.16
PF02954	HTH_8	23.68
PF00072	Response_reg	3.51
PF00550	PP-binding	0.88
PF07589	PEP-CTERM	0.88
PF13378	MR_MLE_C	0.88
PF00534	Glycos_transf_1	0.88
PF00440	TetR_N	0.88
PF02621	VitK2_biosynth	0.88
PF02522	Antibiotic_NAT	0.88
PF00528	BPD_transp_1	0.88
PF08543	Phos_pyr_kin	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0351	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	Coenzyme transport and metabolism [H]	0.88
COG0524	Sugar or nucleoside kinase, ribokinase family	Carbohydrate transport and metabolism [G]	0.88
COG1427	Chorismate dehydratase (menaquinone biosynthesis, futalosine pathway)	Coenzyme transport and metabolism [H]	0.88
COG2240	Pyridoxal/pyridoxine/pyridoxamine kinase	Coenzyme transport and metabolism [H]	0.88
COG2746	Aminoglycoside N3'-acetyltransferase	Defense mechanisms [V]	0.88
COG2870	ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.37 %
Unclassified	root	N/A	2.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.37 %
Unclassified	root	N/A	2.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.37 %
Unclassified	root	N/A	2.63 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	66.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.05 %
Unclassified	root	N/A	2.63 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	66.67 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	7.89 %
Unclassified	root	N/A	2.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	66.67 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7.89 %
Unclassified	root	N/A	2.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7.89 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	3.51 %
Unclassified	root	N/A	2.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7.89 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3.51 %
Unclassified	root	N/A	2.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8704747	All Organisms → cellular organisms → Bacteria → Proteobacteria	1168	Open in IMG/M
2228664021\|ICCgaii200_c0987174	All Organisms → cellular organisms → Bacteria	2630	Open in IMG/M
2228664021\|ICCgaii200_c0987922	All Organisms → cellular organisms → Bacteria → Proteobacteria	1205	Open in IMG/M
3300000881\|JGI10215J12807_1096054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6074	Open in IMG/M
3300000956\|JGI10216J12902_106024269	Not Available	572	Open in IMG/M
3300001139\|JGI10220J13317_10727531	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	857	Open in IMG/M
3300002245\|JGIcombinedJ26739_100213746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1821	Open in IMG/M
3300002245\|JGIcombinedJ26739_100595088	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	983	Open in IMG/M
3300003371\|JGI26145J50221_1015092	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	712	Open in IMG/M
3300003505\|JGIcombinedJ51221_10141958	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	968	Open in IMG/M
3300004463\|Ga0063356_101727506	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	937	Open in IMG/M
3300004479\|Ga0062595_100512651	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	905	Open in IMG/M
3300005289\|Ga0065704_10195370	All Organisms → cellular organisms → Bacteria → Proteobacteria	1170	Open in IMG/M
3300005341\|Ga0070691_10004764	All Organisms → cellular organisms → Bacteria	6173	Open in IMG/M
3300005345\|Ga0070692_10111380	All Organisms → cellular organisms → Bacteria → Proteobacteria	1514	Open in IMG/M
3300005355\|Ga0070671_100655844	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	909	Open in IMG/M
3300005434\|Ga0070709_11286673	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	589	Open in IMG/M
3300005440\|Ga0070705_101030245	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	670	Open in IMG/M
3300005445\|Ga0070708_101242284	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	696	Open in IMG/M
3300005468\|Ga0070707_100024844	All Organisms → cellular organisms → Bacteria	5679	Open in IMG/M
3300005468\|Ga0070707_101160627	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	738	Open in IMG/M
3300005468\|Ga0070707_102150597	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	525	Open in IMG/M
3300005536\|Ga0070697_100089417	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2544	Open in IMG/M
3300005536\|Ga0070697_100197137	All Organisms → cellular organisms → Bacteria	1711	Open in IMG/M
3300005539\|Ga0068853_100410134	All Organisms → cellular organisms → Bacteria → Proteobacteria	1269	Open in IMG/M
3300005545\|Ga0070695_100023392	All Organisms → cellular organisms → Bacteria	3796	Open in IMG/M
3300005764\|Ga0066903_103140043	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	894	Open in IMG/M
3300005875\|Ga0075293_1006884	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1217	Open in IMG/M
3300005875\|Ga0075293_1019461	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	851	Open in IMG/M
3300005886\|Ga0075286_1072330	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	507	Open in IMG/M
3300006050\|Ga0075028_100195213	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1090	Open in IMG/M
3300006172\|Ga0075018_10095363	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1312	Open in IMG/M
3300006175\|Ga0070712_100523527	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	996	Open in IMG/M
3300006755\|Ga0079222_10140964	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1352	Open in IMG/M
3300009093\|Ga0105240_10679487	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1126	Open in IMG/M
3300009821\|Ga0105064_1043327	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	859	Open in IMG/M
3300010362\|Ga0126377_10533127	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300010362\|Ga0126377_10819915	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	990	Open in IMG/M
3300010400\|Ga0134122_11577659	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	679	Open in IMG/M
3300011271\|Ga0137393_10175726	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1799	Open in IMG/M
3300012133\|Ga0137329_1036769	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	627	Open in IMG/M
3300012203\|Ga0137399_10839999	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	773	Open in IMG/M
3300012205\|Ga0137362_10299050	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1393	Open in IMG/M
3300012210\|Ga0137378_10440426	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1207	Open in IMG/M
3300012902\|Ga0157291_10027984	All Organisms → cellular organisms → Bacteria → Proteobacteria	1188	Open in IMG/M
3300012927\|Ga0137416_10426844	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1128	Open in IMG/M
3300012931\|Ga0153915_12281931	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	633	Open in IMG/M
3300012948\|Ga0126375_10598930	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	841	Open in IMG/M
3300012958\|Ga0164299_10012315	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3242	Open in IMG/M
3300012961\|Ga0164302_10537407	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	834	Open in IMG/M
3300013100\|Ga0157373_10671760	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	758	Open in IMG/M
3300013102\|Ga0157371_10174240	All Organisms → cellular organisms → Bacteria → Proteobacteria	1538	Open in IMG/M
3300014321\|Ga0075353_1233531	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300015372\|Ga0132256_101697936	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	741	Open in IMG/M
3300017973\|Ga0187780_10048924	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2936	Open in IMG/M
3300018032\|Ga0187788_10282051	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	668	Open in IMG/M
3300018051\|Ga0184620_10160684	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	731	Open in IMG/M
3300018075\|Ga0184632_10237098	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	799	Open in IMG/M
3300018078\|Ga0184612_10018811	All Organisms → cellular organisms → Bacteria	3539	Open in IMG/M
3300018078\|Ga0184612_10392155	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	698	Open in IMG/M
3300018422\|Ga0190265_11133183	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	902	Open in IMG/M
3300018429\|Ga0190272_12952808	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	526	Open in IMG/M
3300019879\|Ga0193723_1038811	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1419	Open in IMG/M
3300019881\|Ga0193707_1011991	All Organisms → cellular organisms → Bacteria	2933	Open in IMG/M
3300019887\|Ga0193729_1100718	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1100	Open in IMG/M
3300020579\|Ga0210407_10214921	All Organisms → cellular organisms → Bacteria → Proteobacteria	1495	Open in IMG/M
3300020580\|Ga0210403_10756084	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	775	Open in IMG/M
3300020581\|Ga0210399_10420443	All Organisms → cellular organisms → Bacteria → Proteobacteria	1114	Open in IMG/M
3300021080\|Ga0210382_10077586	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1355	Open in IMG/M
3300021088\|Ga0210404_10047158	All Organisms → cellular organisms → Bacteria → Proteobacteria	2010	Open in IMG/M
3300021560\|Ga0126371_12730906	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	599	Open in IMG/M
3300022726\|Ga0242654_10196858	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	699	Open in IMG/M
3300023266\|Ga0247789_1139862	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300025885\|Ga0207653_10008421	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3211	Open in IMG/M
3300025885\|Ga0207653_10329585	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	594	Open in IMG/M
3300025901\|Ga0207688_10056182	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2211	Open in IMG/M
3300025910\|Ga0207684_10380977	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1213	Open in IMG/M
3300025911\|Ga0207654_10036111	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2759	Open in IMG/M
3300025917\|Ga0207660_11045360	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	666	Open in IMG/M
3300025919\|Ga0207657_10000591	All Organisms → cellular organisms → Bacteria	38405	Open in IMG/M
3300025920\|Ga0207649_10938091	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	679	Open in IMG/M
3300025981\|Ga0207640_10295415	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1279	Open in IMG/M
3300026001\|Ga0208000_103103	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	916	Open in IMG/M
3300026351\|Ga0257170_1007914	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1282	Open in IMG/M
3300026377\|Ga0257171_1004005	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2256	Open in IMG/M
3300026490\|Ga0257153_1015762	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1533	Open in IMG/M
3300026498\|Ga0257156_1000644	All Organisms → cellular organisms → Bacteria	6117	Open in IMG/M
3300026499\|Ga0257181_1031906	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	829	Open in IMG/M
3300026514\|Ga0257168_1020830	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1353	Open in IMG/M
3300026551\|Ga0209648_10833741	Not Available	504	Open in IMG/M
3300027471\|Ga0209995_1003696	All Organisms → cellular organisms → Bacteria → Proteobacteria	2440	Open in IMG/M
3300027526\|Ga0209968_1000494	All Organisms → cellular organisms → Bacteria → Proteobacteria	6251	Open in IMG/M
3300027543\|Ga0209999_1026531	All Organisms → cellular organisms → Bacteria → Proteobacteria	1071	Open in IMG/M
3300027552\|Ga0209982_1017975	All Organisms → cellular organisms → Bacteria → Proteobacteria	1080	Open in IMG/M
3300027605\|Ga0209329_1071472	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	749	Open in IMG/M
3300027717\|Ga0209998_10105573	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	701	Open in IMG/M
3300027862\|Ga0209701_10545213	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	624	Open in IMG/M
3300027876\|Ga0209974_10000082	All Organisms → cellular organisms → Bacteria	26095	Open in IMG/M
3300027894\|Ga0209068_10068498	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1829	Open in IMG/M
3300028047\|Ga0209526_10040394	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3281	Open in IMG/M
3300028792\|Ga0307504_10207631	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	697	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1130073	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	554	Open in IMG/M
3300031421\|Ga0308194_10171039	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	684	Open in IMG/M
3300031720\|Ga0307469_10232223	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1468	Open in IMG/M
3300031740\|Ga0307468_100037488	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2394	Open in IMG/M
3300031820\|Ga0307473_10448352	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	858	Open in IMG/M
3300031962\|Ga0307479_10969533	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	820	Open in IMG/M
3300032205\|Ga0307472_100943921	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	803	Open in IMG/M
3300032829\|Ga0335070_11229333	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	687	Open in IMG/M
3300033433\|Ga0326726_10339744	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1415	Open in IMG/M
3300033501\|Ga0326732_1005354	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2492	Open in IMG/M
3300033513\|Ga0316628_100324199	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1926	Open in IMG/M
3300034090\|Ga0326723_0287752	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	736	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.58%
Host-Associated	Host-Associated	18.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.81%
Plants	Host-Associated → Plants	18.42%
Aquatic	Environmental → Aquatic	8.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.40%
Sediment	Environmental → Aquatic → Sediment	7.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.02%
Peat	Environmental → Terrestrial → Peat	2.63%
Freshwater	Environmental → Aquatic → Freshwater	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.23%
Loam	Environmental → Terrestrial → Soil → Loam	19.30%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.51%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.63%
Sand	Environmental → Terrestrial → Soil → Sand	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.75%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.02%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.51%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.63%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.77%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	7.02%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.39%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.51%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	3.51%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.63%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.75%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.75%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.88%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.88%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.88%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.88%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.88%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.88%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003371	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM	Host-Associated	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012133	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT121_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026001	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104 (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027471	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033501	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF12FN SIP fraction	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_02491190	2088090015	Soil	VNLLVLDESLDLAMVIGRLAPARGWEPHFVGSLHELEVAVAAQGRPALTVVNL
ICCgaii200_09871744	2228664021	Soil	VNVLVLDETMELAVPIRGLAGISGWEPHFVGSLHELEVAVAAQGRPALTVV
ICCgaii200_09879223	2228664021	Soil	VNLLVLDESLDLAMVIGRLAPARGWEPHFVGSLHELE
JGI10215J12807_10960541	3300000881	Soil	MNLLVLDESLELALLIGRIAPLRGWQPHFIGSLHEMELA
JGI10216J12902_1060242691	3300000956	Soil	VNLLVLDESLEFAVLIARLAPVRGWQSHFVGSLHELELTVRAQGRPGLTVVNLQAPLTA
JGI10220J13317_107275312	3300001139	Soil	VNLLVLDESLDLAMVIGRLAPARGWEPHFVGSLHELEVAV
JGIcombinedJ26739_1002137461	3300002245	Forest Soil	VNLLVLDESLDLAMVVGRIAPVRGWEPHFVGSLHELEQAVQAHGRP
JGIcombinedJ26739_1005950881	3300002245	Forest Soil	VNLLVLDESLELAMVVGRIAPVRGWEPHFVGSLHELELAVQAHGRPALTVVNLQPPLTA
JGI26145J50221_10150921	3300003371	Arabidopsis Thaliana Rhizosphere	MNLLVLDESLELALLIGRIAPLRGWQPHFIGSLHEMELAVQAHGRPALTVVNL
JGIcombinedJ51221_101419581	3300003505	Forest Soil	VNLLVLDESLELAVNIRNLALLRGWQPRFVGSLHELELAVGAQGRPG
Ga0063356_1017275061	3300004463	Arabidopsis Thaliana Rhizosphere	VNLLVLDESLDLAMVIGRLAPARGWEPHFVGSLHELEVAVAAQ
Ga0062595_1005126511	3300004479	Soil	VNLLVLDESLELAMVVGRMAPVRGWEPHFVGSLHELELAVQAHGRPALTVVN
Ga0065704_101953703	3300005289	Switchgrass Rhizosphere	VNVLVLDESLELAGVVGRLAPLRGWQAHFLGSLLELELGIRAYGRPELVIVNLQA
Ga0065715_107187561	3300005293	Miscanthus Rhizosphere	VNVLVLDETMELAVPIRGLAGISGWEPHFVGSLHELEVAVAAQG
Ga0070691_100047641	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VNLLVLDESLDLAMVIGRLAPARGWEPHFVGSLHELEVAVAAQGRPALTVV
Ga0070692_101113803	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VNVLVLDESLDLAGVVGRLAPLRGWEPHFLGSLLELELGVRTYGRPGLVIVNLQAPLT
Ga0070671_1006558441	3300005355	Switchgrass Rhizosphere	VNLLVLDESLDLAMVIGRLAPARGWEPHFVGSLHELEVAVAAQG
Ga0070709_112866731	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VNLLVLDESLELAMVVGRMAPVRGWEPHFVGSLHELELAVQAHGRPALTVVNLQP
Ga0070705_1010302452	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VNLLVLDESLELAMVVGRMAPVRGWEPHFVGSLHELELAVQAHGR
Ga0070708_1012422842	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VNLLVLDESLELAVLIGRLAPLRGWQPHFVGSLHEVELAVQ
Ga0070707_1000248448	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VNLLVLDESLDLAVVVGRIAPVRGWEPHFVGSLHELEQAVQAHGRPALTVV
Ga0070707_1011606271	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VNLLVLDESLDLAVVVRRIAPVRGWEPHFVGSLHELEQAVQAHGRPALTVVNLQ
Ga0070707_1021505971	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VNLLVLDESLELAVLIGRLAPLRGWQPHFVGSLHEVELAVQAHGRPALLVVNLQPPLTGW
Ga0070697_1000894173	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VNLLVLDESLDLAVVVGRLAPVRGWEPHFVGSLHELELAVQAHGRPALT
Ga0070697_1001971371	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VNLLVLDESLDLAMVIGRLAPARGWQPHFVGSLHELEVAVAAQGRPALTVVN
Ga0068853_1004101343	3300005539	Corn Rhizosphere	MNLLVLDESLELALLIGRIAPLNGWQPHFIGSLHEMELAV
Ga0070695_1000233921	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MNLLVLDESLELALLIGRIAPLRGWQPHFIGSLHEMELAVQAHGRPALTVVN
Ga0066903_1031400431	3300005764	Tropical Forest Soil	MNLLVLDESLELALLIGRIAPLRGWQPHFIGSLHEMELAVQAHG
Ga0075293_10068841	3300005875	Rice Paddy Soil	MNLLVLDESLELAVMLGRLAPGRGWRPHFVGSLHELELA
Ga0075293_10194611	3300005875	Rice Paddy Soil	VNLLVLDESLDLAVVVGRLAPVRGWEPHFVGSLHELELAVQAHGRPALTVV
Ga0075286_10723302	3300005886	Rice Paddy Soil	VNLLVLDESLDLAVVVGRIAPVRGWEPHFVGSLHELELAVQAHGRPA
Ga0075028_1001952131	3300006050	Watersheds	VNLLVLDESLDLAIVVGRIAPVRGWEPHFVGSLHELEQAV
Ga0075018_100953631	3300006172	Watersheds	VNLLVLDESLDLAIVVGRIAPVRGWEPHFVGSLHELEQAVQA
Ga0070712_1005235272	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VNLLVLDESLELAMVVGRMAPVRGWEPHFVGSLHELELAVQ
Ga0079222_101409643	3300006755	Agricultural Soil	VNLLVLDESLDLAMVIGRLAPARGWQPHFVGSLHELEVAVAA
Ga0105240_106794873	3300009093	Corn Rhizosphere	VNLLVLDESLDLAMVIGRLAPARGWEPHFVGSLHELEVAVAA
Ga0105064_10433271	3300009821	Groundwater Sand	VNLLVLDESLELAVLIGRLAPLRGWQPHFVGSLHEVELAVQAHGRPALLV
Ga0126377_105331271	3300010362	Tropical Forest Soil	MNLLVLDESLELALSIGRSFSLRGWQPRFVGSLHELELAVQAHGRPA
Ga0126377_108199153	3300010362	Tropical Forest Soil	MNLLVLDESLELALLIGRIAPLRGWQPHFIGSLHEMELAVQAHGR
Ga0134122_115776592	3300010400	Terrestrial Soil	VNLLVLDESLDLAMVVGRIAPVRGWEPHFVGSLHELEQAVQAHGRPA
Ga0137393_101757263	3300011271	Vadose Zone Soil	VNVLVLDESLELAGVVGRLAPLRGWQPHFIGSLHELELGFRAYGRPAL
Ga0137329_10367692	3300012133	Soil	MNVLVLDESLELAGVVGRLAPLRGWQPHFLGSLLELEL
Ga0137399_108399991	3300012203	Vadose Zone Soil	VNVLVLDESLELADVVGRFTLLRGWQPHFIGSLDELELGVRA
Ga0137362_102990501	3300012205	Vadose Zone Soil	VNLLVLDESLDLAVVVGRIAPVRGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPPL
Ga0137378_104404261	3300012210	Vadose Zone Soil	VNLLVLDESLDLAVVVGRIAPVRGWEPHFVGSLHELEQAVQAHGRPALTVVNL
Ga0157291_100279843	3300012902	Soil	MNLLVLDESLELALLIGRIAPLNGWQPHFIGSLHEMELAVQA
Ga0137416_104268443	3300012927	Vadose Zone Soil	VNLLVLDESLDLAMVVGRIAPVRGWEPHFVGSLHELEQAVQAHGRPALTVVNLQP
Ga0153915_122819312	3300012931	Freshwater Wetlands	VNLLVLDESLDLAVVVGRMAPVRGWEPHFVGSLHELELAVRAHG
Ga0126375_105989301	3300012948	Tropical Forest Soil	MNLLVLDESLELASLIGRIAPLRGWQPHFIGSLHEMELAVQAHG
Ga0164299_100123151	3300012958	Soil	VNLLVLDESLDLAMVIGRLAPARGWQPHFVGSLHELEVAVAAQGRPALTV
Ga0164302_105374071	3300012961	Soil	VNLLVLDESLDLAMVIGRLAPARGWQPHFVGSLHELEVAVAAQG
Ga0157373_106717601	3300013100	Corn Rhizosphere	VNVLVLDESLDLAGVVGQLAPLRGWQPHFIGSLHELELGFRAYGRPALVIVNLQAPL
Ga0157371_101742403	3300013102	Corn Rhizosphere	MNLLVLDESLELALLIGRIAPLRGWQPHFIGSLHEMELAVQAHGRPALTVVNLQAPL
Ga0075353_12335312	3300014321	Natural And Restored Wetlands	MNVLVLDESLELAGVVGRLASLRGWEPHFIGSLYELELGVRAYG
Ga0132256_1016979362	3300015372	Arabidopsis Rhizosphere	VNLLVLDESLDLAVVVGRIAPVRGWEPHFVGSLHELEQAV
Ga0187780_100489244	3300017973	Tropical Peatland	VNLLVLDESLELAVNLRNLALLRGWQPHFVGSLHELEVAVAAQGRPGLVVVNL
Ga0187788_102820511	3300018032	Tropical Peatland	MNLLVLDESLDLALLIGRLAPVCGWQPHFVGSLHELELAVQAHGRPAL
Ga0184620_101606841	3300018051	Groundwater Sediment	VNVLVLDESLELADVVGRFTLLRGWQPHFIGSLDELELGVRAYG
Ga0184632_102370981	3300018075	Groundwater Sediment	VNVLVLDESLELAGVVGRLASLRGWQPHFLGSLLELELGVRTYGRPAL
Ga0184612_100188111	3300018078	Groundwater Sediment	MNVLVLDESLELAGVVGRLASLRGWQPHFLGSLLELELGVRTYGRPAL
Ga0184612_103921551	3300018078	Groundwater Sediment	MNVLVLDESLELAGVVGQLAPLRGWQPHFLGSLLELELGVRTYGRP
Ga0190265_111331832	3300018422	Soil	LNLLVLDESLELALLLGRRAPVRGWEPHFIGSLHEL
Ga0190272_129528082	3300018429	Soil	VNVLVLDESLELADVVGRFTLLRGWQPHFIGSLDELELG
Ga0193723_10388113	3300019879	Soil	VNVLVLDESLELADVVGRFTLLRGWQPHFIGSLDELELGV
Ga0193707_10119914	3300019881	Soil	VNVLVLDESLELADVVGRFTLLRGWQPHFIGSLDELELGVR
Ga0193729_11007183	3300019887	Soil	VNLLVLDESLDLAMVVGRIAPVRGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPPL
Ga0210407_102149211	3300020579	Soil	VNLLVLDESLELAVNIRNLALLRGWQPHFVGSLHELELAVGAQGRPGLVVVNLQAPLTAW
Ga0210403_107560841	3300020580	Soil	VNLLVLDESLELAVNIRNLALLRGWQPRFVGSLHELEL
Ga0210399_104204433	3300020581	Soil	VNLLVLDESLELAVNIRNLALLRGWQPHFVGSLHELE
Ga0210382_100775861	3300021080	Groundwater Sediment	VNVLVLDESLELAGVVGRLASLRGWQPHYIGSLHALELGVRAYGRPG
Ga0210404_100471581	3300021088	Soil	VNLLVLDESLELAVNIRNLALLRGWQPHFVGSLHELELAVGAQGRP
Ga0126371_127309061	3300021560	Tropical Forest Soil	VNLLVLDESLEFAGLIGRLAPLRGWQPHFVGSLHE
Ga0242654_101968581	3300022726	Soil	VNLLVLDESLDLAMVVGRIAPVRGWEPHFVGSLHELELAVQAHGRPALT
Ga0247789_11398621	3300023266	Soil	MNLLVLDESLELALLIGRIAPLRGWQPHFIGSLHEMELAVQAHGRPALTVVNLQAP
Ga0207653_100084211	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VNLLVLDESLDLAVVVRRIAPVRGWEPHSVGSLHELEQAVQAHGRPALTVVNLQPPLTA
Ga0207653_103295852	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VNLLVLDESLDLAMVIGRLAPARGWEPHFVGSLHELEVAVAAQGRPALT
Ga0207688_100561821	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VNLLVLDESLDLAMVIGRLAPARGWEPHFVGSLHELEVAVA
Ga0207684_103809771	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VNLLVLDESLELAVLIGRLAPLRGWQPHFVGSLHEVELAVQAHGRPALLVVNLQ
Ga0207654_100361111	3300025911	Corn Rhizosphere	VNLLVLDESLDLAMVIGRLAPARGWEPHFVGSLHELEVAVAAQGRPALTVVN
Ga0207660_110453602	3300025917	Corn Rhizosphere	VNVLVLDESLDLAGVVGQLAPLRGWQPHFIGSLHELELGFRAYGRPA
Ga0207657_1000059136	3300025919	Corn Rhizosphere	VNLLVLDESLDLAMVIGRLAPARGWEPHFVGSLHELEVAVAAQGRPAL
Ga0207649_109380912	3300025920	Corn Rhizosphere	MNLLVLDESLELALLIGRIAPLRGWQPHFIGSLHEMELAVQ
Ga0207640_102954151	3300025981	Corn Rhizosphere	VNLLVLDESLDLAMVIGRLAPARGWEPHFVGSLHELEVAVAAQGRP
Ga0208000_1031032	3300026001	Rice Paddy Soil	MNLLVLDESLELAVMLGRLAPGRGWRPHFVGSLHELELAVRAHG
Ga0257170_10079141	3300026351	Soil	VNLLVLDESLDLAVVVRRIAPVRGWEPHFVGSLHELEQAVQAHGRPAL
Ga0257171_10040051	3300026377	Soil	VNLLVLDESLDLAVVVRRIAPVRGWEPHFVGSLHELEQAVQAHGRPALTVVNL
Ga0257153_10157621	3300026490	Soil	VNLLVLDESLDLAVVVRRIAPVRGWEPHFVGSLHELEQAVQAHGRPALTVVNLQP
Ga0257156_10006441	3300026498	Soil	VNLLVLDESLDLAVVVRRIAPVRGWEPHFVGSLHELEQAVQAHGRPALTV
Ga0257181_10319062	3300026499	Soil	VNVLVLDESLELAGVVGRLAPLRGWQPHFIGSLHELELGFRAYGRPALV
Ga0257168_10208303	3300026514	Soil	VNLLVLDESLDLAVVVRRIAPVRGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPP
Ga0209648_108337411	3300026551	Grasslands Soil	VNLLVLDESLELAVQIGRLASLRGWQPHFVGLLHELE
Ga0209995_10036961	3300027471	Arabidopsis Thaliana Rhizosphere	MNLLVLDESLELALLIGRIAPLRGWQPHFIGSLHEMELAVQAHGRPALT
Ga0209968_10004949	3300027526	Arabidopsis Thaliana Rhizosphere	MNLLVLDESLELALLIGRIAPLRGWQPHFIGSLHEMELAVQAHGRPALTVVNLQA
Ga0209999_10265311	3300027543	Arabidopsis Thaliana Rhizosphere	MNLLVLDESLELALLIGRIAPLNGWQPHFIGSLHEMELAVQAHGRP
Ga0209982_10179751	3300027552	Arabidopsis Thaliana Rhizosphere	MNLLVLDESLELALLIGRIAPLNGWQPHFIGSLHEMELAVQAHGRPALTVVNLQ
Ga0209329_10714721	3300027605	Forest Soil	VNLLVLDESLDLAVVVRRIAPVRGWEPHFVGSLHELEQAVQ
Ga0209998_101055732	3300027717	Arabidopsis Thaliana Rhizosphere	VNLLVLDESLDLAMVIGRLAPARGWEPHFVGSLHELEVAAEEV
Ga0209701_105452132	3300027862	Vadose Zone Soil	VNVLVLDESLELAGVVGRLAPLRGWQPHFIGSLHEL
Ga0209974_1000008231	3300027876	Arabidopsis Thaliana Rhizosphere	MNLLVLDESLELALLIGRIAPLRGWQPHFIGSLHEMELAVQAHGRPALTVVNLQ
Ga0209068_100684981	3300027894	Watersheds	VNLLVLDESLDLAIVVGRIAPVRGWEPHFVGSLHELEQAVQAHGRPALT
Ga0209526_100403945	3300028047	Forest Soil	VNLLVLDESLDLAMVVGRIAPVRGWEPHFVGSLHELEQAVQAHGRAA
Ga0307504_102076312	3300028792	Soil	VNVLVLDESLDLAGVVGRLALLRGWEPHFLGSLLE
(restricted) Ga0255311_11300731	3300031150	Sandy Soil	VNVLVLDESLELAGVVGQLAALRGWQPHFIGSLHELELGVRAY
Ga0308194_101710392	3300031421	Soil	VNLLVLDESLDLAMVVGRIAPVRGWEPHFVGSLHEL
Ga0307469_102322231	3300031720	Hardwood Forest Soil	VNLLVLDESLDLAVVVRRIAPVRGWEPHFVGSLHELEQAVQAHGRPALTVVN
Ga0307468_1000374881	3300031740	Hardwood Forest Soil	MNVLVLDESLELAGVVGRLAPMRGWEPHFLGSLLELELG
Ga0307473_104483522	3300031820	Hardwood Forest Soil	VNLLVLDESLDLAVVVRRIAPVRGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPPLT
Ga0307479_109695331	3300031962	Hardwood Forest Soil	VNLLVLDESLELAVNIRNLALLRGWQPHFVGSLHEL
Ga0307472_1009439211	3300032205	Hardwood Forest Soil	VNLLVLDESLELAVLIGRLAPLRGWQPHFVGSLHE
Ga0335070_112293332	3300032829	Soil	VNLLVLDESLELAVVIGRLAPIRGWQPHFVGSLHELELAVRAHGR
Ga0326726_103397441	3300033433	Peat Soil	VNLLVLDESLDLAVVVGRIAPVRGWEPHFVGSLHELEQAVQAHGRPALTV
Ga0326732_10053541	3300033501	Peat Soil	VNLLVLDESLDLAVVVGRIAPVRGWEPHFVGSLHELE
Ga0316628_1003241993	3300033513	Soil	VNLLVLDESLDLAVVVGRIAPVWGWEPHFVGSLHELELAVQAHGRPALTVVNLQPPLT
Ga0326723_0287752_559_735	3300034090	Peat Soil	VNLLVLDESLDLAVVVGRIAPVRGWEPHFVGSLHELEQAVQAHGRPALTVVNLQPPLTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters