Metagenome / Metatranscriptome Family F081720

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081720
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	97 residues
Representative Sequence	MNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGPDHALPLSSKETERTGTLTAPEKAA
Number of Associated Samples	90
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.81 %
% of genes near scaffold ends (potentially truncated)	35.09 %
% of genes from short scaffolds (< 2000 bps)	89.47 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.807 % of family members)
Environment Ontology (ENVO)	Unclassified (30.702 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.018 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.23% β-sheet: 0.00% Coil/Unstructured: 50.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF01258	zf-dskA_traR	7.02
PF03330	DPBB_1	3.51
PF02653	BPD_transp_2	3.51
PF00313	CSD	2.63
PF06035	Peptidase_C93	1.75
PF07110	EthD	0.88
PF01569	PAP2	0.88
PF07369	DUF1488	0.88
PF14384	BrnA_antitoxin	0.88
PF13594	Obsolete Pfam Family	0.88
PF00009	GTP_EFTU	0.88
PF07045	DUF1330	0.88
PF13458	Peripla_BP_6	0.88
PF00027	cNMP_binding	0.88
PF01522	Polysacc_deac_1	0.88
PF08241	Methyltransf_11	0.88
PF03401	TctC	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	7.02
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	1.75
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.88
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.88
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	99.12 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	97.37 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.53 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	8.77 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.75 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.88 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.02 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.75 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.88 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.77 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.14 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.75 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	0.88 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.77 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.75 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.75 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.88 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.88 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.77 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	1.75 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.75 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.88 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.88 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1062074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10031814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1421	Open in IMG/M
3300000955\|JGI1027J12803_101146777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	709	Open in IMG/M
3300005332\|Ga0066388_100592259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1733	Open in IMG/M
3300005332\|Ga0066388_100630959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1689	Open in IMG/M
3300005332\|Ga0066388_101014348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1392	Open in IMG/M
3300005332\|Ga0066388_101364715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1228	Open in IMG/M
3300005363\|Ga0008090_15190621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300005434\|Ga0070709_10017458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	4117	Open in IMG/M
3300005471\|Ga0070698_101462397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300005764\|Ga0066903_100641992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1853	Open in IMG/M
3300005764\|Ga0066903_100713287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1771	Open in IMG/M
3300005764\|Ga0066903_101031836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1507	Open in IMG/M
3300005764\|Ga0066903_102165956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1071	Open in IMG/M
3300005764\|Ga0066903_104766955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	721	Open in IMG/M
3300006028\|Ga0070717_10011942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	6610	Open in IMG/M
3300006034\|Ga0066656_10499118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	794	Open in IMG/M
3300006038\|Ga0075365_10496695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	862	Open in IMG/M
3300006172\|Ga0075018_10176488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1001	Open in IMG/M
3300006178\|Ga0075367_10723705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300006845\|Ga0075421_102716211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300006871\|Ga0075434_100197240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2033	Open in IMG/M
3300009143\|Ga0099792_10116269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1429	Open in IMG/M
3300009143\|Ga0099792_11042842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300009147\|Ga0114129_10401148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1807	Open in IMG/M
3300009792\|Ga0126374_10740793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	744	Open in IMG/M
3300010043\|Ga0126380_11675217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300010046\|Ga0126384_10620163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	949	Open in IMG/M
3300010046\|Ga0126384_11202128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	699	Open in IMG/M
3300010047\|Ga0126382_10292368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1219	Open in IMG/M
3300010048\|Ga0126373_12575706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300010359\|Ga0126376_11577794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	688	Open in IMG/M
3300010360\|Ga0126372_10167688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1782	Open in IMG/M
3300010366\|Ga0126379_10835812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1021	Open in IMG/M
3300010376\|Ga0126381_100200980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2665	Open in IMG/M
3300010376\|Ga0126381_103374503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300010376\|Ga0126381_104698600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300010397\|Ga0134124_12349326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	574	Open in IMG/M
3300010398\|Ga0126383_10880603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	981	Open in IMG/M
3300010398\|Ga0126383_12708488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300012198\|Ga0137364_11399630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	518	Open in IMG/M
3300012202\|Ga0137363_10088933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2320	Open in IMG/M
3300012202\|Ga0137363_10621899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	912	Open in IMG/M
3300012361\|Ga0137360_10568033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	969	Open in IMG/M
3300012362\|Ga0137361_10846238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	831	Open in IMG/M
3300012362\|Ga0137361_11429700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300012469\|Ga0150984_104576932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300012582\|Ga0137358_10305714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1080	Open in IMG/M
3300012917\|Ga0137395_10810385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	678	Open in IMG/M
3300012961\|Ga0164302_11076759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300012971\|Ga0126369_12721541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300012986\|Ga0164304_10515022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	876	Open in IMG/M
3300012989\|Ga0164305_10680196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	838	Open in IMG/M
3300012989\|Ga0164305_11435815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300016294\|Ga0182041_10866883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	810	Open in IMG/M
3300016357\|Ga0182032_11787575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300016371\|Ga0182034_10379553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1155	Open in IMG/M
3300016371\|Ga0182034_10682518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	872	Open in IMG/M
3300016422\|Ga0182039_10342603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1253	Open in IMG/M
3300016445\|Ga0182038_11480792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300018433\|Ga0066667_10653458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	879	Open in IMG/M
3300018482\|Ga0066669_12324322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300020579\|Ga0210407_10164712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1713	Open in IMG/M
3300020579\|Ga0210407_11317081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	539	Open in IMG/M
3300021178\|Ga0210408_10656108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	828	Open in IMG/M
3300021361\|Ga0213872_10104038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1264	Open in IMG/M
3300021405\|Ga0210387_10304566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1402	Open in IMG/M
3300021478\|Ga0210402_10050690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3629	Open in IMG/M
3300021560\|Ga0126371_10286936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1769	Open in IMG/M
3300021560\|Ga0126371_11234037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	883	Open in IMG/M
3300025898\|Ga0207692_10275743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1016	Open in IMG/M
3300025905\|Ga0207685_10115809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1169	Open in IMG/M
3300025910\|Ga0207684_10559377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	978	Open in IMG/M
3300025939\|Ga0207665_10463224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	974	Open in IMG/M
3300026304\|Ga0209240_1171876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	660	Open in IMG/M
3300026317\|Ga0209154_1283070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300026319\|Ga0209647_1130599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1121	Open in IMG/M
3300026551\|Ga0209648_10033369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4487	Open in IMG/M
3300026557\|Ga0179587_10474908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819	Open in IMG/M
3300027903\|Ga0209488_10088089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2316	Open in IMG/M
3300028875\|Ga0307289_10359310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	599	Open in IMG/M
3300028878\|Ga0307278_10063700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1664	Open in IMG/M
3300029636\|Ga0222749_10499231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	658	Open in IMG/M
3300031093\|Ga0308197_10378973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300031543\|Ga0318516_10188767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1188	Open in IMG/M
3300031545\|Ga0318541_10086717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1663	Open in IMG/M
3300031545\|Ga0318541_10321860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	863	Open in IMG/M
3300031561\|Ga0318528_10057862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1973	Open in IMG/M
3300031564\|Ga0318573_10014130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3461	Open in IMG/M
3300031719\|Ga0306917_10187290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1560	Open in IMG/M
3300031744\|Ga0306918_10679815	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300031744\|Ga0306918_10983028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	656	Open in IMG/M
3300031748\|Ga0318492_10077350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1603	Open in IMG/M
3300031751\|Ga0318494_10090587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1674	Open in IMG/M
3300031778\|Ga0318498_10200797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	904	Open in IMG/M
3300031793\|Ga0318548_10188272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1011	Open in IMG/M
3300031798\|Ga0318523_10017816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3037	Open in IMG/M
3300031833\|Ga0310917_10041704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2773	Open in IMG/M
3300031833\|Ga0310917_10504289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	823	Open in IMG/M
3300031859\|Ga0318527_10059943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1504	Open in IMG/M
3300031879\|Ga0306919_11004811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300031890\|Ga0306925_10969559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	869	Open in IMG/M
3300031890\|Ga0306925_11664897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	617	Open in IMG/M
3300031942\|Ga0310916_10271450	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1432	Open in IMG/M
3300031945\|Ga0310913_10742700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	693	Open in IMG/M
3300032041\|Ga0318549_10036212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1974	Open in IMG/M
3300032059\|Ga0318533_10355891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1066	Open in IMG/M
3300032059\|Ga0318533_10984351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	619	Open in IMG/M
3300032076\|Ga0306924_11056250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	888	Open in IMG/M
3300032090\|Ga0318518_10490524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300032174\|Ga0307470_11110377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	637	Open in IMG/M
3300032261\|Ga0306920_100399770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2043	Open in IMG/M
3300032261\|Ga0306920_101604730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	925	Open in IMG/M
3300033290\|Ga0318519_10665037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.86%
Host-Associated	Host-Associated	6.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.98%
Plants	Host-Associated → Plants	6.14%
Aquatic	Environmental → Aquatic	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.39%
Roots	Host-Associated → Plants → Roots	1.75%
Sediment	Environmental → Aquatic → Sediment	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.95%
Loam	Environmental → Terrestrial → Soil → Loam	14.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.51%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.51%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.88%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.75%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.75%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.88%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.88%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10620741	3300000580	Forest Soil	MNIEDSRIIARFQCLLTESLVAKRLAQWRPELKDALYQMFEELEQRDLKKTPEYRNVMLRADQHAEWLAGLARLSSPDHALPVSSKETERT
AF_2010_repII_A1DRAFT_100318143	3300000597	Forest Soil	MNIEDSRIIARFQCLLTESLVAKRLGQWRPELKDALYQMFEELEQRDLKKTPEYRNVMLRADQHAEWLAGLARLSSPDHALPVSSKETERTGTLTASEKAA*
JGI1027J12803_1011467771	3300000955	Soil	MTIEDSRIIARFQCLLTESLVAKRLGQWRPESKDGLYQMLFEELEQRDLKKTPEYRNVMLRADQHAEWLAGLSRLSSRDHGGKWHYHEVETSIPQD*
Ga0066388_1005922592	3300005332	Tropical Forest Soil	MNIEDSRTIARFQYLLTESLVAKRLGHWRPELKDALYQMMFEELEQRDLKKTPESRNVMLRADQHAEWLAGLARLCNPNHPLPLSPKETERAGTLSALEKAA*
Ga0066388_1006309591	3300005332	Tropical Forest Soil	MNIEDSRIIARFQGLLTESLVAKRLGQWRPELKDALYQMMFEELEQCDLKGTPEYRNVMLRADQHAEWLAGLVRLCDPDHALPISSKEAERAGTLTALEKAA*
Ga0066388_1010143484	3300005332	Tropical Forest Soil	MNIEDSKIIARFQGLLTESLVAKRLGQSRPELKDALYQMMFEELEQRGLKGTPAYRNVMLRADQHAEWLAGLATLCSPDVALLISSKETERAGTLTALEKAA*
Ga0066388_1013647151	3300005332	Tropical Forest Soil	MNIEDSRIIARFQCLLTESLVAKRLGQLRPELKDALYQMRFEELEQRDLKKTPEYRNVMLRADQHAEWLTGLARLCNPNHALPLS
Ga0008090_151906212	3300005363	Tropical Rainforest Soil	MNIEDSRIIARFQGLLTESLVAKRLGQWRPELKDALYQMFEELEQRDLKKTPEYRNVMLRADQHAEWLAGLARLSSPDHALPVSSKETERTGTLTASEKAA*
Ga0070709_100174586	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTIEDSRIIARFQCLLTESLVAKRLGQWRPESKDGLYQMLFEELEQRDLKKTPEYRNVMLRADQHAEWLAGLSRLSSPG*
Ga0070698_1014623972	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNIEDSRIIARFQCLLTESMVAKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETERTGTLTAPEKAA*
Ga0066903_1006419923	3300005764	Tropical Forest Soil	MNIEDSRIIARFQCLLTESMVAKRLGQSRPDSADALYQMLFEELEQCGLKGTPEYRNVMFTADQHAEWLAGLARLSGPDHALPLSSKETERTGTLTAPEKAA*
Ga0066903_1007132873	3300005764	Tropical Forest Soil	MNIEDSRIIARFQGLLTESLVAKRLGQWRPELKDALYQMMFEELEQRGLKGTPAYRNVMLRADQHAEWLAGLARLCSPEHALPISSKETERAGTLTALEKAA*
Ga0066903_1010318361	3300005764	Tropical Forest Soil	MNIEDSRIIARFQCLLTESLVAKRLGQLRPELKDALYQMRFEELEQRDLKKTPEYRNVMLRADQHAEWLTGLARLCNPNHALPLSSREAERVGTVSALEKAA*
Ga0066903_1021659561	3300005764	Tropical Forest Soil	MNIEDSRIIARFQCLLTESLVAKRLGQSRPDFKDALYQMLFELEQRGLKGTPGYRNVMFRADQHAEWLAGLARLSRPDHALPLSSKETERTGTLTAPEKAA*
Ga0066903_1047669552	3300005764	Tropical Forest Soil	MNIEDSRIIARFQCLLTESLVAKRLAQWRPELKDALYQMFEELEQRDLKKTPEYRNVMLRADQHAEWLAGLARLSSPDHALPVSSKETERTGTLTASEKAA*
Ga0070717_100119423	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTIEDSRIIARFQCLLTESLVAKRLGQWRPESKDGLYQMLFEELEQRDLKKTPEYRNVMLRADQHAEWLAGLSRLSNPDHGGKRHFHEVETSIPQD*
Ga0066656_104991182	3300006034	Soil	EGWRSRFGRRSSGGVRMNMDDSRIIARFQCLTTGLMAAKRLGQSRPEVADELYRTWLELEQRGLKKTPEYRTVMLGADRHACWLAGLAKLSSSDLVLPLSSKETERTGTLTAPQEAA*
Ga0075365_104966951	3300006038	Populus Endosphere	LLTESLVAKRLGQWRPGLKDALYQMMFEELEQRDLKKTPEYRDVMLRADQHAEWLAGLARLCNPDHALPLSSTETGRTDTLTAPREAA*
Ga0075018_101764882	3300006172	Watersheds	MNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGPDHALPISSKETERTGTLTAPEKAA*
Ga0075367_107237052	3300006178	Populus Endosphere	MRIEDSRIIARFQGLLTESLVAKRLGQWRPGLKDALYQMMFEELEQRGLKRTPEYRNVMLRADQHAEWLAGLAKLCSPNVALPMSSKETKRAGTLTALQEAA*
Ga0075421_1027162111	3300006845	Populus Rhizosphere	MTIEDSRIIARFQCLLTESLVAKRLGQWRPESKDALYQMLFDELEQRDLKKTPEYRNVMLRADQHAEWLAGLSRLSSPDHGGKRHFHEVETSIPQH*
Ga0075434_1001972403	3300006871	Populus Rhizosphere	MTIEDSRIIARFQCLLTESLVAKRLGQWRPESKDGLYQMLFEELEQRDLKKTPEYRNVMLRADQHAEWLAGVSRLSSPG*
Ga0099792_101162691	3300009143	Vadose Zone Soil	MNIEDSGIIARFQCLLTESLVAKRLGQWRPELKDALYQMMFEELEQRDLKNSPEYRNVMLRADQHAEWLAGLARLCSPDHGLPLSSERTDAPT
Ga0099792_110428421	3300009143	Vadose Zone Soil	MNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGFDHALPISSKETERTGTLTAPEKAA*
Ga0114129_104011482	3300009147	Populus Rhizosphere	MTIEDSRIIARFQCLLTESLVAKRLGQWRPESKDGLYQMLFEELEQRDLKKTPEYRNVMLRADQHAEWLAGLSRLSSPDHGGKRHFHEVETSIPQH*
Ga0126374_107407932	3300009792	Tropical Forest Soil	MNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARFSGPDHALPLSSKETERTGTLTAPEKAA*
Ga0126380_116752171	3300010043	Tropical Forest Soil	MNIEDSRIIARFQGLLTESLVAKRLGQSRPELKDALYQMMFEELERRGLKGTPAYRNVMLRADQHAEWLAGLATLCSPDVALLISSKETERTGTLTASEKAA*
Ga0126384_106201632	3300010046	Tropical Forest Soil	MNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYRMLFEELEQRGLKETPEYRNVMFSADQHAEWLAGLARISVPDHALPLSSKE
Ga0126384_112021282	3300010046	Tropical Forest Soil	LHMNIEDSRIIARFQCLLTESMVAKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALLLSSKETERTGTLTAPEKAA*
Ga0126382_102923681	3300010047	Tropical Forest Soil	MNIEDSRIIARFQCLLTESMVAKRLGQSRLDSTDALYQMLFEELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETERTGTLTAPEKAA*
Ga0126373_125757061	3300010048	Tropical Forest Soil	PMNIEDSRIIARFQCLLTESLVAKRLGQLRPELKDALYQMRFEELEQRDLKKTPEYRNVMLRADQHAEWLTGLARLCNPNHALPLSSREAERVGTVSALEKAA*
Ga0126376_115777941	3300010359	Tropical Forest Soil	MNIEDSRIIARFQCLLTESMVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARISGPDHALPLSSKETERTGTLAASEKAA*
Ga0126372_101676882	3300010360	Tropical Forest Soil	MNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGPDHALPLSSKETERTGTLTAPEKAA*
Ga0126379_108358121	3300010366	Tropical Forest Soil	MNIEDSRTIARFQYLLTESLVAKRLGHWRPELKDALYQMMFEELEQRDLKKTPEYRNVMLRADQHAEWLAGLVTLAAPPVSSTERTDTLDAPQKAALNKAGY
Ga0126381_1002009803	3300010376	Tropical Forest Soil	MNIEDSRIIARFQCLLTESLVAKRLAQWRPELKDALYQMFEELEQRDLKKTPEYRNVMLRADQHAEWLAGLARLSSPDHALPLSSKETERTDTLTASEKAA*
Ga0126381_1033745032	3300010376	Tropical Forest Soil	GLRMNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARISVPDHALPLSSKETERTGTLTAPEKAA*
Ga0126381_1046986001	3300010376	Tropical Forest Soil	MNIEDSKIIARFQCLLTESLVAKRLGQLRPELKDALYQMRFEELEQRDLKKTPEYRNVMLRADQHAEWLTGLARLCNPNHALPLSSREAERVGTVSAL
Ga0134124_123493262	3300010397	Terrestrial Soil	MTIEDSRIIARFQCLLTESLVAKRLGQWRPESKDGLYQMLFEELEQRDLKKTPEYRNVMLGADQHAEWLAGLSRLSSPG*
Ga0126383_108806032	3300010398	Tropical Forest Soil	MNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARISVPDHALPLSSKETERTGTLTAPEKAA*
Ga0126383_127084881	3300010398	Tropical Forest Soil	QCLLTESLVAKRLGQWRPELKDALYQMSFEVLQQRGLKETPEYRDVMLRADQHAEWLAGLTKLSSSDHALPLSSKETERTGTLTAPEKVA*
Ga0137364_113996301	3300012198	Vadose Zone Soil	KRPNSSIDEYWWGVPPMNIEDSRIIARFQGLLTESLVASRLGQWRPELKDALYQMMFEALAQRDLKKTPEYRNVMLRADQHAEWLAGLARLCTPDVALPISSKETERAGTPTALEKAA*
Ga0137363_100889333	3300012202	Vadose Zone Soil	VNIDDSRIIARFQSLLTESLAAKRLGQPRPELIDELYRTSLELEQRDLKKSPEYRNVMLTADQRAEWLAGLARLSR*
Ga0137363_106218991	3300012202	Vadose Zone Soil	MNMEDSRIIARFQRLTTGLMAAKRLGEWRPEQGDELYRTWVELEKRGLKRTPEYRNVMLRADRQAWWLAGLARLSSPDPAPPLSSKSLSENIRRDYKVFGA*
Ga0137360_105680331	3300012361	Vadose Zone Soil	VGPMNVDDSRIIARFQRLLTESLAAKRLGQSRAELIDDLYRTSLQLEQRDLKKSPEYRSVMLRADQQAGWLAGLARLGSPYLASPPSSTSPR*
Ga0137361_108462382	3300012362	Vadose Zone Soil	MNIEDSRIIARFQCLLTESIVAKRLGQSRRDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGFDHALPISSKETERTGTLTAPEKAA*
Ga0137361_114297001	3300012362	Vadose Zone Soil	VGPMNIDDSRIIARFQRLLTESLAAKRLGQSRAELIDDLYRTSLQLEQRDLKKSPEYRSVMLRADQQAGWLAGLARLGSPYLASPPSSTSPR*
Ga0150984_1045769321	3300012469	Avena Fatua Rhizosphere	PMTIEDSRIIARYQCLLTESLVAKRLGQWRPESKDGLYQMLFEELEQRDLKKKTPEYRNVMLRADQHAEWLAGLSRLSSPG*
Ga0137358_103057141	3300012582	Vadose Zone Soil	MNIEDSRIIARFQCLLTESIVAKRLGQSRPDSTDALYQMLFVELEQRGLKETPEYRNVMFSADQHAEWLAGLARLSGFDHALPISSKETERTGTLTAPEKAA*
Ga0137395_108103851	3300012917	Vadose Zone Soil	MNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGFDHALPISSKETEHTAR*
Ga0164302_110767592	3300012961	Soil	MKIEDSRIIARFQCLLTESLVAKRLGQWRPESKDALYQMLFEELGQRDLKKTPEYRNVMLRADQHAEWLAGLSRLSSPDYGGNGIHHEDENEHSARLD*
Ga0126369_127215411	3300012971	Tropical Forest Soil	MNIEDSRIIARFQCLLTESLVAKRLGQSRPDFNDALYQMLFELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGPDHALPLSSKETERTGTLTAPEKAA
Ga0164304_105150222	3300012986	Soil	MTIEDSRIIARFQCLLTESLVAKRLGQWRPESKDALYQMLFEELEQRDLKKTPEYRNVMLRADQHAEWLAGLSRLSSPDYGGNGIHHEDENEHSARLD*
Ga0164305_106801962	3300012989	Soil	MNIEDSRIIARFQCLLTEFLVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGFDHALPISSKETERTGTLTAPEKAA*
Ga0164305_114358151	3300012989	Soil	MNVEDSGIIARFQCLLTESLVAKRLGQWRPELKDALYQMLFKELEQRDLKKTPEYRNEMLRADQHVEWLAGLARLSSPDHGLPVSSTDTERTDTLTAPKKAA*
Ga0182041_108668831	3300016294	Soil	LLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGPDHALPLSSKETERTGTLTAPEKAA
Ga0182032_117875751	3300016357	Soil	MNIEDSRMIARFQCLLTEFLVAKRLGQLRPYSKDALYQMLFEELEQRGLKGTPEYRTVMFGADQHAEWLAGLARLSGPDHALPFSSKETERTGTLTAP
Ga0182034_103795532	3300016371	Soil	MDIEDSRIIARFQCLLTGLMVAKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLAKLSGPDHALPLSSKETERTGTLHAPEKAA
Ga0182034_106825182	3300016371	Soil	MNIEDSRIIARFQCLLTESLVAKRLGQWRPELKDALYQMSFEVLEQRDLKETPEYRNVMLRADQHAEWLAGLTRLSSSDHVLPLSSK
Ga0182039_103426032	3300016422	Soil	MNIEDSRIIARFQCLLTGLMVAKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETE
Ga0182038_114807921	3300016445	Soil	MNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGFDH
Ga0066667_106534581	3300018433	Grasslands Soil	MNMDDSRIIARFQCLTTGLMAAKRLGQSRPEVADELYRTWLELEQRGLKKTPEYRTVMLGADRHACWLAGLAKLSSSDLVLPLSSKETERTGTLTAPQEAA
Ga0066669_123243221	3300018482	Grasslands Soil	MNIEDSRIIARFQCLLTEFPGRETIGTVAESKDALYQMWFEELEQRDLKKTREYPNVMLRADQHAEWLAGSSRLSSPDYDGRRHHHEVETSIPQD
Ga0210407_101647124	3300020579	Soil	MNVEDSGIIARFQCLLTESLVAKRLGQWRPELKDALYQMMFEELEQRDLKNSPEYRNVMLRADQHAEWLAGLARLCSPDHGLLLSSERTDAPTATKKAA
Ga0210407_113170812	3300020579	Soil	QCLLTESLVAKRLGQWRPESKDALYQMLFEELGQRDLKKTPENRNVMLRADQHAEWLAGLSRLSSPDYRGNSIHHEDENEHSARLD
Ga0210408_106561082	3300021178	Soil	MNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGPDHALPISPP
Ga0213872_101040381	3300021361	Rhizosphere	MNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEHRGLKGTPEYRNVMFSADQHAEWLAGLARLSGPDHALPLSSKETERTGTLTAPEKAA
Ga0210387_103045662	3300021405	Soil	MKIEDSRIIARFQCLLTESLVAKRLGQWRPESKDALYQMLFEELGQRDLKKTPEYRNVMLRADQHAEWLAGLSRLSSPDYRSNSIHHEDENEHSARLD
Ga0210402_100506904	3300021478	Soil	MKIEDSRIIARFQCLLTESLVAKRLGQWRPESKDALYQMLFEELGQRDLKKTPEYRNVMLRADQHAEWLAGLSRLSSPDYRGNSIHHEDENEHSARLD
Ga0126371_102869363	3300021560	Tropical Forest Soil	MNIEDSRIIARFQCLLTESLVAKRLAQWRPELKDALYQMFEELEQRDLKKTPEYRNVMLRADQHAEWLAGLARLSSPDHALPVSSKETERTGTLTASEKAA
Ga0126371_112340372	3300021560	Tropical Forest Soil	MNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRDLKKTPEYRNVMLRADQHAEWLAGLAGLSSPDHALPLSSNV
Ga0207692_102757432	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKIEDSRIIARFQCLLTESLVAKRLGQWRPESKDALYQMLFEELGQRDLEKTPEYRNVMLRADQHAEWLAGLSRLSSPDYRGNSIHHEDENEHSARLD
Ga0207685_101158092	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTIEDSRIIARFQCLLTESLVAKRLGQWRPESKDGLYQMLFEELEQRDLKKTPEYRNVMLRADQHAEWLAGLSRLSNPDHGGKRHFHEVETSIPQD
Ga0207684_105593772	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNIEDSRIIARFQCLLTESMVAKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETERTGTLTAPEKAA
Ga0207665_104632243	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VGLLPMKIEDSRIIARFQCLLTESLVAKRLGQWRPESKDALYQMLFEELGQRDLKKTPEYRNVMLRADQHAEWLAGLSRL
Ga0209240_11718761	3300026304	Grasslands Soil	MNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGFDHALPISSKETERTGTLTAPEKAA
Ga0209154_12830702	3300026317	Soil	GDADMSAMGGCGMNTEDSRLIARFQRLTTELLVQKRLGQWHPELVDELYRTWLELEQRGLKKTPEYRTVMLGADRHACWLAGLAKLSSPDLVLPLSSKETERTGTLTAPQEAA
Ga0209647_11305993	3300026319	Grasslands Soil	VNIDDSRIIARFQSLLTESLAAKRLGQPRPELIDELYRTSLELEQRDLKKSPEYRNVMLTADQRAEWLAGLARLSR
Ga0209648_100333691	3300026551	Grasslands Soil	GAAKGSWVLVNIDDSRIIARFQSLLTESLAAKRLGQPRPELIDELYRTSLELEQRDLKKSPEYRNVMLTADQRAEWLAGLARLSR
Ga0179587_104749082	3300026557	Vadose Zone Soil	MNIEDSGIIARFQCLLTESLVAKRLGQWRPELKDALYQMMFEELEQRDLKNSPEYRNVMLRADQHAEWLAGLARLCSPDHGLPLSSVRTDAPTATKKAA
Ga0209488_100880892	3300027903	Vadose Zone Soil	MNIEDSGIIARFQCLLTESLVAKRLGQWRPELKDALYQMMFEELEQRDLKNSPEYRNVMLRADQHAEWLAGLARLCSPDHGLPLSSERTDAPTATKKAA
Ga0307289_103593101	3300028875	Soil	MTIEDSRIIARFQCLLTESLVAKRLRQWRPESKDALYQMLFEELEQRDLKKTPEYRNVMLRADQHAEWLAGLSRLRSPDHGGKRHYHEVETSIPQD
Ga0307278_100637002	3300028878	Soil	MNMADSRMIARFQSLATGFMAAKRLGQSRPELADDLYRTWLELEQRGLKKTPQYRNVMLRADRHAWWLAGLARLSSSDHALPLFSKETECTGTLTAPHKTA
Ga0222749_104992311	3300029636	Soil	IEDSQIIARFQCLLTESLVAKRWGQWRPELKDALYQMMFEELEQRDLKNSPEYRNVMLRADQHAEWLAGLARLCSPDHGLLLSSERTDAPTATKKAA
Ga0308197_103789732	3300031093	Soil	LLPMTIEDSRIIARFQCLLTESLVAKRLRQWRPESKDALYQMLFEELEQRDLKKTPEYRNVMLRADQHAEWLAGLSRLRSPDHGGKRHYHEVETSIPQD
Ga0318516_101887672	3300031543	Soil	MNIEDSRIIARFQCLLTGLMVTKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETERTGTLHAPEKAA
Ga0318541_100867174	3300031545	Soil	MDIEDSRIIARFQCLLTGLMVAKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETERTGTLHAPEKAA
Ga0318541_103218602	3300031545	Soil	MNIEDSRIIARFQCLLTESLVAKRLGQWRPELKDALYQMSFEVLEQRDLKETPEYRNVMLRADQHAEWLAGLTRLSSSDHALPLSSKETERAGTLTAPEKAA
Ga0318528_100578623	3300031561	Soil	MVAKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETERTGTLHAPEKAA
Ga0318573_100141302	3300031564	Soil	MNIEDSRIIARFQCLLTGLMVAKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETERTGTLHAPEKAA
Ga0306917_101872902	3300031719	Soil	MNIEDSRIIARFQCLLTESLVAKRLGQWRPELKDALYQMSFEVLEQRDLKETPEYRNVMLRADQHAEWLAGLTRLSSSDHALPLSSKETERTGTLTAPEKAA
Ga0306918_106798151	3300031744	Soil	GLMVAKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETERTGTLHAPEKAA
Ga0306918_109830282	3300031744	Soil	MNIGDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRTVMFGADQHAEWLAGLARLSGPDHALPFSSKETERTGTLTAPEKAA
Ga0318492_100773501	3300031748	Soil	MNIEDSRIIARFQCLLTGLMVTKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETERTGTLHAPEK
Ga0318494_100905873	3300031751	Soil	MNIEDSRIIARFQCLLTGLMVAKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETERTGTLHAPE
Ga0318498_102007972	3300031778	Soil	MNIEDSRIIARFQCLLTGSMVAKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETERTGTLHAPEKAA
Ga0318548_101882723	3300031793	Soil	AGLMVAKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETERTGTLHAPEKAA
Ga0318523_100178162	3300031798	Soil	MNIEDSRIIARFQCLLAGLMVTKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETERTGTLHAPEKAA
Ga0310917_100417042	3300031833	Soil	MVTKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETERTGTLHAPEKAA
Ga0310917_105042891	3300031833	Soil	VGLPMNIEDSRIIARFQCLLTESLVAKRLGQWRPELKDALYQMSFEVLEQRDLKETPEYRNVMLRADQHAEWLAGLTRLSSSDHALPLSSKETERTGTLTAPEKAA
Ga0318527_100599433	3300031859	Soil	MNIEDSRIIARFQCLLAGLMVAKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETERTGTLHAPEKAA
Ga0306919_110048111	3300031879	Soil	RMNIEDSRIIARFHCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGPDHALPLSSKASVPAR
Ga0306925_109695592	3300031890	Soil	LWRSQSGGGLRMNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGFDHALPISSKETERTGTLTAPEKAA
Ga0306925_116648972	3300031890	Soil	SEISVVVGLPMNIEDSRIIARFQCLLTESLVAKRLGQWRPELKDALYQMSFEVLEQRDLKETPEYRNVMLRADQHAEWLAGLTRLSSSDHALPLSSKETERAGTLTAPEKAA
Ga0310916_102714502	3300031942	Soil	LLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGPDHALPIASKETERTGTLTAPEKAA
Ga0310913_107427001	3300031945	Soil	MNIEDSRIIARFQCLLTESLVAKRLGQWRPELKDALYQMSFEVLEQRDLKETPEYRNVMLRADQHAEWLAGLTRLSSSDH
Ga0318549_100362125	3300032041	Soil	DIEDSRIIARFQCLLTGLMVAKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETERTGTLHAPEKAA
Ga0318533_103558912	3300032059	Soil	MNIEDSRIIARFQCLLTESLVAKRLGQWRPELKDALYQMSFEVLEQRDLKETPEYRNVMLRADQHAEWLAGLTRLSSSDHALPLSSKETERAGTLTAPEK
Ga0318533_109843511	3300032059	Soil	MNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGPDHALPLSSKETERTGTLTAPEKAA
Ga0306924_110562501	3300032076	Soil	SPNWPLEISERGLRMNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGFDHALPISSKETERTGTLTAPEKAA
Ga0318518_104905241	3300032090	Soil	QCLLTGSMVAKRLGQSRPDSTDALYQMLFVELEQRGLKGTPEYRNVMFRVDQHAEWLAGLARLSGPDHALPLSSKETERTGTLHAPEKAA
Ga0307470_111103771	3300032174	Hardwood Forest Soil	MNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGPDHALPISSKETERTGTLTAPEKAA
Ga0306920_1003997701	3300032261	Soil	MNIEDSRMIARFQCLLTEFLVAKRLGQLRPYSKDALYQMLFEELEQRGLKGTPEYRTVMFGADQHAEWLAGLARLSGPDHALPFSSKETERTGTLTAPEKAA
Ga0306920_1016047302	3300032261	Soil	QLTRICAGHNNAHSPPKSPNWPLEISERGLRMNIEDSRIIARFQCLLTESIVAKRLGQSRPDSKDALYQMLFEELEQRGLKGTPEYRNVMFSADQHAEWLAGLARLSGFDHALPISSKETERTGTLTAPEKAA
Ga0318519_106650371	3300033290	Soil	PMNIEDSRIIARFQCLLTESLVAKRLGQWRPELKDALYQMSFEVLEQRDLKETPEYRNVMLRADQHAEWLAGLTRLSSSDHALPLSSKETERAGTLTAPEKAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081720

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences