NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F081709

Metagenome Family F081709

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F081709
Family Type Metagenome
Number of Sequences 114
Average Sequence Length 112 residues
Representative Sequence VSVMFIGLAVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSEKP
Number of Associated Samples 88
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 7.02 %
% of genes near scaffold ends (potentially truncated) 89.47 %
% of genes from short scaffolds (< 2000 bps) 89.47 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(38.596 % of family members)
Environment Ontology (ENVO) Unclassified
(37.719 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(54.386 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.
1A2065W1_110460562
2A10PFW1_100563611
3JGI12635J15846_105655612
4JGI25617J43924_101399431
5Ga0066679_103943531
6Ga0066679_105618702
7Ga0070709_108577822
8Ga0070708_1003299661
9Ga0070707_1006683531
10Ga0070698_1000125881
11Ga0070698_1000837001
12Ga0070698_1000986191
13Ga0070698_1018987121
14Ga0070699_1021343591
15Ga0070697_1018342171
16Ga0070731_102150102
17Ga0066701_107769651
18Ga0066699_103629831
19Ga0066699_110342701
20Ga0066703_107239692
21Ga0066702_104805151
22Ga0075028_1001815581
23Ga0075026_1004792842
24Ga0075018_107240861
25Ga0070716_1007153892
26Ga0079222_109079502
27Ga0066658_107703181
28Ga0066659_112606081
29Ga0066660_101533832
30Ga0066797_13135071
31Ga0075426_109052182
32Ga0075436_1006610212
33Ga0075436_1008009081
34Ga0075436_1009694682
35Ga0075436_1013769511
36Ga0099794_101549662
37Ga0066793_100297752
38Ga0099829_105393292
39Ga0099829_111081301
40Ga0099830_106255851
41Ga0099830_115405831
42Ga0099828_102138841
43Ga0099827_109781662
44Ga0136449_1018349112
45Ga0137392_114458571
46Ga0137392_115749771
47Ga0137391_111683151
48Ga0137393_101004633
49Ga0137389_101638644
50Ga0137389_103833691
51Ga0137388_102183331
52Ga0137388_119441651
53Ga0137382_101623471
54Ga0137399_109546301
55Ga0137362_105782831
56Ga0137381_113188801
57Ga0137376_102085623
58Ga0137379_106947052
59Ga0137377_101513792
60Ga0137377_107387302
61Ga0137387_102772692
62Ga0137385_108027161
63Ga0137361_103142011
64Ga0137361_110799552
65Ga0137397_100703673
66Ga0137395_101542192
67Ga0137395_102330332
68Ga0137396_100072261
69Ga0137396_102613332
70Ga0137396_105637161
71Ga0137396_110636491
72Ga0137394_100504465
73Ga0137419_116823401
74Ga0137416_105652761
75Ga0137416_111056482
76Ga0137407_116089712
77Ga0137410_121315362
78Ga0120179_11214531
79Ga0120158_100579261
80Ga0120125_10769501
81Ga0137411_10712601
82Ga0187825_100257233
83Ga0066667_116237192
84Ga0210399_111150641
85Ga0210384_101204213
86Ga0210410_107627621
87Ga0248483_1372501
88Ga0247667_10781642
89Ga0207684_100306751
90Ga0207646_104449802
91Ga0207664_102723674
92Ga0209880_10195103
93Ga0209647_12450032
94Ga0209131_12261422
95Ga0257170_10450151
96Ga0257180_10155632
97Ga0257181_10108151
98Ga0209059_11279512
99Ga0209059_11943271
100Ga0209648_102164441
101Ga0209648_102501931
102Ga0209648_102784462
103Ga0209648_103884361
104Ga0209625_10341291
105Ga0208981_10492371
106Ga0209283_108681691
107Ga0209283_109221191
108Ga0209590_107213301
109Ga0209069_108784201
110Ga0307477_109196581
111Ga0307479_106072461
112Ga0307470_115270582
113Ga0307471_1005641943
114Ga0307471_1006856761
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 31.90%    β-sheet: 26.72%    Coil/Unstructured: 41.38%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110VSVMFIGLAVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSEKPExtracel.Cytopl.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Freshwater Sediment
Watersheds
Vadose Zone Soil
Surface Soil
Peatlands Soil
Agricultural Soil
Permafrost
Soil
Grasslands Soil
Soil
Hardwood Forest Soil
Soil
Prmafrost Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Agricultural Soil
Populus Rhizosphere
3.5%38.6%4.4%10.5%7.0%7.0%4.4%10.5%4.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A2065W1_1104605623300001537PermafrostAASALWCFVSVLFIGLAVLTPRPFTAVASVLVGVGGISGAVLLGVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGVSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPTGEKR*
A10PFW1_1005636113300001538PermafrostWCFVSVLFIGLVVLTPRPFTSVASVLVGVGGISGAVLLCVRTIRQRTFRQPHPGATVFRAAGNIFGFLLAGVGGFSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPTGEKR*
JGI12635J15846_1056556123300001593Forest SoilASVAVGVGGFSGAVLLSVRTIRQRIFQQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSGEKP*
JGI25617J43924_1013994313300002914Grasslands SoilSVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSTEKP*
Ga0066679_1039435313300005176SoilLTPRPFAAVAAVAVGVGGLGGAVLLSVRTVRQRVFRQPHPGATVFRAVGNVLGFVLAGAGGFSLVDVEQGWVFATLALASMIMLSSGIFASWLLVLQIGVASTEKS*
Ga0066679_1056187023300005176SoilLAVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVERGWVFATLAAACVIMLSSGIFASWLLVLQIGVPSGEKA*
Ga0070709_1085778223300005434Corn, Switchgrass And Miscanthus RhizosphereCFVSVMFIGLAVLTPRPFTAVASVAVGVGGITGAVLLSVRTIRQRIFRQPHPGATLFRAAGNIFGFLLAGAGGLSLIDVEQGWVFATLAAACVIMLSSGVFASWLLVLQIGVPSGEKP*
Ga0070708_10032996613300005445Corn, Switchgrass And Miscanthus RhizosphereGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFVIAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSESH*
Ga0070707_10066835313300005468Corn, Switchgrass And Miscanthus RhizosphereTPRPFTSVASVAVGVGGISGAVLLSARTIRQRIFQQPHPGATVFRAAGNIFGFLLAGLGGLSLIDVEQGWVFATLAVACVIMLSSGIFASWLLVLQIGVPSSEEP*
Ga0070698_10001258813300005471Corn, Switchgrass And Miscanthus RhizosphereIGLAVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGLGGLSLIDVEQGWVFATLAAACVIMLSSGIFASWLLVLQIGVPSGEKP*
Ga0070698_10008370013300005471Corn, Switchgrass And Miscanthus RhizosphereAVGVGGISGAVLLSARTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGISLIDVEHGWVFATLAAACVIMLSSGIFASWLLVLQIGVPSGEKS*
Ga0070698_10009861913300005471Corn, Switchgrass And Miscanthus RhizosphereHQIERTPLLRLRAASALWCFVSVMFIGLAVLTPRPFTSVAAVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNISGFVIAGVGGLSLIDVEQGWVFAALALACVIMLSSGIFASWLLVLQIGVPSSERQRS*
Ga0070698_10189871213300005471Corn, Switchgrass And Miscanthus RhizospherePHQIERTPLLRLRAASALWCFVSVMFIGLAVLTPRPFTSVTSVAVGVGGISGAVLLTVRTIRQRIFRQPHPGATVFRAAGNIFGFVIAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSERH*
Ga0070699_10213435913300005518Corn, Switchgrass And Miscanthus RhizosphereIERTPLLRLRAASALWCFVSVMFIGLAVLTPRPFTSVTSVAVGVGGISGAVLLTVRTIRQRIFRQPHPGATVFRAAGNIFGFVIAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSERH*
Ga0070697_10183421713300005536Corn, Switchgrass And Miscanthus RhizosphereAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGLGGLSLIDVEQGWVFATLAAACVIMLSSGIFASWLLVLQIGVPSGKKP*
Ga0070731_1021501023300005538Surface SoilTSVASAAVGLGGISGAVLLSVRTIRQRIFRQPHPGATVFRATGNTFGFLLAGVGGLSLIDVEQGWVFATLAAACVIMLSSGIFASWLLVLQIGVPSGEKA*
Ga0066701_1077696513300005552SoilWCFVSVMFIGLAVLTPRPFTTVASVAVGVGGFSGAVLLSVRMIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGFSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSERP*
Ga0066699_1036298313300005561SoilLAVLTPRPFTSVASVAVGVGGISGAVLFGVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVVQGWVFATLALACVIMLSSGIFASWLLVLQIGVPTSEKP*
Ga0066699_1103427013300005561SoilCFVSVMFIGLAVLTPRPFTTVASVAVGVGGFSGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGFSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSERA*
Ga0066703_1072396923300005568SoilPRPFAAVAAVAVGVGGLGGAVLLSVRTVRQRVFRQPHPGATVFRAVGNILGFVLAGAGGFSLVDVEQGWVFATLTLASMIMLSSGIFASWLLVLQIGVASTEKS*
Ga0066702_1048051513300005575SoilLRAANALWCFVSVLFIGLAVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGASAFRAVGNIFGFLLAGAGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSEKA*
Ga0075028_10018155813300006050WatershedsSALWCFVSVMFIGLAVLTPRPFTSVASVAVGVGGFSGGVLLAVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFGTLALACVIMLSSGIFASWLLVLQIGVPSSEKP*
Ga0075026_10047928423300006057WatershedsLRLRAASAVWCFVGVMFIGLAVLTPRPFSTVSAVVVGVGGLTGAVLLSARTIRQRIFQQKHPGATVFRAAGNIFGFLLAGVGGFSFIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPPAPKDP*
Ga0075018_1072408613300006172WatershedsHQIERTPLLRLRAASALWCFVSVMFIGLAVLTPRPFTSVASVAVGLGGISGAVLLSVRTIRQRIFRQPHPGATVFRATGNILGFVIAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSGERH*
Ga0070716_10071538923300006173Corn, Switchgrass And Miscanthus RhizosphereMFIGIAVLTPRPFTTLAALVLGVGGLAAAVLLFSRTFRGRIFQQPHPGATVFRAMGNILGFVLAGIGGFSLIDVEQGWVFAMLALACVIMLSSGIFASWLLVLQIGVPQPDKGTESRTN*
Ga0079222_1090795023300006755Agricultural SoilLRLRAASALWCFVSVMFIGLAVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFVLAGAGGLSLIDVEQGWVFATLAAACVIMLSSGIFASWLLVLQIGVPSGEKA*
Ga0066658_1077031813300006794SoilLLRLRAANAVWCFVSVMFIGLAVLTPRPFTTVASVAVGVGGFSGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVVQGWVFATLALACVIMLSSGIFASWLLVLQIGVPTSEKP*
Ga0066659_1126060813300006797SoilPFTSVASVAVGVGGISGAVLLCVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVVQGWVFATLALACVIMLSSGIFASWLLVLQIGVPTSEKP*
Ga0066660_1015338323300006800SoilLLRLRAASALWCFVSVMFLGLAVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGASAFRAIGNIFGFLLAGAGGLSLIDVEQGWVFATLALACVIMLSSGMFASWLLVLQIGVPSSEKA*
Ga0066797_131350713300006864SoilMFIGVAVLTPRPFTTVAAAIMGVGGFAGAVLLSVRTVRQRIFRQPHPGATVFRAAGNIFGFVLAGLVGFSLLDVEQGWVFAMLALACVFMLASGTFASWLLVLQIGVPASDKP*
Ga0075426_1090521823300006903Populus RhizosphereLLRLRAANAVWCFVSVMFIGLAVLTPRPFTSVASVAVGVGGISGAVLLAVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGISLIDVEQGWVFATLAAACVIMLSSGIFASWLLVLQIGVPSGEKS*
Ga0075436_10066102123300006914Populus RhizosphereVLTPRPFTSVASVAVGVGGISGAVLLAVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGISLIDVEQGWVFATLAAACVIMLSSGIFASWLLVLQIGVPSGEKS*
Ga0075436_10080090813300006914Populus RhizosphereRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNVFGFVLAGVGGLSLIDVEQGWVFATLAAACVIMLSSGIFASWLLVLQIGVPSGEKP*
Ga0075436_10096946823300006914Populus RhizosphereVWCFVSVMFIGLAVLTPRPFTSVASVAVGVGGISGAVLLAARTIRQRIFRLPHPGATVFRAAGNIFGFLLAGIGGISLIDVEQGWVFATLAAACVIMLSSGIFASWLLVLQIGVRSGEKS
Ga0075436_10137695113300006914Populus RhizosphereCFVSVMFIGLAVLTPRPFTSVASVAVGVGGISGAVLLAMRTIRQRIFQQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLAAACVIMLSSGIFASWLLVLQIGVPSGEKS*
Ga0099794_1015496623300007265Vadose Zone SoilMFIGLAVLTPRPFTTVASVAVGVGGFSGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGFSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSEKP*
Ga0066793_1002977523300009029Prmafrost SoilLRAASAVWCFVTVMFIGVAVLTPRPFAAVAAAIVGVGGLAGAVLLFARTVRQRIFQQPHPGATVFRAAGNIFGFILAGLGGFSLIDDEQGWVFAMLALASVIMLASGIFASWLLVLQIGVPSAEKRTETRSN*
Ga0099829_1053932923300009038Vadose Zone SoilVSVMFIGLAVLTPRPFTAVASVAVGVGGISGAVLLAVRTIRQRIFQQPHPGATVFRAAGNICGFVLAGVGGLSLIDIERGWVFATLGLACAIMLSSGIFASWLLVLQIGVPSSEKS*
Ga0099829_1110813013300009038Vadose Zone SoilGLGGAVLLSVRTVRQRVFRQPHPGATVFRAVGNILGFVLAGAGGFSLVDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVASTEKS*
Ga0099830_1062558513300009088Vadose Zone SoilGLGGAVLLSVRTVRQRVFRQPHPGATVFRAVGNILGFVLAGAGGFSLVDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGMPLTEKS*
Ga0099830_1154058313300009088Vadose Zone SoilALWCFVSVMFIGLAVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGASVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSEKP*
Ga0099828_1021388413300009089Vadose Zone SoilRTVRQRVFRQPHPGATVFRAVGNILGFVLAGAGGFSLVDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVASTEKS*
Ga0099827_1097816623300009090Vadose Zone SoilLWCFVGVMFIGLAVLTPRPFSTVSAVVVGVGGLTGAVLLFARTIRQRIFQQAHPGATLFRAAGNIFGFVLAGAGGFSFIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVQQSERP
Ga0136449_10183491123300010379Peatlands SoilLLLVRTVRQRIFQQQHPGATVFRAAGNIFGFVLAGVGGFSFIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPATDKRNDVDPSVVHN*
Ga0137392_1144585713300011269Vadose Zone SoilANAVWCFVSVMFIGVAVLTPRPFAAVAAVAVGVGGLGGAVLLSLRTVRQGVFRQPHPGASVFRAVGNILGFVLAGAGGFSLVDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVPSTEKS*
Ga0137392_1157497713300011269Vadose Zone SoilCFVSVMFIGLAVLTPRPFTTVASVAVGVGGFSGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVELGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSEKP*
Ga0137391_1116831513300011270Vadose Zone SoilPHQIERTPLLRLRAASALWCFVSVMFIGLAVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGASVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSEKP*
Ga0137393_1010046333300011271Vadose Zone SoilGVGGLGGAVLLSVRTVRQRVFRQPHPGATVFRAVGNILGFVLAGAGGFSLVDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVPSTEKS*
Ga0137389_1016386443300012096Vadose Zone SoilVLTPRPFTTVASVAVGVGGFSGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGFSLIDVEQGWVFATLGLACVIMLSSGIFASWLLVLQIGVPSGEKA*
Ga0137389_1038336913300012096Vadose Zone SoilRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFQQPHPGATVFRAAGNICGFVLAGVGGLSLIDIERGWVFATLGLACAIMLSSGIFASWLLVLQIGVPSSEKS*
Ga0137388_1021833313300012189Vadose Zone SoilLLSVRTVRQRVFRQPHPGATVFRAVGNILGFVLAGAGGFSLVDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVASTEKS*
Ga0137388_1194416513300012189Vadose Zone SoilVAVGVGGLGGAVLLSVRTVRQRVFRQPHPGATVFRAVGNILGFVLAGAGGFSLVDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVPSTEKS*
Ga0137382_1016234713300012200Vadose Zone SoilIERTPLLRLRAANAVWCFISVMFIGVAVLTPRPFAALAAVAVGVAGLGGAVLLSVRTVRQRVFRQPHPGATVFRAVGNILGFVLAGASGFSLVDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVPSTERSQAGPGSPRAIRAPKNR*
Ga0137399_1095463013300012203Vadose Zone SoilCFVSVMFIGLAVLTPRPFTSVASVAVGAGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLAAACVIMLSSGIFASWLLVLQIGLPSGEKP*
Ga0137362_1057828313300012205Vadose Zone SoilTPLLRLRAANAVWCFVSVMFIGLAVLTPRPFTTVASVAVGVGGFSGAVLLSVRMIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGFSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSERP*
Ga0137381_1131888013300012207Vadose Zone SoilPHQIERTPLLRLRAANAVWCFVSVMFICVAVLTPRPFAAVPAVAVGVGGLGGAVLLSVRTVRQRVFRQPHPGATVSRAVGNILGFVLAGAGGFSLVDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVASTEKS*
Ga0137376_1020856233300012208Vadose Zone SoilMFIGLAVLTPRPFTTVAAVAVGVGGFSGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGFSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSE*
Ga0137379_1069470523300012209Vadose Zone SoilLLRLRAANAVWCFVSVVFIGVAVLTPRPFTAVAAVAVGVGGLGGAVLLSFRTVRQRVFRQPHPGATVFRAVGNILGFVLAGAGGFSLVDVELGWVFATLALASVIMLSSGIFASWLLVLQIGVASTEKS*
Ga0137377_1015137923300012211Vadose Zone SoilVASLAVGVGGLSGAILLSVRTIRQRIFRQPHPGATVLRAAGNIFGFLLAGVGGFSLIDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGLPSREKP*
Ga0137377_1073873023300012211Vadose Zone SoilVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGPSLIDVEQGWVFDTLAAACVIMLSSGIFASWLLVLQTGVPLGEKA*
Ga0137387_1027726923300012349Vadose Zone SoilLLRLRAANAVWCFVSVVFIGIAVLTPRPFAAVAAVAVGVGGLGGAVLLSVRTVRQRVFRQPHPGATVFRAVGNILGFVLAGAGGFSLIDVEQGWVFATLALASVIMLSSGIFDSWLLVLQIGVASTEKS*
Ga0137385_1080271613300012359Vadose Zone SoilRAANAVWCFVSVVFIGVAVLMPRPFTAVAAVAVGVGGLGGAVLLSFRTVRQRVFRQPHPGATVFRAAGNVLGFVLAGAGGFSLVDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVASTEKSNVGPLPPRAIRAPKNR*
Ga0137361_1031420113300012362Vadose Zone SoilSALWCFVSVMFIGLAVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVSGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSGEKR*
Ga0137361_1107995523300012362Vadose Zone SoilVGGLGGAVLLSVRTVRQRVFRQPHPGATVFRAVGNIFGFVLAGAGGFSLIDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVPQTEKS*
Ga0137397_1007036733300012685Vadose Zone SoilVGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGFSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSEKH*
Ga0137395_1015421923300012917Vadose Zone SoilMFIGLAVLTPRPFTTVASVAVGVGGFSGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGFSLIDVEQGWVFATLALAWVIMLSSGIFASWLLVLQIGVPSSEKP*
Ga0137395_1023303323300012917Vadose Zone SoilCFVSVMFIGLAVLTPRPFTSVASVAVGVGGISGAFLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSGEKR*
Ga0137396_1000722613300012918Vadose Zone SoilHQIERTPLLRLRAANAVWCFVSVMFIGVAVLTPRPFAAVAAVAVGVGGLGGAVLLSVRTVRQRVFRQPHPGATVFRAVGNILGFVLAGAGGFSLVDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVPLTEKS*
Ga0137396_1026133323300012918Vadose Zone SoilGFSGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGFSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSGERA*
Ga0137396_1056371613300012918Vadose Zone SoilMFIGLAVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLAAACVIMLSSGIFASWLLVLQIGVPSSEKP*
Ga0137396_1106364913300012918Vadose Zone SoilVWCFVSVMLIGLAVLTPRPFAAVTAAAVGVAGLAGAVLLSVRTIRQRIFREPHPGATVFRAVGNIFGFVLAGAGGFSLIDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGAPSTQKS
Ga0137394_1005044653300012922Vadose Zone SoilVWCFVSVMFIGLAVLTPRPFTTVASVAVGVGGFSGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGFSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSGEKA
Ga0137419_1168234013300012925Vadose Zone SoilAVWCFVSVMLIGLAVLTPRPFAALTAAAVGVGGLAGAVLLSVRTIRQRVFRQPHPGATVFRAVGNILGFVLAGAGGFSLIDVEQGWVFAALALASVIMLSSGIFASWLLVLQIGVPSTQKS*
Ga0137416_1056527613300012927Vadose Zone SoilSVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLAAACVIMLSSGIFASWLLVLQIGLPSGEKP*
Ga0137416_1110564823300012927Vadose Zone SoilATRHAQFGDERGRRGSALWCFVSVMFIGLAVLTPRPFTSVASVAVGVGGISGAVLLSARTIRQRIFRQPHPGATVFRAVGNIFGFLLAGVGGLSLIDVEQGWVFATLAAACVIMLSSGIFASWLLVLQIGVPSGEKA*
Ga0137407_1160897123300012930Vadose Zone SoilFAALAAVAVGVGGLGGAVLLSFRTVRQRVFRQPHPGATVFRAVGNILGFVLAGAGGFSLIDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVPSTEKS*
Ga0137410_1213153623300012944Vadose Zone SoilLSVRTVRQRVFRQPHPGATVFRAVGNILGFVLAGAGGFSLVDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVPPTEKS*
Ga0120179_112145313300013763PermafrostVLLCVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGVSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPTGEKR*
Ga0120158_1005792613300013772PermafrostWCFVSVLFIGLVVLTPRPFTSVASVLVGVGGISGAVLLCVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGFSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPTGEKR*
Ga0120125_107695013300014056PermafrostPLLRLRAASAVWCFVSVMLIGVAVLTPRPFAAMAAAALGVGGLAGAVLLSARTIRQRVFQEPHPGATVFRAVGNILGFVLAGAGGFSLIDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVPLTEKS*
Ga0137411_107126013300015052Vadose Zone SoilHQIERTPLLRLRAANAVWCFVSVMFIGLAVLTPRPFTTVASVAVGVGGFSGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGFSLIDVEQGWVFATLAAACVIMLSSGIFASWLLVLQIGVPSGEKA*
Ga0187825_1002572333300017930Freshwater SedimentVGVLFIGLAVLTPRPFTSVASVAVGVAGISGAVLLSVRTIRQRIFRLPHPGANVFRAVGNIFGFLLAGVGGILLIDVEQGWVFATLAAACVIMLSSGIFASWLLVLQIGVPSSEEP
Ga0066667_1162371923300018433Grasslands SoilGILGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLAAACVIMLSSGIFASWLLVLQIGVPLGEKA
Ga0210399_1111506413300020581SoilPFTSVGAVALGVGGLAGAVLLFMRTVRQRIFQQAHPGATVFRAAGNIFGFVLAGAGGFSLIDVDHGWVFATLGLACVIMLSSGIFASWLLVLQIGVQAAEKR
Ga0210384_1012042133300021432SoilFIGVAVLTPRPFAAVAAAIVGVGGLAGAVLLSARTIRQRVFRQPHPGATVFRAVGNILGFVLAGAGGFLLIDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVPSAEKPVR
Ga0210410_1076276213300021479SoilALSCFVSVMFVGLTVLTPRPFTSVASVAIGVGGFSAGVLLTARTIRQRVFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDTAQGWVFATLALACAIMLSSGIFASWLLVLQIGVPSSEN
Ga0248483_13725013300022691SoilMFIGLAVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFQQPHPGATVFRAAGNIFGFVLACVGGLSLIDVERGWVFATLAAACVIMLSSGIFASWLLVLQIGVPSGQKP
Ga0247667_107816423300024290SoilRTSLLRLRASSAVWCFVSVMFIGVAVLAPRPFAAVAAAIVGVGGLSGAVLLSMRTVRQRIFQQPHPGATVFRAAGNIFGFVLAGAGGFALIDLEQGWVFAMLALACVIMLGSGVFASWLLVLQIGVPSSDRSGH
Ga0207684_1003067513300025910Corn, Switchgrass And Miscanthus RhizosphereSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFVIAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSESH
Ga0207646_1044498023300025922Corn, Switchgrass And Miscanthus RhizosphereVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNVFGFVLAGVGGLSLIDVEQGWVFATLAAACVIMLSSGIFASWLLVLQIGVPSGEKP
Ga0207664_1027236743300025929Agricultural SoilSAAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGIGGLSLIDVEQGWVFATLALACGIMLSSGIFASWLLVLQIGVPSSERH
Ga0209880_101951033300026271SoilGGLAGAVLLFARTVRQRIFQQPHPGATVFRAAGNIFGFILAGLGGFSLIDDEQGWVFAMLALASVIMLASGIFASWLLVLQIGVPSAEKRTETPSN
Ga0209647_124500323300026319Grasslands SoilVAVGVGGLGGAVLLSVRTVRQRVFRQPHPGATVFRAVGNILGFVLAGVGGFSLVDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVPRTEKS
Ga0209131_122614223300026320Grasslands SoilPFSTVSAAAVGVGGLTGAVLLFVRTVRQRIFQQQHPGATVFRAAGNISGFLFAGAGGFSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVSPSEKP
Ga0257170_104501513300026351SoilTSALWCFVSVMFIGLAVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSEKP
Ga0257180_101556323300026354SoilLRLRAASALWCFVSVMFIGLAVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSEKP
Ga0257181_101081513300026499SoilVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSEKP
Ga0209059_112795123300026527SoilLLRLRAASALWCFVSVMFIGLAVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGASAFRAVGNIFGFLLAGAGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSEKA
Ga0209059_119432713300026527SoilRPFTSVASVAVGVGGISGAVLLCVRTIRQRIFRQPHPGATVFRAAGNIFGFVLAGVGGLSLIDVVQGWVFATLALACVIMLSSGIFASWLLVLQIGVPTSEKP
Ga0209648_1021644413300026551Grasslands SoilSGAVLLSVRTVRQRVFRQPHPGATVFRAVGNILGFVLAGAGGFSLVDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVPATEKS
Ga0209648_1025019313300026551Grasslands SoilVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSTEKP
Ga0209648_1027844623300026551Grasslands SoilSALWCFVSVMFIGLAVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSGEER
Ga0209648_1038843613300026551Grasslands SoilRLRAASAVWCFVSVMFIGVAILTPRPFAALAAVIVGVGGLAGAVLLSARTIRQRVFQQPHPGATVFRAVGNILGFVLAAVGGFSLIDVEQGWVFGILALAGVIMLSSGIFASWLLVLQIGVPAGDKAVR
Ga0209625_103412913300027635Forest SoilGAGGFSGAVLLTVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSEKL
Ga0208981_104923713300027669Forest SoilSVVFIGVAVLTPRPFAAVAAVAVGVGGLGGAVLLSFRTVRQRVFRQPHPGATVFRAVGNILGFVLAGVGGFSLVDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVPSGEKA
Ga0209283_1086816913300027875Vadose Zone SoilVSVMFIGVAVLTPRPFAAVAAVAVGVGGLGGAVLLSVRTVRQRVFRQPHPGATVFRAVGNILGFVLAGAGGFSLVDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVASTEKS
Ga0209283_1092211913300027875Vadose Zone SoilVSVMFIGLAVLTPRPFTSVASVAVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSEKP
Ga0209590_1072133013300027882Vadose Zone SoilVMFIGVAVLTPRPFAAVAAVAVGVGGLGGAVLLSVRTVRQRVFRQPHPGATVFRAVGNILGFVLAGAGGFSLVDVEQGWVFATLALASVIMLSSGIFASWLLVLQIGVASTEKF
Ga0209069_1087842013300027915WatershedsPLLRLRASSALWCFVSVMFIGLVVLTPRPFTSVASVAVGVGGISGAVLLSGRTIRQRIFQQPHPGATVFRAAGNILGFLLAGVGGLSLIDLEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSERH
Ga0307477_1091965813300031753Hardwood Forest SoilLRLRAASALWCFVSVMFIGLAVLTPRPFTSVASVAVGVGGISAAVLLSMRTIRQRIFRQPHPGATVFRAAGNIFGFVIAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSERH
Ga0307479_1060724613300031962Hardwood Forest SoilDPHQIERTPLLRLRAASALWCFVSVMFIGLTVLTPRPFTSVAAVAVGVGGISGAVLLSARTIRQRIFGQPHPGATVFRAAGNIFGFVLAGLGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSERH
Ga0307470_1152705823300032174Hardwood Forest SoilVGVGGISGAVLLTVRTIRQRIFRQPHPGATVFRAAGNIFGFLLAGVGGFSLIDVEQGWVFATLALACVIMLSSGVFASWLLVLQIGVPSTEKA
Ga0307471_10056419433300032180Hardwood Forest SoilVLLTMRTIRQRIFRQPHPGATVFRAAGNIFGFVIAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSERH
Ga0307471_10068567613300032180Hardwood Forest SoilVGVGGISGAVLLSVRTIRQRIFRQPHPGATVFRAAGNIFGFVLAGVGGLSLIDVEQGWVFATLALACVIMLSSGIFASWLLVLQIGVPSSERH


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.