Metagenome / Metatranscriptome Family F081696

Overview

Basic Information

• Family ID: F081696
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 114
• Average Sequence Length: 54 residues
• Representative Sequence: IPLLRLDATVVLMPAAITAPSSALAAGNGLAEAVRSINDGAEVLAQLRRNGRR
• Number of Associated Samples: 92
• Number of Associated Scaffolds: 114

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 2.65 %
• % of genes near scaffold ends (potentially truncated): 85.96 %
• % of genes from short scaffolds (< 2000 bps): 92.98 %
• Associated GOLD sequencing projects: 86
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (52.632 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (28.947 % of family members)
• Environment Ontology (ENVO): Unclassified (39.474 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (47.368 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Fibrous
• Signal Peptide: Yes
• Secondary Structure distribution:
  α-helix: 35.80%
  β-sheet: 0.00%
  Coil/Unstructured: 64.20%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF07498	Rho_N	10.53
PF13460	NAD_binding_10	8.77
PF08241	Methyltransf_11	3.51
PF00082	Peptidase_S8	2.63
PF00892	EamA	1.75
PF13671	AAA_33	1.75
PF03631	Virul_fac_BrkB	1.75
PF07883	Cupin_2	1.75
PF00350	Dynamin_N	1.75
PF00587	tRNA-synt_2b	0.88
PF06772	LtrA	0.88
PF01370	Epimerase	0.88
PF13188	PAS_8	0.88
PF03193	RsgA_GTPase	0.88
PF00999	Na_H_Exchanger	0.88
PF07676	PD40	0.88
PF04909	Amidohydro_2	0.88
PF10137	TIR-like	0.88
PF01594	AI-2E_transport	0.88
PF07332	Phage_holin_3_6	0.88
PF13419	HAD_2	0.88
PF03473	MOSC	0.88
PF00174	Oxidored_molyb	0.88
PF05977	MFS_3	0.88
PF00282	Pyridoxal_deC	0.88
PF00034	Cytochrom_C	0.88
PF00741	Gas_vesicle	0.88
PF12688	TPR_5	0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	1.75
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.88
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.88
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.88
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.88
COG1162	Ribosome biogenesis GTPase RsgA	Translation, ribosomal structure and biogenesis [J]	0.88
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.88
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.88
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.88
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.88
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.88
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	0.88
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.88

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.63 %
Unclassified	root	N/A	47.37 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.63 %
Unclassified	root	N/A	47.37 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.63 %
Unclassified	root	N/A	47.37 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.61 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43.86 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21.93 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.88 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.88 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.88 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	10.53 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.63 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.75 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.88 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	0.88 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.88 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.88 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.88 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.53 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.63 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.75 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	0.88 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.88 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.88 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.53 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.63 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	0.88 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.88 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.88 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.88 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.53 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.63 %
unclassified Geodermatophilus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → unclassified Geodermatophilus	0.88 %
Nocardioides gansuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides gansuensis	0.88 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	0.88 %
unclassified Gaiella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella	0.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.88 %

Level 11

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.37 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.53 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.63 %
Gaiella sp. SCGC AG-212-M14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	0.88 %
Micromonospora sp. MW-13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. MW-13	0.88 %
Geodermatophilus sp. TF02-6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → unclassified Geodermatophilus → Geodermatophilus sp. TF02-6	0.88 %
Nocardioides gansuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides gansuensis	0.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.88 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.88 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2124908045|KansclcFeb2_ConsensusfromContig62496	Not Available	1151
3300000033|ICChiseqgaiiDRAFT_c0521457	Not Available	506
3300000363|ICChiseqgaiiFebDRAFT_13210592	Not Available	561
3300000955|JGI1027J12803_107791322	Not Available	625
3300000956|JGI10216J12902_103278717	Not Available	639
3300000956|JGI10216J12902_104709246	Not Available	544
3300000956|JGI10216J12902_105112533	Not Available	559
3300000956|JGI10216J12902_109681455	Not Available	549
3300000956|JGI10216J12902_111811039	Not Available	726
3300000956|JGI10216J12902_116079725	Not Available	727
3300004114|Ga0062593_102550316	Not Available	580
3300004480|Ga0062592_100955713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. MW-13	778
3300005334|Ga0068869_100463540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1052
3300005353|Ga0070669_100887738	Not Available	761
3300005435|Ga0070714_100283693	Not Available	1539
3300005435|Ga0070714_101027499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	802
3300005437|Ga0070710_10112004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1640
3300005437|Ga0070710_10518457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	818
3300005440|Ga0070705_101939881	Not Available	502
3300005456|Ga0070678_101503617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630
3300005544|Ga0070686_100568117	Not Available	889
3300005614|Ga0068856_101953171	Not Available	597
3300005841|Ga0068863_101368082	Not Available	715
3300006058|Ga0075432_10029764	All Organisms → cellular organisms → Bacteria	1886
3300006173|Ga0070716_100210339	All Organisms → cellular organisms → Bacteria	1299
3300006196|Ga0075422_10171626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	877
3300006196|Ga0075422_10611343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506
3300006844|Ga0075428_100427352	Not Available	1419
3300006844|Ga0075428_102182937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	571
3300006880|Ga0075429_101312830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	631
3300009094|Ga0111539_10340631	Not Available	1745
3300009100|Ga0075418_11826733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661
3300009148|Ga0105243_10050989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3271
3300009174|Ga0105241_10019165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5045
3300009176|Ga0105242_10180123	Not Available	1864
3300009553|Ga0105249_10018871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6145
3300009840|Ga0126313_10371234	Not Available	1131
3300009840|Ga0126313_10951535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	702
3300010037|Ga0126304_10117212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides gansuensis	1698
3300010038|Ga0126315_10030500	Not Available	2802
3300010038|Ga0126315_10202646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1196
3300010041|Ga0126312_10431482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	939
3300010041|Ga0126312_11155223	Not Available	570
3300010044|Ga0126310_10766742	Not Available	738
3300010145|Ga0126321_1220081	Not Available	1349
3300010145|Ga0126321_1437040	Not Available	1513
3300010166|Ga0126306_11193341	Not Available	625
3300010166|Ga0126306_11625461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538
3300010375|Ga0105239_10119923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2920
3300010999|Ga0138505_100001456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2038
3300012892|Ga0157294_10064850	Not Available	864
3300012896|Ga0157303_10015483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1218
3300012897|Ga0157285_10055893	Not Available	977
3300012960|Ga0164301_11275782	Not Available	594
3300013297|Ga0157378_11139385	Not Available	818
3300014326|Ga0157380_12403801	Not Available	592
3300017792|Ga0163161_10822819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	782
3300017997|Ga0184610_1139735	Not Available	790
3300018054|Ga0184621_10115072	Not Available	959
3300018081|Ga0184625_10314253	Not Available	817
3300018081|Ga0184625_10592636	Not Available	545
3300018422|Ga0190265_10721228	All Organisms → cellular organisms → Bacteria	1119
3300018469|Ga0190270_10524321	Not Available	1135
3300019361|Ga0173482_10314028	Not Available	695
3300019867|Ga0193704_1098853	Not Available	512
3300021445|Ga0182009_10070388	Not Available	1534
3300022756|Ga0222622_10085906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1895
3300022756|Ga0222622_10838534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672
3300022886|Ga0247746_1142915	Not Available	606
3300024181|Ga0247693_1016892	Not Available	954
3300024219|Ga0247665_1027914	Not Available	728
3300025885|Ga0207653_10103103	Not Available	1011
3300025899|Ga0207642_10154207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1226
3300025911|Ga0207654_11282827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534
3300025913|Ga0207695_11748766	Not Available	503
3300025928|Ga0207700_10058509	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2911
3300025934|Ga0207686_10289408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1212
3300025938|Ga0207704_10183667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1514
3300025939|Ga0207665_11317468	Not Available	576
3300025942|Ga0207689_10761061	All Organisms → cellular organisms → Bacteria	817
3300025972|Ga0207668_11040068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733
3300026075|Ga0207708_11314954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	633
3300027483|Ga0207637_1003216	Not Available	822
3300028380|Ga0268265_10851395	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	892
3300028710|Ga0307322_10046321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1054
3300028714|Ga0307309_10058062	Not Available	856
3300028716|Ga0307311_10036997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1271
3300028718|Ga0307307_10022328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1757
3300028721|Ga0307315_10117189	Not Available	793
3300028722|Ga0307319_10079427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1042
3300028722|Ga0307319_10135307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	796
3300028784|Ga0307282_10352766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711
3300028791|Ga0307290_10083623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1161
3300028799|Ga0307284_10061199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1345
3300028814|Ga0307302_10315486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769
3300028814|Ga0307302_10437742	All Organisms → cellular organisms → Bacteria	647
3300028824|Ga0307310_10103936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1267
3300028824|Ga0307310_10132615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1136
3300028828|Ga0307312_10891680	Not Available	589
3300028872|Ga0307314_10077075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	879
3300028875|Ga0307289_10130317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1032
3300028880|Ga0307300_10109678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	840
3300028881|Ga0307277_10072853	All Organisms → cellular organisms → Bacteria	1427
3300028885|Ga0307304_10356469	All Organisms → cellular organisms → Bacteria	654
3300030336|Ga0247826_11171071	Not Available	616
3300030830|Ga0308205_1006108	Not Available	1117
3300031092|Ga0308204_10229978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → unclassified Geodermatophilus → Geodermatophilus sp. TF02-6	592
3300031229|Ga0299913_10415044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1333
3300031716|Ga0310813_10155652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1843
3300031716|Ga0310813_12122203	Not Available	531
3300031943|Ga0310885_10696432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570
3300032126|Ga0307415_100433152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	1132
3300032126|Ga0307415_100684052	All Organisms → cellular organisms → Bacteria → Terrabacteria group	924

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.81%
Host-Associated	Host-Associated	27.19%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.79%
Plants	Host-Associated → Plants	27.19%
Aquatic	Environmental → Aquatic	7.02%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.89%
Sediment	Environmental → Aquatic → Sediment	5.26%
Freshwater	Environmental → Aquatic → Freshwater	1.75%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.88%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.54%
Loam	Environmental → Terrestrial → Soil → Loam	9.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.26%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.88%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.88%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.51%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.75%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.88%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.88%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	28.95%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	8.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.02%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.02%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.51%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.51%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.63%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.88%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental
3300027483	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A1-12 (SPAdes)	Environmental
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_07484610	2124908045	Soil	LVQASVPARLIGIPILRLDAAVVLMPATTTVSSVAVAGDGLTEAVRSINEGEEILTQLRRNARR
ICChiseqgaiiDRAFT_05214572	3300000033	Soil	PAAITVPSSALAXGNGLAEAVRNINDGAEVLAQVRQNGRR*
ICChiseqgaiiFebDRAFT_132105921	3300000363	Soil	PRPALAAGDGLAEAVRSINDGAEVLAQVRRNDGR*
JGI1027J12803_1077913221	3300000955	Soil	RLDATIALMPAALTPSSFAVAAGDGLAEAVRSINEGAEILAQVRREGRR*
JGI10216J12902_1032787172	3300000956	Soil	RARLLGIPLLRLDATIVLMPAAITASSSAFASGNGLAEAVRSINDGAEVLDQLRRNGRP*
JGI10216J12902_1047092461	3300000956	Soil	ASVRARLLGIPLLRLDATVVLMPAAISASSSTVAVEDGLAEAVRSINDGAAILAQVRRDGRR*
JGI10216J12902_1051125331	3300000956	Soil	LSEGALVQASVRARLLGIPLLRLDATVVLMPAAITTPSSALAAGEGLAEAVRSINDGAEMLAQVRNGRR*
JGI10216J12902_1096814551	3300000956	Soil	VQASVRARLLGIPLLRLDATIMLMPTAITASSSTVAAGNGLAEAVRSINDGAEVLAQLRLNGRR*
JGI10216J12902_1118110393	3300000956	Soil	RARLLGIPLLRLDATIALMPAAITASSSGFASGNGLAEAVRSINDGAELLDQLRRNGRR*
JGI10216J12902_1160797252	3300000956	Soil	TVVLMPAAITAASSALAVGNGLAEAVRSINDAAEVLAQVRLYSRR*
Ga0062593_1025503161	3300004114	Soil	SRHLSEGALVQASVRARLLGIPLLRLDATVVLMPATITAPSSALAAGNGLAEAVHSINEGAEVLAQLRRNGRR*
Ga0062592_1009557132	3300004480	Soil	VLMPAAVTTPSTSLAAGDGLAEAVRSINDGAEMLAQVRRNGRR*
Ga0068869_1004635401	3300005334	Miscanthus Rhizosphere	RHLSEGALVQASVRARLLGIPLLRLDATVVLMPATITAPSSALAAGNGLAEAVRSINDGAEVLAQLRRNGGR*
Ga0070669_1008877382	3300005353	Switchgrass Rhizosphere	ARLLGIPLLRLDATVVLMPAAITAPSSALAAGNGLAEAVRSINDGAEVLAQLRRNGRR*
Ga0070714_1002836931	3300005435	Agricultural Soil	LDATVVLMPATITARSSALAGGNGLAEAVRSINDGAEVLAKVRRNSRR*
Ga0070714_1010274993	3300005435	Agricultural Soil	LDATVVLMPATITARSSALAGGNGLAEAVRSINDGAEVLAQVRRNSRR*
Ga0070710_101120041	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LRLDATVVLMPATITARSSALAGGNGLAEAVRSINDGAEVLAQVRRNSRR*
Ga0070710_105184571	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	RLDATVVLMPATITARSSALAGGNGLAEAVRSINDGAEVLAQVRRNSRR*
Ga0070705_1019398811	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RARLLGIPLLRLDATVVLMPAAITAPSSELAGGNGLAEAVRSINDGAEVLAEVRRNGRR*
Ga0070678_1015036173	3300005456	Miscanthus Rhizosphere	LLRLDATVVLMPATITAPSSALAVGNGLAEAVHSINEGAEVLAQLRRNGRR*
Ga0070686_1005681171	3300005544	Switchgrass Rhizosphere	DATVVLMPATITARSSALAGGNGLAEAVRSINDGAEVLAKVRRNSRR*
Ga0068856_1019531711	3300005614	Corn Rhizosphere	LFGIPLLRLEATVVLMPAAITARSSAVVVGDGLAEAVSSINDGAEVLAQVRRNNRR*
Ga0068863_1013680821	3300005841	Switchgrass Rhizosphere	LSEGGLVQASVRARLFGIPLLRLEATVVLMPAAITARSSAVVVGDGLAEAVSSINDGAEVLAQVRRNNRR*
Ga0075432_100297641	3300006058	Populus Rhizosphere	SEGGLVQASVRARLFGIPLLRLDATIALMPGAVTPSSSAVATGDGLAEAVRSINEGAEILAQVRREGRR*
Ga0070716_1002103391	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	TARSSALAGGNGLAEAVRSINDGAEVLAQVRRNSRR*
Ga0075422_101716261	3300006196	Populus Rhizosphere	IPLLRLDATIALMPAALTPSSSAVAAGDGLAEAVRSINEGAEILAQVRREGRR*
Ga0075422_106113431	3300006196	Populus Rhizosphere	RRLSEGALVQASVRARLLGIPLLRLDATIALMPAAITAPSSTLGEGNGLAEAVRSINDGAEVLAQVRNGRR*
Ga0075428_1004273523	3300006844	Populus Rhizosphere	LGIPLLRLDATIALMPAALTPSSSAVAGGDGLAEAVRSINEGAEILAQVRREGRR*
Ga0075428_1021829371	3300006844	Populus Rhizosphere	SVRARLLGIPLLRLDATIALMPAAITAPSSTLGEGNGLAEAVRSINDGAEVLAQVRNGRR
Ga0075429_1013128301	3300006880	Populus Rhizosphere	GLVQASVRARLLGIPLLRLDATIALMPAALTPSSSAVAAGDGLAEAVRSINEGAEILAQVRREGRR*
Ga0111539_103406314	3300009094	Populus Rhizosphere	LRLDATIALMPAALTPSSSAVAAGDGLAEAVRSINEGAEILAQVRREGRR*
Ga0075418_118267331	3300009100	Populus Rhizosphere	ASVRARLLGIPLLRLEATIALMPAAITAPSSVLAEGNGLADAVRSINDGAEMLAQVRRNGRR*
Ga0105243_100509893	3300009148	Miscanthus Rhizosphere	MPAAITAPSSALAAGNGLAEAVRSINDGAEVLAQLRRNGRR*
Ga0105241_100191651	3300009174	Corn Rhizosphere	RLDATVVLMPATITARSSALAGGNGLAEAVRSINDGAEVLAKVRRNSRR*
Ga0105242_101801231	3300009176	Miscanthus Rhizosphere	MPAAITAPSSALAGGNGLAEAVRSINDGAEVLAEVRRNGRR*
Ga0105249_100188712	3300009553	Switchgrass Rhizosphere	LRLDATVALMPAAITAPSSALGAGNGLAEAVRSINDGAEVLAQVRRNGRR*
Ga0126313_103712343	3300009840	Serpentine Soil	LRLDATVVLMPAAITAPSSALSAGNGLAEAVRAINDGAEVLAQVRRNGHR*
Ga0126313_109515351	3300009840	Serpentine Soil	PSSALAAGNGLAEAVRSINDGAEVLAQVRRNGRR*
Ga0126304_101172123	3300010037	Serpentine Soil	SPSPLGAGKGLADAVRCINDGADVLAGVQRNNGH*
Ga0126315_100305004	3300010038	Serpentine Soil	VRARLLGIPLLRLDATVVLMPAAITAPSSALAAGNGLAEAVRSINDGAEVLARVRRNGRR
Ga0126315_102026461	3300010038	Serpentine Soil	RLDATVVLMPAAITAPSSALSAGNGLAEAVRAINDGAEVLARVRRNGRR*
Ga0126312_104314822	3300010041	Serpentine Soil	RLSEGGLVQASVRARLLGIPLLRLDATVVLMPAAITAPSTALAAGNGLAEAVRSINDGAEVLAQVRRNSRR*
Ga0126312_111552231	3300010041	Serpentine Soil	MPAAITAPSSALAAGNGLAEAVRSINDGAEVLAQVRRNGRR*
Ga0126310_107667423	3300010044	Serpentine Soil	MPAAITAPSSALAAGNGLAEAVRSINDGAEVLAQVRRPVRPKLD*
Ga0126321_12200813	3300010145	Soil	VRARLLGLPLLRLDATVALMPAAITPSSTALAGGNGLAEAVRSINDGAEILTEVRRRRMTPISADRRGG*
Ga0126321_14370403	3300010145	Soil	MRRLSEGGLVQASVRARLLGIPLLRLDATIAVMPAELTPSSSAVAAGDGLADAVRSINEGAEILARVRDGRR*
Ga0126306_111933412	3300010166	Serpentine Soil	LRLDATVVLMPAAITAPSSALSAGNGLAEAVRAINDGAEVLARVRRNGRR*
Ga0126306_116254611	3300010166	Serpentine Soil	MPAAITASSSTFAAGEGLADAVRRINDGAEVLAQMRRNGRR*
Ga0105239_101199236	3300010375	Corn Rhizosphere	PSSALAGGNGLAEAVRSINDGAEVLAEVRRNGRR*
Ga0138505_1000014561	3300010999	Soil	RARLLGIPLLRLDTTVALIPAAITASSSALAAGNGLADAVRSINDGAEVLAQVRRNGRR*
Ga0157294_100648501	3300012892	Soil	VQASARARRLGIPLLRLDATVVLMPAAITAPSSTLAARNGLAEAVRSINDAAEVLAQSRNNGR*
Ga0157303_100154831	3300012896	Soil	LLRLDATVVLMPAAITAPSSTLAARNGLAEAVRSINDAAEVLAQSRNNGR*
Ga0157285_100558931	3300012897	Soil	LRLDATVVLMPAAITAPSSTLAARNGLAEAVRSINDAAEVLAQSRNNGR*
Ga0164301_112757821	3300012960	Soil	DATVVLMPTAIRAPSLPAGNGLAEAVRSINDGTEVLANVRRNRRR*
Ga0157378_111393853	3300013297	Miscanthus Rhizosphere	LRLDATVALMPAAITAPSSALAGGNGLAEAVRSINDGAEVLAEVRRNGRNGRR*
Ga0157380_124038011	3300014326	Switchgrass Rhizosphere	MPAAITAPSSALGAGNGLAEAVRSINDGAEVLAQVRRNGR
Ga0163161_108228192	3300017792	Switchgrass Rhizosphere	ARLLGIPLLRLDATVALMPAAITAPSSALGAGNGLAEAVRSINDGAEVLAQVRRNGRR
Ga0184610_11397352	3300017997	Groundwater Sediment	MPAAITARSSALAAGNGLAEAVRSINDGAEVLAELRRNGRR
Ga0184621_101150723	3300018054	Groundwater Sediment	MPAAITAPSSALAAGKGLAEAVRSINDGAEVLAQVRRNGRR
Ga0184625_103142531	3300018081	Groundwater Sediment	RLSEGALVQASVRARLLGIPLLRLDATVVLMPAAITRPSSALAARDGLADAVRSINDGAEILAEVRRNGRR
Ga0184625_105926362	3300018081	Groundwater Sediment	LRLDATIALMPAAITAPSSARGAGNGLAEAVRSINDGAEILAEVRRNGRR
Ga0190265_107212282	3300018422	Soil	LSEGALVQASVRARLLGIPLLRLDATVVLMPTAITTRSSPLAAGDGLAEAVRSINDGAEMLAQVRRNGRR
Ga0190270_105243211	3300018469	Soil	VLMPAAITRPSSALAAGDGLAEAVRSINDGAEILAEVRRNGRR
Ga0173482_103140281	3300019361	Soil	PGRRLSEGALVQASVRARLLGIPLLRLDATVVLMPAAITAPSSTLAARNGLAEAVRSINDAAEVLAQSRNNGR
Ga0193704_10988531	3300019867	Soil	PAAITASSSALAAGNGLAEAVRSINDGAEVLAHVRRNGQR
Ga0182009_100703883	3300021445	Soil	GRRLAEGSLVQASVRARLLGIPLLRLDATVLLAPATITPSSSAPIGGGNSLTEAVRNINEGAEILAQVRRDGRRA
Ga0222622_100859061	3300022756	Groundwater Sediment	LLRLDATIALMPAAITTPSSRLAAGEGLAEAVRSINDGAETLALVRNGRH
Ga0222622_108385341	3300022756	Groundwater Sediment	RRLSEGALVQASVRARLLGIPLLRLDATVALMPAAITAPSSALAAGNGLAEAVRSINEGEEVLAHVRRQNSRRKSS
Ga0247746_11429151	3300022886	Soil	GRRLSEGALVQASVRARLLGIPLLRLDATVVLMPAAITAPSSTLAARNGLAEAVRSINDAAEVLAQSRNNGR
Ga0247693_10168921	3300024181	Soil	SDGALVQASVRARLLGIPLLRLDATVVLMPAAITAPSSALAVGNGLAEAVRSINDGAEVLAQVRRHSRR
Ga0247665_10279141	3300024219	Soil	RARLLGLPLLRLDATVVLMPATITARSSALAGGNGLAEAVRSINDGAEVLAKVRRNSRR
Ga0207653_101031031	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	RHLSEGALVQASVRARLLGIPLLRLDATVVLMPAAITAPSSALAAGNGLAEAVRSINDGAEVLAQLRRNGRR
Ga0207642_101542071	3300025899	Miscanthus Rhizosphere	TAPSSALGAGNGLAEAVRSINDGAEVLAQVRRNGRR
Ga0207654_112828271	3300025911	Corn Rhizosphere	MPATITARSSALAGGNGLAEAVRSINDGAEVLAQVRRNSRR
Ga0207695_117487661	3300025913	Corn Rhizosphere	APSSALAGGNGLAEAVRSINDGAEVLAEVRRNGRR
Ga0207700_100585093	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	ATVVLMPATITARSSALAGGNGLAEAVRSINDGAEVLAKVRRNSRR
Ga0207686_102894083	3300025934	Miscanthus Rhizosphere	VLMPAAITAPSSALAGGNGLAEAVRSINDGAEVLAEVRRNGRR
Ga0207704_101836672	3300025938	Miscanthus Rhizosphere	IPLLRLDATVVLMPAAITAPSSALAAGNGLAEAVRSINDGAEVLAQLRRNGRR
Ga0207665_113174682	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	DPSRHLSEGALVQASVRARLLGIPLLRLDATVVLMPAAITAPSSALAAGNGLAEAVRSINDGAEVLAQLRRNGRR
Ga0207689_107610612	3300025942	Miscanthus Rhizosphere	MPAAITAPSSALAAGNGLAEAVRSINDGAEVLAQLRRNGRR
Ga0207668_110400681	3300025972	Switchgrass Rhizosphere	GIPLLRLDATIALMPGAVTPSSSAVATGDGLAEAVRSINEGAEILAQVRRNGRR
Ga0207708_113149541	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	GIPLLRLDATVVLMPAAITAPSSALAAGNGLAEAVRSINDGAEVLAEVRRNGRR
Ga0207637_10032162	3300027483	Soil	IPLLRLDATVVLMPAAITAPSSTLAARNGLAEAVRSINDAAEVLAQSRNNGR
Ga0268265_108513951	3300028380	Switchgrass Rhizosphere	APSSELAGGNGLAEAVRSINDGAEVLAEVRRNGRR
Ga0307322_100463211	3300028710	Soil	RLLGIPLLRLDATVVLMPAAITARSSALAAGNGLAEAVRSINDGAEVLAELRRNGRR
Ga0307309_100580621	3300028714	Soil	VALMPAPITARSSALAAGNGLAEAVRSINDGAEVLAELRRNGRR
Ga0307311_100369972	3300028716	Soil	LRLDATVVLMPAAITAPSSALAAGNGLAEAVRSINDGAEVLAELRRNGRR
Ga0307307_100223283	3300028718	Soil	RRLSEGGLVQASVRARLLGIPLLRLDATIALMPAAITAPSSGLATGNGLVEAVRSINEGAEVLAQVRRNGRR
Ga0307315_101171892	3300028721	Soil	SEGALVQASVRARLLGIPLLRLDATVVLMPAAITAPSSALAAGNGLAEAVRSINDGAEVLAQLRRNGRR
Ga0307319_100794271	3300028722	Soil	LRLDATVVLMPAAITAPSSALAAGNGLAEAVHSINDGAEVLAKMRRNGQR
Ga0307319_101353071	3300028722	Soil	LMPAAITARSSALAAGNGLAEAVRSINDGAEVLAELRRNGRR
Ga0307282_103527661	3300028784	Soil	DPSRHLSEGALVQASVRARLLGIPLLRLDATVVLMPAAITAPSSALAAGNGLAEAVRSINDGAEVLAQVRRNGRR
Ga0307290_100836231	3300028791	Soil	LDPTRRLSEGALVQASVRARLLGIPLLRLDATVVLMPAAITAPSSALAVGNGLAEAVRSINDGAEVLAQVRRSSRR
Ga0307284_100611993	3300028799	Soil	LRLDASVVLMPAAITAPSSALAAGNGLAEAVRSINDGAEVLAQVRRNGRH
Ga0307302_103154861	3300028814	Soil	VVLMPAAITAPSSPLAVGNGLAEAVRSINDGAEVLAQVRRNSRR
Ga0307302_104377421	3300028814	Soil	DATLVLMPAAISASSSTVAVGDGLAEAVRSINDGAAILAQVRRDGAQDDFKR
Ga0307310_101039361	3300028824	Soil	RLSEGGLVQASVRARLLGIPLLRLDATIALMPAAITAPSSGLATGNGLVEAVRSINEGAEVLAQVRRNGRR
Ga0307310_101326152	3300028824	Soil	RLDATVVLMPAAITAPSSALAAENGLAEAVRSINDGAEVLAQVRRNGRQ
Ga0307312_108916801	3300028828	Soil	LLRLDATVVLMPAAITAPSSAFAAGNGLADAVRSINDGAEVLAQVRRNGRR
Ga0307314_100770751	3300028872	Soil	RLDATVVLMPAAITASSSALAAGNGLAEAVRSINDGAEVLAQVRRNGQR
Ga0307289_101303172	3300028875	Soil	PSRRLSEGGLVQASIRARLLGIPLLRLDATIALMPAAITAPSSGLATGNGLVEAVRSINEGAEVLAQVRRNGRR
Ga0307300_101096782	3300028880	Soil	NRRLSEGALVQASVRARLLGIPLLRLDATVVLMPAAITAPSSALAAGNGLAEAVHSINDGAEVLAQMRRNGQR
Ga0307277_100728532	3300028881	Soil	LVLMPAAISASSSTVAVGDGLAEAVRSINDGAAILAQVRRDGAQDDFKR
Ga0307304_103564692	3300028885	Soil	PLLRLDATLVLMPAAISASSSTVAVGDGLAEAVRSINDGAAILAQVRRDGAQDDFKR
Ga0247826_111710711	3300030336	Soil	GALVQTSVRARLLGIPLLRLDATVVLMPAAITAPSSTLAARNGLAEAVRSINDAAEVLAQARNNGR
Ga0308205_10061083	3300030830	Soil	LRLDATVVLMPAAVTAPSSALATGNGLAEAVRSINDGAEVLAQVRRNGRR
Ga0308204_100207211	3300031092	Soil	VQGSVRARLLGIPLLRLDATFALMPAAISPSPSPLGAGKGLADAVRCINDGAEVL
Ga0308204_102299782	3300031092	Soil	FSSPAVSAGNGLAEAVRSINEGADVLAQVRQDGRR
Ga0299913_104150441	3300031229	Soil	ARLLGIPLLRLDATVVLMPAITASSATVVAGNGLAEAVRSINDGAAVLAQVRRDGRH
Ga0310813_101556521	3300031716	Soil	TVVLMPAAITAPSSALAAGNGLAEAVRSINDGAEVLSQLRRNGRR
Ga0310813_121222032	3300031716	Soil	LMPAAITAPSSALAAGNGLAEAVRSINDGAEVLAQLRRNGRR
Ga0310885_106964321	3300031943	Soil	LHPSRRLSEGGLVQASVRARLFGIPLLRLDATIALMPGAVTPSSSAVATGDGLAEAVRSINEGAEILAQVRRNGRR
Ga0307415_1004331523	3300032126	Rhizosphere	PAAITAPSSALAAGNGLAEAVRSINDGAEVLAQVRRNGHR
Ga0307415_1006840522	3300032126	Rhizosphere	MPAAISASPSPLDAGKGLADAVRCINDGAEVLAEVRQNNGH